-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_14121590-14437880 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_10-snap.2838-T1 Valid prediction for GeneMark_model.45204_t Valid prediction for GlimmerHMM_glimmerT_26365-T1 Valid prediction for snap_scaffold_10-snap.2860-T1 Valid prediction for snap_scaffold_10-snap.2864-T1 Valid prediction for Augustus_model.g17698.t1 Valid prediction for GlimmerHMM_glimmerT_26368-T1 Valid prediction for GeneMark_model.45219_t Valid prediction for GeneMark_model.45275_t Valid prediction for GeneMark_model.45241_t Valid prediction for GlimmerHMM_glimmerT_26370-T1 Valid prediction for GeneMark_model.45229_t Valid prediction for GeneMark_model.45212_t Valid prediction for GeneMark_model.45183_t Valid prediction for snap_scaffold_10-snap.2842-T1 Valid prediction for GlimmerHMM_glimmerT_26359-T1 Valid prediction for snap_scaffold_10-snap.2836-T1 Couldn't classify 184797, 185320 Sorry, prediction GeneMark_model.45245_t fails validation. (ATG) CC 184697-184713 GT TTG (GAA) AG 184797-185320 GT CTG -recovered GeneMark_model.45245_t, initial, 184697, 184713 -recovered GeneMark_model.45245_t, internal, 184797, 185320 Valid prediction for GeneMark_model.45265_t Valid prediction for snap_scaffold_10-snap.2833-T1 Valid prediction for GlimmerHMM_glimmerT_26352-T1 Valid prediction for GeneMark_model.45256_t Valid prediction for GlimmerHMM_glimmerT_26362-T1 Valid prediction for GlimmerHMM_glimmerT_26373-T1 Valid prediction for snap_scaffold_10-snap.2869-T1 Valid prediction for HiQ_model.g17692.t1 Valid prediction for GeneMark_model.45174_t Valid prediction for GeneMark_model.45184_t Couldn't classify 191545, 191625 Sorry, prediction GeneMark_model.45246_t fails validation. (GAT) AG 191545-191625 GT GAG (AAT) AG 191659-191790 GT AAG (AAG) AG 191812-191853 GT AAG (AGA) AG 191896-191923 AA AGA -recovered GeneMark_model.45246_t, terminal, 191896, 191923 -recovered GeneMark_model.45246_t, internal, 191545, 191625 -recovered GeneMark_model.45246_t, internal, 191659, 191790 -recovered GeneMark_model.45246_t, internal, 191812, 191853 Valid prediction for snap_scaffold_10-snap.2828-T1 Valid prediction for snap_scaffold_10-snap.2872-T1 Valid prediction for GlimmerHMM_glimmerT_26346-T1 Valid prediction for Augustus_model.g17689.t1 Valid prediction for GlimmerHMM_glimmerT_26366-T1 Valid prediction for GeneMark_model.45205_t Valid prediction for GeneMark_model.45167_t Valid prediction for GeneMark_model.45293_t Valid prediction for GeneMark_model.45253_t Valid prediction for GeneMark_model.45228_t Valid prediction for GeneMark_model.45224_t Valid prediction for GeneMark_model.45281_t Valid prediction for GeneMark_model.45264_t Valid prediction for snap_scaffold_10-snap.2840-T1 Valid prediction for snap_scaffold_10-snap.2874-T1 Valid prediction for GeneMark_model.45191_t Valid prediction for GeneMark_model.45177_t Valid prediction for snap_scaffold_10-snap.2867-T1 Valid prediction for GeneMark_model.45258_t Valid prediction for GeneMark_model.45222_t Valid prediction for GeneMark_model.45200_t Valid prediction for snap_scaffold_10-snap.2856-T1 Valid prediction for GeneMark_model.45210_t Valid prediction for Augustus_model.g17687.t1 Valid prediction for GlimmerHMM_glimmerT_26374-T1 Valid prediction for snap_scaffold_10-snap.2870-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GeneMark_model.45214_t Valid prediction for Augustus_model.g17685.t1 Valid prediction for GeneMark_model.45248_t Valid prediction for GeneMark_model.45285_t Valid prediction for Augustus_model.g17696.t1 Valid prediction for GlimmerHMM_glimmerT_26363-T1 Valid prediction for GeneMark_model.45199_t Valid prediction for GeneMark_model.45207_t Couldn't classify 35844, 35876 Sorry, prediction pasa_asmbl_5080.p1 fails validation. (CCA) GA 35844-35876 GT AGG (GAA) AG 38380-38402 GT AAG (TAA) AG 40286-40309 GT CCG (AAA) AG 40485-40505 GT AGG (CTT) AG 41457-41629 GT GGG (ACC) AG 42023-42053 GT AAG (GGT) AG 44054-44150 AC AGA -recovered pasa_asmbl_5080.p1, terminal, 44054, 44150 -recovered pasa_asmbl_5080.p1, internal, 38380, 38402 -recovered pasa_asmbl_5080.p1, internal, 40286, 40309 -recovered pasa_asmbl_5080.p1, internal, 40485, 40505 -recovered pasa_asmbl_5080.p1, internal, 41457, 41629 -recovered pasa_asmbl_5080.p1, internal, 42023, 42053 Valid prediction for GlimmerHMM_glimmerT_26349-T1 Valid prediction for snap_scaffold_10-snap.2884-T1 Valid prediction for GlimmerHMM_glimmerT_26367-T1 Valid prediction for GeneMark_model.45165_t Valid prediction for snap_scaffold_10-snap.2865-T1 Valid prediction for GeneMark_model.45233_t Valid prediction for GlimmerHMM_glimmerT_26343-T1 Valid prediction for snap_scaffold_10-snap.2849-T1 Valid prediction for GeneMark_model.45202_t Valid prediction for GeneMark_model.45242_t Valid prediction for snap_scaffold_10-snap.2843-T1 Valid prediction for GeneMark_model.45279_t Valid prediction for GeneMark_model.45260_t Valid prediction for snap_scaffold_10-snap.2839-T1 Valid prediction for snap_scaffold_10-snap.2832-T1 Valid prediction for GeneMark_model.45295_t Valid prediction for GlimmerHMM_glimmerT_26354-T1 Valid prediction for snap_scaffold_10-snap.2887-T1 Valid prediction for GeneMark_model.45189_t Valid prediction for GeneMark_model.45254_t Valid prediction for GeneMark_model.45226_t Valid prediction for GlimmerHMM_glimmerT_26348-T1 Valid prediction for GeneMark_model.45282_t Valid prediction for snap_scaffold_10-snap.2871-T1 Valid prediction for GeneMark_model.45252_t Valid prediction for GeneMark_model.45235_t Valid prediction for Augustus_model.g17690.t1 Valid prediction for GeneMark_model.45240_t Valid prediction for GlimmerHMM_glimmerT_26350-T1 Valid prediction for GeneMark_model.45277_t Valid prediction for snap_scaffold_10-snap.2861-T1 Valid prediction for GeneMark_model.45187_t Valid prediction for GeneMark_model.45239_t Valid prediction for GeneMark_model.45171_t Valid prediction for snap_scaffold_10-snap.2876-T1 Valid prediction for snap_scaffold_10-snap.2857-T1 Valid prediction for GeneMark_model.45262_t Valid prediction for GeneMark_model.45271_t Valid prediction for GeneMark_model.45267_t Valid prediction for snap_scaffold_10-snap.2846-T1 Valid prediction for GlimmerHMM_glimmerT_26339-T1 Couldn't classify 138967, 139097 Sorry, prediction pasa_asmbl_4915.p1 fails validation. (ATG) CC 132585-132665 GT GGG (GAC) AG 133480-133588 GT TGG (AGT) AG 136172-136268 GT AGG (GTA) AG 136963-137101 GT TGG (GTC) AG 137197-137389 GT GGG (GCT) AG 137703-138000 GT AGG (TGA) AG 138378-138553 GT AGG (GTA) AG 138967-139097 GT AGG -recovered pasa_asmbl_4915.p1, initial, 132585, 132665 -recovered pasa_asmbl_4915.p1, internal, 133480, 133588 -recovered pasa_asmbl_4915.p1, internal, 136172, 136268 -recovered pasa_asmbl_4915.p1, internal, 136963, 137101 -recovered pasa_asmbl_4915.p1, internal, 137197, 137389 -recovered pasa_asmbl_4915.p1, internal, 137703, 138000 -recovered pasa_asmbl_4915.p1, internal, 138378, 138553 -recovered pasa_asmbl_4915.p1, internal, 138967, 139097 Valid prediction for snap_scaffold_10-snap.2886-T1 Valid prediction for GeneMark_model.45169_t Valid prediction for GeneMark_model.45286_t Valid prediction for GeneMark_model.45193_t Valid prediction for snap_scaffold_10-snap.2855-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_26342-T1 Valid prediction for GeneMark_model.45284_t Valid prediction for GeneMark_model.45273_t Valid prediction for snap_scaffold_10-snap.2883-T1 Valid prediction for GlimmerHMM_glimmerT_26358-T1 Valid prediction for GeneMark_model.45196_t Valid prediction for GeneMark_model.45269_t Valid prediction for GeneMark_model.45251_t Valid prediction for GeneMark_model.45237_t Valid prediction for GlimmerHMM_glimmerT_26371-T1 Valid prediction for GeneMark_model.45292_t Valid prediction for snap_scaffold_10-snap.2880-T1 Valid prediction for GeneMark_model.45194_t Valid prediction for GeneMark_model.45209_t Valid prediction for GeneMark_model.45217_t Valid prediction for GlimmerHMM_glimmerT_26372-T1 Valid prediction for Augustus_model.g17688.t1 Valid prediction for snap_scaffold_10-snap.2821-T1 Valid prediction for snap_scaffold_10-snap.2826-T1 Valid prediction for GlimmerHMM_glimmerT_26344-T1 Valid prediction for snap_scaffold_10-snap.2852-T1 Sorry, intron length (9) is less than minimum required (10) -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.45290_t Valid prediction for GlimmerHMM_glimmerT_26353-T1 Valid prediction for GeneMark_model.45216_t Valid prediction for GlimmerHMM_glimmerT_26357-T1 Valid prediction for snap_scaffold_10-snap.2879-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_10-snap.2837-T1 Valid prediction for GeneMark_model.45263_t Valid prediction for GeneMark_model.45247_t Valid prediction for snap_scaffold_10-snap.2830-T1 Valid prediction for snap_scaffold_10-snap.2858-T1 Valid prediction for GeneMark_model.45223_t Valid prediction for GlimmerHMM_glimmerT_26345-T1 Valid prediction for GeneMark_model.45208_t Valid prediction for snap_scaffold_10-snap.2873-T1 Valid prediction for snap_scaffold_10-snap.2844-T1 Valid prediction for snap_scaffold_10-snap.2862-T1 Valid prediction for snap_scaffold_10-snap.2866-T1 Valid prediction for snap_scaffold_10-snap.2878-T1 Valid prediction for Augustus_model.g17683.t1 Valid prediction for GeneMark_model.45170_t Valid prediction for GeneMark_model.45192_t Valid prediction for GeneMark_model.45185_t Valid prediction for GeneMark_model.45181_t Valid prediction for snap_scaffold_10-snap.2825-T1 Valid prediction for GeneMark_model.45182_t Valid prediction for Augustus_model.g17694.t1 Valid prediction for snap_scaffold_10-snap.2882-T1 Valid prediction for GlimmerHMM_glimmerT_26356-T1 Valid prediction for GlimmerHMM_glimmerT_26341-T1 Valid prediction for GeneMark_model.45259_t Valid prediction for GeneMark_model.45215_t Valid prediction for GlimmerHMM_glimmerT_26355-T1 Valid prediction for GlimmerHMM_glimmerT_26340-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GeneMark_model.45172_t Valid prediction for GeneMark_model.45173_t Valid prediction for GeneMark_model.45203_t Valid prediction for GlimmerHMM_glimmerT_26360-T1 Valid prediction for snap_scaffold_10-snap.2863-T1 Valid prediction for GeneMark_model.45197_t Valid prediction for GeneMark_model.45280_t Valid prediction for snap_scaffold_10-snap.2835-T1 Valid prediction for snap_scaffold_10-snap.2823-T1 Valid prediction for snap_scaffold_10-snap.2834-T1 Valid prediction for snap_scaffold_10-snap.2853-T1 Valid prediction for GeneMark_model.45270_t Valid prediction for snap_scaffold_10-snap.2885-T1 Valid prediction for snap_scaffold_10-snap.2829-T1 Valid prediction for snap_scaffold_10-snap.2848-T1 Valid prediction for GeneMark_model.45268_t Valid prediction for GeneMark_model.45190_t Valid prediction for GeneMark_model.45231_t Valid prediction for Augustus_model.g17691.t1 Valid prediction for Augustus_model.g17700.t1 Valid prediction for snap_scaffold_10-snap.2847-T1 Valid prediction for GeneMark_model.45220_t Valid prediction for GeneMark_model.45238_t Valid prediction for GeneMark_model.45221_t Valid prediction for GeneMark_model.45168_t Valid prediction for GeneMark_model.45236_t Valid prediction for GeneMark_model.45250_t Valid prediction for GlimmerHMM_glimmerT_26351-T1 Valid prediction for GeneMark_model.45186_t Valid prediction for snap_scaffold_10-snap.2841-T1 Valid prediction for GeneMark_model.45166_t Valid prediction for GeneMark_model.45227_t Valid prediction for snap_scaffold_10-snap.2868-T1 Valid prediction for GeneMark_model.45198_t Valid prediction for GeneMark_model.45234_t Valid prediction for GeneMark_model.45278_t Valid prediction for snap_scaffold_10-snap.2875-T1 Valid prediction for snap_scaffold_10-snap.2845-T1 Valid prediction for GeneMark_model.45175_t Valid prediction for GeneMark_model.45283_t Valid prediction for GeneMark_model.45257_t Valid prediction for GeneMark_model.45225_t Valid prediction for GeneMark_model.45206_t Valid prediction for snap_scaffold_10-snap.2822-T1 Valid prediction for GeneMark_model.45294_t Valid prediction for GeneMark_model.45255_t Valid prediction for Augustus_model.g17693.t1 Valid prediction for GeneMark_model.45180_t Valid prediction for GeneMark_model.45261_t Valid prediction for GeneMark_model.45266_t Valid prediction for GeneMark_model.45287_t Valid prediction for GeneMark_model.45211_t Valid prediction for GlimmerHMM_glimmerT_26364-T1 Valid prediction for snap_scaffold_10-snap.2851-T1 Valid prediction for GeneMark_model.45201_t Valid prediction for snap_scaffold_10-snap.2827-T1 Valid prediction for GeneMark_model.45213_t Valid prediction for Augustus_model.g17686.t1 Valid prediction for GeneMark_model.45288_t Valid prediction for GeneMark_model.45272_t Valid prediction for GeneMark_model.45176_t Valid prediction for snap_scaffold_10-snap.2831-T1 Valid prediction for Augustus_model.g17695.t1 Valid prediction for GeneMark_model.45276_t Valid prediction for snap_scaffold_10-snap.2850-T1 Valid prediction for GeneMark_model.45249_t Valid prediction for GeneMark_model.45188_t Valid prediction for GeneMark_model.45230_t Valid prediction for GlimmerHMM_glimmerT_26369-T1 Valid prediction for snap_scaffold_10-snap.2877-T1 Valid prediction for Augustus_model.g17699.t1 Valid prediction for GeneMark_model.45244_t Valid prediction for GlimmerHMM_glimmerT_26361-T1 Valid prediction for GeneMark_model.45164_t Valid prediction for GeneMark_model.45195_t Valid prediction for snap_scaffold_10-snap.2854-T1 Valid prediction for GeneMark_model.45291_t Valid prediction for GeneMark_model.45274_t Valid prediction for snap_scaffold_10-snap.2824-T1 Valid prediction for GlimmerHMM_glimmerT_26347-T1 Valid prediction for GeneMark_model.45218_t Valid prediction for snap_scaffold_10-snap.2859-T1 Valid prediction for snap_scaffold_10-snap.2881-T1 Valid prediction for GeneMark_model.45232_t Valid prediction for Augustus_model.g17697.t1 Valid prediction for GeneMark_model.45243_t Valid prediction for GeneMark_model.45178_t Valid prediction for Augustus_model.g17684.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15675, rend_intergenic: 7948 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25370, rend_intergenic: 21621 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25846, rend_intergenic: 25544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46779, rend_intergenic: 26248 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 51255, rend_intergenic: 46794 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55869, rend_intergenic: 51494 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62775, rend_intergenic: 57988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77693, rend_intergenic: 63401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80936, rend_intergenic: 77717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101480, rend_intergenic: 81164 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104696, rend_intergenic: 102278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108259, rend_intergenic: 106542 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117467, rend_intergenic: 109470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123879, rend_intergenic: 117926 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140548, rend_intergenic: 130001 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178039, rend_intergenic: 147518 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184731, rend_intergenic: 178118 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194386, rend_intergenic: 184734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199777, rend_intergenic: 194721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203061, rend_intergenic: 200567 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209487, rend_intergenic: 203943 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220075, rend_intergenic: 209506 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244646, rend_intergenic: 221091 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251267, rend_intergenic: 245055 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257961, rend_intergenic: 251270 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266920, rend_intergenic: 259284 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287995, rend_intergenic: 276725 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 304856, rend_intergenic: 291750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 309288, rend_intergenic: 306736 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 316291 -exon list size: 1624 building trellis 0.1 0.1 0.2 0.2 0.3 0.4 0.4 0.5 0.6 0.6 0.7 0.7 0.8 0.9 0.9 1.0 1.0 1.1 1.2 1.2 1.3 1.4 1.4 1.5 1.5 1.6 1.7 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.3 2.4 2.5 2.5 2.6 2.6 2.7 2.8 2.8 2.9 3.0 3.0 3.1 3.1 3.2 3.3 3.3 3.4 3.4 3.5 3.6 3.6 3.7 3.8 3.8 3.9 3.9 4.0 4.1 4.1 4.2 4.2 4.3 4.4 4.4 4.5 4.6 4.6 4.7 4.7 4.8 4.9 4.9 5.0 5.0 5.1 5.2 5.2 5.3 5.4 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.8 5.9 6.0 6.0 6.1 6.2 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.6 6.7 6.8 6.8 6.9 6.9 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.4 7.5 7.6 7.6 7.7 7.7 7.8 7.9 7.9 8.0 8.1 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.5 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.0 9.1 9.2 9.2 9.3 9.3 9.4 9.5 9.5 9.6 9.7 9.7 9.8 9.8 9.9 10.0 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.6 10.7 10.8 10.8 10.9 10.9 11.0 11.1 11.1 11.2 11.3 11.3 11.4 11.4 11.5 11.6 11.6 11.7 11.7 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.2 12.3 12.4 12.4 12.5 12.5 12.6 12.7 12.7 12.8 12.9 12.9 13.0 13.0 13.1 13.2 13.2 13.3 13.3 13.4 13.5 13.5 13.6 13.7 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.1 14.2 14.3 14.3 14.4 14.5 14.5 14.6 14.6 14.7 14.8 14.8 14.9 14.9 15.0 15.1 15.1 15.2 15.3 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.7 15.8 15.9 15.9 16.0 16.1 16.1 16.2 16.2 16.3 16.4 16.4 16.5 16.5 16.6 16.7 16.7 16.8 16.9 16.9 17.0 17.0 17.1 17.2 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.7 17.7 17.8 17.8 17.9 18.0 18.0 18.1 18.1 18.2 18.3 18.3 18.4 18.5 18.5 18.6 18.6 18.7 18.8 18.8 18.9 18.9 19.0 19.1 19.1 19.2 19.2 19.3 19.4 19.4 19.5 19.6 19.6 19.7 19.7 19.8 19.9 19.9 20.0 20.0 20.1 20.2 20.2 20.3 20.4 20.4 20.5 20.5 20.6 20.7 20.7 20.8 20.8 20.9 21.0 21.0 21.1 21.2 21.2 21.3 21.3 21.4 21.5 21.5 21.6 21.6 21.7 21.8 21.8 21.9 22.0 22.0 22.1 22.1 22.2 22.3 22.3 22.4 22.4 22.5 22.6 22.6 22.7 22.8 22.8 22.9 22.9 23.0 23.1 23.1 23.2 23.2 23.3 23.4 23.4 23.5 23.6 23.6 23.7 23.7 23.8 23.9 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.5 24.6 24.7 24.7 24.8 24.8 24.9 25.0 25.0 25.1 25.2 25.2 25.3 25.3 25.4 25.5 25.5 25.6 25.6 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.4 26.5 26.6 26.6 26.7 26.8 26.8 26.9 26.9 27.0 27.1 27.1 27.2 27.2 27.3 27.4 27.4 27.5 27.6 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.0 28.1 28.2 28.2 28.3 28.4 28.4 28.5 28.5 28.6 28.7 28.7 28.8 28.8 28.9 29.0 29.0 29.1 29.2 29.2 29.3 29.3 29.4 29.5 29.5 29.6 29.6 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.1 30.2 30.3 30.3 30.4 30.4 30.5 30.6 30.6 30.7 30.8 30.8 30.9 30.9 31.0 31.1 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.5 31.6 31.7 31.7 31.8 31.9 31.9 32.0 32.0 32.1 32.2 32.2 32.3 32.3 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.8 32.9 33.0 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.5 33.5 33.6 33.6 33.7 33.8 33.8 33.9 33.9 34.0 34.1 34.1 34.2 34.3 34.3 34.4 34.4 34.5 34.6 34.6 34.7 34.7 34.8 34.9 34.9 35.0 35.1 35.1 35.2 35.2 35.3 35.4 35.4 35.5 35.5 35.6 35.7 35.7 35.8 35.9 35.9 36.0 36.0 36.1 36.2 36.2 36.3 36.3 36.4 36.5 36.5 36.6 36.7 36.7 36.8 36.8 36.9 37.0 37.0 37.1 37.1 37.2 37.3 37.3 37.4 37.5 37.5 37.6 37.6 37.7 37.8 37.8 37.9 37.9 38.0 38.1 38.1 38.2 38.3 38.3 38.4 38.4 38.5 38.6 38.6 38.7 38.7 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.2 39.3 39.4 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.0 40.1 40.2 40.2 40.3 40.3 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.8 40.9 41.0 41.0 41.1 41.1 41.2 41.3 41.3 41.4 41.5 41.5 41.6 41.6 41.7 41.8 41.8 41.9 41.9 42.0 42.1 42.1 42.2 42.3 42.3 42.4 42.4 42.5 42.6 42.6 42.7 42.7 42.8 42.9 42.9 43.0 43.1 43.1 43.2 43.2 43.3 43.4 43.4 43.5 43.5 43.6 43.7 43.7 43.8 43.8 43.9 44.0 44.0 44.1 44.2 44.2 44.3 44.3 44.4 44.5 44.5 44.6 44.6 44.7 44.8 44.8 44.9 45.0 45.0 45.1 45.1 45.2 45.3 45.3 45.4 45.4 45.5 45.6 45.6 45.7 45.8 45.8 45.9 45.9 46.0 46.1 46.1 46.2 46.2 46.3 46.4 46.4 46.5 46.6 46.6 46.7 46.7 46.8 46.9 46.9 47.0 47.0 47.1 47.2 47.2 47.3 47.4 47.4 47.5 47.5 47.6 47.7 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.2 48.2 48.3 48.3 48.4 48.5 48.5 48.6 48.6 48.7 48.8 48.8 48.9 49.0 49.0 49.1 49.1 49.2 49.3 49.3 49.4 49.4 49.5 49.6 49.6 49.7 49.8 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.2 50.3 50.4 50.4 50.5 50.6 50.6 50.7 50.7 50.8 50.9 50.9 51.0 51.0 51.1 51.2 51.2 51.3 51.4 51.4 51.5 51.5 51.6 51.7 51.7 51.8 51.8 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.3 52.4 52.5 52.5 52.6 52.6 52.7 52.8 52.8 52.9 53.0 53.0 53.1 53.1 53.2 53.3 53.3 53.4 53.4 53.5 53.6 53.6 53.7 53.8 53.8 53.9 53.9 54.0 54.1 54.1 54.2 54.2 54.3 54.4 54.4 54.5 54.6 54.6 54.7 54.7 54.8 54.9 54.9 55.0 55.0 55.1 55.2 55.2 55.3 55.4 55.4 55.5 55.5 55.6 55.7 55.7 55.8 55.8 55.9 56.0 56.0 56.1 56.2 56.2 56.3 56.3 56.4 56.5 56.5 56.6 56.6 56.7 56.8 56.8 56.9 56.9 57.0 57.1 57.1 57.2 57.3 57.3 57.4 57.4 57.5 57.6 57.6 57.7 57.7 57.8 57.9 57.9 58.0 58.1 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.5 58.6 58.7 58.7 58.8 58.9 58.9 59.0 59.0 59.1 59.2 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.7 59.7 59.8 59.8 59.9 60.0 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.6 60.7 60.8 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.3 61.3 61.4 61.4 61.5 61.6 61.6 61.7 61.7 61.8 61.9 61.9 62.0 62.1 62.1 62.2 62.2 62.3 62.4 62.4 62.5 62.5 62.6 62.7 62.7 62.8 62.9 62.9 63.0 63.0 63.1 63.2 63.2 63.3 63.3 63.4 63.5 63.5 63.6 63.7 63.7 63.8 63.8 63.9 64.0 64.0 64.1 64.1 64.2 64.3 64.3 64.4 64.5 64.5 64.6 64.6 64.7 64.8 64.8 64.9 64.9 65.0 65.1 65.1 65.2 65.3 65.3 65.4 65.4 65.5 65.6 65.6 65.7 65.7 65.8 65.9 65.9 66.0 66.1 66.1 66.2 66.2 66.3 66.4 66.4 66.5 66.5 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.0 67.1 67.2 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.7 67.7 67.8 67.8 67.9 68.0 68.0 68.1 68.1 68.2 68.3 68.3 68.4 68.5 68.5 68.6 68.6 68.7 68.8 68.8 68.9 68.9 69.0 69.1 69.1 69.2 69.2 69.3 69.4 69.4 69.5 69.6 69.6 69.7 69.7 69.8 69.9 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.4 70.4 70.5 70.5 70.6 70.7 70.7 70.8 70.8 70.9 71.0 71.0 71.1 71.2 71.2 71.3 71.3 71.4 71.5 71.5 71.6 71.6 71.7 71.8 71.8 71.9 72.0 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.4 72.5 72.6 72.6 72.7 72.8 72.8 72.9 72.9 73.0 73.1 73.1 73.2 73.2 73.3 73.4 73.4 73.5 73.6 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.4 74.4 74.5 74.5 74.6 74.7 74.7 74.8 74.8 74.9 75.0 75.0 75.1 75.2 75.2 75.3 75.3 75.4 75.5 75.5 75.6 75.6 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.1 76.2 76.3 76.3 76.4 76.4 76.5 76.6 76.6 76.7 76.8 76.8 76.9 76.9 77.0 77.1 77.1 77.2 77.2 77.3 77.4 77.4 77.5 77.6 77.6 77.7 77.7 77.8 77.9 77.9 78.0 78.0 78.1 78.2 78.2 78.3 78.4 78.4 78.5 78.5 78.6 78.7 78.7 78.8 78.8 78.9 79.0 79.0 79.1 79.2 79.2 79.3 79.3 79.4 79.5 79.5 79.6 79.6 79.7 79.8 79.8 79.9 80.0 80.0 80.1 80.1 80.2 80.3 80.3 80.4 80.4 80.5 80.6 80.6 80.7 80.8 80.8 80.9 80.9 81.0 81.1 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.5 81.6 81.7 81.7 81.8 81.9 81.9 82.0 82.0 82.1 82.2 82.2 82.3 82.3 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.8 82.9 83.0 83.0 83.1 83.1 83.2 83.3 83.3 83.4 83.5 83.5 83.6 83.6 83.7 83.8 83.8 83.9 83.9 84.0 84.1 84.1 84.2 84.3 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.7 84.8 84.9 84.9 85.0 85.1 85.1 85.2 85.2 85.3 85.4 85.4 85.5 85.5 85.6 85.7 85.7 85.8 85.9 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.3 86.4 86.5 86.5 86.6 86.7 86.7 86.8 86.8 86.9 87.0 87.0 87.1 87.1 87.2 87.3 87.3 87.4 87.5 87.5 87.6 87.6 87.7 87.8 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.3 88.3 88.4 88.4 88.5 88.6 88.6 88.7 88.7 88.8 88.9 88.9 89.0 89.1 89.1 89.2 89.2 89.3 89.4 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.0 90.1 90.2 90.2 90.3 90.3 90.4 90.5 90.5 90.6 90.7 90.7 90.8 90.8 90.9 91.0 91.0 91.1 91.1 91.2 91.3 91.3 91.4 91.5 91.5 91.6 91.6 91.7 91.8 91.8 91.9 91.9 92.0 92.1 92.1 92.2 92.3 92.3 92.4 92.4 92.5 92.6 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.1 93.1 93.2 93.2 93.3 93.4 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.8 93.9 94.0 94.0 94.1 94.2 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.6 94.7 94.8 94.8 94.9 95.0 95.0 95.1 95.1 95.2 95.3 95.3 95.4 95.4 95.5 95.6 95.6 95.7 95.8 95.8 95.9 95.9 96.0 96.1 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.6 96.6 96.7 96.7 96.8 96.9 96.9 97.0 97.0 97.1 97.2 97.2 97.3 97.4 97.4 97.5 97.5 97.6 97.7 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.3 98.4 98.5 98.5 98.6 98.6 98.7 98.8 98.8 98.9 99.0 99.0 99.1 99.1 99.2 99.3 99.3 99.4 99.4 99.5 99.6 99.6 99.7 99.8 99.8 99.9 99.9 -found 73 predictions from path traversal Error with prediction: snap lend_intergenic: 15675, rend_intergenic: 7948 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25370, rend_intergenic: 21621 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25846, rend_intergenic: 25544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46779, rend_intergenic: 26248 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 51255, rend_intergenic: 46794 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55869, rend_intergenic: 51494 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62775, rend_intergenic: 57988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77693, rend_intergenic: 63401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 80936, rend_intergenic: 77717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101480, rend_intergenic: 81164 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 104696, rend_intergenic: 102278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108259, rend_intergenic: 106542 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117467, rend_intergenic: 109470 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123879, rend_intergenic: 117926 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140548, rend_intergenic: 130001 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178039, rend_intergenic: 147518 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184731, rend_intergenic: 178118 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194386, rend_intergenic: 184734 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199777, rend_intergenic: 194721 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203061, rend_intergenic: 200567 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209487, rend_intergenic: 203943 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220075, rend_intergenic: 209506 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244646, rend_intergenic: 221091 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251267, rend_intergenic: 245055 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 257961, rend_intergenic: 251270 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266920, rend_intergenic: 259284 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 287995, rend_intergenic: 276725 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 304856, rend_intergenic: 291750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 309288, rend_intergenic: 306736 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 16 predictions persist after filtering for low support -building DP trellis -building trellis in range 1 - 11578 -exon list size: 40 building trellis 2.4 4.8 7.1 9.5 11.9 14.3 16.7 19.0 21.4 23.8 26.2 28.6 31.0 33.3 35.7 38.1 40.5 42.9 45.2 47.6 50.0 52.4 54.8 57.1 59.5 61.9 64.3 66.7 69.0 71.4 73.8 76.2 78.6 81.0 83.3 85.7 88.1 90.5 92.9 95.2 97.6 -found 3 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support -building DP trellis -building trellis in range 287028 - 316291 -exon list size: 105 building trellis 0.9 1.9 2.8 3.7 4.7 5.6 6.5 7.5 8.4 9.3 10.3 11.2 12.1 13.1 14.0 15.0 15.9 16.8 17.8 18.7 19.6 20.6 21.5 22.4 23.4 24.3 25.2 26.2 27.1 28.0 29.0 29.9 30.8 31.8 32.7 33.6 34.6 35.5 36.4 37.4 38.3 39.3 40.2 41.1 42.1 43.0 43.9 44.9 45.8 46.7 47.7 48.6 49.5 50.5 51.4 52.3 53.3 54.2 55.1 56.1 57.0 57.9 58.9 59.8 60.7 61.7 62.6 63.6 64.5 65.4 66.4 67.3 68.2 69.2 70.1 71.0 72.0 72.9 73.8 74.8 75.7 76.6 77.6 78.5 79.4 80.4 81.3 82.2 83.2 84.1 85.0 86.0 86.9 87.9 88.8 89.7 90.7 91.6 92.5 93.5 94.4 95.3 96.3 97.2 98.1 99.1 -found 2 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 296534 - 316291 -exon list size: 56 building trellis 1.7 3.4 5.2 6.9 8.6 10.3 12.1 13.8 15.5 17.2 19.0 20.7 22.4 24.1 25.9 27.6 29.3 31.0 32.8 34.5 36.2 37.9 39.7 41.4 43.1 44.8 46.6 48.3 50.0 51.7 53.4 55.2 56.9 58.6 60.3 62.1 63.8 65.5 67.2 69.0 70.7 72.4 74.1 75.9 77.6 79.3 81.0 82.8 84.5 86.2 87.9 89.7 91.4 93.1 94.8 96.6 98.3 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 296534 - 308150 -exon list size: 36 building trellis 2.6 5.3 7.9 10.5 13.2 15.8 18.4 21.1 23.7 26.3 28.9 31.6 34.2 36.8 39.5 42.1 44.7 47.4 50.0 52.6 55.3 57.9 60.5 63.2 65.8 68.4 71.1 73.7 76.3 78.9 81.6 84.2 86.8 89.5 92.1 94.7 97.4 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support