-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_6444210-6660177 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_10-snap.1366-T1 Valid prediction for snap_scaffold_10-snap.1356-T1 Valid prediction for Augustus_model.g17032.t1 Valid prediction for GeneMark_model.43399_t Valid prediction for GeneMark_model.43402_t Valid prediction for GeneMark_model.43370_t Valid prediction for GeneMark_model.43353_t Valid prediction for Augustus_model.g17042.t1 Valid prediction for GeneMark_model.43385_t Valid prediction for GeneMark_model.43372_t Valid prediction for GeneMark_model.43394_t Valid prediction for HiQ_model.g17051.t1 Valid prediction for Augustus_model.g17049.t1 Valid prediction for GlimmerHMM_glimmerT_25397-T1 Valid prediction for GeneMark_model.43404_t Valid prediction for snap_scaffold_10-snap.1361-T1 Valid prediction for GeneMark_model.43403_t Valid prediction for snap_scaffold_10-snap.1362-T1 Valid prediction for GeneMark_model.43350_t Valid prediction for GlimmerHMM_glimmerT_25406-T1 Valid prediction for snap_scaffold_10-snap.1348-T1 Valid prediction for snap_scaffold_10-snap.1359-T1 Valid prediction for pasa_asmbl_4525.p1 Valid prediction for snap_scaffold_10-snap.1332-T1 Valid prediction for GlimmerHMM_glimmerT_25392-T1 Valid prediction for Augustus_model.g17040.t1 Valid prediction for GeneMark_model.43361_t Valid prediction for snap_scaffold_10-snap.1357-T1 Valid prediction for Augustus_model.g17041.t1 Valid prediction for snap_scaffold_10-snap.1336-T1 Valid prediction for GlimmerHMM_glimmerT_25393-T1 Valid prediction for GeneMark_model.43376_t Valid prediction for GeneMark_model.43378_t Valid prediction for GeneMark_model.43392_t Valid prediction for GlimmerHMM_glimmerT_25384-T1 Valid prediction for GeneMark_model.43374_t Valid prediction for Augustus_model.g17045.t1 Valid prediction for snap_scaffold_10-snap.1340-T1 Valid prediction for snap_scaffold_10-snap.1345-T1 Valid prediction for snap_scaffold_10-snap.1335-T1 Valid prediction for GeneMark_model.43349_t Valid prediction for GeneMark_model.43397_t Valid prediction for GeneMark_model.43386_t Valid prediction for GlimmerHMM_glimmerT_25383-T1 Valid prediction for CodingQuarry_transcript_5437-T1 Valid prediction for GeneMark_model.43383_t Valid prediction for GeneMark_model.43401_t Valid prediction for snap_scaffold_10-snap.1364-T1 Valid prediction for CodingQuarry_transcript_5436-T1 Valid prediction for GeneMark_model.43368_t Valid prediction for GeneMark_model.43357_t Valid prediction for GeneMark_model.43355_t Valid prediction for GeneMark_model.43365_t Valid prediction for snap_scaffold_10-snap.1344-T1 Couldn't classify 172119, 172206 Sorry, prediction pasa_asmbl_4521.p1 fails validation. (ATG) AG 170869-171041 GT CAG (AGT) AG 171472-171605 GT AGG (GTC) AG 171708-171780 GT AGG (GGG) AG 171866-171982 GT ACG (AGG) AG 172119-172206 GG TTG -recovered pasa_asmbl_4521.p1, initial, 170869, 171041 -recovered pasa_asmbl_4521.p1, internal, 170869, 171041 -recovered pasa_asmbl_4521.p1, internal, 171472, 171605 -recovered pasa_asmbl_4521.p1, internal, 171708, 171780 -recovered pasa_asmbl_4521.p1, internal, 171866, 171982 Valid prediction for HiQ_model.g17053.t1 Valid prediction for snap_scaffold_10-snap.1354-T1 Valid prediction for GlimmerHMM_glimmerT_25396-T1 Valid prediction for snap_scaffold_10-snap.1368-T1 Valid prediction for GeneMark_model.43405_t Valid prediction for GeneMark_model.43388_t Couldn't classify 197115, 197310 Sorry, prediction pasa_asmbl_4526.p1 fails validation. (ACT) AG 197115-197310 GT AGG (GGA) AG 197473-197605 GT ATG (AGC) AG 197708-197794 GT AAG (AAC) AG 197924-197939 AG AAA -recovered pasa_asmbl_4526.p1, terminal, 197924, 197939 -recovered pasa_asmbl_4526.p1, internal, 197115, 197310 -recovered pasa_asmbl_4526.p1, internal, 197473, 197605 -recovered pasa_asmbl_4526.p1, internal, 197708, 197794 Valid prediction for Augustus_model.g17046.t1 Valid prediction for GeneMark_model.43354_t Valid prediction for snap_scaffold_10-snap.1342-T1 Valid prediction for Augustus_model.g17039.t1 Couldn't classify 180015, 180093 Sorry, prediction pasa_asmbl_4524.p1 fails validation. (CGA) GT 180015-180093 GT CGG (TTC) AG 180288-180391 GT TGG (GTT) AG 180474-180550 GT AGG (GTA) AG 180711-180796 GT AGG (GGG) AG 180989-181044 GT AGG (GTG) AG 181142-181286 GT AGG (GCC) AG 181414-181524 GT CTG (TGC) AG 181661-181757 GT GGG (GTA) AG 182181-182311 GT TTG (TCG) AG 182394-182475 GT AGG (GGT) AG 182568-182699 GT AAG (GAT) AG 182839-183004 GG AGG -recovered pasa_asmbl_4524.p1, terminal, 182839, 183004 -recovered pasa_asmbl_4524.p1, internal, 180288, 180391 -recovered pasa_asmbl_4524.p1, internal, 180474, 180550 -recovered pasa_asmbl_4524.p1, internal, 180711, 180796 -recovered pasa_asmbl_4524.p1, internal, 180989, 181044 -recovered pasa_asmbl_4524.p1, internal, 181142, 181286 -recovered pasa_asmbl_4524.p1, internal, 181414, 181524 -recovered pasa_asmbl_4524.p1, internal, 181661, 181757 -recovered pasa_asmbl_4524.p1, internal, 182181, 182311 -recovered pasa_asmbl_4524.p1, internal, 182394, 182475 -recovered pasa_asmbl_4524.p1, internal, 182568, 182699 Valid prediction for GeneMark_model.43390_t Valid prediction for GlimmerHMM_glimmerT_25389-T1 Valid prediction for GlimmerHMM_glimmerT_25404-T1 Valid prediction for HiQ_model.g17054.t1 Valid prediction for snap_scaffold_10-snap.1334-T1 Valid prediction for GeneMark_model.43382_t Valid prediction for snap_scaffold_10-snap.1352-T1 Valid prediction for snap_scaffold_10-snap.1337-T1 Valid prediction for snap_scaffold_10-snap.1367-T1 Valid prediction for CodingQuarry_transcript_5438-T1 Valid prediction for GlimmerHMM_glimmerT_25402-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g17050.t1 Valid prediction for GlimmerHMM_glimmerT_25405-T1 Valid prediction for snap_scaffold_10-snap.1351-T1 Valid prediction for snap_scaffold_10-snap.1355-T1 Valid prediction for GeneMark_model.43358_t Couldn't classify 133867, 134088 Sorry, prediction pasa_asmbl_3391.p1 fails validation. (ATG) CG 133304-133774 GT AGG (AAG) AG 133867-134088 GG GTG -recovered pasa_asmbl_3391.p1, initial, 133304, 133774 Couldn't classify 49641, 49685 Sorry, prediction pasa_asmbl_3396.p1 fails validation. (GTT) AG 49641-49685 GT GGG (TTC) AG 49812-49879 GT AGG (GGG) AG 49978-50056 GT TGG (GTG) AG 50174-50254 GT AGG (GTG) AG 50398-50475 GT AGG (AAA) AG 50610-50791 GT AGG (TCG) AG 50912-51017 GT ATG (AGG) AG 51140-51229 GT AGG (TTT) AG 51316-51396 GT AGG (AGG) AG 51499-51627 GT AGG (GCG) AG 51758-51809 GT CAG (GTT) AG 52033-52096 GT TTG (GCA) AG 52183-52252 GT AGG (GAT) AG 52375-52446 GT AGG (CGC) AG 52539-52662 GT AGG (AGA) AG 53097-53290 GT TGG (GTG) AG 53516-53643 GT AGG (GGA) AG 53731-53818 GT AGG (GAG) AG 53912-54006 GT ACG (GAT) AG 54257-54368 CC GAC -recovered pasa_asmbl_3396.p1, terminal, 54257, 54368 -recovered pasa_asmbl_3396.p1, internal, 49641, 49685 -recovered pasa_asmbl_3396.p1, internal, 49812, 49879 -recovered pasa_asmbl_3396.p1, internal, 49978, 50056 -recovered pasa_asmbl_3396.p1, internal, 50174, 50254 -recovered pasa_asmbl_3396.p1, internal, 50398, 50475 -recovered pasa_asmbl_3396.p1, internal, 50610, 50791 -recovered pasa_asmbl_3396.p1, internal, 50912, 51017 -recovered pasa_asmbl_3396.p1, internal, 51140, 51229 -recovered pasa_asmbl_3396.p1, internal, 51316, 51396 -recovered pasa_asmbl_3396.p1, internal, 51499, 51627 -recovered pasa_asmbl_3396.p1, internal, 51758, 51809 -recovered pasa_asmbl_3396.p1, internal, 52033, 52096 -recovered pasa_asmbl_3396.p1, internal, 52183, 52252 -recovered pasa_asmbl_3396.p1, internal, 52375, 52446 -recovered pasa_asmbl_3396.p1, internal, 52539, 52662 -recovered pasa_asmbl_3396.p1, internal, 53097, 53290 -recovered pasa_asmbl_3396.p1, internal, 53516, 53643 -recovered pasa_asmbl_3396.p1, internal, 53731, 53818 -recovered pasa_asmbl_3396.p1, internal, 53912, 54006 Valid prediction for GeneMark_model.43384_t Valid prediction for snap_scaffold_10-snap.1338-T1 Valid prediction for GeneMark_model.43387_t Valid prediction for snap_scaffold_10-snap.1339-T1 Couldn't classify 159572, 159661 Sorry, prediction pasa_asmbl_3389.p1 fails validation. (CCA) AG 159572-159661 GT ATG (GAC) AG 159747-159864 GT AGG (AGC) AG 160051-160703 GG AGG -recovered pasa_asmbl_3389.p1, terminal, 160051, 160703 -recovered pasa_asmbl_3389.p1, internal, 159572, 159661 -recovered pasa_asmbl_3389.p1, internal, 159747, 159864 Valid prediction for snap_scaffold_10-snap.1347-T1 Valid prediction for snap_scaffold_10-snap.1360-T1 Valid prediction for GeneMark_model.43367_t Valid prediction for Augustus_model.g17038.t1 Valid prediction for GeneMark_model.43360_t Valid prediction for GlimmerHMM_glimmerT_25387-T1 Valid prediction for GlimmerHMM_glimmerT_25385-T1 Valid prediction for GeneMark_model.43369_t Valid prediction for GeneMark_model.43375_t Valid prediction for GlimmerHMM_glimmerT_25401-T1 Valid prediction for GeneMark_model.43352_t Valid prediction for snap_scaffold_10-snap.1330-T1 Valid prediction for GlimmerHMM_glimmerT_25399-T1 Valid prediction for GlimmerHMM_glimmerT_25400-T1 Valid prediction for GeneMark_model.43348_t Valid prediction for Augustus_model.g17035.t1 Valid prediction for GeneMark_model.43377_t Valid prediction for Augustus_model.g17052.t1 Couldn't classify 164582, 164601 Couldn't classify 165270, 165390 Sorry, prediction pasa_asmbl_3388.p1 fails validation. (CAG) TA 164582-164601 GT AGG (GGA) AG 164681-164870 GT TGG (ACA) AG 165053-165150 GT AGG (TGG) AG 165270-165390 AG CCA -recovered pasa_asmbl_3388.p1, internal, 164681, 164870 -recovered pasa_asmbl_3388.p1, internal, 165053, 165150 Valid prediction for HiQ_model.g17031.t1 Valid prediction for GeneMark_model.43396_t Valid prediction for GeneMark_model.43356_t Couldn't classify 165553, 165685 Sorry, prediction pasa_asmbl_3387.p1 fails validation. (TTG) TC 165553-165685 GT AGG (GCT) AG 166030-166159 GT GAG (GTA) AG 166260-166452 GT CTG (GTT) AG 166577-166710 GT AGG (TGA) AG 166804-166906 CA GAC -recovered pasa_asmbl_3387.p1, terminal, 166804, 166906 -recovered pasa_asmbl_3387.p1, internal, 166030, 166159 -recovered pasa_asmbl_3387.p1, internal, 166260, 166452 -recovered pasa_asmbl_3387.p1, internal, 166577, 166710 Valid prediction for Augustus_model.g17044.t1 Valid prediction for GeneMark_model.43389_t Couldn't classify 148451, 148486 Couldn't classify 151713, 151748 Sorry, prediction pasa_asmbl_3390.p1 fails validation. (GGT) TA 148451-148486 GT AGG (GCC) AG 149527-149658 GT GGG (AAG) AG 149911-150081 GT ACG (GCC) AG 151713-151748 GT CGG -recovered pasa_asmbl_3390.p1, internal, 149527, 149658 -recovered pasa_asmbl_3390.p1, internal, 149911, 150081 -recovered pasa_asmbl_3390.p1, internal, 151713, 151748 Valid prediction for GeneMark_model.43379_t Valid prediction for Augustus_model.g17036.t1 Valid prediction for GlimmerHMM_glimmerT_25390-T1 Valid prediction for GeneMark_model.43362_t Valid prediction for snap_scaffold_10-snap.1350-T1 Valid prediction for snap_scaffold_10-snap.1343-T1 Valid prediction for GlimmerHMM_glimmerT_25386-T1 Valid prediction for snap_scaffold_10-snap.1341-T1 Valid prediction for snap_scaffold_10-snap.1349-T1 Valid prediction for GeneMark_model.43363_t Valid prediction for GlimmerHMM_glimmerT_25388-T1 Valid prediction for GeneMark_model.43381_t Couldn't classify 57006, 57053 Sorry, prediction pasa_asmbl_3394.p1 fails validation. (TGC) GT 57006-57053 GT TGG (GCT) AG 58163-58306 GT AGG (AAC) AG 58582-58671 GT TGG (CCT) AG 58978-59102 GT AGG (TGC) AG 59535-59640 GT AGG (GGG) AG 59768-59878 GT GGG (GTG) AG 59964-60925 GT AAG (GAA) AG 61112-61208 GT AGG (ACA) AG 61897-61966 GT GGG (GTC) AG 62126-62204 GT AGG (GGT) AG 62303-62453 GT AGG (ACT) AG 62657-62864 GT AGG (GTA) AG 63015-63238 TG GAT -recovered pasa_asmbl_3394.p1, terminal, 63015, 63238 -recovered pasa_asmbl_3394.p1, internal, 58163, 58306 -recovered pasa_asmbl_3394.p1, internal, 58582, 58671 -recovered pasa_asmbl_3394.p1, internal, 58978, 59102 -recovered pasa_asmbl_3394.p1, internal, 59535, 59640 -recovered pasa_asmbl_3394.p1, internal, 59768, 59878 -recovered pasa_asmbl_3394.p1, internal, 59964, 60925 -recovered pasa_asmbl_3394.p1, internal, 61112, 61208 -recovered pasa_asmbl_3394.p1, internal, 61897, 61966 -recovered pasa_asmbl_3394.p1, internal, 62126, 62204 -recovered pasa_asmbl_3394.p1, internal, 62303, 62453 -recovered pasa_asmbl_3394.p1, internal, 62657, 62864 Valid prediction for GeneMark_model.43373_t Couldn't classify 210319, 210499 Sorry, prediction pasa_asmbl_3376.p1 fails validation. (CCT) CC 210319-210499 GT AGG (CCT) AG 210734-210860 GT GAG (GGG) AG 211985-212151 GT AGG (GTG) AG 212436-212617 AG GAA -recovered pasa_asmbl_3376.p1, terminal, 212436, 212617 -recovered pasa_asmbl_3376.p1, internal, 210734, 210860 -recovered pasa_asmbl_3376.p1, internal, 211985, 212151 Valid prediction for GeneMark_model.43359_t Valid prediction for Augustus_model.g17047.t1 Valid prediction for Augustus_model.g17037.t1 Valid prediction for Augustus_model.g17034.t1 Valid prediction for GlimmerHMM_glimmerT_25382-T1 Valid prediction for GlimmerHMM_glimmerT_25403-T1 Valid prediction for GeneMark_model.43393_t Valid prediction for GeneMark_model.43351_t Valid prediction for GlimmerHMM_glimmerT_25391-T1 Valid prediction for Augustus_model.g17033.t1 Valid prediction for snap_scaffold_10-snap.1365-T1 Valid prediction for snap_scaffold_10-snap.1363-T1 Valid prediction for GeneMark_model.43366_t Valid prediction for GeneMark_model.43400_t Valid prediction for GeneMark_model.43398_t Valid prediction for GlimmerHMM_glimmerT_25395-T1 Valid prediction for GlimmerHMM_glimmerT_25394-T1 Valid prediction for snap_scaffold_10-snap.1358-T1 Valid prediction for GeneMark_model.43364_t Couldn't classify 47241, 47270 Couldn't classify 49542, 49547 Sorry, prediction pasa_asmbl_3397.p1 fails validation. (GCT) CA 47241-47270 GT AGG (GCA) AG 47356-47450 GT AGG (GGT) AG 47618-47729 GT AGG (TGT) AG 47999-48079 GT GGG (TTC) AG 48228-48350 GT AGG (GAC) AG 48449-48572 GT AGG (TCC) AG 48681-48784 GT TTG (GAG) AG 48963-49025 GT AGG (GCT) AG 49116-49192 GT GGG (CTG) AG 49298-49364 GT AAG (ACC) AG 49542-49547 GT CTG -recovered pasa_asmbl_3397.p1, internal, 47356, 47450 -recovered pasa_asmbl_3397.p1, internal, 47618, 47729 -recovered pasa_asmbl_3397.p1, internal, 47999, 48079 -recovered pasa_asmbl_3397.p1, internal, 48228, 48350 -recovered pasa_asmbl_3397.p1, internal, 48449, 48572 -recovered pasa_asmbl_3397.p1, internal, 48681, 48784 -recovered pasa_asmbl_3397.p1, internal, 48963, 49025 -recovered pasa_asmbl_3397.p1, internal, 49116, 49192 -recovered pasa_asmbl_3397.p1, internal, 49298, 49364 -recovered pasa_asmbl_3397.p1, internal, 49542, 49547 Couldn't classify 209279, 209374 Couldn't classify 209980, 210237 Sorry, prediction pasa_asmbl_3377.p1 fails validation. (GTC) GT 209279-209374 GT CAG (GGT) AG 209980-210237 CC CGC Valid prediction for snap_scaffold_10-snap.1369-T1 Valid prediction for GeneMark_model.43380_t Valid prediction for GeneMark_model.43395_t Valid prediction for GeneMark_model.43347_t Valid prediction for snap_scaffold_10-snap.1353-T1 Valid prediction for Augustus_model.g17043.t1 Valid prediction for snap_scaffold_10-snap.1346-T1 Couldn't classify 184404, 184599 Sorry, prediction pasa_asmbl_3380.p1 fails validation. (TGT) AT 184404-184599 GT TGG (ACA) AG 186110-186301 GT GGG (CCT) AG 188296-188457 GT GGG (GTG) AG 188589-188747 GT GGG (GTC) AG 190736-190836 GT AGG (GTG) AG 191050-191193 GT AGG (ATT) AG 191303-191462 GT TGG (ACA) AG 192427-192464 GT AGG (GTG) AG 192571-192702 GT AGG (GTG) AG 193522-193698 GT AGG (TTG) AG 193806-194102 AG AGA -recovered pasa_asmbl_3380.p1, terminal, 193806, 194102 -recovered pasa_asmbl_3380.p1, internal, 186110, 186301 -recovered pasa_asmbl_3380.p1, internal, 188296, 188457 -recovered pasa_asmbl_3380.p1, internal, 188589, 188747 -recovered pasa_asmbl_3380.p1, internal, 190736, 190836 -recovered pasa_asmbl_3380.p1, internal, 191050, 191193 -recovered pasa_asmbl_3380.p1, internal, 191303, 191462 -recovered pasa_asmbl_3380.p1, internal, 192427, 192464 -recovered pasa_asmbl_3380.p1, internal, 192571, 192702 -recovered pasa_asmbl_3380.p1, internal, 193522, 193698 Couldn't classify 38466, 38519 Couldn't classify 38648, 39025 Sorry, prediction pasa_asmbl_3401.p1 fails validation. (ATC) CA 38466-38519 GT AGG (GTG) AG 38648-39025 AC CGA Valid prediction for GlimmerHMM_glimmerT_25398-T1 Valid prediction for GeneMark_model.43391_t Valid prediction for HiQ_model.g17048.t1 Valid prediction for snap_scaffold_10-snap.1333-T1 Couldn't classify 169269, 169775 Sorry, prediction pasa_asmbl_3386.p1 fails validation. (ATG) CC 169269-169775 AC TGA Valid prediction for GeneMark_model.43346_t Valid prediction for GeneMark_model.43371_t Valid prediction for snap_scaffold_10-snap.1331-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 40167, rend_intergenic: 15636 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46770, rend_intergenic: 45094 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 54245, rend_intergenic: 48991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57934, rend_intergenic: 56649 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72064, rend_intergenic: 57977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73651, rend_intergenic: 72144 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82696, rend_intergenic: 78679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102163, rend_intergenic: 100350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122933, rend_intergenic: 102386 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 137051, rend_intergenic: 130402 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141647, rend_intergenic: 137694 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149470, rend_intergenic: 143947 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155396, rend_intergenic: 152731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158948, rend_intergenic: 156830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169599, rend_intergenic: 161853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212167, rend_intergenic: 210500 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 215968 -exon list size: 802 building trellis 0.1 0.2 0.4 0.5 0.6 0.7 0.9 1.0 1.1 1.2 1.4 1.5 1.6 1.7 1.9 2.0 2.1 2.2 2.4 2.5 2.6 2.7 2.9 3.0 3.1 3.2 3.4 3.5 3.6 3.7 3.9 4.0 4.1 4.2 4.4 4.5 4.6 4.7 4.9 5.0 5.1 5.2 5.3 5.5 5.6 5.7 5.8 6.0 6.1 6.2 6.3 6.5 6.6 6.7 6.8 7.0 7.1 7.2 7.3 7.5 7.6 7.7 7.8 8.0 8.1 8.2 8.3 8.5 8.6 8.7 8.8 9.0 9.1 9.2 9.3 9.5 9.6 9.7 9.8 10.0 10.1 10.2 10.3 10.4 10.6 10.7 10.8 10.9 11.1 11.2 11.3 11.4 11.6 11.7 11.8 11.9 12.1 12.2 12.3 12.4 12.6 12.7 12.8 12.9 13.1 13.2 13.3 13.4 13.6 13.7 13.8 13.9 14.1 14.2 14.3 14.4 14.6 14.7 14.8 14.9 15.0 15.2 15.3 15.4 15.5 15.7 15.8 15.9 16.0 16.2 16.3 16.4 16.5 16.7 16.8 16.9 17.0 17.2 17.3 17.4 17.5 17.7 17.8 17.9 18.0 18.2 18.3 18.4 18.5 18.7 18.8 18.9 19.0 19.2 19.3 19.4 19.5 19.7 19.8 19.9 20.0 20.1 20.3 20.4 20.5 20.6 20.8 20.9 21.0 21.1 21.3 21.4 21.5 21.6 21.8 21.9 22.0 22.1 22.3 22.4 22.5 22.6 22.8 22.9 23.0 23.1 23.3 23.4 23.5 23.6 23.8 23.9 24.0 24.1 24.3 24.4 24.5 24.6 24.8 24.9 25.0 25.1 25.2 25.4 25.5 25.6 25.7 25.9 26.0 26.1 26.2 26.4 26.5 26.6 26.7 26.9 27.0 27.1 27.2 27.4 27.5 27.6 27.7 27.9 28.0 28.1 28.2 28.4 28.5 28.6 28.7 28.9 29.0 29.1 29.2 29.4 29.5 29.6 29.7 29.9 30.0 30.1 30.2 30.3 30.5 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.5 31.6 31.7 31.8 32.0 32.1 32.2 32.3 32.5 32.6 32.7 32.8 33.0 33.1 33.2 33.3 33.5 33.6 33.7 33.8 34.0 34.1 34.2 34.3 34.5 34.6 34.7 34.8 35.0 35.1 35.2 35.3 35.4 35.6 35.7 35.8 35.9 36.1 36.2 36.3 36.4 36.6 36.7 36.8 36.9 37.1 37.2 37.3 37.4 37.6 37.7 37.8 37.9 38.1 38.2 38.3 38.4 38.6 38.7 38.8 38.9 39.1 39.2 39.3 39.4 39.6 39.7 39.8 39.9 40.0 40.2 40.3 40.4 40.5 40.7 40.8 40.9 41.0 41.2 41.3 41.4 41.5 41.7 41.8 41.9 42.0 42.2 42.3 42.4 42.5 42.7 42.8 42.9 43.0 43.2 43.3 43.4 43.5 43.7 43.8 43.9 44.0 44.2 44.3 44.4 44.5 44.7 44.8 44.9 45.0 45.1 45.3 45.4 45.5 45.6 45.8 45.9 46.0 46.1 46.3 46.4 46.5 46.6 46.8 46.9 47.0 47.1 47.3 47.4 47.5 47.6 47.8 47.9 48.0 48.1 48.3 48.4 48.5 48.6 48.8 48.9 49.0 49.1 49.3 49.4 49.5 49.6 49.8 49.9 50.0 50.1 50.2 50.4 50.5 50.6 50.7 50.9 51.0 51.1 51.2 51.4 51.5 51.6 51.7 51.9 52.0 52.1 52.2 52.4 52.5 52.6 52.7 52.9 53.0 53.1 53.2 53.4 53.5 53.6 53.7 53.9 54.0 54.1 54.2 54.4 54.5 54.6 54.7 54.9 55.0 55.1 55.2 55.3 55.5 55.6 55.7 55.8 56.0 56.1 56.2 56.3 56.5 56.6 56.7 56.8 57.0 57.1 57.2 57.3 57.5 57.6 57.7 57.8 58.0 58.1 58.2 58.3 58.5 58.6 58.7 58.8 59.0 59.1 59.2 59.3 59.5 59.6 59.7 59.8 60.0 60.1 60.2 60.3 60.4 60.6 60.7 60.8 60.9 61.1 61.2 61.3 61.4 61.6 61.7 61.8 61.9 62.1 62.2 62.3 62.4 62.6 62.7 62.8 62.9 63.1 63.2 63.3 63.4 63.6 63.7 63.8 63.9 64.1 64.2 64.3 64.4 64.6 64.7 64.8 64.9 65.0 65.2 65.3 65.4 65.5 65.7 65.8 65.9 66.0 66.2 66.3 66.4 66.5 66.7 66.8 66.9 67.0 67.2 67.3 67.4 67.5 67.7 67.8 67.9 68.0 68.2 68.3 68.4 68.5 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.5 69.7 69.8 69.9 70.0 70.1 70.3 70.4 70.5 70.6 70.8 70.9 71.0 71.1 71.3 71.4 71.5 71.6 71.8 71.9 72.0 72.1 72.3 72.4 72.5 72.6 72.8 72.9 73.0 73.1 73.3 73.4 73.5 73.6 73.8 73.9 74.0 74.1 74.3 74.4 74.5 74.6 74.8 74.9 75.0 75.1 75.2 75.4 75.5 75.6 75.7 75.9 76.0 76.1 76.2 76.4 76.5 76.6 76.7 76.9 77.0 77.1 77.2 77.4 77.5 77.6 77.7 77.9 78.0 78.1 78.2 78.4 78.5 78.6 78.7 78.9 79.0 79.1 79.2 79.4 79.5 79.6 79.7 79.9 80.0 80.1 80.2 80.3 80.5 80.6 80.7 80.8 81.0 81.1 81.2 81.3 81.5 81.6 81.7 81.8 82.0 82.1 82.2 82.3 82.5 82.6 82.7 82.8 83.0 83.1 83.2 83.3 83.5 83.6 83.7 83.8 84.0 84.1 84.2 84.3 84.5 84.6 84.7 84.8 85.0 85.1 85.2 85.3 85.4 85.6 85.7 85.8 85.9 86.1 86.2 86.3 86.4 86.6 86.7 86.8 86.9 87.1 87.2 87.3 87.4 87.6 87.7 87.8 87.9 88.1 88.2 88.3 88.4 88.6 88.7 88.8 88.9 89.1 89.2 89.3 89.4 89.6 89.7 89.8 89.9 90.0 90.2 90.3 90.4 90.5 90.7 90.8 90.9 91.0 91.2 91.3 91.4 91.5 91.7 91.8 91.9 92.0 92.2 92.3 92.4 92.5 92.7 92.8 92.9 93.0 93.2 93.3 93.4 93.5 93.7 93.8 93.9 94.0 94.2 94.3 94.4 94.5 94.7 94.8 94.9 95.0 95.1 95.3 95.4 95.5 95.6 95.8 95.9 96.0 96.1 96.3 96.4 96.5 96.6 96.8 96.9 97.0 97.1 97.3 97.4 97.5 97.6 97.8 97.9 98.0 98.1 98.3 98.4 98.5 98.6 98.8 98.9 99.0 99.1 99.3 99.4 99.5 99.6 99.8 99.9 -found 29 predictions from path traversal Error with prediction: snap lend_intergenic: 40167, rend_intergenic: 15636 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46770, rend_intergenic: 45094 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 54245, rend_intergenic: 48991 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 57934, rend_intergenic: 56649 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72064, rend_intergenic: 57977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73651, rend_intergenic: 72144 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82696, rend_intergenic: 78679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102163, rend_intergenic: 100350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122933, rend_intergenic: 102386 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 137051, rend_intergenic: 130402 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141647, rend_intergenic: 137694 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149470, rend_intergenic: 143947 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155396, rend_intergenic: 152731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158948, rend_intergenic: 156830 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 169599, rend_intergenic: 161853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212167, rend_intergenic: 210500 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 22 predictions persist after filtering for low support -building DP trellis -building trellis in range 197940 - 215968 -exon list size: 39 building trellis 2.4 4.9 7.3 9.8 12.2 14.6 17.1 19.5 22.0 24.4 26.8 29.3 31.7 34.1 36.6 39.0 41.5 43.9 46.3 48.8 51.2 53.7 56.1 58.5 61.0 63.4 65.9 68.3 70.7 73.2 75.6 78.0 80.5 82.9 85.4 87.8 90.2 92.7 95.1 97.6 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 197940 - 211867 -exon list size: 29 building trellis 3.2 6.5 9.7 12.9 16.1 19.4 22.6 25.8 29.0 32.3 35.5 38.7 41.9 45.2 48.4 51.6 54.8 58.1 61.3 64.5 67.7 71.0 74.2 77.4 80.6 83.9 87.1 90.3 93.5 96.8 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 197940 - 208003 -exon list size: 20 building trellis 4.5 9.1 13.6 18.2 22.7 27.3 31.8 36.4 40.9 45.5 50.0 54.5 59.1 63.6 68.2 72.7 77.3 81.8 86.4 90.9 95.5 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support