-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_10/scaffold_10_12398739-12711030

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g17475.t1
Valid prediction for GeneMark_model.44714_t
Valid prediction for Augustus_model.g17480.t1
Valid prediction for GeneMark_model.44727_t
Valid prediction for GeneMark_model.44766_t
Valid prediction for GeneMark_model.44741_t
Valid prediction for snap_scaffold_10-snap.2433-T1
Valid prediction for GeneMark_model.44685_t
Valid prediction for GeneMark_model.44723_t
Valid prediction for snap_scaffold_10-snap.2457-T1
Valid prediction for snap_scaffold_10-snap.2477-T1
Valid prediction for GeneMark_model.44731_t
Valid prediction for GeneMark_model.44772_t
Valid prediction for GlimmerHMM_glimmerT_26095-T1
Valid prediction for snap_scaffold_10-snap.2422-T1
Valid prediction for snap_scaffold_10-snap.2442-T1
Valid prediction for GlimmerHMM_glimmerT_26092-T1
Valid prediction for GeneMark_model.44774_t
Valid prediction for GeneMark_model.44680_t
Valid prediction for snap_scaffold_10-snap.2473-T1
Valid prediction for snap_scaffold_10-snap.2427-T1
Valid prediction for GeneMark_model.44753_t
Valid prediction for GeneMark_model.44718_t
Valid prediction for snap_scaffold_10-snap.2465-T1
Valid prediction for GeneMark_model.44756_t
Valid prediction for GeneMark_model.44758_t
Valid prediction for GeneMark_model.44762_t
Valid prediction for Augustus_model.g17483.t1
Valid prediction for GlimmerHMM_glimmerT_26096-T1
Valid prediction for CodingQuarry_transcript_5583-T1
Valid prediction for GeneMark_model.44778_t
Valid prediction for GeneMark_model.44701_t
Valid prediction for GlimmerHMM_glimmerT_26098-T1
Valid prediction for GeneMark_model.44692_t
Valid prediction for snap_scaffold_10-snap.2472-T1
Valid prediction for GlimmerHMM_glimmerT_26104-T1
Valid prediction for snap_scaffold_10-snap.2478-T1
Valid prediction for GeneMark_model.44743_t
Valid prediction for snap_scaffold_10-snap.2475-T1
Valid prediction for snap_scaffold_10-snap.2458-T1
Valid prediction for Augustus_model.g17485.t1
Valid prediction for snap_scaffold_10-snap.2480-T1
Valid prediction for GeneMark_model.44721_t
Valid prediction for GlimmerHMM_glimmerT_26082-T1
Valid prediction for GeneMark_model.44764_t
Valid prediction for Augustus_model.g17490.t1
Valid prediction for GeneMark_model.44697_t
Valid prediction for snap_scaffold_10-snap.2431-T1
Valid prediction for GeneMark_model.44694_t
Valid prediction for snap_scaffold_10-snap.2470-T1
Valid prediction for GeneMark_model.44690_t
Valid prediction for Augustus_model.g17481.t1
Valid prediction for GeneMark_model.44711_t
Valid prediction for GeneMark_model.44702_t
Valid prediction for snap_scaffold_10-snap.2453-T1
Valid prediction for snap_scaffold_10-snap.2425-T1
Valid prediction for pasa_asmbl_4810.p1
Valid prediction for GeneMark_model.44733_t
Valid prediction for GlimmerHMM_glimmerT_26088-T1
Valid prediction for snap_scaffold_10-snap.2437-T1
Valid prediction for snap_scaffold_10-snap.2448-T1
Couldn't classify 268509, 268734
Couldn't classify 270983, 271229
Sorry, prediction pasa_asmbl_4807.p1 fails validation.
(AAC)	 CA	268509-268734	GT	CCG
(TAC)	 AG	268830-268906	GT	GGG
(GTA)	 AG	269197-269276	GT	CAG
(GAT)	 AG	269613-269742	GT	AGG
(TGT)	 AG	269916-270053	GT	AGG
(GTG)	 AG	270694-270767	GT	AGG
(TCT)	 AG	270983-271229	TG	GGT
-recovered pasa_asmbl_4807.p1, internal, 268830, 268906
-recovered pasa_asmbl_4807.p1, internal, 269197, 269276
-recovered pasa_asmbl_4807.p1, internal, 269613, 269742
-recovered pasa_asmbl_4807.p1, internal, 269916, 270053
-recovered pasa_asmbl_4807.p1, internal, 270694, 270767
Valid prediction for GlimmerHMM_glimmerT_26089-T1
Valid prediction for GlimmerHMM_glimmerT_26106-T1
Valid prediction for GeneMark_model.44720_t
Valid prediction for snap_scaffold_10-snap.2447-T1
Valid prediction for GlimmerHMM_glimmerT_26103-T1
Valid prediction for GlimmerHMM_glimmerT_26101-T1
Valid prediction for GeneMark_model.44725_t
Valid prediction for GeneMark_model.44683_t
Valid prediction for GlimmerHMM_glimmerT_26099-T1
Valid prediction for GeneMark_model.44696_t
Valid prediction for Augustus_model.g17487.t1
Valid prediction for GeneMark_model.44717_t
Valid prediction for GeneMark_model.44729_t
Valid prediction for GeneMark_model.44699_t
Valid prediction for GeneMark_model.44770_t
Valid prediction for GeneMark_model.44706_t
Valid prediction for GeneMark_model.44755_t
Valid prediction for GlimmerHMM_glimmerT_26090-T1
Valid prediction for GeneMark_model.44687_t
Valid prediction for snap_scaffold_10-snap.2468-T1
Valid prediction for Augustus_model.g17482.t1
Valid prediction for GeneMark_model.44735_t
Valid prediction for GlimmerHMM_glimmerT_26086-T1
Valid prediction for GeneMark_model.44689_t
Valid prediction for Augustus_model.g17479.t1
Valid prediction for GlimmerHMM_glimmerT_26093-T1
Valid prediction for snap_scaffold_10-snap.2450-T1
Valid prediction for GeneMark_model.44776_t
Valid prediction for snap_scaffold_10-snap.2460-T1
Valid prediction for GeneMark_model.44737_t
Valid prediction for GeneMark_model.44739_t
Valid prediction for GeneMark_model.44745_t
Valid prediction for GeneMark_model.44747_t
Valid prediction for GeneMark_model.44703_t
Valid prediction for Augustus_model.g17476.t1
Valid prediction for GeneMark_model.44749_t
Valid prediction for GeneMark_model.44768_t
Valid prediction for Augustus_model.g17486.t1
Valid prediction for GlimmerHMM_glimmerT_26097-T1
Valid prediction for GeneMark_model.44713_t
Valid prediction for GeneMark_model.44682_t
Valid prediction for snap_scaffold_10-snap.2469-T1
Valid prediction for GeneMark_model.44760_t
Valid prediction for Augustus_model.g17478.t1
Couldn't classify 273516, 273655
Sorry, prediction pasa_asmbl_4809.p1 fails validation.
(GAG)	 AC	273516-273655	GT	CGG
(GTC)	 AG	274903-274989	GT	AAG
(GTT)	 AG	275069-275155	GT	ATG
(CTA)	 AG	275850-276054	GT	TGG
(GCT)	 AG	276469-276654	GT	TGG
(GAT)	 AG	276733-276827	GT	TGG
(GCT)	 AG	276936-277200	GT	TGG
(GTA)	 AG	277555-277704	GT	GGG
(CTG)	 AG	278013-278117	GT	AGG
(CCG)	 AG	278213-278353	GT	AGG
(GCC)	 AG	278478-278597	GT	AGG
(ATG)	 AG	278740-278867	GT	AGG
(AGA)	 AG	279089-279155	CA	GAC
-recovered pasa_asmbl_4809.p1, initial, 278740, 278867
-recovered pasa_asmbl_4809.p1, terminal, 279089, 279155
-recovered pasa_asmbl_4809.p1, internal, 274903, 274989
-recovered pasa_asmbl_4809.p1, internal, 275069, 275155
-recovered pasa_asmbl_4809.p1, internal, 275850, 276054
-recovered pasa_asmbl_4809.p1, internal, 276469, 276654
-recovered pasa_asmbl_4809.p1, internal, 276733, 276827
-recovered pasa_asmbl_4809.p1, internal, 276936, 277200
-recovered pasa_asmbl_4809.p1, internal, 277555, 277704
-recovered pasa_asmbl_4809.p1, internal, 278013, 278117
-recovered pasa_asmbl_4809.p1, internal, 278213, 278353
-recovered pasa_asmbl_4809.p1, internal, 278478, 278597
-recovered pasa_asmbl_4809.p1, internal, 278740, 278867
Valid prediction for snap_scaffold_10-snap.2428-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_10-snap.2482-T1
Valid prediction for snap_scaffold_10-snap.2485-T1
Valid prediction for GeneMark_model.44750_t
Valid prediction for snap_scaffold_10-snap.2432-T1
Valid prediction for GeneMark_model.44781_t
Valid prediction for HiQ_model.g17491.t1
Valid prediction for snap_scaffold_10-snap.2429-T1
Valid prediction for GlimmerHMM_glimmerT_26091-T1
Valid prediction for snap_scaffold_10-snap.2439-T1
Valid prediction for snap_scaffold_10-snap.2440-T1
Valid prediction for GeneMark_model.44691_t
Valid prediction for GeneMark_model.44763_t
Valid prediction for GeneMark_model.44695_t
Valid prediction for snap_scaffold_10-snap.2476-T1
Valid prediction for GeneMark_model.44700_t
Valid prediction for GlimmerHMM_glimmerT_26107-T1
Valid prediction for snap_scaffold_10-snap.2443-T1
Valid prediction for GeneMark_model.44688_t
Valid prediction for snap_scaffold_10-snap.2436-T1
Valid prediction for snap_scaffold_10-snap.2434-T1
Valid prediction for GeneMark_model.44715_t
Valid prediction for GeneMark_model.44748_t
Valid prediction for snap_scaffold_10-snap.2449-T1
Valid prediction for snap_scaffold_10-snap.2441-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for Augustus_model.g17493.t1
Valid prediction for snap_scaffold_10-snap.2471-T1
Valid prediction for GeneMark_model.44771_t
Valid prediction for GeneMark_model.44716_t
Valid prediction for GeneMark_model.44752_t
Valid prediction for snap_scaffold_10-snap.2446-T1
Valid prediction for Augustus_model.g17489.t1
Valid prediction for GeneMark_model.44751_t
Valid prediction for snap_scaffold_10-snap.2438-T1
Valid prediction for snap_scaffold_10-snap.2474-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for snap_scaffold_10-snap.2467-T1
Valid prediction for snap_scaffold_10-snap.2459-T1
Valid prediction for GeneMark_model.44732_t
Valid prediction for GeneMark_model.44759_t
Valid prediction for snap_scaffold_10-snap.2424-T1
Valid prediction for snap_scaffold_10-snap.2452-T1
Valid prediction for snap_scaffold_10-snap.2435-T1
Valid prediction for CodingQuarry_transcript_5582-T1
Valid prediction for GeneMark_model.44728_t
Valid prediction for GlimmerHMM_glimmerT_26100-T1
Valid prediction for GeneMark_model.44780_t
Valid prediction for GeneMark_model.44698_t
Valid prediction for GeneMark_model.44686_t
Valid prediction for GeneMark_model.44710_t
Valid prediction for GeneMark_model.44730_t
Valid prediction for snap_scaffold_10-snap.2462-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_26094-T1
Valid prediction for pasa_asmbl_3721.p1
Valid prediction for snap_scaffold_10-snap.2445-T1
Valid prediction for GeneMark_model.44734_t
Valid prediction for snap_scaffold_10-snap.2464-T1
Valid prediction for GeneMark_model.44709_t
Valid prediction for Augustus_model.g17488.t1
Valid prediction for snap_scaffold_10-snap.2456-T1
Valid prediction for GeneMark_model.44681_t
Valid prediction for GlimmerHMM_glimmerT_26087-T1
Valid prediction for snap_scaffold_10-snap.2454-T1
Valid prediction for GeneMark_model.44693_t
Valid prediction for GeneMark_model.44704_t
Valid prediction for snap_scaffold_10-snap.2444-T1
Valid prediction for GeneMark_model.44769_t
Valid prediction for GeneMark_model.44767_t
Valid prediction for Augustus_model.g17477.t1
Valid prediction for GeneMark_model.44775_t
Valid prediction for GeneMark_model.44738_t
Valid prediction for snap_scaffold_10-snap.2479-T1
Valid prediction for GeneMark_model.44684_t
Valid prediction for snap_scaffold_10-snap.2463-T1
Valid prediction for GeneMark_model.44742_t
Valid prediction for GeneMark_model.44761_t
Valid prediction for GeneMark_model.44773_t
Valid prediction for GeneMark_model.44712_t
Valid prediction for GeneMark_model.44744_t
Valid prediction for GeneMark_model.44708_t
Valid prediction for GeneMark_model.44719_t
Valid prediction for GeneMark_model.44757_t
Valid prediction for GeneMark_model.44740_t
Valid prediction for CodingQuarry_transcript_5584-T1
Valid prediction for GlimmerHMM_glimmerT_26085-T1
Valid prediction for snap_scaffold_10-snap.2481-T1
Valid prediction for GeneMark_model.44765_t
Valid prediction for GlimmerHMM_glimmerT_26105-T1
Valid prediction for snap_scaffold_10-snap.2430-T1
Valid prediction for Augustus_model.g17492.t1
Valid prediction for Augustus_model.g17484.t1
Valid prediction for snap_scaffold_10-snap.2484-T1
Valid prediction for snap_scaffold_10-snap.2483-T1
Valid prediction for GlimmerHMM_glimmerT_26083-T1
Valid prediction for GeneMark_model.44736_t
Valid prediction for snap_scaffold_10-snap.2451-T1
Valid prediction for GeneMark_model.44779_t
Valid prediction for snap_scaffold_10-snap.2455-T1
Valid prediction for GeneMark_model.44707_t
Valid prediction for GeneMark_model.44777_t
Valid prediction for GeneMark_model.44754_t
Valid prediction for snap_scaffold_10-snap.2466-T1
Valid prediction for snap_scaffold_10-snap.2423-T1
Valid prediction for GeneMark_model.44746_t
Valid prediction for GeneMark_model.44705_t
Valid prediction for GlimmerHMM_glimmerT_26102-T1
Valid prediction for GeneMark_model.44726_t
Valid prediction for GeneMark_model.44722_t
Valid prediction for GeneMark_model.44724_t
Valid prediction for GeneMark_model.44679_t
Valid prediction for snap_scaffold_10-snap.2461-T1
Valid prediction for snap_scaffold_10-snap.2426-T1
Valid prediction for GlimmerHMM_glimmerT_26084-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 31272, rend_intergenic: 24663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38009, rend_intergenic: 31416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41489, rend_intergenic: 39728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46392, rend_intergenic: 41654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50522, rend_intergenic: 47426  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80950, rend_intergenic: 74587  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105272, rend_intergenic: 81937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161598, rend_intergenic: 106825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165487, rend_intergenic: 161846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175655, rend_intergenic: 165722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181940, rend_intergenic: 178994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187104, rend_intergenic: 183300  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206417, rend_intergenic: 187254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215630, rend_intergenic: 206515  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218818, rend_intergenic: 215646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219950, rend_intergenic: 219135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236874, rend_intergenic: 220898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241310, rend_intergenic: 238007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257695, rend_intergenic: 243867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266124, rend_intergenic: 263581  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 280235, rend_intergenic: 267780  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 288381, rend_intergenic: 283599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 312292
-exon list size: 1336


building trellis

0.1    
0.1    
0.2    
0.3    
0.4    
0.4    
0.5    
0.6    
0.7    
0.7    
0.8    
0.9    
1.0    
1.0    
1.1    
1.2    
1.3    
1.3    
1.4    
1.5    
1.6    
1.6    
1.7    
1.8    
1.9    
1.9    
2.0    
2.1    
2.2    
2.2    
2.3    
2.4    
2.5    
2.5    
2.6    
2.7    
2.8    
2.8    
2.9    
3.0    
3.1    
3.1    
3.2    
3.3    
3.4    
3.4    
3.5    
3.6    
3.7    
3.7    
3.8    
3.9    
4.0    
4.0    
4.1    
4.2    
4.3    
4.3    
4.4    
4.5    
4.6    
4.6    
4.7    
4.8    
4.9    
4.9    
5.0    
5.1    
5.2    
5.2    
5.3    
5.4    
5.5    
5.5    
5.6    
5.7    
5.8    
5.8    
5.9    
6.0    
6.1    
6.1    
6.2    
6.3    
6.4    
6.4    
6.5    
6.6    
6.7    
6.7    
6.8    
6.9    
7.0    
7.0    
7.1    
7.2    
7.2    
7.3    
7.4    
7.5    
7.5    
7.6    
7.7    
7.8    
7.8    
7.9    
8.0    
8.1    
8.1    
8.2    
8.3    
8.4    
8.4    
8.5    
8.6    
8.7    
8.7    
8.8    
8.9    
9.0    
9.0    
9.1    
9.2    
9.3    
9.3    
9.4    
9.5    
9.6    
9.6    
9.7    
9.8    
9.9    
9.9    
10.0    
10.1    
10.2    
10.2    
10.3    
10.4    
10.5    
10.5    
10.6    
10.7    
10.8    
10.8    
10.9    
11.0    
11.1    
11.1    
11.2    
11.3    
11.4    
11.4    
11.5    
11.6    
11.7    
11.7    
11.8    
11.9    
12.0    
12.0    
12.1    
12.2    
12.3    
12.3    
12.4    
12.5    
12.6    
12.6    
12.7    
12.8    
12.9    
12.9    
13.0    
13.1    
13.2    
13.2    
13.3    
13.4    
13.5    
13.5    
13.6    
13.7    
13.8    
13.8    
13.9    
14.0    
14.1    
14.1    
14.2    
14.3    
14.3    
14.4    
14.5    
14.6    
14.6    
14.7    
14.8    
14.9    
14.9    
15.0    
15.1    
15.2    
15.2    
15.3    
15.4    
15.5    
15.5    
15.6    
15.7    
15.8    
15.8    
15.9    
16.0    
16.1    
16.1    
16.2    
16.3    
16.4    
16.4    
16.5    
16.6    
16.7    
16.7    
16.8    
16.9    
17.0    
17.0    
17.1    
17.2    
17.3    
17.3    
17.4    
17.5    
17.6    
17.6    
17.7    
17.8    
17.9    
17.9    
18.0    
18.1    
18.2    
18.2    
18.3    
18.4    
18.5    
18.5    
18.6    
18.7    
18.8    
18.8    
18.9    
19.0    
19.1    
19.1    
19.2    
19.3    
19.4    
19.4    
19.5    
19.6    
19.7    
19.7    
19.8    
19.9    
20.0    
20.0    
20.1    
20.2    
20.3    
20.3    
20.4    
20.5    
20.6    
20.6    
20.7    
20.8    
20.9    
20.9    
21.0    
21.1    
21.2    
21.2    
21.3    
21.4    
21.4    
21.5    
21.6    
21.7    
21.7    
21.8    
21.9    
22.0    
22.0    
22.1    
22.2    
22.3    
22.3    
22.4    
22.5    
22.6    
22.6    
22.7    
22.8    
22.9    
22.9    
23.0    
23.1    
23.2    
23.2    
23.3    
23.4    
23.5    
23.5    
23.6    
23.7    
23.8    
23.8    
23.9    
24.0    
24.1    
24.1    
24.2    
24.3    
24.4    
24.4    
24.5    
24.6    
24.7    
24.7    
24.8    
24.9    
25.0    
25.0    
25.1    
25.2    
25.3    
25.3    
25.4    
25.5    
25.6    
25.6    
25.7    
25.8    
25.9    
25.9    
26.0    
26.1    
26.2    
26.2    
26.3    
26.4    
26.5    
26.5    
26.6    
26.7    
26.8    
26.8    
26.9    
27.0    
27.1    
27.1    
27.2    
27.3    
27.4    
27.4    
27.5    
27.6    
27.7    
27.7    
27.8    
27.9    
28.0    
28.0    
28.1    
28.2    
28.3    
28.3    
28.4    
28.5    
28.6    
28.6    
28.7    
28.8    
28.8    
28.9    
29.0    
29.1    
29.1    
29.2    
29.3    
29.4    
29.4    
29.5    
29.6    
29.7    
29.7    
29.8    
29.9    
30.0    
30.0    
30.1    
30.2    
30.3    
30.3    
30.4    
30.5    
30.6    
30.6    
30.7    
30.8    
30.9    
30.9    
31.0    
31.1    
31.2    
31.2    
31.3    
31.4    
31.5    
31.5    
31.6    
31.7    
31.8    
31.8    
31.9    
32.0    
32.1    
32.1    
32.2    
32.3    
32.4    
32.4    
32.5    
32.6    
32.7    
32.7    
32.8    
32.9    
33.0    
33.0    
33.1    
33.2    
33.3    
33.3    
33.4    
33.5    
33.6    
33.6    
33.7    
33.8    
33.9    
33.9    
34.0    
34.1    
34.2    
34.2    
34.3    
34.4    
34.5    
34.5    
34.6    
34.7    
34.8    
34.8    
34.9    
35.0    
35.1    
35.1    
35.2    
35.3    
35.4    
35.4    
35.5    
35.6    
35.7    
35.7    
35.8    
35.9    
35.9    
36.0    
36.1    
36.2    
36.2    
36.3    
36.4    
36.5    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.1    
37.1    
37.2    
37.3    
37.4    
37.4    
37.5    
37.6    
37.7    
37.7    
37.8    
37.9    
38.0    
38.0    
38.1    
38.2    
38.3    
38.3    
38.4    
38.5    
38.6    
38.6    
38.7    
38.8    
38.9    
38.9    
39.0    
39.1    
39.2    
39.2    
39.3    
39.4    
39.5    
39.5    
39.6    
39.7    
39.8    
39.8    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.4    
40.5    
40.6    
40.7    
40.7    
40.8    
40.9    
41.0    
41.0    
41.1    
41.2    
41.3    
41.3    
41.4    
41.5    
41.6    
41.6    
41.7    
41.8    
41.9    
41.9    
42.0    
42.1    
42.2    
42.2    
42.3    
42.4    
42.5    
42.5    
42.6    
42.7    
42.8    
42.8    
42.9    
43.0    
43.0    
43.1    
43.2    
43.3    
43.3    
43.4    
43.5    
43.6    
43.6    
43.7    
43.8    
43.9    
43.9    
44.0    
44.1    
44.2    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.8    
44.9    
45.0    
45.1    
45.1    
45.2    
45.3    
45.4    
45.4    
45.5    
45.6    
45.7    
45.7    
45.8    
45.9    
46.0    
46.0    
46.1    
46.2    
46.3    
46.3    
46.4    
46.5    
46.6    
46.6    
46.7    
46.8    
46.9    
46.9    
47.0    
47.1    
47.2    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.8    
47.8    
47.9    
48.0    
48.1    
48.1    
48.2    
48.3    
48.4    
48.4    
48.5    
48.6    
48.7    
48.7    
48.8    
48.9    
49.0    
49.0    
49.1    
49.2    
49.3    
49.3    
49.4    
49.5    
49.6    
49.6    
49.7    
49.8    
49.9    
49.9    
50.0    
50.1    
50.1    
50.2    
50.3    
50.4    
50.4    
50.5    
50.6    
50.7    
50.7    
50.8    
50.9    
51.0    
51.0    
51.1    
51.2    
51.3    
51.3    
51.4    
51.5    
51.6    
51.6    
51.7    
51.8    
51.9    
51.9    
52.0    
52.1    
52.2    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.8    
52.9    
53.0    
53.1    
53.1    
53.2    
53.3    
53.4    
53.4    
53.5    
53.6    
53.7    
53.7    
53.8    
53.9    
54.0    
54.0    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.6    
54.7    
54.8    
54.9    
54.9    
55.0    
55.1    
55.2    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.8    
55.9    
56.0    
56.1    
56.1    
56.2    
56.3    
56.4    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.0    
57.1    
57.2    
57.2    
57.3    
57.4    
57.5    
57.5    
57.6    
57.7    
57.8    
57.8    
57.9    
58.0    
58.1    
58.1    
58.2    
58.3    
58.4    
58.4    
58.5    
58.6    
58.7    
58.7    
58.8    
58.9    
59.0    
59.0    
59.1    
59.2    
59.3    
59.3    
59.4    
59.5    
59.6    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.5    
60.5    
60.6    
60.7    
60.8    
60.8    
60.9    
61.0    
61.1    
61.1    
61.2    
61.3    
61.4    
61.4    
61.5    
61.6    
61.7    
61.7    
61.8    
61.9    
62.0    
62.0    
62.1    
62.2    
62.3    
62.3    
62.4    
62.5    
62.6    
62.6    
62.7    
62.8    
62.9    
62.9    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.5    
63.6    
63.7    
63.8    
63.8    
63.9    
64.0    
64.1    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.6    
64.7    
64.8    
64.9    
64.9    
65.0    
65.1    
65.2    
65.2    
65.3    
65.4    
65.5    
65.5    
65.6    
65.7    
65.8    
65.8    
65.9    
66.0    
66.1    
66.1    
66.2    
66.3    
66.4    
66.4    
66.5    
66.6    
66.7    
66.7    
66.8    
66.9    
67.0    
67.0    
67.1    
67.2    
67.3    
67.3    
67.4    
67.5    
67.6    
67.6    
67.7    
67.8    
67.9    
67.9    
68.0    
68.1    
68.2    
68.2    
68.3    
68.4    
68.5    
68.5    
68.6    
68.7    
68.8    
68.8    
68.9    
69.0    
69.1    
69.1    
69.2    
69.3    
69.4    
69.4    
69.5    
69.6    
69.7    
69.7    
69.8    
69.9    
70.0    
70.0    
70.1    
70.2    
70.3    
70.3    
70.4    
70.5    
70.6    
70.6    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.2    
71.3    
71.4    
71.4    
71.5    
71.6    
71.7    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.3    
72.3    
72.4    
72.5    
72.6    
72.6    
72.7    
72.8    
72.9    
72.9    
73.0    
73.1    
73.2    
73.2    
73.3    
73.4    
73.5    
73.5    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.1    
74.2    
74.3    
74.4    
74.4    
74.5    
74.6    
74.7    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.3    
75.4    
75.5    
75.6    
75.6    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.2    
76.3    
76.4    
76.5    
76.5    
76.6    
76.7    
76.8    
76.8    
76.9    
77.0    
77.1    
77.1    
77.2    
77.3    
77.4    
77.4    
77.5    
77.6    
77.7    
77.7    
77.8    
77.9    
78.0    
78.0    
78.1    
78.2    
78.3    
78.3    
78.4    
78.5    
78.6    
78.6    
78.7    
78.8    
78.8    
78.9    
79.0    
79.1    
79.1    
79.2    
79.3    
79.4    
79.4    
79.5    
79.6    
79.7    
79.7    
79.8    
79.9    
80.0    
80.0    
80.1    
80.2    
80.3    
80.3    
80.4    
80.5    
80.6    
80.6    
80.7    
80.8    
80.9    
80.9    
81.0    
81.1    
81.2    
81.2    
81.3    
81.4    
81.5    
81.5    
81.6    
81.7    
81.8    
81.8    
81.9    
82.0    
82.1    
82.1    
82.2    
82.3    
82.4    
82.4    
82.5    
82.6    
82.7    
82.7    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.3    
83.3    
83.4    
83.5    
83.6    
83.6    
83.7    
83.8    
83.9    
83.9    
84.0    
84.1    
84.2    
84.2    
84.3    
84.4    
84.5    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.1    
85.2    
85.3    
85.4    
85.4    
85.5    
85.6    
85.7    
85.7    
85.8    
85.9    
85.9    
86.0    
86.1    
86.2    
86.2    
86.3    
86.4    
86.5    
86.5    
86.6    
86.7    
86.8    
86.8    
86.9    
87.0    
87.1    
87.1    
87.2    
87.3    
87.4    
87.4    
87.5    
87.6    
87.7    
87.7    
87.8    
87.9    
88.0    
88.0    
88.1    
88.2    
88.3    
88.3    
88.4    
88.5    
88.6    
88.6    
88.7    
88.8    
88.9    
88.9    
89.0    
89.1    
89.2    
89.2    
89.3    
89.4    
89.5    
89.5    
89.6    
89.7    
89.8    
89.8    
89.9    
90.0    
90.1    
90.1    
90.2    
90.3    
90.4    
90.4    
90.5    
90.6    
90.7    
90.7    
90.8    
90.9    
91.0    
91.0    
91.1    
91.2    
91.3    
91.3    
91.4    
91.5    
91.6    
91.6    
91.7    
91.8    
91.9    
91.9    
92.0    
92.1    
92.2    
92.2    
92.3    
92.4    
92.5    
92.5    
92.6    
92.7    
92.8    
92.8    
92.9    
93.0    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.6    
93.7    
93.8    
93.9    
93.9    
94.0    
94.1    
94.2    
94.2    
94.3    
94.4    
94.5    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.1    
95.2    
95.3    
95.4    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
96.0    
96.0    
96.1    
96.2    
96.3    
96.3    
96.4    
96.5    
96.6    
96.6    
96.7    
96.8    
96.9    
96.9    
97.0    
97.1    
97.2    
97.2    
97.3    
97.4    
97.5    
97.5    
97.6    
97.7    
97.8    
97.8    
97.9    
98.0    
98.1    
98.1    
98.2    
98.3    
98.4    
98.4    
98.5    
98.6    
98.7    
98.7    
98.8    
98.9    
99.0    
99.0    
99.1    
99.2    
99.3    
99.3    
99.4    
99.5    
99.6    
99.6    
99.7    
99.8    
99.9    
99.9    
-found 63 predictions from path traversal
Error with prediction: snap lend_intergenic: 31272, rend_intergenic: 24663  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38009, rend_intergenic: 31416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41489, rend_intergenic: 39728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46392, rend_intergenic: 41654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50522, rend_intergenic: 47426  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80950, rend_intergenic: 74587  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105272, rend_intergenic: 81937  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161598, rend_intergenic: 106825  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165487, rend_intergenic: 161846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175655, rend_intergenic: 165722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181940, rend_intergenic: 178994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187104, rend_intergenic: 183300  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206417, rend_intergenic: 187254  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215630, rend_intergenic: 206515  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218818, rend_intergenic: 215646  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219950, rend_intergenic: 219135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236874, rend_intergenic: 220898  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 241310, rend_intergenic: 238007  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 257695, rend_intergenic: 243867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266124, rend_intergenic: 263581  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 280235, rend_intergenic: 267780  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 288381, rend_intergenic: 283599  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support