-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1036

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g41493.t1
Valid prediction for GlimmerHMM_glimmerT_62419-T1
Couldn't classify 2768, 3217
Sorry, prediction snap_scaffold_1036-snap.1-T1 fails validation.
(ATG)	 GC	535-565	GT	ACG
(TTA)	 AG	2522-2628	GT	CGG
(AGT)	 AG	2768-3217	GT	AGG
-recovered snap_scaffold_1036-snap.1-T1, initial, 535, 565
-recovered snap_scaffold_1036-snap.1-T1, internal, 2522, 2628
-recovered snap_scaffold_1036-snap.1-T1, internal, 2768, 3217

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3505
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support