-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_17586128-17785972 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1-snap.3241-T1 Valid prediction for GlimmerHMM_glimmerT_2431-T1 Valid prediction for snap_scaffold_1-snap.3232-T1 Valid prediction for GlimmerHMM_glimmerT_2439-T1 Valid prediction for GeneMark_model.3560_t Valid prediction for Augustus_model.g1753.t1 Valid prediction for snap_scaffold_1-snap.3256-T1 Valid prediction for GeneMark_model.3539_t Valid prediction for GeneMark_model.3566_t Valid prediction for HiQ_model.g1757.t1 Valid prediction for snap_scaffold_1-snap.3248-T1 Valid prediction for snap_scaffold_1-snap.3221-T1 Valid prediction for GeneMark_model.3564_t Valid prediction for snap_scaffold_1-snap.3231-T1 Valid prediction for snap_scaffold_1-snap.3216-T1 Valid prediction for GlimmerHMM_glimmerT_2432-T1 Valid prediction for snap_scaffold_1-snap.3209-T1 Valid prediction for snap_scaffold_1-snap.3212-T1 Valid prediction for Augustus_model.g1765.t1 Valid prediction for GlimmerHMM_glimmerT_2412-T1 Valid prediction for GlimmerHMM_glimmerT_2436-T1 Valid prediction for GeneMark_model.3528_t Valid prediction for pasa_asmbl_2509.p1 Valid prediction for snap_scaffold_1-snap.3234-T1 Valid prediction for snap_scaffold_1-snap.3223-T1 Valid prediction for GeneMark_model.3522_t Valid prediction for GeneMark_model.3537_t Valid prediction for GlimmerHMM_glimmerT_2426-T1 Valid prediction for GlimmerHMM_glimmerT_2423-T1 Valid prediction for snap_scaffold_1-snap.3218-T1 Valid prediction for GeneMark_model.3530_t Valid prediction for snap_scaffold_1-snap.3236-T1 Valid prediction for GeneMark_model.3550_t Valid prediction for GeneMark_model.3532_t Valid prediction for GeneMark_model.3520_t Valid prediction for GeneMark_model.3518_t Valid prediction for GeneMark_model.3546_t Valid prediction for Augustus_model.g1760.t1 Couldn't classify 141941, 142005 Sorry, prediction pasa_asmbl_2516.p1 fails validation. (GCT) GC 141941-142005 GT AGG (TCG) AG 142110-142163 GT AGG (GCA) AG 142443-142560 GT AAG (GTG) AG 142792-142950 GT TGG (GCG) AG 143073-143210 GT GGG (ATA) AG 143433-143498 GT CGG (TTT) AG 143601-143805 GT GGG (GTA) AG 143970-144056 GT AGG (CTG) AG 144213-144345 GT AAG (CGA) AG 144495-144600 GT AGG (GGC) AG 144709-144787 GT TGG (GCA) AG 144965-145068 TC GAT -recovered pasa_asmbl_2516.p1, terminal, 144965, 145068 -recovered pasa_asmbl_2516.p1, internal, 142110, 142163 -recovered pasa_asmbl_2516.p1, internal, 142443, 142560 -recovered pasa_asmbl_2516.p1, internal, 142792, 142950 -recovered pasa_asmbl_2516.p1, internal, 143073, 143210 -recovered pasa_asmbl_2516.p1, internal, 143433, 143498 -recovered pasa_asmbl_2516.p1, internal, 143601, 143805 -recovered pasa_asmbl_2516.p1, internal, 143970, 144056 -recovered pasa_asmbl_2516.p1, internal, 144213, 144345 -recovered pasa_asmbl_2516.p1, internal, 144495, 144600 -recovered pasa_asmbl_2516.p1, internal, 144709, 144787 Valid prediction for snap_scaffold_1-snap.3206-T1 Valid prediction for GlimmerHMM_glimmerT_2427-T1 Valid prediction for GeneMark_model.3534_t Valid prediction for GeneMark_model.3526_t Valid prediction for GeneMark_model.3562_t Valid prediction for GlimmerHMM_glimmerT_2417-T1 Valid prediction for snap_scaffold_1-snap.3244-T1 Valid prediction for Augustus_model.g1763.t1 Valid prediction for snap_scaffold_1-snap.3214-T1 Valid prediction for snap_scaffold_1-snap.3208-T1 Valid prediction for snap_scaffold_1-snap.3224-T1 Valid prediction for snap_scaffold_1-snap.3203-T1 Valid prediction for Augustus_model.g1761.t1 Valid prediction for GeneMark_model.3569_t Valid prediction for GeneMark_model.3544_t Valid prediction for GeneMark_model.3571_t Valid prediction for CodingQuarry_transcript_2969-T1 Valid prediction for GeneMark_model.3548_t Valid prediction for GlimmerHMM_glimmerT_2425-T1 Valid prediction for GeneMark_model.3558_t Valid prediction for snap_scaffold_1-snap.3239-T1 Valid prediction for GeneMark_model.3524_t Valid prediction for GeneMark_model.3573_t Valid prediction for Augustus_model.g1764.t1 Valid prediction for GlimmerHMM_glimmerT_2416-T1 Valid prediction for Augustus_model.g1762.t1 Valid prediction for GeneMark_model.3542_t Valid prediction for GlimmerHMM_glimmerT_2430-T1 Valid prediction for GlimmerHMM_glimmerT_2435-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for Augustus_model.g1759.t1 Valid prediction for GeneMark_model.3556_t Valid prediction for snap_scaffold_1-snap.3250-T1 Valid prediction for GlimmerHMM_glimmerT_2415-T1 Valid prediction for snap_scaffold_1-snap.3229-T1 Valid prediction for snap_scaffold_1-snap.3246-T1 Valid prediction for snap_scaffold_1-snap.3205-T1 Valid prediction for GlimmerHMM_glimmerT_2428-T1 Valid prediction for snap_scaffold_1-snap.3251-T1 Valid prediction for GlimmerHMM_glimmerT_2409-T1 Valid prediction for snap_scaffold_1-snap.3215-T1 Valid prediction for GeneMark_model.3552_t Valid prediction for GeneMark_model.3574_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for CodingQuarry_transcript_2966-T1 Valid prediction for snap_scaffold_1-snap.3249-T1 Valid prediction for HiQ_model.g1758.t1 Valid prediction for GlimmerHMM_glimmerT_2419-T1 Couldn't classify 105988, 106027 Sorry, prediction pasa_asmbl_1059.p1 fails validation. (GGT) TA 105988-106027 GT GGG (CGG) AG 106430-106574 GT AAG (GCT) AG 106918-107014 GT AGG (ATC) AG 107420-107618 GT CGG (GTA) AG 107969-108087 GT AGG (TTG) AG 108343-108516 GT AGG (GTC) AG 108969-109129 GT AAG (GGA) AG 109421-109532 GT CTG (CTC) AG 109667-109846 GT AGG (GCG) AG 109954-110052 GT AGG (GGC) AG 110322-110465 GT AGG (GGG) AG 110700-110780 GA GAG -recovered pasa_asmbl_1059.p1, terminal, 110700, 110780 -recovered pasa_asmbl_1059.p1, internal, 106430, 106574 -recovered pasa_asmbl_1059.p1, internal, 106918, 107014 -recovered pasa_asmbl_1059.p1, internal, 107420, 107618 -recovered pasa_asmbl_1059.p1, internal, 107969, 108087 -recovered pasa_asmbl_1059.p1, internal, 108343, 108516 -recovered pasa_asmbl_1059.p1, internal, 108969, 109129 -recovered pasa_asmbl_1059.p1, internal, 109421, 109532 -recovered pasa_asmbl_1059.p1, internal, 109667, 109846 -recovered pasa_asmbl_1059.p1, internal, 109954, 110052 -recovered pasa_asmbl_1059.p1, internal, 110322, 110465 Couldn't classify 165779, 165984 Couldn't classify 166344, 166524 Sorry, prediction pasa_asmbl_1048.p2 fails validation. (GGG) TA 165779-165984 GT AAG (CCT) AG 166344-166524 AG ACA Valid prediction for snap_scaffold_1-snap.3227-T1 Valid prediction for GlimmerHMM_glimmerT_2433-T1 Valid prediction for pasa_asmbl_1045.p1 Valid prediction for GeneMark_model.3561_t Valid prediction for HiQ_model.g1756.t1 Valid prediction for GeneMark_model.3519_t Valid prediction for Augustus_model.g1767.t1 Valid prediction for Augustus_model.g1751.t1 Valid prediction for snap_scaffold_1-snap.3235-T1 Valid prediction for GlimmerHMM_glimmerT_2422-T1 Valid prediction for snap_scaffold_1-snap.3225-T1 Valid prediction for GlimmerHMM_glimmerT_2421-T1 Valid prediction for snap_scaffold_1-snap.3233-T1 Valid prediction for snap_scaffold_1-snap.3219-T1 Valid prediction for CodingQuarry_transcript_2970-T1 Couldn't classify 170863, 171558 Sorry, prediction pasa_asmbl_1047.p1 fails validation. (CAG) TG 170863-171558 CC AGC Valid prediction for GeneMark_model.3553_t Valid prediction for GlimmerHMM_glimmerT_2434-T1 Valid prediction for GeneMark_model.3570_t Valid prediction for snap_scaffold_1-snap.3228-T1 Couldn't classify 135942, 136289 Sorry, prediction pasa_asmbl_1052.p1 fails validation. (GGG) TA 135942-136289 AA TCA Valid prediction for snap_scaffold_1-snap.3255-T1 Valid prediction for GeneMark_model.3568_t Valid prediction for GeneMark_model.3567_t Valid prediction for GeneMark_model.3521_t Valid prediction for GlimmerHMM_glimmerT_2437-T1 Valid prediction for GeneMark_model.3527_t Valid prediction for snap_scaffold_1-snap.3226-T1 Valid prediction for GeneMark_model.3545_t Valid prediction for snap_scaffold_1-snap.3210-T1 Valid prediction for GeneMark_model.3538_t Valid prediction for Augustus_model.g1752.t1 Valid prediction for Augustus_model.g1766.t1 Valid prediction for GlimmerHMM_glimmerT_2411-T1 Valid prediction for GlimmerHMM_glimmerT_2429-T1 Valid prediction for snap_scaffold_1-snap.3247-T1 Valid prediction for GeneMark_model.3555_t Couldn't classify 193937, 194152 Sorry, prediction pasa_asmbl_1043.p2 fails validation. (TTC) AG 193937-194152 GT AGG (CTG) AG 194345-194461 CC GAC -recovered pasa_asmbl_1043.p2, terminal, 194345, 194461 -recovered pasa_asmbl_1043.p2, internal, 193937, 194152 Valid prediction for snap_scaffold_1-snap.3243-T1 Valid prediction for GeneMark_model.3533_t Valid prediction for GeneMark_model.3531_t Valid prediction for snap_scaffold_1-snap.3202-T1 Valid prediction for GeneMark_model.3565_t Valid prediction for GeneMark_model.3543_t Valid prediction for snap_scaffold_1-snap.3252-T1 Valid prediction for GeneMark_model.3529_t Valid prediction for snap_scaffold_1-snap.3213-T1 Valid prediction for GeneMark_model.3557_t Valid prediction for snap_scaffold_1-snap.3242-T1 Valid prediction for snap_scaffold_1-snap.3211-T1 Valid prediction for GeneMark_model.3523_t Valid prediction for GlimmerHMM_glimmerT_2410-T1 Valid prediction for GeneMark_model.3541_t Valid prediction for GeneMark_model.3536_t Valid prediction for Augustus_model.g1768.t1 Valid prediction for GeneMark_model.3535_t Valid prediction for pasa_asmbl_1061.p1 Valid prediction for GeneMark_model.3517_t Valid prediction for GlimmerHMM_glimmerT_2438-T1 Valid prediction for GlimmerHMM_glimmerT_2418-T1 Valid prediction for GeneMark_model.3554_t Valid prediction for GeneMark_model.3540_t Valid prediction for snap_scaffold_1-snap.3253-T1 Valid prediction for GlimmerHMM_glimmerT_2414-T1 Couldn't classify 198725, 199045 Sorry, prediction pasa_asmbl_1042.p1 fails validation. (ATG) CG 198725-199045 TC GGT Valid prediction for snap_scaffold_1-snap.3204-T1 Valid prediction for Augustus_model.g1750.t1 Valid prediction for snap_scaffold_1-snap.3238-T1 Valid prediction for GeneMark_model.3547_t Valid prediction for snap_scaffold_1-snap.3217-T1 Valid prediction for snap_scaffold_1-snap.3237-T1 Valid prediction for GlimmerHMM_glimmerT_2420-T1 Valid prediction for snap_scaffold_1-snap.3207-T1 Valid prediction for snap_scaffold_1-snap.3222-T1 Valid prediction for snap_scaffold_1-snap.3254-T1 Valid prediction for GeneMark_model.3563_t Valid prediction for GlimmerHMM_glimmerT_2408-T1 Valid prediction for GeneMark_model.3525_t Couldn't classify 116270, 116602 Sorry, prediction pasa_asmbl_1055.p1 fails validation. (TGC) TT 116270-116602 CC AAC Valid prediction for GeneMark_model.3549_t Valid prediction for GlimmerHMM_glimmerT_2413-T1 Valid prediction for Augustus_model.g1748.t1 Valid prediction for GlimmerHMM_glimmerT_2424-T1 Valid prediction for Augustus_model.g1754.t1 Couldn't classify 190535, 190918 Sorry, prediction pasa_asmbl_1044.p1 fails validation. (ATG) AG 187346-187479 GT AGG (GAA) AG 188282-188537 GT TGG (GCC) AG 190535-190918 AC GCA -recovered pasa_asmbl_1044.p1, initial, 187346, 187479 -recovered pasa_asmbl_1044.p1, internal, 187346, 187479 -recovered pasa_asmbl_1044.p1, internal, 188282, 188537 Valid prediction for HiQ_model.g1749.t1 Couldn't classify 134039, 134082 Couldn't classify 135310, 135845 Sorry, prediction pasa_asmbl_1053.p1 fails validation. (AAG) GG 134039-134082 GT AGG (GTT) AG 134490-134668 GT AGG (AGC) AG 135043-135192 GT AGG (ACC) AG 135310-135845 CC GCC -recovered pasa_asmbl_1053.p1, internal, 134490, 134668 -recovered pasa_asmbl_1053.p1, internal, 135043, 135192 Valid prediction for Augustus_model.g1755.t1 Valid prediction for GeneMark_model.3551_t Valid prediction for snap_scaffold_1-snap.3240-T1 Valid prediction for snap_scaffold_1-snap.3245-T1 Couldn't classify 115969, 116049 Sorry, prediction pasa_asmbl_1056.p1 fails validation. (ATG) AA 112454-112511 GT TGG (ACG) AG 113471-113656 GT AGG (AGG) AG 114252-114332 GT AGG (GCA) AG 114865-115051 GT AGG (GGA) AG 115325-115426 GT CAG (GGC) AG 115709-115850 GT TGG (ATC) AG 115969-116049 CA CCC -recovered pasa_asmbl_1056.p1, initial, 112454, 112511 -recovered pasa_asmbl_1056.p1, internal, 113471, 113656 -recovered pasa_asmbl_1056.p1, internal, 114252, 114332 -recovered pasa_asmbl_1056.p1, internal, 114865, 115051 -recovered pasa_asmbl_1056.p1, internal, 115325, 115426 -recovered pasa_asmbl_1056.p1, internal, 115709, 115850 Valid prediction for snap_scaffold_1-snap.3220-T1 Valid prediction for snap_scaffold_1-snap.3230-T1 Valid prediction for GeneMark_model.3572_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7376, rend_intergenic: 5388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 10681, rend_intergenic: 7600 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16489, rend_intergenic: 12407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22546, rend_intergenic: 18763 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32137, rend_intergenic: 28288 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35509, rend_intergenic: 33668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35949, rend_intergenic: 35743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47528, rend_intergenic: 38530 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52223, rend_intergenic: 48008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62598, rend_intergenic: 55685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66829, rend_intergenic: 64601 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67299, rend_intergenic: 66858 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74123, rend_intergenic: 67657 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77371, rend_intergenic: 76650 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99643, rend_intergenic: 96137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115534, rend_intergenic: 112123 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123093, rend_intergenic: 117679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130905, rend_intergenic: 126169 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135684, rend_intergenic: 133804 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 137293, rend_intergenic: 135939 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144539, rend_intergenic: 141641 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155328, rend_intergenic: 153879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157513, rend_intergenic: 155746 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164735, rend_intergenic: 157615 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190777, rend_intergenic: 164786 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195823, rend_intergenic: 195173 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 199845 -exon list size: 880 building trellis 0.1 0.2 0.3 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.2 8.3 8.4 8.5 8.6 8.7 8.8 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.2 19.3 19.4 19.5 19.6 19.7 19.8 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.2 30.3 30.4 30.5 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.2 41.3 41.4 41.5 41.6 41.7 41.8 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.2 58.3 58.4 58.5 58.6 58.7 58.8 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.5 69.6 69.7 69.8 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.2 80.3 80.4 80.5 80.6 80.7 80.8 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.2 91.3 91.4 91.5 91.6 91.7 91.8 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.7 99.8 99.9 -found 37 predictions from path traversal Error with prediction: snap lend_intergenic: 7376, rend_intergenic: 5388 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 10681, rend_intergenic: 7600 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16489, rend_intergenic: 12407 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22546, rend_intergenic: 18763 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32137, rend_intergenic: 28288 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35509, rend_intergenic: 33668 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35949, rend_intergenic: 35743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47528, rend_intergenic: 38530 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52223, rend_intergenic: 48008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62598, rend_intergenic: 55685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 66829, rend_intergenic: 64601 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 67299, rend_intergenic: 66858 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74123, rend_intergenic: 67657 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77371, rend_intergenic: 76650 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99643, rend_intergenic: 96137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115534, rend_intergenic: 112123 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 123093, rend_intergenic: 117679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130905, rend_intergenic: 126169 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135684, rend_intergenic: 133804 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 137293, rend_intergenic: 135939 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144539, rend_intergenic: 141641 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155328, rend_intergenic: 153879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 157513, rend_intergenic: 155746 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 164735, rend_intergenic: 157615 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190777, rend_intergenic: 164786 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195823, rend_intergenic: 195173 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 24 predictions persist after filtering for low support -building DP trellis -building trellis in range 188955 - 199845 -exon list size: 29 building trellis 3.2 6.5 9.7 12.9 16.1 19.4 22.6 25.8 29.0 32.3 35.5 38.7 41.9 45.2 48.4 51.6 54.8 58.1 61.3 64.5 67.7 71.0 74.2 77.4 80.6 83.9 87.1 90.3 93.5 96.8 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support