-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_3563208-3814203 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_24993-T1 Valid prediction for GeneMark_model.42711_t Valid prediction for HiQ_model.g16756.t1 Couldn't classify 93693, 93741 Couldn't classify 94530, 94641 Sorry, prediction pasa_asmbl_4334.p1 fails validation. (GTG) CG 93693-93741 GT GAG (TCG) AG 93873-93949 GT AGG (GTG) AG 94044-94150 GT AAG (TGC) AG 94530-94641 CA GCC -recovered pasa_asmbl_4334.p1, internal, 93873, 93949 -recovered pasa_asmbl_4334.p1, internal, 94044, 94150 Valid prediction for snap_scaffold_10-snap.806-T1 Valid prediction for snap_scaffold_10-snap.786-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for HiQ_model.g16763.t1 Valid prediction for snap_scaffold_10-snap.810-T1 Valid prediction for GeneMark_model.42730_t Valid prediction for GeneMark_model.42696_t Valid prediction for GeneMark_model.42687_t Valid prediction for CodingQuarry_transcript_5330-T1 Valid prediction for GeneMark_model.42700_t Valid prediction for snap_scaffold_10-snap.765-T1 Valid prediction for GlimmerHMM_glimmerT_25003-T1 Couldn't classify 233768, 233927 Sorry, prediction pasa_asmbl_4356.p1 fails validation. (GAA) AT 233768-233927 GT AGG (ACT) AG 234463-234534 GT AGG (GCA) AG 234846-235021 GT CAG (GTG) AG 235129-235203 GT AGG (GTG) AG 235340-235464 GT GCG (CTA) AG 235918-236043 GT AAG (GTC) AG 236150-236306 GT GGG (GGC) AG 239184-239287 GT ACG (TAT) AG 240306-240459 AA GAA -recovered pasa_asmbl_4356.p1, terminal, 240306, 240459 -recovered pasa_asmbl_4356.p1, internal, 234463, 234534 -recovered pasa_asmbl_4356.p1, internal, 234846, 235021 -recovered pasa_asmbl_4356.p1, internal, 235129, 235203 -recovered pasa_asmbl_4356.p1, internal, 235340, 235464 -recovered pasa_asmbl_4356.p1, internal, 235918, 236043 -recovered pasa_asmbl_4356.p1, internal, 236150, 236306 -recovered pasa_asmbl_4356.p1, internal, 239184, 239287 Valid prediction for GlimmerHMM_glimmerT_25008-T1 Valid prediction for snap_scaffold_10-snap.793-T1 Valid prediction for GeneMark_model.42688_t Valid prediction for GeneMark_model.42694_t Valid prediction for pasa_asmbl_4346.p1 Valid prediction for GlimmerHMM_glimmerT_24999-T1 Valid prediction for Augustus_model.g16753.t1 Valid prediction for GlimmerHMM_glimmerT_24981-T1 Valid prediction for HiQ_model.g16752.t1 Valid prediction for GlimmerHMM_glimmerT_24983-T1 Couldn't classify 104610, 104705 Couldn't classify 107722, 107851 Sorry, prediction pasa_asmbl_4338.p1 fails validation. (AAT) CC 104610-104705 GT AGG (GTG) AG 105287-105416 GT TGG (AGT) AG 105968-106054 GT AGG (GGA) AG 107557-107647 GT AGG (GCG) AG 107722-107851 CC ACC -recovered pasa_asmbl_4338.p1, internal, 105287, 105416 -recovered pasa_asmbl_4338.p1, internal, 105968, 106054 -recovered pasa_asmbl_4338.p1, internal, 107557, 107647 Valid prediction for snap_scaffold_10-snap.796-T1 Valid prediction for snap_scaffold_10-snap.783-T1 Valid prediction for GeneMark_model.42672_t Valid prediction for snap_scaffold_10-snap.780-T1 Valid prediction for GeneMark_model.42691_t Valid prediction for GeneMark_model.42745_t Valid prediction for GlimmerHMM_glimmerT_24998-T1 Valid prediction for snap_scaffold_10-snap.789-T1 Valid prediction for snap_scaffold_10-snap.775-T1 Valid prediction for GlimmerHMM_glimmerT_24997-T1 Valid prediction for Augustus_model.g16744.t1 Valid prediction for Augustus_model.g16759.t1 Valid prediction for CodingQuarry_transcript_5335-T1 Valid prediction for GlimmerHMM_glimmerT_24980-T1 Valid prediction for snap_scaffold_10-snap.808-T1 Valid prediction for snap_scaffold_10-snap.804-T1 Valid prediction for GeneMark_model.42732_t Valid prediction for GlimmerHMM_glimmerT_24996-T1 Valid prediction for GeneMark_model.42742_t Valid prediction for Augustus_model.g16754.t1 Valid prediction for pasa_asmbl_4340.p1 Valid prediction for GlimmerHMM_glimmerT_24977-T1 Valid prediction for Augustus_model.g16755.t1 Valid prediction for snap_scaffold_10-snap.805-T1 Valid prediction for GeneMark_model.42683_t Valid prediction for snap_scaffold_10-snap.798-T1 Valid prediction for GeneMark_model.42677_t Valid prediction for GeneMark_model.42735_t Valid prediction for snap_scaffold_10-snap.778-T1 Valid prediction for GeneMark_model.42698_t Valid prediction for snap_scaffold_10-snap.767-T1 Valid prediction for CodingQuarry_transcript_5329-T1 Valid prediction for snap_scaffold_10-snap.801-T1 Valid prediction for pasa_asmbl_4351.p1 Valid prediction for Augustus_model.g16743.t1 Valid prediction for GeneMark_model.42704_t Valid prediction for GeneMark_model.42712_t Valid prediction for GeneMark_model.42728_t Valid prediction for Augustus_model.g16747.t1 Valid prediction for GeneMark_model.42726_t Valid prediction for Augustus_model.g16745.t1 Valid prediction for snap_scaffold_10-snap.794-T1 Valid prediction for GeneMark_model.42679_t Couldn't classify 95620, 95792 Sorry, prediction pasa_asmbl_4335.p1 fails validation. (AAC) GG 95620-95792 GT AAG (TGA) AG 96729-96960 AC AAA -recovered pasa_asmbl_4335.p1, terminal, 96729, 96960 Couldn't classify 205078, 205539 Sorry, prediction pasa_asmbl_3140.p1 fails validation. (AGG) GC 205078-205539 AA AAA Valid prediction for Augustus_model.g16751.t1 Valid prediction for GeneMark_model.42740_t Valid prediction for GlimmerHMM_glimmerT_25000-T1 Valid prediction for GeneMark_model.42723_t Valid prediction for GeneMark_model.42685_t Valid prediction for pasa_asmbl_4349.p1 Valid prediction for snap_scaffold_10-snap.782-T1 Valid prediction for GlimmerHMM_glimmerT_24989-T1 Valid prediction for GlimmerHMM_glimmerT_24991-T1 Valid prediction for HiQ_model.g16761.t1 Valid prediction for GlimmerHMM_glimmerT_25001-T1 Valid prediction for GlimmerHMM_glimmerT_24990-T1 Valid prediction for GlimmerHMM_glimmerT_25012-T1 Valid prediction for GlimmerHMM_glimmerT_25005-T1 Valid prediction for GeneMark_model.42701_t Valid prediction for GeneMark_model.42675_t Valid prediction for GeneMark_model.42737_t Valid prediction for pasa_asmbl_4348.p2 Valid prediction for GlimmerHMM_glimmerT_24995-T1 Valid prediction for GeneMark_model.42724_t Valid prediction for GlimmerHMM_glimmerT_25006-T1 Valid prediction for GlimmerHMM_glimmerT_25011-T1 Valid prediction for GeneMark_model.42714_t Valid prediction for snap_scaffold_10-snap.792-T1 Valid prediction for snap_scaffold_10-snap.769-T1 Valid prediction for GeneMark_model.42719_t Valid prediction for snap_scaffold_10-snap.811-T1 Valid prediction for Augustus_model.g16749.t1 Valid prediction for GeneMark_model.42707_t Valid prediction for GeneMark_model.42738_t Valid prediction for snap_scaffold_10-snap.768-T1 Valid prediction for Augustus_model.g16748.t1 Valid prediction for GeneMark_model.42721_t Valid prediction for GeneMark_model.42709_t Valid prediction for GeneMark_model.42744_t Valid prediction for GlimmerHMM_glimmerT_24987-T1 Couldn't classify 111063, 111149 Sorry, prediction pasa_asmbl_4339.p1 fails validation. (CAG) TT 111063-111149 GT CGG (GTT) AG 111393-111506 GT TGG (ATC) AG 111668-111806 GT AGG (GTT) AG 112110-112223 GT GGG (GTG) AG 112849-112996 GT AGG (TCG) AG 113684-113777 GT AGG (GTG) AG 115851-116013 GT AGG (GCT) AG 116122-116290 GT GAG (GAA) AG 116466-116601 GT TGG (GTG) AG 118852-119016 AA AGA -recovered pasa_asmbl_4339.p1, terminal, 118852, 119016 -recovered pasa_asmbl_4339.p1, internal, 111393, 111506 -recovered pasa_asmbl_4339.p1, internal, 111668, 111806 -recovered pasa_asmbl_4339.p1, internal, 112110, 112223 -recovered pasa_asmbl_4339.p1, internal, 112849, 112996 -recovered pasa_asmbl_4339.p1, internal, 113684, 113777 -recovered pasa_asmbl_4339.p1, internal, 115851, 116013 -recovered pasa_asmbl_4339.p1, internal, 116122, 116290 -recovered pasa_asmbl_4339.p1, internal, 116466, 116601 Valid prediction for GeneMark_model.42746_t Valid prediction for GlimmerHMM_glimmerT_24985-T1 Valid prediction for GeneMark_model.42681_t Couldn't classify 101809, 101818 Couldn't classify 103244, 103342 Sorry, prediction pasa_asmbl_4337.p1 fails validation. (CAC) GG 101809-101818 GT AGG (GCC) AG 102167-102345 GT CGG (CTA) AG 102624-102803 GT CGG (GTG) AG 103244-103342 AC AGA -recovered pasa_asmbl_4337.p1, internal, 102167, 102345 -recovered pasa_asmbl_4337.p1, internal, 102624, 102803 Valid prediction for GeneMark_model.42702_t Valid prediction for snap_scaffold_10-snap.803-T1 Valid prediction for GlimmerHMM_glimmerT_24979-T1 Valid prediction for snap_scaffold_10-snap.770-T1 Valid prediction for GlimmerHMM_glimmerT_24988-T1 Valid prediction for GlimmerHMM_glimmerT_25009-T1 Valid prediction for GeneMark_model.42716_t Valid prediction for GeneMark_model.42705_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.42736_t Valid prediction for GeneMark_model.42741_t Valid prediction for GeneMark_model.42693_t Valid prediction for GeneMark_model.42727_t Valid prediction for GeneMark_model.42722_t Valid prediction for Augustus_model.g16758.t1 Valid prediction for GeneMark_model.42708_t Valid prediction for Augustus_model.g16750.t1 Valid prediction for snap_scaffold_10-snap.781-T1 Valid prediction for GeneMark_model.42717_t Valid prediction for CodingQuarry_transcript_5332-T1 Valid prediction for GeneMark_model.42715_t Valid prediction for snap_scaffold_10-snap.777-T1 Valid prediction for GlimmerHMM_glimmerT_24986-T1 Valid prediction for GeneMark_model.42684_t Valid prediction for GeneMark_model.42734_t Valid prediction for CodingQuarry_transcript_5333-T1 Valid prediction for CodingQuarry_transcript_5334-T1 Valid prediction for GeneMark_model.42695_t Valid prediction for GlimmerHMM_glimmerT_25007-T1 Valid prediction for snap_scaffold_10-snap.771-T1 Valid prediction for snap_scaffold_10-snap.773-T1 Valid prediction for Augustus_model.g16742.t1 Valid prediction for GeneMark_model.42697_t Valid prediction for snap_scaffold_10-snap.809-T1 Valid prediction for GeneMark_model.42673_t Valid prediction for snap_scaffold_10-snap.800-T1 Valid prediction for GlimmerHMM_glimmerT_25004-T1 Valid prediction for snap_scaffold_10-snap.779-T1 Valid prediction for snap_scaffold_10-snap.772-T1 Valid prediction for snap_scaffold_10-snap.788-T1 Valid prediction for GeneMark_model.42739_t Valid prediction for GeneMark_model.42699_t Valid prediction for GlimmerHMM_glimmerT_24994-T1 Valid prediction for GeneMark_model.42680_t Valid prediction for Augustus_model.g16746.t1 Valid prediction for snap_scaffold_10-snap.802-T1 Couldn't classify 34249, 34314 Couldn't classify 35272, 35406 Sorry, prediction pasa_asmbl_4094.p1 fails validation. (GGT) CA 34249-34314 GT CGG (CTG) AG 34911-35072 GT AGG (GTG) AG 35272-35406 CT CCC -recovered pasa_asmbl_4094.p1, internal, 34911, 35072 Valid prediction for GeneMark_model.42720_t Valid prediction for GeneMark_model.42706_t Valid prediction for CodingQuarry_transcript_5337-T1 Valid prediction for GlimmerHMM_glimmerT_24992-T1 Valid prediction for GeneMark_model.42713_t Valid prediction for GlimmerHMM_glimmerT_24978-T1 Valid prediction for GeneMark_model.42725_t Valid prediction for snap_scaffold_10-snap.766-T1 Valid prediction for Augustus_model.g16760.t1 Valid prediction for snap_scaffold_10-snap.790-T1 Valid prediction for GeneMark_model.42731_t Valid prediction for snap_scaffold_10-snap.807-T1 Valid prediction for snap_scaffold_10-snap.776-T1 Valid prediction for pasa_asmbl_3143.p1 Valid prediction for Augustus_model.g16764.t1 Valid prediction for GeneMark_model.42718_t Valid prediction for GeneMark_model.42703_t Valid prediction for GeneMark_model.42686_t Valid prediction for GeneMark_model.42692_t Valid prediction for snap_scaffold_10-snap.791-T1 Valid prediction for GeneMark_model.42690_t Valid prediction for snap_scaffold_10-snap.784-T1 Valid prediction for GeneMark_model.42710_t Valid prediction for HiQ_model.g16762.t1 Valid prediction for GlimmerHMM_glimmerT_25010-T1 Couldn't classify 35743, 35876 Couldn't classify 39326, 39457 Sorry, prediction pasa_asmbl_3141.p1 fails validation. (GTG) GT 35743-35876 GT AGG (GCA) AG 35970-36076 GT AGG (GAC) AG 36256-36329 GT AGG (AAG) AG 36437-36475 GT AGG (TCC) AG 36829-36995 GT AGG (GCA) AG 37106-37256 GT AGG (GCT) AG 37396-37594 GT GGG (GTT) AG 37725-37834 GT AGG (ATA) AG 38093-38273 GT AGG (CGG) AG 38431-38588 GT AGG (GAA) AG 38703-38918 GT AGG (CTT) AG 39169-39222 GT CTG (CTC) AG 39326-39457 GT AGG -recovered pasa_asmbl_3141.p1, internal, 35970, 36076 -recovered pasa_asmbl_3141.p1, internal, 36256, 36329 -recovered pasa_asmbl_3141.p1, internal, 36437, 36475 -recovered pasa_asmbl_3141.p1, internal, 36829, 36995 -recovered pasa_asmbl_3141.p1, internal, 37106, 37256 -recovered pasa_asmbl_3141.p1, internal, 37396, 37594 -recovered pasa_asmbl_3141.p1, internal, 37725, 37834 -recovered pasa_asmbl_3141.p1, internal, 38093, 38273 -recovered pasa_asmbl_3141.p1, internal, 38431, 38588 -recovered pasa_asmbl_3141.p1, internal, 38703, 38918 -recovered pasa_asmbl_3141.p1, internal, 39169, 39222 -recovered pasa_asmbl_3141.p1, internal, 39326, 39457 Valid prediction for GeneMark_model.42729_t Valid prediction for snap_scaffold_10-snap.795-T1 Valid prediction for GlimmerHMM_glimmerT_24984-T1 Valid prediction for GeneMark_model.42743_t Valid prediction for GlimmerHMM_glimmerT_24982-T1 Valid prediction for snap_scaffold_10-snap.787-T1 Valid prediction for GlimmerHMM_glimmerT_25002-T1 Valid prediction for CodingQuarry_transcript_5336-T1 Valid prediction for snap_scaffold_10-snap.785-T1 Valid prediction for pasa_asmbl_3134.p1 Valid prediction for GeneMark_model.42674_t Valid prediction for snap_scaffold_10-snap.774-T1 Valid prediction for GeneMark_model.42671_t Valid prediction for GeneMark_model.42682_t Valid prediction for GeneMark_model.42733_t Valid prediction for snap_scaffold_10-snap.799-T1 Valid prediction for GeneMark_model.42676_t Valid prediction for Augustus_model.g16757.t1 Valid prediction for snap_scaffold_10-snap.797-T1 Valid prediction for GeneMark_model.42678_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9536, rend_intergenic: 8320 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34313, rend_intergenic: 9550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65538, rend_intergenic: 36387 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79178, rend_intergenic: 73952 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108075, rend_intergenic: 100700 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119016, rend_intergenic: 109148 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124509, rend_intergenic: 123879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130941, rend_intergenic: 124782 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146375, rend_intergenic: 139491 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149398, rend_intergenic: 146381 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165027, rend_intergenic: 157968 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173375, rend_intergenic: 171246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174007, rend_intergenic: 173922 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187690, rend_intergenic: 177544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200339, rend_intergenic: 195724 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219387, rend_intergenic: 200370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 225707, rend_intergenic: 221886 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 231520, rend_intergenic: 228242 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 250996 -exon list size: 1047 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 42 predictions from path traversal Error with prediction: snap lend_intergenic: 9536, rend_intergenic: 8320 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34313, rend_intergenic: 9550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65538, rend_intergenic: 36387 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 79178, rend_intergenic: 73952 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108075, rend_intergenic: 100700 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119016, rend_intergenic: 109148 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124509, rend_intergenic: 123879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130941, rend_intergenic: 124782 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146375, rend_intergenic: 139491 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149398, rend_intergenic: 146381 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165027, rend_intergenic: 157968 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173375, rend_intergenic: 171246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 174007, rend_intergenic: 173922 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187690, rend_intergenic: 177544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200339, rend_intergenic: 195724 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219387, rend_intergenic: 200370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 225707, rend_intergenic: 221886 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 231520, rend_intergenic: 228242 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 22 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 14161 -exon list size: 26 building trellis 3.6 7.1 10.7 14.3 17.9 21.4 25.0 28.6 32.1 35.7 39.3 42.9 46.4 50.0 53.6 57.1 60.7 64.3 67.9 71.4 75.0 78.6 82.1 85.7 89.3 92.9 96.4 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 240460 - 250996 -exon list size: 18 building trellis 5.0 10.0 15.0 20.0 25.0 30.0 35.0 40.0 45.0 50.0 55.0 60.0 65.0 70.0 75.0 80.0 85.0 90.0 95.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support