-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_9103652-9373904

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.1762_t
Valid prediction for GlimmerHMM_glimmerT_1332-T1
Valid prediction for GlimmerHMM_glimmerT_1347-T1
Valid prediction for snap_scaffold_1-snap.1652-T1
Valid prediction for Augustus_model.g943.t1
Valid prediction for HiQ_model.g959.t1
Valid prediction for GeneMark_model.1770_t
Valid prediction for GeneMark_model.1751_t
Valid prediction for CodingQuarry_transcript_2722-T1
Valid prediction for Augustus_model.g941.t1
Valid prediction for GeneMark_model.1758_t
Valid prediction for snap_scaffold_1-snap.1667-T1
Valid prediction for snap_scaffold_1-snap.1693-T1
Valid prediction for snap_scaffold_1-snap.1692-T1
Valid prediction for GlimmerHMM_glimmerT_1345-T1
Valid prediction for pasa_asmbl_1961.p1
Valid prediction for GlimmerHMM_glimmerT_1349-T1
Valid prediction for GeneMark_model.1759_t
Valid prediction for GlimmerHMM_glimmerT_1333-T1
Valid prediction for HiQ_model.g954.t1
Valid prediction for HiQ_model.g957.t1
Valid prediction for snap_scaffold_1-snap.1694-T1
Valid prediction for CodingQuarry_transcript_2719-T1
Valid prediction for GeneMark_model.1739_t
Valid prediction for pasa_asmbl_1959.p1
Valid prediction for Augustus_model.g965.t1
Valid prediction for snap_scaffold_1-snap.1675-T1
Valid prediction for snap_scaffold_1-snap.1668-T1
Valid prediction for GlimmerHMM_glimmerT_1326-T1
Valid prediction for snap_scaffold_1-snap.1664-T1
Valid prediction for GlimmerHMM_glimmerT_1339-T1
Valid prediction for snap_scaffold_1-snap.1650-T1
Valid prediction for snap_scaffold_1-snap.1651-T1
Valid prediction for GlimmerHMM_glimmerT_1322-T1
Valid prediction for snap_scaffold_1-snap.1655-T1
Valid prediction for Augustus_model.g939.t1
Valid prediction for Augustus_model.g970.t1
Couldn't classify 50919, 51050
Sorry, prediction pasa_asmbl_1952.p1 fails validation.
(GTA)	 AA	50919-51050	GT	AGG
(CTT)	 AG	52210-52338	GT	AGG
(GAA)	 AG	52448-52564	GT	ATG
(CTG)	 AG	52716-52773	GT	AAG
(TGA)	 AG	52874-52929	GT	GTG
(ACG)	 AG	53167-53295	GT	AGG
(GAG)	 AG	53461-53662	GT	AGG
(TGA)	 AG	53807-53995	GT	AGG
(AGT)	 AG	54145-54287	GT	AGG
(GTG)	 AG	54373-54504	GT	CAG
(GAA)	 AG	54618-54676	GT	GAG
(GAA)	 AG	54760-54945	GT	AGG
(GTT)	 AG	55162-55252	GT	AGG
(CAC)	 AG	55479-55619	GT	AGG
(TTC)	 AG	55740-55851	GT	AGG
(TGG)	 AG	56034-56146	GT	AGG
(GAG)	 AG	56333-56539	GT	ACG
(AGC)	 AG	56720-56857	CT	AAC
add_exon() Sorry, pasa_asmbl_1952.p1 54618-54676-terminal-2 is invalid.
-recovered pasa_asmbl_1952.p1, terminal, 54618, 54676
-recovered pasa_asmbl_1952.p1, terminal, 56720, 56857
-recovered pasa_asmbl_1952.p1, internal, 52210, 52338
-recovered pasa_asmbl_1952.p1, internal, 52448, 52564
-recovered pasa_asmbl_1952.p1, internal, 52716, 52773
-recovered pasa_asmbl_1952.p1, internal, 52874, 52929
-recovered pasa_asmbl_1952.p1, internal, 53167, 53295
-recovered pasa_asmbl_1952.p1, internal, 53461, 53662
-recovered pasa_asmbl_1952.p1, internal, 53807, 53995
-recovered pasa_asmbl_1952.p1, internal, 54145, 54287
-recovered pasa_asmbl_1952.p1, internal, 54373, 54504
-recovered pasa_asmbl_1952.p1, internal, 54618, 54676
-recovered pasa_asmbl_1952.p1, internal, 54760, 54945
-recovered pasa_asmbl_1952.p1, internal, 55162, 55252
-recovered pasa_asmbl_1952.p1, internal, 55479, 55619
-recovered pasa_asmbl_1952.p1, internal, 55740, 55851
-recovered pasa_asmbl_1952.p1, internal, 56034, 56146
-recovered pasa_asmbl_1952.p1, internal, 56333, 56539
Valid prediction for snap_scaffold_1-snap.1677-T1
Valid prediction for pasa_asmbl_1951.p1
Valid prediction for GeneMark_model.1748_t
Valid prediction for GeneMark_model.1771_t
Valid prediction for snap_scaffold_1-snap.1656-T1
Valid prediction for snap_scaffold_1-snap.1683-T1
Valid prediction for GeneMark_model.1740_t
Valid prediction for snap_scaffold_1-snap.1678-T1
Valid prediction for GlimmerHMM_glimmerT_1353-T1
Valid prediction for CodingQuarry_transcript_2718-T1
Valid prediction for GeneMark_model.1742_t
Valid prediction for snap_scaffold_1-snap.1695-T1
Valid prediction for GlimmerHMM_glimmerT_1325-T1
Valid prediction for Augustus_model.g949.t1
Valid prediction for pasa_asmbl_1950.p1
Valid prediction for CodingQuarry_transcript_2723-T1
Valid prediction for GeneMark_model.1764_t
Valid prediction for snap_scaffold_1-snap.1645-T1
Valid prediction for snap_scaffold_1-snap.1649-T1
Valid prediction for GlimmerHMM_glimmerT_1354-T1
Valid prediction for snap_scaffold_1-snap.1662-T1
Valid prediction for GeneMark_model.1755_t
Valid prediction for GeneMark_model.1768_t
Valid prediction for GeneMark_model.1745_t
Valid prediction for snap_scaffold_1-snap.1684-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for Augustus_model.g966.t1
Valid prediction for pasa_asmbl_1953.p1
Valid prediction for CodingQuarry_transcript_2729-T1
Valid prediction for pasa_asmbl_1956.p1
Valid prediction for pasa_asmbl_1970.p1
Valid prediction for CodingQuarry_transcript_2720-T1
Valid prediction for snap_scaffold_1-snap.1688-T1
Valid prediction for GlimmerHMM_glimmerT_1340-T1
Valid prediction for GeneMark_model.1750_t
Valid prediction for snap_scaffold_1-snap.1647-T1
Valid prediction for GlimmerHMM_glimmerT_1350-T1
Valid prediction for HiQ_model.g961.t1
Valid prediction for CodingQuarry_transcript_2728-T1
Valid prediction for CodingQuarry_transcript_2716-T1
Couldn't classify 2021, 3301
Sorry, prediction pasa_asmbl_1947.p1 fails validation.
(AAG)	 GC	2021-3301	GT	AGG
(GTG)	 AG	5155-5824	GT	GGG
(TTA)	 AG	6012-6104	GT	GGG
(GCC)	 AG	8115-8188	GT	AGG
(GGT)	 AG	8383-8582	GT	AGG
(GGT)	 AG	9299-9390	GT	TGG
(CCT)	 AG	9489-9658	GT	AGG
(GTG)	 AG	9773-9967	GA	AAG
-recovered pasa_asmbl_1947.p1, terminal, 9773, 9967
-recovered pasa_asmbl_1947.p1, internal, 5155, 5824
-recovered pasa_asmbl_1947.p1, internal, 6012, 6104
-recovered pasa_asmbl_1947.p1, internal, 8115, 8188
-recovered pasa_asmbl_1947.p1, internal, 8383, 8582
-recovered pasa_asmbl_1947.p1, internal, 9299, 9390
-recovered pasa_asmbl_1947.p1, internal, 9489, 9658
Valid prediction for GlimmerHMM_glimmerT_1338-T1
Valid prediction for GlimmerHMM_glimmerT_1324-T1
Valid prediction for GeneMark_model.1741_t
Valid prediction for snap_scaffold_1-snap.1685-T1
Valid prediction for HiQ_model.g955.t1
Valid prediction for GeneMark_model.1765_t
Valid prediction for HiQ_model.g940.t1
Valid prediction for GlimmerHMM_glimmerT_1346-T1
Valid prediction for snap_scaffold_1-snap.1670-T1
Couldn't classify 207686, 207823
Sorry, prediction pasa_asmbl_1973.p1 fails validation.
(CCT)	 CC	207686-207823	GT	AGG
(AGC)	 AG	208196-208321	GT	AGG
(GAA)	 AG	208497-208661	GT	TGG
(TTG)	 AG	209029-209190	GT	CAG
(GCA)	 AG	209314-209382	GT	AGG
(GTT)	 AG	209468-209548	GT	AAG
(GCA)	 AG	209854-209997	GT	TGG
(ATA)	 AG	210401-210874	TG	AGT
-recovered pasa_asmbl_1973.p1, terminal, 210401, 210874
-recovered pasa_asmbl_1973.p1, internal, 208196, 208321
-recovered pasa_asmbl_1973.p1, internal, 208497, 208661
-recovered pasa_asmbl_1973.p1, internal, 209029, 209190
-recovered pasa_asmbl_1973.p1, internal, 209314, 209382
-recovered pasa_asmbl_1973.p1, internal, 209468, 209548
-recovered pasa_asmbl_1973.p1, internal, 209854, 209997
Valid prediction for GlimmerHMM_glimmerT_1343-T1
Valid prediction for GlimmerHMM_glimmerT_1348-T1
Valid prediction for snap_scaffold_1-snap.1679-T1
Valid prediction for GeneMark_model.1753_t
Valid prediction for GeneMark_model.1744_t
Valid prediction for HiQ_model.g950.t1
Valid prediction for snap_scaffold_1-snap.1681-T1
Valid prediction for GlimmerHMM_glimmerT_1335-T1
Couldn't classify 191162, 191180
Sorry, prediction pasa_asmbl_1966.p1 fails validation.
(CAT)	 GA	191162-191180	GT	CAG
(AAC)	 AG	191290-191333	GT	AGG
(CCT)	 AG	191621-191725	GT	GGG
(CTT)	 AG	191820-191936	GT	GGG
(GAA)	 AG	192024-192107	GC	AGG
(GTG)	 AG	192272-192407	GT	TGG
(ATC)	 AG	192553-192656	GT	TGG
(AAA)	 AG	192829-192973	GT	TGG
(GCT)	 AG	193059-193146	GT	AAG
(GTG)	 AG	193229-193406	GT	AGG
(ATC)	 AG	193480-193622	GT	GGG
(GGG)	 AG	193717-193853	GT	AGG
(AGT)	 AG	193926-194092	GT	AGG
(TTT)	 AG	194188-194362	GT	GGG
(ACA)	 AG	194467-194534	AA	GAA
add_exon() Sorry, pasa_asmbl_1966.p1 193059-193146-terminal-3 is invalid.
-recovered pasa_asmbl_1966.p1, terminal, 193059, 193146
-recovered pasa_asmbl_1966.p1, terminal, 194467, 194534
-recovered pasa_asmbl_1966.p1, internal, 191290, 191333
-recovered pasa_asmbl_1966.p1, internal, 191621, 191725
-recovered pasa_asmbl_1966.p1, internal, 191820, 191936
-recovered pasa_asmbl_1966.p1, internal, 192024, 192107
-recovered pasa_asmbl_1966.p1, internal, 192272, 192407
-recovered pasa_asmbl_1966.p1, internal, 192553, 192656
-recovered pasa_asmbl_1966.p1, internal, 192829, 192973
-recovered pasa_asmbl_1966.p1, internal, 193059, 193146
-recovered pasa_asmbl_1966.p1, internal, 193229, 193406
-recovered pasa_asmbl_1966.p1, internal, 193480, 193622
-recovered pasa_asmbl_1966.p1, internal, 193717, 193853
-recovered pasa_asmbl_1966.p1, internal, 193926, 194092
-recovered pasa_asmbl_1966.p1, internal, 194188, 194362
Valid prediction for snap_scaffold_1-snap.1673-T1
Valid prediction for HiQ_model.g963.t1
Valid prediction for GeneMark_model.1757_t
Valid prediction for HiQ_model.g948.t1
Valid prediction for CodingQuarry_transcript_2727-T1
Valid prediction for snap_scaffold_1-snap.1680-T1
Valid prediction for GeneMark_model.1769_t
Valid prediction for HiQ_model.g942.t1
Valid prediction for HiQ_model.g967.t1
Valid prediction for Augustus_model.g971.t1
Valid prediction for GeneMark_model.1761_t
Valid prediction for pasa_asmbl_1975.p1
Valid prediction for GlimmerHMM_glimmerT_1327-T1
Valid prediction for snap_scaffold_1-snap.1646-T1
Valid prediction for HiQ_model.g960.t1
Valid prediction for snap_scaffold_1-snap.1672-T1
Valid prediction for Augustus_model.g968.t1
Valid prediction for HiQ_model.g964.t1
Valid prediction for GeneMark_model.1767_t
Valid prediction for CodingQuarry_transcript_2725-T1
Valid prediction for snap_scaffold_1-snap.1687-T1
Valid prediction for Augustus_model.g952.t1
Valid prediction for snap_scaffold_1-snap.1660-T1
Valid prediction for snap_scaffold_1-snap.1682-T1
Valid prediction for snap_scaffold_1-snap.1689-T1
Valid prediction for GeneMark_model.1763_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 202132, 202170
Couldn't classify 202940, 203017
Sorry, prediction pasa_asmbl_525.p1 fails validation.
(TAC)	 AG	202132-202170	GT	TGG
(GTC)	 AG	202279-202411	GT	AGG
(CAG)	 AG	202501-202574	GT	AGG
(GAG)	 AG	202940-203017	AA	CCA
-recovered pasa_asmbl_525.p1, internal, 202132, 202170
-recovered pasa_asmbl_525.p1, internal, 202279, 202411
-recovered pasa_asmbl_525.p1, internal, 202501, 202574
Valid prediction for pasa_asmbl_532.p1
Valid prediction for snap_scaffold_1-snap.1691-T1
Valid prediction for snap_scaffold_1-snap.1663-T1
Valid prediction for GlimmerHMM_glimmerT_1328-T1
Valid prediction for GeneMark_model.1760_t
Valid prediction for Augustus_model.g944.t1
Valid prediction for snap_scaffold_1-snap.1658-T1
Valid prediction for Augustus_model.g962.t1
Valid prediction for snap_scaffold_1-snap.1657-T1
Valid prediction for snap_scaffold_1-snap.1671-T1
Valid prediction for snap_scaffold_1-snap.1676-T1
Valid prediction for CodingQuarry_transcript_2721-T1
Valid prediction for GlimmerHMM_glimmerT_1330-T1
Valid prediction for GeneMark_model.1766_t
Valid prediction for Augustus_model.g956.t1
Valid prediction for GlimmerHMM_glimmerT_1337-T1
Valid prediction for GeneMark_model.1756_t
Valid prediction for HiQ_model.g945.t1
Valid prediction for CodingQuarry_transcript_2726-T1
Valid prediction for GeneMark_model.1743_t
Valid prediction for Augustus_model.g969.t1
Valid prediction for GeneMark_model.1749_t
Valid prediction for snap_scaffold_1-snap.1666-T1
Valid prediction for Augustus_model.g946.t1
Valid prediction for GlimmerHMM_glimmerT_1323-T1
Valid prediction for Augustus_model.g958.t1
Valid prediction for GeneMark_model.1746_t
Valid prediction for snap_scaffold_1-snap.1654-T1
Valid prediction for GlimmerHMM_glimmerT_1336-T1
Valid prediction for GlimmerHMM_glimmerT_1352-T1
Valid prediction for pasa_asmbl_521.p1
Couldn't classify 114911, 114973
Sorry, prediction pasa_asmbl_535.p1 fails validation.
(AGA)	 GG	114911-114973	GT	ACG
(GTT)	 AG	115109-115396	TA	GAT
-recovered pasa_asmbl_535.p1, terminal, 115109, 115396
Valid prediction for GlimmerHMM_glimmerT_1341-T1
Valid prediction for snap_scaffold_1-snap.1648-T1
Valid prediction for GlimmerHMM_glimmerT_1331-T1
Valid prediction for pasa_asmbl_531.p1
Valid prediction for GlimmerHMM_glimmerT_1351-T1
Couldn't classify 99710, 99857
Couldn't classify 100332, 100349
Sorry, prediction pasa_asmbl_1333.p1 fails validation.
(CTG)	 AC	99710-99857	GT	CGG
(CCA)	 AG	100071-100219	GT	CGG
(CCA)	 AG	100332-100349	CA	CCC
-recovered pasa_asmbl_1333.p1, internal, 100071, 100219
Valid prediction for pasa_asmbl_536.p1
Couldn't classify 199763, 199781
Sorry, prediction pasa_asmbl_528.p1 fails validation.
(ATG)	 CT	197524-197620	GT	TGG
(GTA)	 AG	197800-197903	GT	AGG
(ACC)	 AG	198124-198267	GT	ATG
(ACG)	 AG	198453-198609	GT	TAG
(ACC)	 AG	198784-198811	GT	ACG
(AAT)	 AG	199763-199781	GG	GGG
-recovered pasa_asmbl_528.p1, initial, 197524, 197620
-recovered pasa_asmbl_528.p1, internal, 197800, 197903
-recovered pasa_asmbl_528.p1, internal, 198124, 198267
-recovered pasa_asmbl_528.p1, internal, 198453, 198609
-recovered pasa_asmbl_528.p1, internal, 198784, 198811
Valid prediction for GlimmerHMM_glimmerT_1342-T1
Valid prediction for GeneMark_model.1752_t
Valid prediction for CodingQuarry_transcript_2717-T1
Valid prediction for GlimmerHMM_glimmerT_1344-T1
Valid prediction for HiQ_model.g947.t1
Valid prediction for snap_scaffold_1-snap.1661-T1
Valid prediction for snap_scaffold_1-snap.1690-T1
Valid prediction for GeneMark_model.1754_t
Valid prediction for snap_scaffold_1-snap.1659-T1
Couldn't classify 103725, 103826
Sorry, prediction pasa_asmbl_1315.p1 fails validation.
(ATG)	 CC	101660-101693	GT	AGG
(GTG)	 AG	101856-101992	GT	AGG
(GTG)	 AG	102137-102275	GT	CGG
(GTG)	 AG	102387-102607	GT	AGG
(TCT)	 AG	102698-103265	GT	AGG
(CCC)	 AG	103412-103599	GT	CTG
(TCC)	 AG	103725-103826	TC	ACT
-recovered pasa_asmbl_1315.p1, initial, 101660, 101693
-recovered pasa_asmbl_1315.p1, internal, 101856, 101992
-recovered pasa_asmbl_1315.p1, internal, 102137, 102275
-recovered pasa_asmbl_1315.p1, internal, 102387, 102607
-recovered pasa_asmbl_1315.p1, internal, 102698, 103265
-recovered pasa_asmbl_1315.p1, internal, 103412, 103599
Valid prediction for snap_scaffold_1-snap.1669-T1
Valid prediction for Augustus_model.g953.t1
Valid prediction for GlimmerHMM_glimmerT_1334-T1
Valid prediction for Augustus_model.g951.t1
Valid prediction for GlimmerHMM_glimmerT_1329-T1
Valid prediction for snap_scaffold_1-snap.1686-T1
Valid prediction for snap_scaffold_1-snap.1665-T1
Valid prediction for snap_scaffold_1-snap.1653-T1
Valid prediction for snap_scaffold_1-snap.1674-T1
Valid prediction for GeneMark_model.1747_t
Couldn't classify 201991, 202170
Sorry, prediction pasa_asmbl_527.p1 fails validation.
(ATG)	 AC	200499-200600	GT	ATG
(CAT)	 AG	200702-200840	GT	AAG
(GTG)	 AG	200925-201043	GT	AGG
(GTT)	 AG	201388-201537	GT	ATG
(CTG)	 AG	201651-201821	GT	AAG
(CCT)	 AG	201991-202170	GT	TGG
-recovered pasa_asmbl_527.p1, initial, 200499, 200600
-recovered pasa_asmbl_527.p1, internal, 200702, 200840
-recovered pasa_asmbl_527.p1, internal, 200925, 201043
-recovered pasa_asmbl_527.p1, internal, 201388, 201537
-recovered pasa_asmbl_527.p1, internal, 201651, 201821
-recovered pasa_asmbl_527.p1, internal, 201991, 202170

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 19813, rend_intergenic: 14610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45516, rend_intergenic: 31225  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82078, rend_intergenic: 79437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 270253
-exon list size: 726


building trellis

0.1    
0.3    
0.4    
0.5    
0.7    
0.8    
1.0    
1.1    
1.2    
1.4    
1.5    
1.6    
1.8    
1.9    
2.1    
2.2    
2.3    
2.5    
2.6    
2.7    
2.9    
3.0    
3.2    
3.3    
3.4    
3.6    
3.7    
3.8    
4.0    
4.1    
4.3    
4.4    
4.5    
4.7    
4.8    
4.9    
5.1    
5.2    
5.4    
5.5    
5.6    
5.8    
5.9    
6.0    
6.2    
6.3    
6.5    
6.6    
6.7    
6.9    
7.0    
7.1    
7.3    
7.4    
7.6    
7.7    
7.8    
8.0    
8.1    
8.2    
8.4    
8.5    
8.7    
8.8    
8.9    
9.1    
9.2    
9.3    
9.5    
9.6    
9.8    
9.9    
10.0    
10.2    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.1    
11.3    
11.4    
11.5    
11.7    
11.8    
12.0    
12.1    
12.2    
12.4    
12.5    
12.6    
12.8    
12.9    
13.0    
13.2    
13.3    
13.5    
13.6    
13.7    
13.9    
14.0    
14.1    
14.3    
14.4    
14.6    
14.7    
14.8    
15.0    
15.1    
15.2    
15.4    
15.5    
15.7    
15.8    
15.9    
16.1    
16.2    
16.3    
16.5    
16.6    
16.8    
16.9    
17.0    
17.2    
17.3    
17.4    
17.6    
17.7    
17.9    
18.0    
18.1    
18.3    
18.4    
18.5    
18.7    
18.8    
19.0    
19.1    
19.2    
19.4    
19.5    
19.6    
19.8    
19.9    
20.1    
20.2    
20.3    
20.5    
20.6    
20.7    
20.9    
21.0    
21.2    
21.3    
21.4    
21.6    
21.7    
21.8    
22.0    
22.1    
22.3    
22.4    
22.5    
22.7    
22.8    
22.9    
23.1    
23.2    
23.4    
23.5    
23.6    
23.8    
23.9    
24.0    
24.2    
24.3    
24.5    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.5    
25.7    
25.8    
26.0    
26.1    
26.2    
26.4    
26.5    
26.6    
26.8    
26.9    
27.1    
27.2    
27.3    
27.5    
27.6    
27.7    
27.9    
28.0    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.1    
30.2    
30.4    
30.5    
30.6    
30.8    
30.9    
31.0    
31.2    
31.3    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.3    
32.4    
32.6    
32.7    
32.8    
33.0    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.5    
34.6    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.6    
35.7    
35.9    
36.0    
36.1    
36.3    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.2    
37.4    
37.5    
37.6    
37.8    
37.9    
38.0    
38.2    
38.3    
38.5    
38.6    
38.7    
38.9    
39.0    
39.1    
39.3    
39.4    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.4    
40.5    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.5    
41.6    
41.8    
41.9    
42.0    
42.2    
42.3    
42.4    
42.6    
42.7    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.7    
43.8    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
47.0    
47.1    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.2    
49.3    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.7    
50.8    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.9    
53.0    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.2    
56.3    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.5    
59.6    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
62.0    
62.1    
62.2    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.7    
68.8    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.2    
74.3    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.1    
80.2    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.8    
83.0    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.5    
84.6    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.8    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.6    
92.7    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.7    
93.8    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
97.0    
97.1    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.4    
98.5    
98.6    
98.8    
98.9    
99.0    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 35 predictions from path traversal
Error with prediction: snap lend_intergenic: 19813, rend_intergenic: 14610  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45516, rend_intergenic: 31225  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82078, rend_intergenic: 79437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 32 predictions persist after filtering for low support