-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_2419907-2659601 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.42371_t Valid prediction for GeneMark_model.42345_t Valid prediction for GlimmerHMM_glimmerT_24813-T1 Valid prediction for GeneMark_model.42363_t Valid prediction for GeneMark_model.42378_t Couldn't classify 85719, 86216 Sorry, prediction pasa_asmbl_4259.p1 fails validation. (CCT) CG 85719-86216 CT GAC Valid prediction for GeneMark_model.42409_t Valid prediction for GeneMark_model.42356_t Valid prediction for Augustus_model.g16623.t1 Valid prediction for HiQ_model.g16615.t1 Valid prediction for GeneMark_model.42398_t Couldn't classify 58275, 58691 Sorry, prediction pasa_asmbl_4255.p2 fails validation. (GAG) AC 58275-58691 GG ATG Valid prediction for snap_scaffold_10-snap.549-T1 Valid prediction for GeneMark_model.42342_t Valid prediction for Augustus_model.g16624.t1 Valid prediction for GeneMark_model.42350_t Valid prediction for Augustus_model.g16626.t1 Valid prediction for snap_scaffold_10-snap.531-T1 Valid prediction for snap_scaffold_10-snap.515-T1 Valid prediction for snap_scaffold_10-snap.546-T1 Valid prediction for GeneMark_model.42392_t Valid prediction for GeneMark_model.42352_t Valid prediction for snap_scaffold_10-snap.537-T1 Valid prediction for GeneMark_model.42354_t Valid prediction for GlimmerHMM_glimmerT_24798-T1 Valid prediction for GlimmerHMM_glimmerT_24800-T1 Valid prediction for snap_scaffold_10-snap.522-T1 Valid prediction for snap_scaffold_10-snap.532-T1 Valid prediction for snap_scaffold_10-snap.529-T1 Valid prediction for GeneMark_model.42386_t Valid prediction for GeneMark_model.42391_t Valid prediction for GeneMark_model.42358_t Valid prediction for GlimmerHMM_glimmerT_24819-T1 Valid prediction for GeneMark_model.42389_t Valid prediction for Augustus_model.g16627.t1 Valid prediction for Augustus_model.g16619.t1 Valid prediction for GlimmerHMM_glimmerT_24806-T1 Valid prediction for snap_scaffold_10-snap.548-T1 Valid prediction for GeneMark_model.42359_t Valid prediction for GeneMark_model.42365_t Valid prediction for GlimmerHMM_glimmerT_24796-T1 Valid prediction for GlimmerHMM_glimmerT_24816-T1 Couldn't classify 58755, 59048 Sorry, prediction pasa_asmbl_4256.p1 fails validation. (GAG) GG 58755-59048 GT AGG (GCC) AG 60845-60979 GT AGG (TAC) AG 63748-63950 GT AGG (GTT) AG 64807-64894 GT AGG (GAG) AG 66275-66445 AG AGA -recovered pasa_asmbl_4256.p1, terminal, 66275, 66445 -recovered pasa_asmbl_4256.p1, internal, 60845, 60979 -recovered pasa_asmbl_4256.p1, internal, 63748, 63950 -recovered pasa_asmbl_4256.p1, internal, 64807, 64894 Valid prediction for GeneMark_model.42361_t Valid prediction for GlimmerHMM_glimmerT_24814-T1 Valid prediction for GeneMark_model.42403_t Valid prediction for GeneMark_model.42376_t Valid prediction for Augustus_model.g16616.t1 Valid prediction for snap_scaffold_10-snap.558-T1 Valid prediction for GlimmerHMM_glimmerT_24809-T1 Valid prediction for GlimmerHMM_glimmerT_24805-T1 Valid prediction for Augustus_model.g16622.t1 Valid prediction for snap_scaffold_10-snap.550-T1 Couldn't classify 42332, 42487 Couldn't classify 44555, 45109 Sorry, prediction pasa_asmbl_4253.p1 fails validation. (AGA) TC 42332-42487 GT AGG (GTC) AG 43526-43624 GT AGG (GAC) AG 44555-45109 GT AGG -recovered pasa_asmbl_4253.p1, internal, 43526, 43624 -recovered pasa_asmbl_4253.p1, internal, 44555, 45109 Valid prediction for GeneMark_model.42368_t Valid prediction for snap_scaffold_10-snap.544-T1 Valid prediction for GeneMark_model.42367_t Valid prediction for GeneMark_model.42401_t Valid prediction for snap_scaffold_10-snap.542-T1 Valid prediction for GeneMark_model.42394_t Valid prediction for GlimmerHMM_glimmerT_24801-T1 Valid prediction for snap_scaffold_10-snap.513-T1 Valid prediction for snap_scaffold_10-snap.535-T1 Valid prediction for GeneMark_model.42384_t Valid prediction for snap_scaffold_10-snap.523-T1 Valid prediction for GeneMark_model.42348_t Valid prediction for snap_scaffold_10-snap.518-T1 Valid prediction for GlimmerHMM_glimmerT_24810-T1 Couldn't classify 137849, 138268 Sorry, prediction pasa_asmbl_4260.p3 fails validation. (CAG) GC 137849-138268 AA AGA Valid prediction for GeneMark_model.42374_t Valid prediction for GeneMark_model.42407_t Valid prediction for GeneMark_model.42382_t Valid prediction for GeneMark_model.42373_t Valid prediction for snap_scaffold_10-snap.553-T1 Valid prediction for GeneMark_model.42396_t Valid prediction for GeneMark_model.42344_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.42357_t Valid prediction for GeneMark_model.42380_t Valid prediction for GlimmerHMM_glimmerT_24804-T1 Valid prediction for snap_scaffold_10-snap.519-T1 Valid prediction for snap_scaffold_10-snap.527-T1 Valid prediction for GeneMark_model.42405_t Valid prediction for Augustus_model.g16630.t1 Valid prediction for GeneMark_model.42370_t Valid prediction for snap_scaffold_10-snap.524-T1 Valid prediction for GlimmerHMM_glimmerT_24807-T1 Valid prediction for GeneMark_model.42364_t Valid prediction for GeneMark_model.42390_t Valid prediction for snap_scaffold_10-snap.555-T1 Valid prediction for Augustus_model.g16614.t1 Valid prediction for GeneMark_model.42351_t Valid prediction for Augustus_model.g16618.t1 Valid prediction for GeneMark_model.42397_t Valid prediction for snap_scaffold_10-snap.512-T1 Valid prediction for GlimmerHMM_glimmerT_24820-T1 Valid prediction for Augustus_model.g16620.t1 Valid prediction for snap_scaffold_10-snap.533-T1 Valid prediction for GeneMark_model.42346_t Valid prediction for snap_scaffold_10-snap.556-T1 Valid prediction for snap_scaffold_10-snap.534-T1 Valid prediction for snap_scaffold_10-snap.521-T1 Valid prediction for GlimmerHMM_glimmerT_24821-T1 Valid prediction for snap_scaffold_10-snap.514-T1 Valid prediction for GeneMark_model.42366_t Valid prediction for GeneMark_model.42341_t Valid prediction for GlimmerHMM_glimmerT_24815-T1 Valid prediction for GlimmerHMM_glimmerT_24817-T1 Valid prediction for snap_scaffold_10-snap.528-T1 Valid prediction for GeneMark_model.42404_t Valid prediction for GeneMark_model.42388_t Valid prediction for GlimmerHMM_glimmerT_24811-T1 Valid prediction for GeneMark_model.42343_t Valid prediction for GlimmerHMM_glimmerT_24797-T1 Valid prediction for GeneMark_model.42395_t Couldn't classify 148582, 148731 Couldn't classify 149433, 149543 Sorry, prediction pasa_asmbl_3021.p1 fails validation. (CGG) AC 148582-148731 GT AGG (ATC) AG 148847-148942 GT AGG (GTG) AG 149433-149543 TG TGT -recovered pasa_asmbl_3021.p1, internal, 148847, 148942 Valid prediction for snap_scaffold_10-snap.559-T1 Valid prediction for GlimmerHMM_glimmerT_24818-T1 Valid prediction for CodingQuarry_transcript_5286-T1 Valid prediction for GeneMark_model.42355_t Valid prediction for snap_scaffold_10-snap.557-T1 Valid prediction for GeneMark_model.42347_t Valid prediction for GeneMark_model.42379_t Valid prediction for snap_scaffold_10-snap.545-T1 Valid prediction for GeneMark_model.42412_t Valid prediction for GeneMark_model.42383_t Valid prediction for GeneMark_model.42349_t Valid prediction for snap_scaffold_10-snap.541-T1 Valid prediction for Augustus_model.g16617.t1 Couldn't classify 2035, 2107 Couldn't classify 3980, 4012 Sorry, prediction pasa_asmbl_4095.p1 fails validation. (TTG) AT 2035-2107 GT AGG (GCT) AG 2469-2538 GT TGG (TCC) AG 2723-2836 GT CGG (GCC) AG 3091-3169 GT AGG (GAC) AG 3980-4012 CA ACC -recovered pasa_asmbl_4095.p1, internal, 2469, 2538 -recovered pasa_asmbl_4095.p1, internal, 2723, 2836 -recovered pasa_asmbl_4095.p1, internal, 3091, 3169 Valid prediction for snap_scaffold_10-snap.543-T1 Valid prediction for snap_scaffold_10-snap.554-T1 Valid prediction for snap_scaffold_10-snap.560-T1 Valid prediction for Augustus_model.g16625.t1 Valid prediction for snap_scaffold_10-snap.536-T1 Valid prediction for GeneMark_model.42377_t Valid prediction for GlimmerHMM_glimmerT_24799-T1 Couldn't classify 140617, 141162 Sorry, prediction pasa_asmbl_3022.p1 fails validation. (ATG) TA 140617-141162 AG TGA Valid prediction for GeneMark_model.42387_t Valid prediction for GeneMark_model.42362_t Valid prediction for Augustus_model.g16621.t1 Valid prediction for GeneMark_model.42353_t Valid prediction for Augustus_model.g16629.t1 Valid prediction for GeneMark_model.42406_t Valid prediction for GeneMark_model.42400_t Couldn't classify 157860, 157947 Sorry, prediction pasa_asmbl_3020.p1 fails validation. (AGT) AC 157860-157947 GT AGG (GTA) AG 159518-159741 CT AAC -recovered pasa_asmbl_3020.p1, terminal, 159518, 159741 Valid prediction for GlimmerHMM_glimmerT_24802-T1 Valid prediction for GeneMark_model.42393_t Valid prediction for snap_scaffold_10-snap.525-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for snap_scaffold_10-snap.526-T1 Valid prediction for GlimmerHMM_glimmerT_24803-T1 Valid prediction for snap_scaffold_10-snap.552-T1 Valid prediction for GeneMark_model.42372_t Valid prediction for GeneMark_model.42410_t Valid prediction for GlimmerHMM_glimmerT_24812-T1 Valid prediction for snap_scaffold_10-snap.539-T1 Valid prediction for GeneMark_model.42385_t Valid prediction for GeneMark_model.42399_t Valid prediction for snap_scaffold_10-snap.516-T1 Valid prediction for HiQ_model.g16628.t1 Valid prediction for GlimmerHMM_glimmerT_24808-T1 Valid prediction for snap_scaffold_10-snap.517-T1 Valid prediction for GeneMark_model.42381_t Valid prediction for snap_scaffold_10-snap.538-T1 Valid prediction for snap_scaffold_10-snap.551-T1 Valid prediction for GeneMark_model.42375_t Valid prediction for GeneMark_model.42360_t Valid prediction for GeneMark_model.42408_t Valid prediction for GeneMark_model.42402_t Valid prediction for snap_scaffold_10-snap.547-T1 Valid prediction for snap_scaffold_10-snap.520-T1 Valid prediction for snap_scaffold_10-snap.540-T1 Couldn't classify 4999, 5112 Sorry, prediction pasa_asmbl_3025.p1 fails validation. (GCT) CA 4999-5112 GT GGG (GTA) AG 6075-6247 GT AGG (ATT) AG 6556-6650 GT AGG (GCG) AG 7475-7508 GT AAG (GTT) AG 7627-7672 GT AGG (ATT) AG 7847-8027 GT AAG (GTG) AG 8253-8379 GT AGG (GAA) AG 8823-8992 GT AGG (GGA) AG 9167-9248 GT AGG (TTT) AG 9589-9697 GT AGG (CTT) AG 9807-9909 GT TGG (AGC) AG 10008-10076 GC AGG (GGG) AG 10230-10387 GA GAG -recovered pasa_asmbl_3025.p1, terminal, 10230, 10387 -recovered pasa_asmbl_3025.p1, internal, 6075, 6247 -recovered pasa_asmbl_3025.p1, internal, 6556, 6650 -recovered pasa_asmbl_3025.p1, internal, 7475, 7508 -recovered pasa_asmbl_3025.p1, internal, 7627, 7672 -recovered pasa_asmbl_3025.p1, internal, 7847, 8027 -recovered pasa_asmbl_3025.p1, internal, 8253, 8379 -recovered pasa_asmbl_3025.p1, internal, 8823, 8992 -recovered pasa_asmbl_3025.p1, internal, 9167, 9248 -recovered pasa_asmbl_3025.p1, internal, 9589, 9697 -recovered pasa_asmbl_3025.p1, internal, 9807, 9909 -recovered pasa_asmbl_3025.p1, internal, 10008, 10076 Valid prediction for snap_scaffold_10-snap.530-T1 Valid prediction for GeneMark_model.42369_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10021, rend_intergenic: 6067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17726, rend_intergenic: 14805 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29669, rend_intergenic: 18899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49338, rend_intergenic: 33347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52210, rend_intergenic: 49339 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66445, rend_intergenic: 52488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85553, rend_intergenic: 79955 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99079, rend_intergenic: 85665 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114144, rend_intergenic: 103003 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119042, rend_intergenic: 117038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119431, rend_intergenic: 119131 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138268, rend_intergenic: 121370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144790, rend_intergenic: 141516 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146432, rend_intergenic: 145668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156767, rend_intergenic: 152937 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158888, rend_intergenic: 158304 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161519, rend_intergenic: 161114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181624, rend_intergenic: 180158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212644, rend_intergenic: 181653 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 239695 -exon list size: 900 building trellis 0.1 0.2 0.3 0.4 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.6 99.7 99.8 99.9 -found 39 predictions from path traversal Error with prediction: snap lend_intergenic: 10021, rend_intergenic: 6067 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17726, rend_intergenic: 14805 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29669, rend_intergenic: 18899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49338, rend_intergenic: 33347 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52210, rend_intergenic: 49339 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66445, rend_intergenic: 52488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85553, rend_intergenic: 79955 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99079, rend_intergenic: 85665 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 114144, rend_intergenic: 103003 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119042, rend_intergenic: 117038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119431, rend_intergenic: 119131 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 138268, rend_intergenic: 121370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144790, rend_intergenic: 141516 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146432, rend_intergenic: 145668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156767, rend_intergenic: 152937 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 158888, rend_intergenic: 158304 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 161519, rend_intergenic: 161114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181624, rend_intergenic: 180158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 212644, rend_intergenic: 181653 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 16 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 11915 -exon list size: 51 building trellis 1.9 3.8 5.7 7.5 9.4 11.3 13.2 15.1 17.0 18.9 20.8 22.6 24.5 26.4 28.3 30.2 32.1 34.0 35.8 37.7 39.6 41.5 43.4 45.3 47.2 49.1 50.9 52.8 54.7 56.6 58.5 60.4 62.3 64.2 66.0 67.9 69.8 71.7 73.6 75.5 77.4 79.2 81.1 83.0 84.9 86.8 88.7 90.6 92.5 94.3 96.2 98.1 -found 5 predictions from path traversal GOT 5prime partial gene. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support