-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_14132413-14359033

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g1412.t1
Valid prediction for Augustus_model.g1415.t1
Valid prediction for GeneMark_model.2639_t
Valid prediction for GlimmerHMM_glimmerT_1911-T1
Valid prediction for pasa_asmbl_2342.p2
Valid prediction for HiQ_model.g1406.t1
Valid prediction for GlimmerHMM_glimmerT_1905-T1
Valid prediction for CodingQuarry_transcript_2902-T1
Valid prediction for GlimmerHMM_glimmerT_1921-T1
Valid prediction for CodingQuarry_transcript_2896-T1
Valid prediction for snap_scaffold_1-snap.2467-T1
Valid prediction for HiQ_model.g1409.t1
Valid prediction for snap_scaffold_1-snap.2472-T1
Couldn't classify 93597, 93620
Sorry, prediction pasa_asmbl_2337.p1 fails validation.
(TTC)	 AC	93597-93620	GT	AGG
(GTG)	 AG	93800-94195	TA	AAT
-recovered pasa_asmbl_2337.p1, terminal, 93800, 94195
Valid prediction for GlimmerHMM_glimmerT_1923-T1
Valid prediction for HiQ_model.g1424.t1
Valid prediction for snap_scaffold_1-snap.2460-T1
Couldn't classify 73424, 73783
Sorry, prediction pasa_asmbl_2330.p1 fails validation.
(GAG)	 CA	73424-73783	AT	AGA
Valid prediction for CodingQuarry_transcript_2899-T1
Valid prediction for GlimmerHMM_glimmerT_1915-T1
Valid prediction for GeneMark_model.2637_t
Valid prediction for HiQ_model.g1413.t1
Valid prediction for snap_scaffold_1-snap.2480-T1
Valid prediction for Augustus_model.g1402.t1
Valid prediction for Augustus_model.g1419.t1
Valid prediction for GeneMark_model.2635_t
Valid prediction for Augustus_model.g1423.t1
Valid prediction for CodingQuarry_transcript_2894-T1
Valid prediction for pasa_asmbl_2354.p1
Valid prediction for snap_scaffold_1-snap.2452-T1
Valid prediction for CodingQuarry_transcript_2893-T1
Couldn't classify 186817, 186889
Sorry, prediction pasa_asmbl_2358.p1 fails validation.
(TCG)	 AC	186817-186889	GT	AGG
(GGT)	 AG	187798-187896	GT	AGG
(GGC)	 AG	188085-188180	GT	AGG
(GTG)	 AG	188832-188890	GT	AGG
(GAT)	 AG	189157-189226	GT	GTG
(CCA)	 AG	189314-189447	GT	CGG
(GCC)	 AG	189580-189802	GT	AGG
(CTT)	 AG	189947-190144	GT	AGG
(TTG)	 AG	190362-190563	GT	GCG
(GTG)	 AG	190699-190807	GT	AGG
(ATA)	 AG	190911-190969	GT	AGG
(AAT)	 AG	191326-191395	AG	AGA
-recovered pasa_asmbl_2358.p1, terminal, 191326, 191395
-recovered pasa_asmbl_2358.p1, internal, 187798, 187896
-recovered pasa_asmbl_2358.p1, internal, 188085, 188180
-recovered pasa_asmbl_2358.p1, internal, 188832, 188890
-recovered pasa_asmbl_2358.p1, internal, 189157, 189226
-recovered pasa_asmbl_2358.p1, internal, 189314, 189447
-recovered pasa_asmbl_2358.p1, internal, 189580, 189802
-recovered pasa_asmbl_2358.p1, internal, 189947, 190144
-recovered pasa_asmbl_2358.p1, internal, 190362, 190563
-recovered pasa_asmbl_2358.p1, internal, 190699, 190807
-recovered pasa_asmbl_2358.p1, internal, 190911, 190969
Couldn't classify 222348, 222356
Couldn't classify 222721, 222873
Sorry, prediction pasa_asmbl_2364.p1 fails validation.
(CTT)	 GA	222348-222356	GT	AGG
(GTG)	 AG	222461-222625	GT	ATG
(ACT)	 AG	222721-222873	GT	CAG
-recovered pasa_asmbl_2364.p1, internal, 222461, 222625
-recovered pasa_asmbl_2364.p1, internal, 222721, 222873
Valid prediction for snap_scaffold_1-snap.2459-T1
Valid prediction for GeneMark_model.2650_t
Valid prediction for snap_scaffold_1-snap.2447-T1
Valid prediction for GeneMark_model.2643_t
Couldn't classify 136207, 136259
Sorry, prediction pasa_asmbl_2341.p1 fails validation.
(CGG)	 CA	136207-136259	GT	AGG
(TTT)	 AG	136467-136596	GT	CTG
(ATG)	 AG	136669-136729	GT	AGG
(GCG)	 AG	136821-136935	GT	CAG
(GAC)	 AG	137097-137199	GT	AGG
(CTC)	 AG	137455-137646	AC	AGA
-recovered pasa_asmbl_2341.p1, initial, 136669, 136729
-recovered pasa_asmbl_2341.p1, terminal, 137455, 137646
-recovered pasa_asmbl_2341.p1, internal, 136467, 136596
-recovered pasa_asmbl_2341.p1, internal, 136669, 136729
-recovered pasa_asmbl_2341.p1, internal, 136821, 136935
-recovered pasa_asmbl_2341.p1, internal, 137097, 137199
Couldn't classify 131960, 132056
Couldn't classify 133450, 133602
Sorry, prediction pasa_asmbl_2338.p1 fails validation.
(CAC)	 GA	131960-132056	GT	ATG
(ATG)	 AG	132169-132239	GT	TGG
(CAT)	 AG	132326-132418	GT	CTG
(GTA)	 AG	132538-132635	GT	AGG
(TAC)	 AG	132853-132919	GT	AGG
(AAG)	 AG	133007-133137	GT	CAG
(GCA)	 AG	133259-133340	GT	TGG
(GCT)	 AG	133450-133602	GA	GAG
add_exon() Sorry, pasa_asmbl_2338.p1 132169-132239-initial-1 is invalid.
-recovered pasa_asmbl_2338.p1, initial, 132169, 132239
-recovered pasa_asmbl_2338.p1, internal, 132169, 132239
-recovered pasa_asmbl_2338.p1, internal, 132326, 132418
-recovered pasa_asmbl_2338.p1, internal, 132538, 132635
-recovered pasa_asmbl_2338.p1, internal, 132853, 132919
-recovered pasa_asmbl_2338.p1, internal, 133007, 133137
-recovered pasa_asmbl_2338.p1, internal, 133259, 133340
Valid prediction for pasa_asmbl_2326.p1
Couldn't classify 77318, 77674
Sorry, prediction pasa_asmbl_2331.p1 fails validation.
(GGA)	 CA	77318-77674	GA	GCG
Valid prediction for snap_scaffold_1-snap.2456-T1
Valid prediction for Augustus_model.g1430.t1
Couldn't classify 82424, 82741
Couldn't classify 83190, 83222
Couldn't classify 83256, 83323
Sorry, prediction pasa_asmbl_2332.p1 fails validation.
(GAT)	 AG	82424-82741	GT	AGG
(GTT)	 AG	82974-83065	GT	GGG
(TAA)	 AG	83190-83222	AT	CCA
(AGG)	 AC	83256-83323	GT	GGG
(CAA)	 AG	83480-83617	GT	TGG
(GCA)	 AG	83737-83818	GT	AGG
(GTT)	 AG	83931-84045	GT	AGG
(GAA)	 AG	84220-84318	GT	AGG
(GAA)	 AG	84398-84481	TG	AAT
-recovered pasa_asmbl_2332.p1, terminal, 84398, 84481
-recovered pasa_asmbl_2332.p1, internal, 82424, 82741
-recovered pasa_asmbl_2332.p1, internal, 82974, 83065
-recovered pasa_asmbl_2332.p1, internal, 83480, 83617
-recovered pasa_asmbl_2332.p1, internal, 83737, 83818
-recovered pasa_asmbl_2332.p1, internal, 83931, 84045
-recovered pasa_asmbl_2332.p1, internal, 84220, 84318
Valid prediction for snap_scaffold_1-snap.2468-T1
Valid prediction for GlimmerHMM_glimmerT_1916-T1
Valid prediction for snap_scaffold_1-snap.2454-T1
Valid prediction for CodingQuarry_transcript_2900-T1
Valid prediction for pasa_asmbl_2336.p1
Valid prediction for pasa_asmbl_2317.p1
Valid prediction for Augustus_model.g1432.t1
Valid prediction for HiQ_model.g1421.t1
Valid prediction for GlimmerHMM_glimmerT_1910-T1
Valid prediction for HiQ_model.g1420.t1
Valid prediction for GlimmerHMM_glimmerT_1907-T1
Couldn't classify 197001, 197210
Sorry, prediction pasa_asmbl_2766.p1 fails validation.
(TTC)	 GG	197001-197210	GT	CTG
(AGA)	 AG	197317-198019	GT	AGG
(GTT)	 AG	198454-198591	GT	TGG
(GAG)	 AG	198701-198875	GT	AGG
(TCG)	 AG	199108-199141	GA	GAG
-recovered pasa_asmbl_2766.p1, terminal, 199108, 199141
-recovered pasa_asmbl_2766.p1, internal, 197317, 198019
-recovered pasa_asmbl_2766.p1, internal, 198454, 198591
-recovered pasa_asmbl_2766.p1, internal, 198701, 198875
Valid prediction for GlimmerHMM_glimmerT_1909-T1
Valid prediction for snap_scaffold_1-snap.2451-T1
Valid prediction for GeneMark_model.2648_t
Valid prediction for HiQ_model.g1426.t1
Valid prediction for snap_scaffold_1-snap.2474-T1
Valid prediction for snap_scaffold_1-snap.2478-T1
Valid prediction for GlimmerHMM_glimmerT_1917-T1
Valid prediction for CodingQuarry_transcript_2895-T1
Valid prediction for GeneMark_model.2655_t
Valid prediction for GlimmerHMM_glimmerT_1920-T1
Valid prediction for snap_scaffold_1-snap.2470-T1
Valid prediction for GlimmerHMM_glimmerT_1925-T1
Couldn't classify 134640, 134688
Couldn't classify 135893, 136075
Sorry, prediction pasa_asmbl_2340.p1 fails validation.
(CAC)	 GT	134640-134688	GT	TTG
(TGT)	 AG	134801-134961	GT	AGG
(GGG)	 AG	135052-135126	GT	CGG
(CTG)	 AG	135360-135434	GT	AGG
(GTG)	 AG	135633-135809	GT	AGG
(AAC)	 AG	135893-136075	CT	CCC
-recovered pasa_asmbl_2340.p1, internal, 134801, 134961
-recovered pasa_asmbl_2340.p1, internal, 135052, 135126
-recovered pasa_asmbl_2340.p1, internal, 135360, 135434
-recovered pasa_asmbl_2340.p1, internal, 135633, 135809
Valid prediction for CodingQuarry_transcript_2906-T1
Valid prediction for GlimmerHMM_glimmerT_1919-T1
Valid prediction for GeneMark_model.2651_t
Valid prediction for GeneMark_model.2645_t
Couldn't classify 194587, 194590
Couldn't classify 195773, 196843
Sorry, prediction pasa_asmbl_2362.p1 fails validation.
(TCA)	 AG	194587-194590	GT	AAG
(TGG)	 AG	194704-194796	GT	AAG
(CCT)	 AG	194886-195082	GT	CAG
(TTA)	 AG	195202-195360	GT	AAG
(TCC)	 AG	195563-195679	GT	GGG
(GAG)	 AG	195773-196843	CC	CCC
-recovered pasa_asmbl_2362.p1, internal, 194587, 194590
-recovered pasa_asmbl_2362.p1, internal, 194704, 194796
-recovered pasa_asmbl_2362.p1, internal, 194886, 195082
-recovered pasa_asmbl_2362.p1, internal, 195202, 195360
-recovered pasa_asmbl_2362.p1, internal, 195563, 195679
Couldn't classify 215557, 215868
Sorry, prediction pasa_asmbl_898.p2 fails validation.
(TTG)	 CC	215557-215868	CA	AAC
Valid prediction for snap_scaffold_1-snap.2471-T1
Valid prediction for snap_scaffold_1-snap.2457-T1
Valid prediction for Augustus_model.g1414.t1
Valid prediction for snap_scaffold_1-snap.2466-T1
Valid prediction for snap_scaffold_1-snap.2473-T1
Valid prediction for snap_scaffold_1-snap.2465-T1
Valid prediction for GeneMark_model.2632_t
Valid prediction for GeneMark_model.2644_t
Valid prediction for HiQ_model.g1410.t1
Valid prediction for GlimmerHMM_glimmerT_1903-T1
Valid prediction for Augustus_model.g1427.t1
Valid prediction for Augustus_model.g1407.t1
Valid prediction for GeneMark_model.2638_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1-snap.2455-T1
Valid prediction for CodingQuarry_transcript_2903-T1
Couldn't classify 15957, 15975
Sorry, prediction pasa_asmbl_897.p1 fails validation.
(ACC)	 CT	15957-15975	GT	TGG
(GTG)	 AG	16167-16301	GT	ATG
(CCT)	 AG	16404-16429	GT	CAG
(GCT)	 AG	16526-16556	GT	AGG
(GAA)	 AG	16782-16885	AA	AAA
-recovered pasa_asmbl_897.p1, terminal, 16782, 16885
-recovered pasa_asmbl_897.p1, internal, 16167, 16301
-recovered pasa_asmbl_897.p1, internal, 16404, 16429
-recovered pasa_asmbl_897.p1, internal, 16526, 16556
Valid prediction for GlimmerHMM_glimmerT_1913-T1
Valid prediction for CodingQuarry_transcript_2892-T1
Valid prediction for HiQ_model.g1429.t1
Valid prediction for GeneMark_model.2633_t
Valid prediction for snap_scaffold_1-snap.2449-T1
Valid prediction for GlimmerHMM_glimmerT_1918-T1
Valid prediction for snap_scaffold_1-snap.2462-T1
Valid prediction for HiQ_model.g1405.t1
Valid prediction for snap_scaffold_1-snap.2463-T1
Valid prediction for snap_scaffold_1-snap.2479-T1
Valid prediction for GeneMark_model.2640_t
Valid prediction for Augustus_model.g1403.t1
Valid prediction for Augustus_model.g1428.t1
Valid prediction for Augustus_model.g1404.t1
Valid prediction for pasa_asmbl_899.p1
Valid prediction for CodingQuarry_transcript_2904-T1
Valid prediction for GeneMark_model.2652_t
Valid prediction for CodingQuarry_transcript_2905-T1
Valid prediction for pasa_asmbl_884.p1
Valid prediction for GlimmerHMM_glimmerT_1914-T1
Valid prediction for snap_scaffold_1-snap.2453-T1
Couldn't classify 108345, 108515
Sorry, prediction pasa_asmbl_882.p1 fails validation.
(ATG)	 GC	106682-107919	GT	AGG
(GCC)	 AG	108040-108103	GT	AGG
(ATC)	 AG	108345-108515	GG	AAG
-recovered pasa_asmbl_882.p1, initial, 106682, 107919
-recovered pasa_asmbl_882.p1, internal, 108040, 108103
Valid prediction for HiQ_model.g1431.t1
Valid prediction for GlimmerHMM_glimmerT_1904-T1
Couldn't classify 110985, 111021
Sorry, prediction pasa_asmbl_881.p1 fails validation.
(GGG)	 GC	110985-111021	GT	AGG
(ACG)	 AG	111665-112143	CT	GAC
-recovered pasa_asmbl_881.p1, terminal, 111665, 112143
Valid prediction for GlimmerHMM_glimmerT_1908-T1
Valid prediction for GeneMark_model.2646_t
Valid prediction for snap_scaffold_1-snap.2446-T1
Valid prediction for Augustus_model.g1411.t1
Valid prediction for GeneMark_model.2647_t
Valid prediction for GeneMark_model.2642_t
Valid prediction for snap_scaffold_1-snap.2477-T1
Valid prediction for GeneMark_model.2649_t
Valid prediction for Augustus_model.g1416.t1
Valid prediction for GeneMark_model.2634_t
Valid prediction for GlimmerHMM_glimmerT_1902-T1
Valid prediction for CodingQuarry_transcript_2901-T1
Valid prediction for GeneMark_model.2653_t
Valid prediction for Augustus_model.g1422.t1
Valid prediction for snap_scaffold_1-snap.2475-T1
Valid prediction for Augustus_model.g1425.t1
Valid prediction for GlimmerHMM_glimmerT_1922-T1
Valid prediction for Augustus_model.g1417.t1
Valid prediction for CodingQuarry_transcript_2898-T1
Valid prediction for snap_scaffold_1-snap.2458-T1
Valid prediction for GeneMark_model.2654_t
Valid prediction for snap_scaffold_1-snap.2469-T1
Valid prediction for GeneMark_model.2636_t
Valid prediction for snap_scaffold_1-snap.2450-T1
Valid prediction for Augustus_model.g1401.t1
Valid prediction for HiQ_model.g1418.t1
Couldn't classify 20741, 20825
Sorry, prediction pasa_asmbl_894.p1 fails validation.
(CAA)	 CA	20741-20825	GT	AGG
(ATG)	 AG	21423-24794	GT	AAG
(GGG)	 AG	24890-25006	GT	AGG
(CCC)	 AG	25177-25262	CA	GAC
add_exon() Sorry, pasa_asmbl_894.p1 21423-24794-initial-1 is invalid.
-recovered pasa_asmbl_894.p1, initial, 21423, 24794
-recovered pasa_asmbl_894.p1, terminal, 25177, 25262
-recovered pasa_asmbl_894.p1, internal, 21423, 24794
-recovered pasa_asmbl_894.p1, internal, 24890, 25006
Valid prediction for pasa_asmbl_890.p1
Valid prediction for HiQ_model.g1408.t1
Valid prediction for snap_scaffold_1-snap.2476-T1
Valid prediction for pasa_asmbl_872.p1
Valid prediction for snap_scaffold_1-snap.2461-T1
Valid prediction for snap_scaffold_1-snap.2464-T1
Valid prediction for snap_scaffold_1-snap.2448-T1
Valid prediction for GlimmerHMM_glimmerT_1906-T1
Valid prediction for GlimmerHMM_glimmerT_1924-T1
Valid prediction for GlimmerHMM_glimmerT_1912-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 136574, rend_intergenic: 132914  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 226621
-exon list size: 521


building trellis

0.2    
0.4    
0.6    
0.8    
1.0    
1.1    
1.3    
1.5    
1.7    
1.9    
2.1    
2.3    
2.5    
2.7    
2.9    
3.1    
3.3    
3.4    
3.6    
3.8    
4.0    
4.2    
4.4    
4.6    
4.8    
5.0    
5.2    
5.4    
5.5    
5.7    
5.9    
6.1    
6.3    
6.5    
6.7    
6.9    
7.1    
7.3    
7.5    
7.6    
7.8    
8.0    
8.2    
8.4    
8.6    
8.8    
9.0    
9.2    
9.4    
9.6    
9.8    
9.9    
10.1    
10.3    
10.5    
10.7    
10.9    
11.1    
11.3    
11.5    
11.7    
11.9    
12.0    
12.2    
12.4    
12.6    
12.8    
13.0    
13.2    
13.4    
13.6    
13.8    
14.0    
14.1    
14.3    
14.5    
14.7    
14.9    
15.1    
15.3    
15.5    
15.7    
15.9    
16.1    
16.3    
16.4    
16.6    
16.8    
17.0    
17.2    
17.4    
17.6    
17.8    
18.0    
18.2    
18.4    
18.5    
18.7    
18.9    
19.1    
19.3    
19.5    
19.7    
19.9    
20.1    
20.3    
20.5    
20.7    
20.8    
21.0    
21.2    
21.4    
21.6    
21.8    
22.0    
22.2    
22.4    
22.6    
22.8    
22.9    
23.1    
23.3    
23.5    
23.7    
23.9    
24.1    
24.3    
24.5    
24.7    
24.9    
25.0    
25.2    
25.4    
25.6    
25.8    
26.0    
26.2    
26.4    
26.6    
26.8    
27.0    
27.2    
27.3    
27.5    
27.7    
27.9    
28.1    
28.3    
28.5    
28.7    
28.9    
29.1    
29.3    
29.4    
29.6    
29.8    
30.0    
30.2    
30.4    
30.6    
30.8    
31.0    
31.2    
31.4    
31.5    
31.7    
31.9    
32.1    
32.3    
32.5    
32.7    
32.9    
33.1    
33.3    
33.5    
33.7    
33.8    
34.0    
34.2    
34.4    
34.6    
34.8    
35.0    
35.2    
35.4    
35.6    
35.8    
35.9    
36.1    
36.3    
36.5    
36.7    
36.9    
37.1    
37.3    
37.5    
37.7    
37.9    
38.0    
38.2    
38.4    
38.6    
38.8    
39.0    
39.2    
39.4    
39.6    
39.8    
40.0    
40.2    
40.3    
40.5    
40.7    
40.9    
41.1    
41.3    
41.5    
41.7    
41.9    
42.1    
42.3    
42.4    
42.6    
42.8    
43.0    
43.2    
43.4    
43.6    
43.8    
44.0    
44.2    
44.4    
44.6    
44.7    
44.9    
45.1    
45.3    
45.5    
45.7    
45.9    
46.1    
46.3    
46.5    
46.7    
46.8    
47.0    
47.2    
47.4    
47.6    
47.8    
48.0    
48.2    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.5    
49.7    
49.9    
50.1    
50.3    
50.5    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.8    
52.0    
52.2    
52.4    
52.6    
52.8    
53.0    
53.2    
53.3    
53.5    
53.7    
53.9    
54.1    
54.3    
54.5    
54.7    
54.9    
55.1    
55.3    
55.4    
55.6    
55.8    
56.0    
56.2    
56.4    
56.6    
56.8    
57.0    
57.2    
57.4    
57.6    
57.7    
57.9    
58.1    
58.3    
58.5    
58.7    
58.9    
59.1    
59.3    
59.5    
59.7    
59.8    
60.0    
60.2    
60.4    
60.6    
60.8    
61.0    
61.2    
61.4    
61.6    
61.8    
62.0    
62.1    
62.3    
62.5    
62.7    
62.9    
63.1    
63.3    
63.5    
63.7    
63.9    
64.1    
64.2    
64.4    
64.6    
64.8    
65.0    
65.2    
65.4    
65.6    
65.8    
66.0    
66.2    
66.3    
66.5    
66.7    
66.9    
67.1    
67.3    
67.5    
67.7    
67.9    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.2    
69.4    
69.6    
69.8    
70.0    
70.2    
70.4    
70.6    
70.7    
70.9    
71.1    
71.3    
71.5    
71.7    
71.9    
72.1    
72.3    
72.5    
72.7    
72.8    
73.0    
73.2    
73.4    
73.6    
73.8    
74.0    
74.2    
74.4    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.7    
75.9    
76.1    
76.3    
76.5    
76.7    
76.9    
77.1    
77.2    
77.4    
77.6    
77.8    
78.0    
78.2    
78.4    
78.6    
78.8    
79.0    
79.2    
79.3    
79.5    
79.7    
79.9    
80.1    
80.3    
80.5    
80.7    
80.9    
81.1    
81.3    
81.5    
81.6    
81.8    
82.0    
82.2    
82.4    
82.6    
82.8    
83.0    
83.2    
83.4    
83.6    
83.7    
83.9    
84.1    
84.3    
84.5    
84.7    
84.9    
85.1    
85.3    
85.5    
85.7    
85.9    
86.0    
86.2    
86.4    
86.6    
86.8    
87.0    
87.2    
87.4    
87.6    
87.8    
88.0    
88.1    
88.3    
88.5    
88.7    
88.9    
89.1    
89.3    
89.5    
89.7    
89.9    
90.1    
90.2    
90.4    
90.6    
90.8    
91.0    
91.2    
91.4    
91.6    
91.8    
92.0    
92.2    
92.4    
92.5    
92.7    
92.9    
93.1    
93.3    
93.5    
93.7    
93.9    
94.1    
94.3    
94.5    
94.6    
94.8    
95.0    
95.2    
95.4    
95.6    
95.8    
96.0    
96.2    
96.4    
96.6    
96.7    
96.9    
97.1    
97.3    
97.5    
97.7    
97.9    
98.1    
98.3    
98.5    
98.7    
98.9    
99.0    
99.2    
99.4    
99.6    
99.8    
-found 32 predictions from path traversal
Error with prediction: snap lend_intergenic: 136574, rend_intergenic: 132914  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support