-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_4890900-5064778

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g16884.t1
Valid prediction for Augustus_model.g16906.t1
Valid prediction for snap_scaffold_10-snap.1103-T1
Valid prediction for snap_scaffold_10-snap.1093-T1
Couldn't classify 141607, 141758
Sorry, prediction pasa_asmbl_4418.p1 fails validation.
(ATG)	 CT	136527-136680	GT	AGG
(GCG)	 AG	137576-137805	GT	AGG
(GTG)	 AG	138201-138418	GT	GGG
(GTA)	 AG	138618-138705	GT	AGG
(GTT)	 AG	138805-138893	GT	AGG
(AGC)	 AG	139520-139707	GT	TGG
(GTC)	 AG	139854-139987	GT	AGG
(GGT)	 AG	140098-140289	GT	AGG
(AAT)	 AG	140869-141022	GT	AGG
(GTT)	 AG	141607-141758	GC	ACG
-recovered pasa_asmbl_4418.p1, initial, 136527, 136680
-recovered pasa_asmbl_4418.p1, internal, 137576, 137805
-recovered pasa_asmbl_4418.p1, internal, 138201, 138418
-recovered pasa_asmbl_4418.p1, internal, 138618, 138705
-recovered pasa_asmbl_4418.p1, internal, 138805, 138893
-recovered pasa_asmbl_4418.p1, internal, 139520, 139707
-recovered pasa_asmbl_4418.p1, internal, 139854, 139987
-recovered pasa_asmbl_4418.p1, internal, 140098, 140289
-recovered pasa_asmbl_4418.p1, internal, 140869, 141022
-recovered pasa_asmbl_4418.p1, internal, 141607, 141758
Valid prediction for GlimmerHMM_glimmerT_25201-T1
Valid prediction for GlimmerHMM_glimmerT_25190-T1
Couldn't classify 6454, 6495
Sorry, prediction pasa_asmbl_4410.p1 fails validation.
(ACT)	 AG	6454-6495	GT	CGG
(GTT)	 AG	6890-7147	CC	GAC
-recovered pasa_asmbl_4410.p1, terminal, 6890, 7147
-recovered pasa_asmbl_4410.p1, internal, 6454, 6495
Valid prediction for GeneMark_model.43071_t
Valid prediction for GeneMark_model.43112_t
Couldn't classify 24049, 24205
Couldn't classify 24860, 25020
Sorry, prediction pasa_asmbl_4412.p1 fails validation.
(AGC)	 GC	24049-24205	GT	AGG
(GCT)	 AG	24860-25020	GA	GAG
Couldn't classify 146161, 146253
Sorry, prediction pasa_asmbl_4420.p1 fails validation.
(AGT)	 GC	146161-146253	GT	TGG
(GGT)	 AG	146643-146822	GT	TGG
(GCT)	 AG	147050-147209	GT	TGG
(GGT)	 AG	148885-148966	GT	AGG
(GTT)	 AG	150613-150731	GT	TGG
(AAA)	 AG	150831-150946	GT	AGG
(GTG)	 AG	151467-151610	CC	AAC
-recovered pasa_asmbl_4420.p1, terminal, 151467, 151610
-recovered pasa_asmbl_4420.p1, internal, 146643, 146822
-recovered pasa_asmbl_4420.p1, internal, 147050, 147209
-recovered pasa_asmbl_4420.p1, internal, 148885, 148966
-recovered pasa_asmbl_4420.p1, internal, 150613, 150731
-recovered pasa_asmbl_4420.p1, internal, 150831, 150946
Valid prediction for snap_scaffold_10-snap.1075-T1
Sorry, intron length (3) is less than minimum required (10)
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_25207-T1
Valid prediction for GeneMark_model.43069_t
Couldn't classify 109111, 109248
Sorry, prediction GeneMark_model.43099_t fails validation.
(CTG)	 AG	109111-109248	GT	AGG
(GTG)	 AG	109370-109477	GT	CGG
(ACA)	 AG	109592-109701	GT	AAG
(ATC)	 AG	109875-109962	GT	AGG
(ACA)	 AG	110127-110227	GT	AAG
(AAA)	 AG	110452-110554	GT	TTG
(CCT)	 AG	111378-111461	GT	AGG
(GAG)	 AG	111869-112029	GT	CGG
(CAG)	 AG	112218-112292	GT	AGG
(AGG)	 AG	112436-112493	AT	AAA
-recovered GeneMark_model.43099_t, terminal, 112436, 112493
-recovered GeneMark_model.43099_t, internal, 109111, 109248
-recovered GeneMark_model.43099_t, internal, 109370, 109477
-recovered GeneMark_model.43099_t, internal, 109592, 109701
-recovered GeneMark_model.43099_t, internal, 109875, 109962
-recovered GeneMark_model.43099_t, internal, 110127, 110227
-recovered GeneMark_model.43099_t, internal, 110452, 110554
-recovered GeneMark_model.43099_t, internal, 111378, 111461
-recovered GeneMark_model.43099_t, internal, 111869, 112029
-recovered GeneMark_model.43099_t, internal, 112218, 112292
Valid prediction for snap_scaffold_10-snap.1064-T1
Valid prediction for Augustus_model.g16896.t1
Valid prediction for snap_scaffold_10-snap.1087-T1
Valid prediction for GlimmerHMM_glimmerT_25199-T1
Valid prediction for snap_scaffold_10-snap.1094-T1
Valid prediction for Augustus_model.g16897.t1
Valid prediction for Augustus_model.g16901.t1
Couldn't classify 37392, 37434
Couldn't classify 38556, 38651
Sorry, prediction pasa_asmbl_4413.p1 fails validation.
(GTC)	 CC	37392-37434	GT	CTG
(ATG)	 AG	37546-37667	GT	TGG
(CAC)	 AG	37818-37909	GT	GAG
(CTT)	 AG	38266-38344	GT	AGG
(GTG)	 AG	38556-38651	GA	CCG
add_exon() Sorry, pasa_asmbl_4413.p1 37546-37667-initial-1 is invalid.
-recovered pasa_asmbl_4413.p1, initial, 37546, 37667
-recovered pasa_asmbl_4413.p1, internal, 37546, 37667
-recovered pasa_asmbl_4413.p1, internal, 37818, 37909
-recovered pasa_asmbl_4413.p1, internal, 38266, 38344
Valid prediction for snap_scaffold_10-snap.1081-T1
Valid prediction for snap_scaffold_10-snap.1078-T1
Valid prediction for GeneMark_model.43110_t
Valid prediction for GlimmerHMM_glimmerT_25186-T1
Valid prediction for GeneMark_model.43065_t
Valid prediction for GeneMark_model.43082_t
Valid prediction for GeneMark_model.43092_t
Valid prediction for GeneMark_model.43106_t
Valid prediction for GlimmerHMM_glimmerT_25195-T1
Valid prediction for snap_scaffold_10-snap.1084-T1
Valid prediction for GlimmerHMM_glimmerT_25188-T1
Valid prediction for GeneMark_model.43061_t
Valid prediction for GeneMark_model.43078_t
Valid prediction for snap_scaffold_10-snap.1101-T1
Valid prediction for GeneMark_model.43063_t
Valid prediction for Augustus_model.g16907.t1
Valid prediction for snap_scaffold_10-snap.1098-T1
Couldn't classify 108861, 108970
Sorry, prediction GeneMark_model.43098_t fails validation.
(ATG)	 AG	105083-105553	GT	AGG
(AGC)	 AG	106508-106660	GT	ACG
(CTT)	 AG	107266-107406	GT	AGG
(GAG)	 AG	107558-107632	GT	GAG
(GAA)	 AG	107773-107837	GT	CCG
(TGG)	 AG	108412-108541	GT	AGG
(TTC)	 AG	108646-108834	GT	AGG
(AAA)	 AG	108861-108970	GT	TGG
-recovered GeneMark_model.43098_t, initial, 105083, 105553
-recovered GeneMark_model.43098_t, internal, 105083, 105553
-recovered GeneMark_model.43098_t, internal, 106508, 106660
-recovered GeneMark_model.43098_t, internal, 107266, 107406
-recovered GeneMark_model.43098_t, internal, 107558, 107632
-recovered GeneMark_model.43098_t, internal, 107773, 107837
-recovered GeneMark_model.43098_t, internal, 108412, 108541
-recovered GeneMark_model.43098_t, internal, 108646, 108834
-recovered GeneMark_model.43098_t, internal, 108861, 108970
Valid prediction for Augustus_model.g16890.t1
Valid prediction for Augustus_model.g16886.t1
Valid prediction for pasa_asmbl_5151.p1
Valid prediction for snap_scaffold_10-snap.1068-T1
Couldn't classify 39500, 39580
Couldn't classify 40787, 40851
Sorry, prediction pasa_asmbl_4414.p1 fails validation.
(GAG)	 CA	39500-39580	GT	AGG
(TCT)	 AG	39701-39846	GT	GGG
(GGG)	 AG	40056-40221	GT	AGG
(CAC)	 AG	40447-40666	GT	AGG
(CTG)	 AG	40787-40851	GA	AGG
-recovered pasa_asmbl_4414.p1, internal, 39701, 39846
-recovered pasa_asmbl_4414.p1, internal, 40056, 40221
-recovered pasa_asmbl_4414.p1, internal, 40447, 40666
Valid prediction for GeneMark_model.43086_t
Valid prediction for snap_scaffold_10-snap.1071-T1
Valid prediction for GeneMark_model.43080_t
Valid prediction for GeneMark_model.43076_t
Valid prediction for GlimmerHMM_glimmerT_25204-T1
Valid prediction for GeneMark_model.43102_t
Valid prediction for Augustus_model.g16891.t1
Valid prediction for snap_scaffold_10-snap.1095-T1
Valid prediction for Augustus_model.g16904.t1
Valid prediction for snap_scaffold_10-snap.1090-T1
Valid prediction for GeneMark_model.43085_t
Valid prediction for GeneMark_model.43104_t
Valid prediction for Augustus_model.g16889.t1
Valid prediction for GeneMark_model.43073_t
Valid prediction for GeneMark_model.43108_t
Valid prediction for GlimmerHMM_glimmerT_25209-T1
Valid prediction for GeneMark_model.43067_t
Valid prediction for GlimmerHMM_glimmerT_25208-T1
Couldn't classify 72158, 72356
Sorry, prediction pasa_asmbl_4416.p1 fails validation.
(ATG)	 TG	70920-70948	GT	CAG
(ATC)	 AG	71170-71316	GT	CGG
(GAA)	 AG	72158-72356	CG	ACC
-recovered pasa_asmbl_4416.p1, initial, 70920, 70948
-recovered pasa_asmbl_4416.p1, internal, 71170, 71316
Valid prediction for snap_scaffold_10-snap.1066-T1
Valid prediction for GeneMark_model.43105_t
Valid prediction for GlimmerHMM_glimmerT_25203-T1
Valid prediction for snap_scaffold_10-snap.1069-T1
Sorry, intron length (8) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.43081_t
Valid prediction for GlimmerHMM_glimmerT_25197-T1
Valid prediction for GeneMark_model.43094_t
Valid prediction for GeneMark_model.43075_t
Valid prediction for snap_scaffold_10-snap.1083-T1
Valid prediction for snap_scaffold_10-snap.1089-T1
Valid prediction for snap_scaffold_10-snap.1080-T1
Valid prediction for snap_scaffold_10-snap.1070-T1
Valid prediction for Augustus_model.g16898.t1
Valid prediction for GeneMark_model.43088_t
Couldn't classify 51797, 52205
Sorry, prediction pasa_asmbl_3251.p1 fails validation.
(CCG)	 CC	51797-52205	GT	TGG
(GTG)	 AG	52673-52793	GT	ATG
(GTT)	 AG	52903-52940	GT	TGG
(GGG)	 AG	53044-53060	GT	AGG
(GGC)	 AG	53185-53364	GT	AGG
(TTT)	 AG	53471-53630	GT	CTG
(ACG)	 AG	53753-53849	GT	AGG
(TGA)	 AG	53937-53953	GT	AGG
(TGG)	 AG	54145-54217	GT	AGG
(CCC)	 AG	54350-54454	GT	CAG
(CCT)	 AG	54869-54912	GT	AGG
(CAG)	 AG	55174-55252	GT	AGG
(CCA)	 AG	55376-55472	GT	AAG
(TTT)	 AG	55610-55772	GT	GTG
(TCG)	 AG	56429-56462	GT	GAG
(GGA)	 AG	56651-56679	GT	TGG
(GCG)	 AG	56786-56808	GA	GAG
-recovered pasa_asmbl_3251.p1, terminal, 56786, 56808
-recovered pasa_asmbl_3251.p1, internal, 52673, 52793
-recovered pasa_asmbl_3251.p1, internal, 52903, 52940
-recovered pasa_asmbl_3251.p1, internal, 53044, 53060
-recovered pasa_asmbl_3251.p1, internal, 53185, 53364
-recovered pasa_asmbl_3251.p1, internal, 53471, 53630
-recovered pasa_asmbl_3251.p1, internal, 53753, 53849
-recovered pasa_asmbl_3251.p1, internal, 53937, 53953
-recovered pasa_asmbl_3251.p1, internal, 54145, 54217
-recovered pasa_asmbl_3251.p1, internal, 54350, 54454
-recovered pasa_asmbl_3251.p1, internal, 54869, 54912
-recovered pasa_asmbl_3251.p1, internal, 55174, 55252
-recovered pasa_asmbl_3251.p1, internal, 55376, 55472
-recovered pasa_asmbl_3251.p1, internal, 55610, 55772
-recovered pasa_asmbl_3251.p1, internal, 56429, 56462
-recovered pasa_asmbl_3251.p1, internal, 56651, 56679
Valid prediction for GeneMark_model.43064_t
Valid prediction for GeneMark_model.43096_t
Valid prediction for HiQ_model.g16902.t1
Valid prediction for Augustus_model.g16888.t1
Valid prediction for GeneMark_model.43109_t
Valid prediction for snap_scaffold_10-snap.1086-T1
Valid prediction for snap_scaffold_10-snap.1092-T1
Valid prediction for snap_scaffold_10-snap.1085-T1
Valid prediction for GeneMark_model.43101_t
Valid prediction for snap_scaffold_10-snap.1067-T1
Valid prediction for CodingQuarry_transcript_5382-T1
Valid prediction for snap_scaffold_10-snap.1088-T1
Valid prediction for GeneMark_model.43111_t
Valid prediction for snap_scaffold_10-snap.1104-T1
Valid prediction for Augustus_model.g16887.t1
Valid prediction for GeneMark_model.43100_t
Valid prediction for GlimmerHMM_glimmerT_25212-T1
Valid prediction for Augustus_model.g16900.t1
Valid prediction for HiQ_model.g16885.t1
Valid prediction for GeneMark_model.43062_t
Valid prediction for snap_scaffold_10-snap.1099-T1
Valid prediction for GlimmerHMM_glimmerT_25200-T1
Valid prediction for GlimmerHMM_glimmerT_25194-T1
Valid prediction for GeneMark_model.43095_t
Valid prediction for GlimmerHMM_glimmerT_25198-T1
Valid prediction for GeneMark_model.43074_t
Valid prediction for Augustus_model.g16905.t1
Valid prediction for Augustus_model.g16895.t1
Valid prediction for snap_scaffold_10-snap.1074-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_10-snap.1065-T1
Valid prediction for GeneMark_model.43090_t
Valid prediction for GlimmerHMM_glimmerT_25206-T1
Valid prediction for snap_scaffold_10-snap.1072-T1
Valid prediction for snap_scaffold_10-snap.1096-T1
Valid prediction for snap_scaffold_10-snap.1102-T1
Valid prediction for GlimmerHMM_glimmerT_25205-T1
Valid prediction for GeneMark_model.43089_t
Valid prediction for GeneMark_model.43113_t
Valid prediction for snap_scaffold_10-snap.1077-T1
Valid prediction for pasa_asmbl_3234.p1
Valid prediction for GlimmerHMM_glimmerT_25202-T1
Valid prediction for Augustus_model.g16892.t1
Valid prediction for GeneMark_model.43097_t
Couldn't classify 109484, 109502
Couldn't classify 111526, 111600
Sorry, prediction pasa_asmbl_3241.p1 fails validation.
(AAC)	 AC	109484-109502	GT	CGG
(GGG)	 AG	109685-109769	GT	AGG
(AGT)	 AG	109889-109924	GT	AGG
(CAG)	 AG	110031-110164	GT	TGG
(GTC)	 AG	110363-110486	GT	GGG
(GTT)	 AG	111203-111347	GT	TGG
(GAA)	 AG	111526-111600	CC	GGC
-recovered pasa_asmbl_3241.p1, internal, 109685, 109769
-recovered pasa_asmbl_3241.p1, internal, 109889, 109924
-recovered pasa_asmbl_3241.p1, internal, 110031, 110164
-recovered pasa_asmbl_3241.p1, internal, 110363, 110486
-recovered pasa_asmbl_3241.p1, internal, 111203, 111347
Valid prediction for Augustus_model.g16894.t1
Valid prediction for snap_scaffold_10-snap.1079-T1
Valid prediction for Augustus_model.g16908.t1
Valid prediction for snap_scaffold_10-snap.1073-T1
Valid prediction for GlimmerHMM_glimmerT_25189-T1
Valid prediction for Augustus_model.g16909.t1
Valid prediction for snap_scaffold_10-snap.1091-T1
Valid prediction for Augustus_model.g16899.t1
Valid prediction for snap_scaffold_10-snap.1082-T1
Valid prediction for GlimmerHMM_glimmerT_25210-T1
Valid prediction for GeneMark_model.43114_t
Valid prediction for GeneMark_model.43077_t
Valid prediction for GeneMark_model.43070_t
Valid prediction for GeneMark_model.43084_t
Valid prediction for GeneMark_model.43091_t
Valid prediction for GeneMark_model.43083_t
Valid prediction for snap_scaffold_10-snap.1097-T1
Valid prediction for GlimmerHMM_glimmerT_25187-T1
Valid prediction for GeneMark_model.43079_t
Valid prediction for GeneMark_model.43072_t
Valid prediction for Augustus_model.g16903.t1
Valid prediction for Augustus_model.g16893.t1
Valid prediction for GeneMark_model.43107_t
Valid prediction for GlimmerHMM_glimmerT_25196-T1
Valid prediction for GeneMark_model.43103_t
Valid prediction for snap_scaffold_10-snap.1076-T1
Valid prediction for GlimmerHMM_glimmerT_25191-T1
Valid prediction for GeneMark_model.43087_t
Valid prediction for snap_scaffold_10-snap.1100-T1
Valid prediction for GlimmerHMM_glimmerT_25192-T1
Valid prediction for GlimmerHMM_glimmerT_25193-T1
Valid prediction for GlimmerHMM_glimmerT_25211-T1
Valid prediction for GeneMark_model.43093_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7147, rend_intergenic: 7030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13091, rend_intergenic: 7663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19905, rend_intergenic: 13924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23008, rend_intergenic: 20318  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43985, rend_intergenic: 24838  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50061, rend_intergenic: 48651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58117, rend_intergenic: 53185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64523, rend_intergenic: 58137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69052, rend_intergenic: 66621  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83282, rend_intergenic: 69284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88275, rend_intergenic: 84036  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95231, rend_intergenic: 92878  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108088, rend_intergenic: 105083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113721, rend_intergenic: 108678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122951, rend_intergenic: 119474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148979, rend_intergenic: 136521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160497, rend_intergenic: 153968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163820, rend_intergenic: 161034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171991, rend_intergenic: 164012  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 173879
-exon list size: 857


building trellis

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17.2    
17.3    
17.5    
17.6    
17.7    
17.8    
17.9    
18.0    
18.2    
18.3    
18.4    
18.5    
18.6    
18.7    
18.9    
19.0    
19.1    
19.2    
19.3    
19.4    
19.6    
19.7    
19.8    
19.9    
20.0    
20.1    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.4    
21.5    
21.7    
21.8    
21.9    
22.0    
22.1    
22.2    
22.4    
22.5    
22.6    
22.7    
22.8    
22.9    
23.1    
23.2    
23.3    
23.4    
23.5    
23.6    
23.7    
23.9    
24.0    
24.1    
24.2    
24.3    
24.4    
24.6    
24.7    
24.8    
24.9    
25.0    
25.1    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
26.0    
26.1    
26.2    
26.3    
26.4    
26.5    
26.7    
26.8    
26.9    
27.0    
27.1    
27.2    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
31.0    
31.1    
31.2    
31.3    
31.4    
31.5    
31.7    
31.8    
31.9    
32.0    
32.1    
32.2    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.7    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 7147, rend_intergenic: 7030  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13091, rend_intergenic: 7663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 19905, rend_intergenic: 13924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23008, rend_intergenic: 20318  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43985, rend_intergenic: 24838  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50061, rend_intergenic: 48651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58117, rend_intergenic: 53185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64523, rend_intergenic: 58137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69052, rend_intergenic: 66621  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 83282, rend_intergenic: 69284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88275, rend_intergenic: 84036  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95231, rend_intergenic: 92878  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108088, rend_intergenic: 105083  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113721, rend_intergenic: 108678  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122951, rend_intergenic: 119474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148979, rend_intergenic: 136521  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160497, rend_intergenic: 153968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163820, rend_intergenic: 161034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171991, rend_intergenic: 164012  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support