-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_5062891-5252857

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_25242-T1
Valid prediction for GlimmerHMM_glimmerT_25241-T1
Valid prediction for pasa_asmbl_4421.p1
Valid prediction for snap_scaffold_10-snap.1147-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g16921.t1
Valid prediction for GlimmerHMM_glimmerT_25216-T1
Valid prediction for GeneMark_model.43140_t
Valid prediction for CodingQuarry_transcript_5389-T1
Valid prediction for pasa_asmbl_4426.p1
Valid prediction for GeneMark_model.43136_t
Valid prediction for snap_scaffold_10-snap.1106-T1
Valid prediction for GeneMark_model.43133_t
Valid prediction for snap_scaffold_10-snap.1120-T1
Valid prediction for GlimmerHMM_glimmerT_25244-T1
Valid prediction for snap_scaffold_10-snap.1126-T1
Valid prediction for GlimmerHMM_glimmerT_25233-T1
Valid prediction for GlimmerHMM_glimmerT_25229-T1
Valid prediction for GlimmerHMM_glimmerT_25245-T1
Valid prediction for snap_scaffold_10-snap.1143-T1
Valid prediction for snap_scaffold_10-snap.1146-T1
Valid prediction for snap_scaffold_10-snap.1125-T1
Valid prediction for GlimmerHMM_glimmerT_25221-T1
Valid prediction for snap_scaffold_10-snap.1109-T1
Couldn't classify 130949, 131110
Couldn't classify 131947, 132062
Sorry, prediction pasa_asmbl_4433.p1 fails validation.
(GTC)	 GC	130949-131110	GT	AGG
(GTG)	 AG	131260-131400	GT	AGG
(GAG)	 AG	131692-131836	GT	GGG
(ATA)	 AG	131947-132062	GA	AAG
-recovered pasa_asmbl_4433.p1, internal, 131260, 131400
-recovered pasa_asmbl_4433.p1, internal, 131692, 131836
Valid prediction for GlimmerHMM_glimmerT_25231-T1
Valid prediction for GeneMark_model.43159_t
Valid prediction for GeneMark_model.43128_t
Valid prediction for snap_scaffold_10-snap.1135-T1
Valid prediction for GlimmerHMM_glimmerT_25223-T1
Couldn't classify 134415, 134501
Sorry, prediction pasa_asmbl_4435.p1 fails validation.
(AAG)	 GG	134415-134501	GT	AGG
(GAT)	 AG	134594-134884	GT	AGG
(GTG)	 AG	134984-135115	GT	AGG
(GCT)	 AG	135327-135423	GT	GGG
(ATG)	 AG	135562-135617	CC	GAC
-recovered pasa_asmbl_4435.p1, terminal, 135562, 135617
-recovered pasa_asmbl_4435.p1, internal, 134594, 134884
-recovered pasa_asmbl_4435.p1, internal, 134984, 135115
-recovered pasa_asmbl_4435.p1, internal, 135327, 135423
Valid prediction for GlimmerHMM_glimmerT_25235-T1
Valid prediction for snap_scaffold_10-snap.1133-T1
Valid prediction for GeneMark_model.43168_t
Valid prediction for snap_scaffold_10-snap.1122-T1
Valid prediction for GeneMark_model.43117_t
Valid prediction for GeneMark_model.43161_t
Valid prediction for snap_scaffold_10-snap.1112-T1
Valid prediction for GeneMark_model.43163_t
Valid prediction for snap_scaffold_10-snap.1115-T1
Valid prediction for GeneMark_model.43147_t
Valid prediction for Augustus_model.g16920.t1
Valid prediction for snap_scaffold_10-snap.1144-T1
Valid prediction for GeneMark_model.43123_t
Valid prediction for HiQ_model.g16919.t1
Valid prediction for GeneMark_model.43148_t
Valid prediction for CodingQuarry_transcript_5390-T1
Valid prediction for Augustus_model.g16915.t1
Couldn't classify 99768, 100182
Couldn't classify 101911, 101987
Sorry, prediction pasa_asmbl_4423.p1 fails validation.
(CTA)	 CC	99768-100182	GT	GGG
(GGA)	 AG	101911-101987	CG	GGC
Valid prediction for GeneMark_model.43116_t
Valid prediction for Augustus_model.g16923.t1
Valid prediction for GlimmerHMM_glimmerT_25226-T1
Valid prediction for pasa_asmbl_5075.p1
Valid prediction for CodingQuarry_transcript_5387-T1
Valid prediction for GeneMark_model.43158_t
Valid prediction for GeneMark_model.43119_t
Valid prediction for snap_scaffold_10-snap.1113-T1
Couldn't classify 133038, 133097
Couldn't classify 134189, 134305
Sorry, prediction pasa_asmbl_4434.p1 fails validation.
(GAC)	 TG	133038-133097	GT	TGG
(AAA)	 AG	133837-134061	GT	TAG
(GCT)	 AG	134189-134305	AT	CAA
-recovered pasa_asmbl_4434.p1, internal, 133837, 134061
Valid prediction for GlimmerHMM_glimmerT_25236-T1
Valid prediction for CodingQuarry_transcript_5388-T1
Valid prediction for GeneMark_model.43131_t
Valid prediction for GeneMark_model.43152_t
Valid prediction for snap_scaffold_10-snap.1108-T1
Valid prediction for snap_scaffold_10-snap.1136-T1
Valid prediction for GeneMark_model.43157_t
Valid prediction for HiQ_model.g16928.t1
Valid prediction for snap_scaffold_10-snap.1130-T1
Valid prediction for snap_scaffold_10-snap.1123-T1
Valid prediction for GeneMark_model.43144_t
Couldn't classify 165102, 165223
Couldn't classify 166828, 166892
Sorry, prediction pasa_asmbl_4436.p1 fails validation.
(GTG)	 TA	165102-165223	GT	TGG
(GGT)	 AG	165954-166063	GT	CAG
(AAT)	 AG	166828-166892	AC	TGA
-recovered pasa_asmbl_4436.p1, internal, 165954, 166063
Valid prediction for GeneMark_model.43142_t
Valid prediction for GlimmerHMM_glimmerT_25232-T1
Valid prediction for GeneMark_model.43165_t
Valid prediction for GeneMark_model.43127_t
Valid prediction for GeneMark_model.43145_t
Valid prediction for GeneMark_model.43150_t
Valid prediction for snap_scaffold_10-snap.1117-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g16910.t1
Valid prediction for GeneMark_model.43134_t
Valid prediction for GeneMark_model.43151_t
Valid prediction for snap_scaffold_10-snap.1118-T1
Valid prediction for HiQ_model.g16918.t1
Valid prediction for GeneMark_model.43160_t
Valid prediction for GeneMark_model.43156_t
Valid prediction for Augustus_model.g16912.t1
Valid prediction for CodingQuarry_transcript_5391-T1
Valid prediction for pasa_asmbl_3258.p1
Valid prediction for GlimmerHMM_glimmerT_25230-T1
Valid prediction for snap_scaffold_10-snap.1131-T1
Valid prediction for snap_scaffold_10-snap.1121-T1
Valid prediction for pasa_asmbl_3257.p1
Valid prediction for GlimmerHMM_glimmerT_25219-T1
Valid prediction for GlimmerHMM_glimmerT_25234-T1
Valid prediction for CodingQuarry_transcript_5384-T1
Valid prediction for snap_scaffold_10-snap.1142-T1
Valid prediction for GlimmerHMM_glimmerT_25224-T1
Valid prediction for GlimmerHMM_glimmerT_25213-T1
Valid prediction for Augustus_model.g16929.t1
Valid prediction for GeneMark_model.43141_t
Valid prediction for GeneMark_model.43120_t
Valid prediction for snap_scaffold_10-snap.1150-T1
Valid prediction for GeneMark_model.43132_t
Valid prediction for GeneMark_model.43137_t
Valid prediction for GeneMark_model.43139_t
Valid prediction for GeneMark_model.43149_t
Valid prediction for snap_scaffold_10-snap.1128-T1
Valid prediction for GlimmerHMM_glimmerT_25239-T1
Valid prediction for snap_scaffold_10-snap.1110-T1
Valid prediction for GlimmerHMM_glimmerT_25240-T1
Valid prediction for GlimmerHMM_glimmerT_25214-T1
Valid prediction for snap_scaffold_10-snap.1137-T1
Valid prediction for GeneMark_model.43121_t
Valid prediction for snap_scaffold_10-snap.1140-T1
Valid prediction for Augustus_model.g16922.t1
Valid prediction for GeneMark_model.43167_t
Valid prediction for Augustus_model.g16916.t1
Valid prediction for GeneMark_model.43115_t
Valid prediction for snap_scaffold_10-snap.1139-T1
Valid prediction for CodingQuarry_transcript_5386-T1
Valid prediction for snap_scaffold_10-snap.1105-T1
Valid prediction for GeneMark_model.43135_t
Valid prediction for HiQ_model.g16924.t1
Valid prediction for GlimmerHMM_glimmerT_25218-T1
Valid prediction for GlimmerHMM_glimmerT_25225-T1
Valid prediction for snap_scaffold_10-snap.1116-T1
Valid prediction for snap_scaffold_10-snap.1132-T1
Valid prediction for GeneMark_model.43124_t
Valid prediction for snap_scaffold_10-snap.1127-T1
Valid prediction for GeneMark_model.43122_t
Valid prediction for snap_scaffold_10-snap.1119-T1
Valid prediction for Augustus_model.g16911.t1
Valid prediction for GlimmerHMM_glimmerT_25237-T1
Valid prediction for GlimmerHMM_glimmerT_25238-T1
Valid prediction for GlimmerHMM_glimmerT_25227-T1
Valid prediction for GeneMark_model.43125_t
Valid prediction for GeneMark_model.43154_t
Valid prediction for GeneMark_model.43129_t
Valid prediction for GeneMark_model.43166_t
Couldn't classify 151926, 152032
Couldn't classify 156616, 156696
Sorry, prediction pasa_asmbl_3255.p1 fails validation.
(GAG)	 AC	151926-152032	GT	GCG
(CCT)	 AG	152418-152506	GT	AGG
(GAC)	 AG	152746-152810	GT	AGG
(AGT)	 AG	152983-153040	GT	AGG
(CTG)	 AG	153137-153207	GT	CTG
(GAG)	 AG	155149-155255	GT	AGG
(GAC)	 AG	155348-155532	GT	AGG
(ATA)	 AG	156099-156124	GT	AGG
(CAT)	 AG	156616-156696	GT	AGG
-recovered pasa_asmbl_3255.p1, internal, 152418, 152506
-recovered pasa_asmbl_3255.p1, internal, 152746, 152810
-recovered pasa_asmbl_3255.p1, internal, 152983, 153040
-recovered pasa_asmbl_3255.p1, internal, 153137, 153207
-recovered pasa_asmbl_3255.p1, internal, 155149, 155255
-recovered pasa_asmbl_3255.p1, internal, 155348, 155532
-recovered pasa_asmbl_3255.p1, internal, 156099, 156124
-recovered pasa_asmbl_3255.p1, internal, 156616, 156696
Valid prediction for HiQ_model.g16927.t1
Valid prediction for GeneMark_model.43153_t
Valid prediction for GlimmerHMM_glimmerT_25222-T1
Valid prediction for GeneMark_model.43146_t
Valid prediction for GeneMark_model.43138_t
Valid prediction for pasa_asmbl_3266.p1
Valid prediction for GeneMark_model.43130_t
Valid prediction for GeneMark_model.43164_t
Valid prediction for GeneMark_model.43162_t
Valid prediction for GeneMark_model.43155_t
Couldn't classify 48497, 48574
Sorry, prediction pasa_asmbl_3263.p1 fails validation.
(CTT)	 CA	48497-48574	GT	GGG
(AAC)	 AG	49068-49168	GT	AGG
(AGC)	 AG	49619-49693	GT	AAG
(CAC)	 AG	50052-50086	GT	TCG
(AAA)	 AG	50196-50302	GT	AGG
(GTG)	 AG	50538-50600	GT	AGG
(ACG)	 AG	51074-51172	GT	AGG
(CTG)	 AG	51737-51782	GT	TGG
(ACA)	 AG	51875-51954	GT	AGG
(GTA)	 AG	52029-52127	GT	AGG
(CTC)	 AG	52253-52349	GT	AGG
(CTC)	 AG	52551-52635	GT	AGG
(GAG)	 AG	52733-52767	GT	TGG
(GGG)	 AG	52854-52909	CA	AGC
-recovered pasa_asmbl_3263.p1, terminal, 52854, 52909
-recovered pasa_asmbl_3263.p1, internal, 49068, 49168
-recovered pasa_asmbl_3263.p1, internal, 49619, 49693
-recovered pasa_asmbl_3263.p1, internal, 50052, 50086
-recovered pasa_asmbl_3263.p1, internal, 50196, 50302
-recovered pasa_asmbl_3263.p1, internal, 50538, 50600
-recovered pasa_asmbl_3263.p1, internal, 51074, 51172
-recovered pasa_asmbl_3263.p1, internal, 51737, 51782
-recovered pasa_asmbl_3263.p1, internal, 51875, 51954
-recovered pasa_asmbl_3263.p1, internal, 52029, 52127
-recovered pasa_asmbl_3263.p1, internal, 52253, 52349
-recovered pasa_asmbl_3263.p1, internal, 52551, 52635
-recovered pasa_asmbl_3263.p1, internal, 52733, 52767
Valid prediction for GlimmerHMM_glimmerT_25220-T1
Valid prediction for GlimmerHMM_glimmerT_25243-T1
Valid prediction for snap_scaffold_10-snap.1138-T1
Valid prediction for Augustus_model.g16914.t1
Valid prediction for GlimmerHMM_glimmerT_25228-T1
Valid prediction for GlimmerHMM_glimmerT_25215-T1
Valid prediction for GlimmerHMM_glimmerT_25217-T1
Valid prediction for GeneMark_model.43118_t
Valid prediction for snap_scaffold_10-snap.1151-T1
Valid prediction for Augustus_model.g16913.t1
Valid prediction for CodingQuarry_transcript_5385-T1
Valid prediction for snap_scaffold_10-snap.1111-T1
Valid prediction for snap_scaffold_10-snap.1114-T1
Valid prediction for snap_scaffold_10-snap.1145-T1
Valid prediction for Augustus_model.g16925.t1
Valid prediction for snap_scaffold_10-snap.1129-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.43126_t
Valid prediction for snap_scaffold_10-snap.1134-T1
Valid prediction for snap_scaffold_10-snap.1107-T1
Couldn't classify 157114, 157170
Sorry, prediction pasa_asmbl_3253.p1 fails validation.
(CCC)	 CC	157114-157170	GT	AGG
(GAG)	 AG	157318-157464	GT	AGG
(GTG)	 AG	157992-158093	GT	AGG
(AAG)	 AG	158252-159069	GT	AGG
(TGA)	 AG	159478-160183	GT	GGG
(ATT)	 AG	160297-160452	GT	CTG
(GAG)	 AG	160656-160721	GT	AGG
(GGT)	 AG	160866-160952	AA	GAA
-recovered pasa_asmbl_3253.p1, terminal, 160866, 160952
-recovered pasa_asmbl_3253.p1, internal, 157318, 157464
-recovered pasa_asmbl_3253.p1, internal, 157992, 158093
-recovered pasa_asmbl_3253.p1, internal, 158252, 159069
-recovered pasa_asmbl_3253.p1, internal, 159478, 160183
-recovered pasa_asmbl_3253.p1, internal, 160297, 160452
-recovered pasa_asmbl_3253.p1, internal, 160656, 160721
Valid prediction for Augustus_model.g16926.t1
Valid prediction for snap_scaffold_10-snap.1148-T1
Valid prediction for snap_scaffold_10-snap.1141-T1
Valid prediction for snap_scaffold_10-snap.1124-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for Augustus_model.g16917.t1
Valid prediction for GeneMark_model.43143_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5203, rend_intergenic: 2001  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 6426, rend_intergenic: 5632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15410, rend_intergenic: 7240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27093, rend_intergenic: 23495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41375, rend_intergenic: 29165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46174, rend_intergenic: 42181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73192, rend_intergenic: 63069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90635, rend_intergenic: 84279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104201, rend_intergenic: 97097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106908, rend_intergenic: 105104  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114397, rend_intergenic: 110129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125721, rend_intergenic: 119686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140909, rend_intergenic: 126769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158917, rend_intergenic: 149702  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171919, rend_intergenic: 160062  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177354, rend_intergenic: 172672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 189967
-exon list size: 789


building trellis

0.1    
0.3    
0.4    
0.5    
0.6    
0.8    
0.9    
1.0    
1.1    
1.3    
1.4    
1.5    
1.6    
1.8    
1.9    
2.0    
2.1    
2.3    
2.4    
2.5    
2.7    
2.8    
2.9    
3.0    
3.2    
3.3    
3.4    
3.5    
3.7    
3.8    
3.9    
4.0    
4.2    
4.3    
4.4    
4.6    
4.7    
4.8    
4.9    
5.1    
5.2    
5.3    
5.4    
5.6    
5.7    
5.8    
5.9    
6.1    
6.2    
6.3    
6.4    
6.6    
6.7    
6.8    
7.0    
7.1    
7.2    
7.3    
7.5    
7.6    
7.7    
7.8    
8.0    
8.1    
8.2    
8.3    
8.5    
8.6    
8.7    
8.8    
9.0    
9.1    
9.2    
9.4    
9.5    
9.6    
9.7    
9.9    
10.0    
10.1    
10.2    
10.4    
10.5    
10.6    
10.7    
10.9    
11.0    
11.1    
11.3    
11.4    
11.5    
11.6    
11.8    
11.9    
12.0    
12.1    
12.3    
12.4    
12.5    
12.6    
12.8    
12.9    
13.0    
13.1    
13.3    
13.4    
13.5    
13.7    
13.8    
13.9    
14.0    
14.2    
14.3    
14.4    
14.5    
14.7    
14.8    
14.9    
15.0    
15.2    
15.3    
15.4    
15.5    
15.7    
15.8    
15.9    
16.1    
16.2    
16.3    
16.4    
16.6    
16.7    
16.8    
16.9    
17.1    
17.2    
17.3    
17.4    
17.6    
17.7    
17.8    
18.0    
18.1    
18.2    
18.3    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.5    
19.6    
19.7    
19.8    
20.0    
20.1    
20.2    
20.4    
20.5    
20.6    
20.7    
20.9    
21.0    
21.1    
21.2    
21.4    
21.5    
21.6    
21.7    
21.9    
22.0    
22.1    
22.3    
22.4    
22.5    
22.6    
22.8    
22.9    
23.0    
23.1    
23.3    
23.4    
23.5    
23.6    
23.8    
23.9    
24.0    
24.1    
24.3    
24.4    
24.5    
24.7    
24.8    
24.9    
25.0    
25.2    
25.3    
25.4    
25.5    
25.7    
25.8    
25.9    
26.0    
26.2    
26.3    
26.4    
26.5    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.2    
29.3    
29.5    
29.6    
29.7    
29.8    
30.0    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.8    
31.0    
31.1    
31.2    
31.4    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.2    
32.4    
32.5    
32.6    
32.7    
32.9    
33.0    
33.1    
33.2    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.1    
34.3    
34.4    
34.5    
34.6    
34.8    
34.9    
35.0    
35.1    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.1    
38.2    
38.3    
38.4    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.6    
39.7    
39.8    
39.9    
40.1    
40.2    
40.3    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.8    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.4    
43.5    
43.6    
43.7    
43.9    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.0    
48.2    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.8    
52.0    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 5203, rend_intergenic: 2001  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 6426, rend_intergenic: 5632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15410, rend_intergenic: 7240  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27093, rend_intergenic: 23495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41375, rend_intergenic: 29165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46174, rend_intergenic: 42181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73192, rend_intergenic: 63069  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90635, rend_intergenic: 84279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104201, rend_intergenic: 97097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106908, rend_intergenic: 105104  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114397, rend_intergenic: 110129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125721, rend_intergenic: 119686  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140909, rend_intergenic: 126769  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158917, rend_intergenic: 149702  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171919, rend_intergenic: 160062  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177354, rend_intergenic: 172672  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support