-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_16903369-17126590

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1-snap.3044-T1
Valid prediction for GlimmerHMM_glimmerT_2323-T1
Valid prediction for GeneMark_model.3360_t
Valid prediction for GeneMark_model.3317_t
Valid prediction for GeneMark_model.3306_t
Valid prediction for Augustus_model.g1693.t1
Valid prediction for CodingQuarry_transcript_2964-T1
Valid prediction for Augustus_model.g1696.t1
Valid prediction for GeneMark_model.3343_t
Valid prediction for GlimmerHMM_glimmerT_2329-T1
Valid prediction for Augustus_model.g1695.t1
Valid prediction for snap_scaffold_1-snap.3053-T1
Valid prediction for GeneMark_model.3314_t
Valid prediction for GlimmerHMM_glimmerT_2325-T1
Valid prediction for GeneMark_model.3298_t
Valid prediction for GeneMark_model.3351_t
Valid prediction for snap_scaffold_1-snap.3055-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_1-snap.3070-T1
Valid prediction for GlimmerHMM_glimmerT_2322-T1
Valid prediction for GeneMark_model.3323_t
Valid prediction for GeneMark_model.3339_t
Valid prediction for GeneMark_model.3312_t
Valid prediction for snap_scaffold_1-snap.3062-T1
Valid prediction for GeneMark_model.3354_t
Valid prediction for GeneMark_model.3350_t
Valid prediction for snap_scaffold_1-snap.3041-T1
Valid prediction for GeneMark_model.3320_t
Valid prediction for GeneMark_model.3316_t
Valid prediction for GeneMark_model.3359_t
Valid prediction for Augustus_model.g1692.t1
Valid prediction for GeneMark_model.3341_t
Valid prediction for GeneMark_model.3322_t
Valid prediction for GeneMark_model.3335_t
Valid prediction for GeneMark_model.3334_t
Valid prediction for snap_scaffold_1-snap.3058-T1
Valid prediction for GeneMark_model.3349_t
Valid prediction for GeneMark_model.3324_t
Valid prediction for snap_scaffold_1-snap.3061-T1
Valid prediction for GeneMark_model.3309_t
Valid prediction for snap_scaffold_1-snap.3075-T1
Valid prediction for GeneMark_model.3304_t
Couldn't classify 146881, 147079
Sorry, prediction pasa_asmbl_2498.p1 fails validation.
(TTA)	 AC	146881-147079	GT	AGG
(TGT)	 AG	147573-147700	GT	TTG
(TGT)	 AG	148028-148169	GT	TGG
(ACA)	 AG	148446-148630	AG	AAA
-recovered pasa_asmbl_2498.p1, terminal, 148446, 148630
-recovered pasa_asmbl_2498.p1, internal, 147573, 147700
-recovered pasa_asmbl_2498.p1, internal, 148028, 148169
Valid prediction for snap_scaffold_1-snap.3049-T1
Valid prediction for GeneMark_model.3356_t
Valid prediction for GeneMark_model.3328_t
Valid prediction for GeneMark_model.3337_t
Valid prediction for Augustus_model.g1684.t1
Valid prediction for snap_scaffold_1-snap.3067-T1
Valid prediction for GlimmerHMM_glimmerT_2321-T1
Valid prediction for GlimmerHMM_glimmerT_2312-T1
Valid prediction for Augustus_model.g1689.t1
Valid prediction for snap_scaffold_1-snap.3064-T1
Valid prediction for GeneMark_model.3353_t
Valid prediction for Augustus_model.g1687.t1
Valid prediction for GlimmerHMM_glimmerT_2306-T1
Valid prediction for GeneMark_model.3300_t
Valid prediction for GeneMark_model.3345_t
Valid prediction for GlimmerHMM_glimmerT_2309-T1
Valid prediction for GeneMark_model.3347_t
Valid prediction for snap_scaffold_1-snap.3073-T1
Valid prediction for snap_scaffold_1-snap.3072-T1
Valid prediction for Augustus_model.g1702.t1
Valid prediction for snap_scaffold_1-snap.3051-T1
Valid prediction for GlimmerHMM_glimmerT_2317-T1
Valid prediction for GeneMark_model.3330_t
Valid prediction for GlimmerHMM_glimmerT_2320-T1
Valid prediction for GeneMark_model.3326_t
Valid prediction for snap_scaffold_1-snap.3038-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1-snap.3052-T1
Valid prediction for GeneMark_model.3346_t
Valid prediction for snap_scaffold_1-snap.3054-T1
Valid prediction for GlimmerHMM_glimmerT_2328-T1
Valid prediction for GeneMark_model.3333_t
Valid prediction for Augustus_model.g1700.t1
Valid prediction for snap_scaffold_1-snap.3060-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_2315-T1
Valid prediction for GeneMark_model.3329_t
Valid prediction for GlimmerHMM_glimmerT_2313-T1
Couldn't classify 57263, 57432
Couldn't classify 59523, 59760
Sorry, prediction pasa_asmbl_1027.p1 fails validation.
(CTG)	 AG	57263-57432	GT	TGG
(TTT)	 AG	59523-59760	AC	CCA
-recovered pasa_asmbl_1027.p1, internal, 57263, 57432
Valid prediction for snap_scaffold_1-snap.3068-T1
Valid prediction for GeneMark_model.3311_t
Valid prediction for GlimmerHMM_glimmerT_2319-T1
Valid prediction for GeneMark_model.3340_t
Valid prediction for GeneMark_model.3344_t
Valid prediction for GeneMark_model.3318_t
Valid prediction for snap_scaffold_1-snap.3074-T1
Valid prediction for snap_scaffold_1-snap.3065-T1
Valid prediction for snap_scaffold_1-snap.3050-T1
Valid prediction for snap_scaffold_1-snap.3059-T1
Valid prediction for GeneMark_model.3321_t
Valid prediction for GlimmerHMM_glimmerT_2324-T1
Valid prediction for GeneMark_model.3301_t
Valid prediction for GlimmerHMM_glimmerT_2330-T1
Valid prediction for snap_scaffold_1-snap.3040-T1
Valid prediction for GlimmerHMM_glimmerT_2308-T1
Valid prediction for GeneMark_model.3313_t
Valid prediction for GlimmerHMM_glimmerT_2327-T1
Valid prediction for snap_scaffold_1-snap.3037-T1
Valid prediction for GeneMark_model.3338_t
Valid prediction for snap_scaffold_1-snap.3047-T1
Valid prediction for GeneMark_model.3357_t
Valid prediction for GeneMark_model.3319_t
Valid prediction for GlimmerHMM_glimmerT_2311-T1
Valid prediction for GeneMark_model.3358_t
Valid prediction for GeneMark_model.3310_t
Valid prediction for Augustus_model.g1698.t1
Valid prediction for GeneMark_model.3348_t
Valid prediction for GeneMark_model.3308_t
Valid prediction for GlimmerHMM_glimmerT_2326-T1
Valid prediction for Augustus_model.g1688.t1
Valid prediction for GeneMark_model.3307_t
Valid prediction for snap_scaffold_1-snap.3043-T1
Valid prediction for GeneMark_model.3299_t
Valid prediction for CodingQuarry_transcript_2963-T1
Valid prediction for snap_scaffold_1-snap.3063-T1
Valid prediction for GeneMark_model.3342_t
Valid prediction for GeneMark_model.3332_t
Valid prediction for GeneMark_model.3302_t
Valid prediction for pasa_asmbl_1021.p1
Valid prediction for Augustus_model.g1699.t1
Valid prediction for GeneMark_model.3355_t
Valid prediction for GlimmerHMM_glimmerT_2318-T1
Valid prediction for GeneMark_model.3361_t
Valid prediction for GlimmerHMM_glimmerT_2310-T1
Valid prediction for Augustus_model.g1701.t1
Valid prediction for Augustus_model.g1685.t1
Valid prediction for snap_scaffold_1-snap.3066-T1
Valid prediction for Augustus_model.g1690.t1
Valid prediction for GeneMark_model.3297_t
Valid prediction for Augustus_model.g1697.t1
Valid prediction for snap_scaffold_1-snap.3046-T1
Valid prediction for GeneMark_model.3327_t
Valid prediction for snap_scaffold_1-snap.3057-T1
Valid prediction for snap_scaffold_1-snap.3069-T1
Valid prediction for GeneMark_model.3305_t
Valid prediction for GeneMark_model.3325_t
Valid prediction for snap_scaffold_1-snap.3042-T1
Valid prediction for Augustus_model.g1694.t1
Valid prediction for snap_scaffold_1-snap.3048-T1
Valid prediction for Augustus_model.g1691.t1
Valid prediction for GeneMark_model.3331_t
Valid prediction for snap_scaffold_1-snap.3056-T1
Valid prediction for GlimmerHMM_glimmerT_2307-T1
Valid prediction for Augustus_model.g1686.t1
Valid prediction for snap_scaffold_1-snap.3045-T1
Valid prediction for snap_scaffold_1-snap.3071-T1
Couldn't classify 190176, 190541
Sorry, prediction pasa_asmbl_1023.p2 fails validation.
(CCT)	 TT	190176-190541	GT	GAG
Valid prediction for GeneMark_model.3352_t
Valid prediction for GlimmerHMM_glimmerT_2316-T1
Valid prediction for GeneMark_model.3315_t
Valid prediction for GlimmerHMM_glimmerT_2314-T1
Valid prediction for snap_scaffold_1-snap.3039-T1
Valid prediction for GeneMark_model.3303_t
Valid prediction for GeneMark_model.3336_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14734, rend_intergenic: 2601  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17637, rend_intergenic: 14883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26136, rend_intergenic: 20673  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67409, rend_intergenic: 43545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73064, rend_intergenic: 70516  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81562, rend_intergenic: 80217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94246, rend_intergenic: 92341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102386, rend_intergenic: 94600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107570, rend_intergenic: 103181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122467, rend_intergenic: 109305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141714, rend_intergenic: 122907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161164, rend_intergenic: 156809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163699, rend_intergenic: 161796  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168749, rend_intergenic: 165360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172498, rend_intergenic: 168888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175912, rend_intergenic: 174986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177766, rend_intergenic: 177162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187410, rend_intergenic: 177853  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191781, rend_intergenic: 187559  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208763, rend_intergenic: 192393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 223222
-exon list size: 967


building trellis

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68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 29 predictions from path traversal
Error with prediction: snap lend_intergenic: 14734, rend_intergenic: 2601  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17637, rend_intergenic: 14883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26136, rend_intergenic: 20673  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67409, rend_intergenic: 43545  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73064, rend_intergenic: 70516  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81562, rend_intergenic: 80217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94246, rend_intergenic: 92341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102386, rend_intergenic: 94600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107570, rend_intergenic: 103181  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122467, rend_intergenic: 109305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 141714, rend_intergenic: 122907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161164, rend_intergenic: 156809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163699, rend_intergenic: 161796  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168749, rend_intergenic: 165360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172498, rend_intergenic: 168888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175912, rend_intergenic: 174986  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177766, rend_intergenic: 177162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 187410, rend_intergenic: 177853  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191781, rend_intergenic: 187559  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 208763, rend_intergenic: 192393  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 16 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 196851 - 223222
-exon list size: 82


building trellis

1.2    
2.4    
3.6    
4.8    
6.0    
7.1    
8.3    
9.5    
10.7    
11.9    
13.1    
14.3    
15.5    
16.7    
17.9    
19.0    
20.2    
21.4    
22.6    
23.8    
25.0    
26.2    
27.4    
28.6    
29.8    
31.0    
32.1    
33.3    
34.5    
35.7    
36.9    
38.1    
39.3    
40.5    
41.7    
42.9    
44.0    
45.2    
46.4    
47.6    
48.8    
50.0    
51.2    
52.4    
53.6    
54.8    
56.0    
57.1    
58.3    
59.5    
60.7    
61.9    
63.1    
64.3    
65.5    
66.7    
67.9    
69.0    
70.2    
71.4    
72.6    
73.8    
75.0    
76.2    
77.4    
78.6    
79.8    
81.0    
82.1    
83.3    
84.5    
85.7    
86.9    
88.1    
89.3    
90.5    
91.7    
92.9    
94.0    
95.2    
96.4    
97.6    
98.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 201566 - 223222
-exon list size: 64


building trellis

1.5    
3.0    
4.5    
6.1    
7.6    
9.1    
10.6    
12.1    
13.6    
15.2    
16.7    
18.2    
19.7    
21.2    
22.7    
24.2    
25.8    
27.3    
28.8    
30.3    
31.8    
33.3    
34.8    
36.4    
37.9    
39.4    
40.9    
42.4    
43.9    
45.5    
47.0    
48.5    
50.0    
51.5    
53.0    
54.5    
56.1    
57.6    
59.1    
60.6    
62.1    
63.6    
65.2    
66.7    
68.2    
69.7    
71.2    
72.7    
74.2    
75.8    
77.3    
78.8    
80.3    
81.8    
83.3    
84.8    
86.4    
87.9    
89.4    
90.9    
92.4    
93.9    
95.5    
97.0    
98.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 204903 - 223222
-exon list size: 48


building trellis

2.0    
4.0    
6.0    
8.0    
10.0    
12.0    
14.0    
16.0    
18.0    
20.0    
22.0    
24.0    
26.0    
28.0    
30.0    
32.0    
34.0    
36.0    
38.0    
40.0    
42.0    
44.0    
46.0    
48.0    
50.0    
52.0    
54.0    
56.0    
58.0    
60.0    
62.0    
64.0    
66.0    
68.0    
70.0    
72.0    
74.0    
76.0    
78.0    
80.0    
82.0    
84.0    
86.0    
88.0    
90.0    
92.0    
94.0    
96.0    
98.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 208677 - 223222
-exon list size: 25


building trellis

3.7    
7.4    
11.1    
14.8    
18.5    
22.2    
25.9    
29.6    
33.3    
37.0    
40.7    
44.4    
48.1    
51.9    
55.6    
59.3    
63.0    
66.7    
70.4    
74.1    
77.8    
81.5    
85.2    
88.9    
92.6    
96.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 209383 - 223222
-exon list size: 19


building trellis

4.8    
9.5    
14.3    
19.0    
23.8    
28.6    
33.3    
38.1    
42.9    
47.6    
52.4    
57.1    
61.9    
66.7    
71.4    
76.2    
81.0    
85.7    
90.5    
95.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support