-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_9425672-9661816

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_10-snap.1863-T1
Valid prediction for Augustus_model.g17255.t1
Valid prediction for GlimmerHMM_glimmerT_25711-T1
Valid prediction for CodingQuarry_transcript_5527-T1
Valid prediction for CodingQuarry_transcript_5522-T1
Valid prediction for snap_scaffold_10-snap.1868-T1
Valid prediction for snap_scaffold_10-snap.1833-T1
Valid prediction for GlimmerHMM_glimmerT_25715-T1
Valid prediction for GlimmerHMM_glimmerT_25718-T1
Valid prediction for GlimmerHMM_glimmerT_25714-T1
Valid prediction for GeneMark_model.43995_t
Valid prediction for GeneMark_model.43991_t
Valid prediction for GeneMark_model.43977_t
Valid prediction for snap_scaffold_10-snap.1848-T1
Valid prediction for GeneMark_model.43988_t
Valid prediction for GeneMark_model.43954_t
Valid prediction for Augustus_model.g17266.t1
Valid prediction for GeneMark_model.43961_t
Valid prediction for snap_scaffold_10-snap.1847-T1
Valid prediction for snap_scaffold_10-snap.1859-T1
Couldn't classify 125005, 125113
Sorry, prediction pasa_asmbl_4681.p1 fails validation.
(AGT)	 CG	125005-125113	GT	AGG
(CCT)	 AG	126057-126985	GT	AGG
(GAA)	 AG	129142-129190	GT	AGG
(ACC)	 AG	129326-129442	GT	AGG
(GGA)	 AG	129703-129749	GT	AGG
(GAG)	 AG	131428-131457	AC	AGA
-recovered pasa_asmbl_4681.p1, terminal, 131428, 131457
-recovered pasa_asmbl_4681.p1, internal, 126057, 126985
-recovered pasa_asmbl_4681.p1, internal, 129142, 129190
-recovered pasa_asmbl_4681.p1, internal, 129326, 129442
-recovered pasa_asmbl_4681.p1, internal, 129703, 129749
Couldn't classify 51746, 51796
Sorry, prediction pasa_asmbl_4664.p1 fails validation.
(ATG)	 AA	49431-49528	GT	CAG
(GAA)	 AG	50830-50913	GT	AGG
(AAC)	 AG	51420-51540	GT	AAG
(GCG)	 AG	51746-51796	AT	AGA
-recovered pasa_asmbl_4664.p1, initial, 49431, 49528
-recovered pasa_asmbl_4664.p1, internal, 50830, 50913
-recovered pasa_asmbl_4664.p1, internal, 51420, 51540
Valid prediction for GlimmerHMM_glimmerT_25702-T1
Valid prediction for GeneMark_model.43987_t
Valid prediction for GeneMark_model.43986_t
Valid prediction for GeneMark_model.43984_t
Valid prediction for GlimmerHMM_glimmerT_25708-T1
Valid prediction for GeneMark_model.43981_t
Valid prediction for GlimmerHMM_glimmerT_25712-T1
Valid prediction for GlimmerHMM_glimmerT_25710-T1
Valid prediction for pasa_asmbl_4680.p1
Valid prediction for snap_scaffold_10-snap.1860-T1
Valid prediction for GeneMark_model.43966_t
Valid prediction for GeneMark_model.43971_t
Valid prediction for snap_scaffold_10-snap.1857-T1
Valid prediction for pasa_asmbl_4659.p1
Valid prediction for Augustus_model.g17258.t1
Valid prediction for GlimmerHMM_glimmerT_25720-T1
Valid prediction for snap_scaffold_10-snap.1842-T1
Valid prediction for Augustus_model.g17270.t1
Valid prediction for GeneMark_model.43957_t
Valid prediction for GeneMark_model.43980_t
Valid prediction for snap_scaffold_10-snap.1870-T1
Valid prediction for GlimmerHMM_glimmerT_25719-T1
Valid prediction for GeneMark_model.43963_t
Valid prediction for GeneMark_model.43990_t
Valid prediction for GlimmerHMM_glimmerT_25703-T1
Couldn't classify 68171, 68252
Couldn't classify 70738, 70871
Sorry, prediction pasa_asmbl_4667.p1 fails validation.
(CCT)	 GT	68171-68252	GT	CAG
(ACG)	 AG	68347-68531	GT	TGG
(GTG)	 AG	69467-69593	GT	GGG
(GCT)	 AG	69685-69788	GT	AGG
(GAG)	 AG	69949-70103	GT	CGG
(GTT)	 AG	70384-70523	GT	AGG
(GCA)	 AG	70738-70871	GA	AGG
-recovered pasa_asmbl_4667.p1, internal, 68347, 68531
-recovered pasa_asmbl_4667.p1, internal, 69467, 69593
-recovered pasa_asmbl_4667.p1, internal, 69685, 69788
-recovered pasa_asmbl_4667.p1, internal, 69949, 70103
-recovered pasa_asmbl_4667.p1, internal, 70384, 70523
Valid prediction for GeneMark_model.43970_t
Valid prediction for GeneMark_model.43994_t
Valid prediction for snap_scaffold_10-snap.1840-T1
Valid prediction for GeneMark_model.43965_t
Valid prediction for GlimmerHMM_glimmerT_25721-T1
Valid prediction for Augustus_model.g17268.t1
Valid prediction for GlimmerHMM_glimmerT_25709-T1
Valid prediction for CodingQuarry_transcript_5525-T1
Valid prediction for snap_scaffold_10-snap.1839-T1
Couldn't classify 66835, 66921
Couldn't classify 67816, 67989
Sorry, prediction pasa_asmbl_4666.p1 fails validation.
(GAA)	 AG	66835-66921	GT	AGG
(GAA)	 AG	66999-67121	GT	AGG
(GAG)	 AG	67222-67429	GT	TGG
(GAG)	 AG	67561-67706	GT	AGG
(GTT)	 AG	67816-67989	GC	CCG
-recovered pasa_asmbl_4666.p1, internal, 66835, 66921
-recovered pasa_asmbl_4666.p1, internal, 66999, 67121
-recovered pasa_asmbl_4666.p1, internal, 67222, 67429
-recovered pasa_asmbl_4666.p1, internal, 67561, 67706
-recovered pasa_asmbl_4666.p1, internal, 67816, 67989
Valid prediction for snap_scaffold_10-snap.1869-T1
Valid prediction for Augustus_model.g17256.t1
Valid prediction for GlimmerHMM_glimmerT_25701-T1
Valid prediction for Augustus_model.g17262.t1
Couldn't classify 71831, 71910
Sorry, prediction pasa_asmbl_4670.p1 fails validation.
(GAC)	 GT	71831-71910	GT	CAG
(CTG)	 AG	72449-72563	GT	AGG
(ACA)	 AG	72755-72968	GT	CGG
(CGG)	 AG	73681-73885	GT	AGG
(GAT)	 AG	73996-74158	GT	AGG
(GTG)	 AG	74623-74783	GT	CTG
(CCT)	 AG	74888-75101	AG	GAA
-recovered pasa_asmbl_4670.p1, terminal, 74888, 75101
-recovered pasa_asmbl_4670.p1, internal, 72449, 72563
-recovered pasa_asmbl_4670.p1, internal, 72755, 72968
-recovered pasa_asmbl_4670.p1, internal, 73681, 73885
-recovered pasa_asmbl_4670.p1, internal, 73996, 74158
-recovered pasa_asmbl_4670.p1, internal, 74623, 74783
Valid prediction for GlimmerHMM_glimmerT_25705-T1
Valid prediction for snap_scaffold_10-snap.1865-T1
Valid prediction for snap_scaffold_10-snap.1851-T1
Valid prediction for GeneMark_model.43960_t
Valid prediction for snap_scaffold_10-snap.1837-T1
Valid prediction for GeneMark_model.43979_t
Valid prediction for Augustus_model.g17267.t1
Couldn't classify 71133, 71255
Couldn't classify 71675, 71707
Sorry, prediction pasa_asmbl_4669.p1 fails validation.
(GCA)	 GA	71133-71255	GT	CGG
(TTG)	 AG	71384-71539	GT	TGG
(TCC)	 AG	71675-71707	CA	CCC
-recovered pasa_asmbl_4669.p1, internal, 71384, 71539
Valid prediction for HiQ_model.g17264.t1
Valid prediction for GeneMark_model.43997_t
Valid prediction for snap_scaffold_10-snap.1849-T1
Valid prediction for GlimmerHMM_glimmerT_25707-T1
Valid prediction for GeneMark_model.43967_t
Valid prediction for GlimmerHMM_glimmerT_25723-T1
Valid prediction for CodingQuarry_transcript_5524-T1
Valid prediction for snap_scaffold_10-snap.1834-T1
Couldn't classify 63316, 63453
Couldn't classify 64481, 64726
Sorry, prediction pasa_asmbl_4665.p1 fails validation.
(GCC)	 TA	63316-63453	GT	AGG
(GTG)	 AG	63715-63831	GT	AGG
(ATG)	 AG	64029-64151	GT	TGG
(GCC)	 AG	64481-64726	AC	AGA
-recovered pasa_asmbl_4665.p1, initial, 64029, 64151
-recovered pasa_asmbl_4665.p1, internal, 63715, 63831
-recovered pasa_asmbl_4665.p1, internal, 64029, 64151
Valid prediction for snap_scaffold_10-snap.1855-T1
Valid prediction for CodingQuarry_transcript_5523-T1
Valid prediction for GeneMark_model.43975_t
Valid prediction for Augustus_model.g17259.t1
Valid prediction for Augustus_model.g17254.t1
Valid prediction for Augustus_model.g17269.t1
Valid prediction for GeneMark_model.43968_t
Valid prediction for GeneMark_model.43973_t
Couldn't classify 57675, 57749
Couldn't classify 58740, 58806
Sorry, prediction pasa_asmbl_5085.p1 fails validation.
(CTG)	 AC	57675-57749	GT	GGG
(CAC)	 AG	57980-58119	GT	CGG
(GTT)	 AG	58282-58345	GT	GGG
(CGG)	 AG	58538-58638	GT	AGG
(GTT)	 AG	58740-58806	GA	GGG
-recovered pasa_asmbl_5085.p1, internal, 57980, 58119
-recovered pasa_asmbl_5085.p1, internal, 58282, 58345
-recovered pasa_asmbl_5085.p1, internal, 58538, 58638
Valid prediction for Augustus_model.g17260.t1
Valid prediction for GlimmerHMM_glimmerT_25722-T1
Valid prediction for Augustus_model.g17263.t1
Valid prediction for snap_scaffold_10-snap.1836-T1
Valid prediction for GlimmerHMM_glimmerT_25704-T1
Valid prediction for CodingQuarry_transcript_5526-T1
Valid prediction for GeneMark_model.43998_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.43976_t
Couldn't classify 102099, 102193
Sorry, prediction pasa_asmbl_4099.p1 fails validation.
(ATG)	 AA	98640-98801	GT	GGG
(ATG)	 AG	99130-99274	GT	CGG
(TGA)	 AG	100089-100219	GT	AGG
(GCC)	 AG	100402-100522	GT	GGG
(AGA)	 AG	101602-101757	GT	CGG
(AGT)	 AG	102099-102193	CA	CTC
-recovered pasa_asmbl_4099.p1, initial, 98640, 98801
-recovered pasa_asmbl_4099.p1, initial, 99130, 99274
-recovered pasa_asmbl_4099.p1, internal, 99130, 99274
-recovered pasa_asmbl_4099.p1, internal, 100089, 100219
-recovered pasa_asmbl_4099.p1, internal, 100402, 100522
-recovered pasa_asmbl_4099.p1, internal, 101602, 101757
Valid prediction for GeneMark_model.43982_t
Valid prediction for GeneMark_model.43962_t
Valid prediction for Augustus_model.g17261.t1
Valid prediction for GeneMark_model.43972_t
Valid prediction for snap_scaffold_10-snap.1862-T1
Valid prediction for GeneMark_model.43959_t
Valid prediction for snap_scaffold_10-snap.1867-T1
Valid prediction for GeneMark_model.43956_t
Valid prediction for GeneMark_model.43955_t
Valid prediction for snap_scaffold_10-snap.1835-T1
Valid prediction for snap_scaffold_10-snap.1843-T1
Valid prediction for GeneMark_model.43958_t
Valid prediction for CodingQuarry_transcript_5521-T1
Valid prediction for snap_scaffold_10-snap.1838-T1
Valid prediction for snap_scaffold_10-snap.1856-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_10-snap.1841-T1
Valid prediction for snap_scaffold_10-snap.1852-T1
Valid prediction for snap_scaffold_10-snap.1858-T1
Valid prediction for pasa_asmbl_3599.p1
Valid prediction for GeneMark_model.43964_t
Valid prediction for snap_scaffold_10-snap.1845-T1
Valid prediction for snap_scaffold_10-snap.1832-T1
Valid prediction for snap_scaffold_10-snap.1853-T1
Valid prediction for snap_scaffold_10-snap.1866-T1
Valid prediction for GeneMark_model.43996_t
Valid prediction for GeneMark_model.43974_t
Valid prediction for snap_scaffold_10-snap.1864-T1
Valid prediction for GeneMark_model.43969_t
Valid prediction for Augustus_model.g17257.t1
Valid prediction for GlimmerHMM_glimmerT_25706-T1
Valid prediction for snap_scaffold_10-snap.1861-T1
Valid prediction for snap_scaffold_10-snap.1850-T1
Valid prediction for Augustus_model.g17265.t1
Valid prediction for snap_scaffold_10-snap.1854-T1
Valid prediction for CodingQuarry_transcript_5520-T1
Valid prediction for GlimmerHMM_glimmerT_25716-T1
Valid prediction for GeneMark_model.43993_t
Valid prediction for GeneMark_model.43978_t
Valid prediction for snap_scaffold_10-snap.1844-T1
Valid prediction for HiQ_model.g17253.t1
Valid prediction for GeneMark_model.43985_t
Valid prediction for snap_scaffold_10-snap.1846-T1
Valid prediction for snap_scaffold_10-snap.1871-T1
Valid prediction for GlimmerHMM_glimmerT_25713-T1
Valid prediction for GlimmerHMM_glimmerT_25717-T1
Valid prediction for GlimmerHMM_glimmerT_25700-T1
Valid prediction for GeneMark_model.43992_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 34820, rend_intergenic: 23656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36647, rend_intergenic: 36184  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44240, rend_intergenic: 36904  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75751, rend_intergenic: 49798  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90550, rend_intergenic: 83099  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108196, rend_intergenic: 101843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127003, rend_intergenic: 109208  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158892, rend_intergenic: 142183  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193713, rend_intergenic: 179917  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 236145
-exon list size: 723


building trellis

0.1    
0.3    
0.4    
0.6    
0.7    
0.8    
1.0    
1.1    
1.2    
1.4    
1.5    
1.7    
1.8    
1.9    
2.1    
2.2    
2.3    
2.5    
2.6    
2.8    
2.9    
3.0    
3.2    
3.3    
3.4    
3.6    
3.7    
3.9    
4.0    
4.1    
4.3    
4.4    
4.6    
4.7    
4.8    
5.0    
5.1    
5.2    
5.4    
5.5    
5.7    
5.8    
5.9    
6.1    
6.2    
6.3    
6.5    
6.6    
6.8    
6.9    
7.0    
7.2    
7.3    
7.4    
7.6    
7.7    
7.9    
8.0    
8.1    
8.3    
8.4    
8.6    
8.7    
8.8    
9.0    
9.1    
9.2    
9.4    
9.5    
9.7    
9.8    
9.9    
10.1    
10.2    
10.3    
10.5    
10.6    
10.8    
10.9    
11.0    
11.2    
11.3    
11.4    
11.6    
11.7    
11.9    
12.0    
12.1    
12.3    
12.4    
12.6    
12.7    
12.8    
13.0    
13.1    
13.2    
13.4    
13.5    
13.7    
13.8    
13.9    
14.1    
14.2    
14.3    
14.5    
14.6    
14.8    
14.9    
15.0    
15.2    
15.3    
15.4    
15.6    
15.7    
15.9    
16.0    
16.1    
16.3    
16.4    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.4    
17.5    
17.7    
17.8    
17.9    
18.1    
18.2    
18.3    
18.5    
18.6    
18.8    
18.9    
19.0    
19.2    
19.3    
19.4    
19.6    
19.7    
19.9    
20.0    
20.1    
20.3    
20.4    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.4    
21.5    
21.7    
21.8    
21.9    
22.1    
22.2    
22.3    
22.5    
22.6    
22.8    
22.9    
23.0    
23.2    
23.3    
23.4    
23.6    
23.7    
23.9    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.8    
25.0    
25.1    
25.2    
25.4    
25.5    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.5    
26.6    
26.8    
26.9    
27.0    
27.2    
27.3    
27.4    
27.6    
27.7    
27.9    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.2    
29.4    
29.5    
29.7    
29.8    
29.9    
30.1    
30.2    
30.3    
30.5    
30.6    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.1    
32.3    
32.4    
32.6    
32.7    
32.8    
33.0    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.5    
34.6    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.6    
35.7    
35.9    
36.0    
36.1    
36.3    
36.4    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.4    
37.5    
37.7    
37.8    
37.9    
38.1    
38.2    
38.3    
38.5    
38.6    
38.8    
38.9    
39.0    
39.2    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.1    
40.3    
40.4    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.4    
41.5    
41.7    
41.8    
41.9    
42.1    
42.2    
42.3    
42.5    
42.6    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.6    
43.7    
43.9    
44.0    
44.1    
44.3    
44.4    
44.6    
44.7    
44.8    
45.0    
45.1    
45.2    
45.4    
45.5    
45.7    
45.8    
45.9    
46.1    
46.2    
46.3    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.5    
54.6    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.1    
56.3    
56.4    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.4    
61.5    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.4    
69.5    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.5    
70.6    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.1    
72.3    
72.4    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.4    
77.5    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.5    
78.6    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.6    
88.7    
88.8    
89.0    
89.1    
89.2    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.6    
91.7    
91.9    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.4    
93.5    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 28 predictions from path traversal
Error with prediction: snap lend_intergenic: 34820, rend_intergenic: 23656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36647, rend_intergenic: 36184  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44240, rend_intergenic: 36904  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75751, rend_intergenic: 49798  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90550, rend_intergenic: 83099  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108196, rend_intergenic: 101843  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127003, rend_intergenic: 109208  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158892, rend_intergenic: 142183  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193713, rend_intergenic: 179917  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 220853 - 236145
-exon list size: 25


building trellis

3.7    
7.4    
11.1    
14.8    
18.5    
22.2    
25.9    
29.6    
33.3    
37.0    
40.7    
44.4    
48.1    
51.9    
55.6    
59.3    
63.0    
66.7    
70.4    
74.1    
77.8    
81.5    
85.2    
88.9    
92.6    
96.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 224942 - 236145
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 225982 - 236145
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support