-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_12869373-13133407

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.2312_t
Valid prediction for GeneMark_model.2334_t
Valid prediction for Augustus_model.g1308.t1
Couldn't classify 115422, 115502
Couldn't classify 117635, 117763
Sorry, prediction pasa_asmbl_2690.p1 fails validation.
(GCC)	 CA	115422-115502	GT	AGG
(AAA)	 AG	116134-116174	GT	GGG
(CTG)	 AG	116959-117031	GT	AGG
(AGT)	 AG	117147-117197	GT	CGG
(GCG)	 AG	117635-117763	GG	AGG
-recovered pasa_asmbl_2690.p1, internal, 116134, 116174
-recovered pasa_asmbl_2690.p1, internal, 116959, 117031
-recovered pasa_asmbl_2690.p1, internal, 117147, 117197
Valid prediction for GeneMark_model.2335_t
Valid prediction for HiQ_model.g1292.t1
Valid prediction for GlimmerHMM_glimmerT_1741-T1
Valid prediction for GeneMark_model.2329_t
Valid prediction for GlimmerHMM_glimmerT_1743-T1
Valid prediction for GeneMark_model.2354_t
Valid prediction for GeneMark_model.2340_t
Valid prediction for CodingQuarry_transcript_2868-T1
Valid prediction for GlimmerHMM_glimmerT_1749-T1
Valid prediction for GeneMark_model.2322_t
Valid prediction for GeneMark_model.2327_t
Valid prediction for GlimmerHMM_glimmerT_1764-T1
Valid prediction for GeneMark_model.2311_t
Valid prediction for GeneMark_model.2326_t
Valid prediction for snap_scaffold_1-snap.2263-T1
Valid prediction for GlimmerHMM_glimmerT_1759-T1
Valid prediction for GlimmerHMM_glimmerT_1746-T1
Valid prediction for pasa_asmbl_2274.p1
Valid prediction for snap_scaffold_1-snap.2239-T1
Valid prediction for GeneMark_model.2347_t
Valid prediction for Augustus_model.g1311.t1
Valid prediction for GeneMark_model.2314_t
Valid prediction for snap_scaffold_1-snap.2245-T1
Valid prediction for GlimmerHMM_glimmerT_1752-T1
Valid prediction for GlimmerHMM_glimmerT_1745-T1
Couldn't classify 26696, 26700
Sorry, prediction pasa_asmbl_2252.p1 fails validation.
(CTA)	 TA	26696-26700	GT	GAG
(GTG)	 AG	26887-27241	CA	GAC
-recovered pasa_asmbl_2252.p1, terminal, 26887, 27241
Valid prediction for GeneMark_model.2331_t
Valid prediction for GeneMark_model.2321_t
Valid prediction for HiQ_model.g1301.t1
Valid prediction for CodingQuarry_transcript_2864-T1
Valid prediction for HiQ_model.g1305.t1
Valid prediction for GeneMark_model.2352_t
Valid prediction for GlimmerHMM_glimmerT_1748-T1
Valid prediction for CodingQuarry_transcript_2858-T1
Valid prediction for snap_scaffold_1-snap.2256-T1
Valid prediction for GlimmerHMM_glimmerT_1755-T1
Valid prediction for snap_scaffold_1-snap.2258-T1
Valid prediction for CodingQuarry_transcript_2861-T1
Valid prediction for snap_scaffold_1-snap.2243-T1
Valid prediction for HiQ_model.g1314.t1
Valid prediction for Augustus_model.g1315.t1
Valid prediction for GeneMark_model.2338_t
Valid prediction for Augustus_model.g1290.t1
Valid prediction for Augustus_model.g1316.t1
Valid prediction for snap_scaffold_1-snap.2251-T1
Valid prediction for HiQ_model.g1303.t1
Valid prediction for CodingQuarry_transcript_2857-T1
Valid prediction for Augustus_model.g1298.t1
Valid prediction for pasa_asmbl_2261.p1
Valid prediction for snap_scaffold_1-snap.2260-T1
Valid prediction for snap_scaffold_1-snap.2237-T1
Valid prediction for snap_scaffold_1-snap.2252-T1
Valid prediction for pasa_asmbl_2266.p1
Couldn't classify 35450, 35479
Sorry, prediction pasa_asmbl_2254.p1 fails validation.
(ATC)	 AG	35450-35479	GT	TGG
(GAT)	 AG	35727-35791	GT	AGG
(GGC)	 AG	35979-36069	GT	AGG
(TGT)	 AG	36196-36382	GT	GGG
(ACT)	 AG	36504-36624	GT	AAG
(GAC)	 AG	36718-36778	GT	CTG
(ATC)	 AG	36963-37043	AC	AGA
-recovered pasa_asmbl_2254.p1, terminal, 36963, 37043
-recovered pasa_asmbl_2254.p1, internal, 35450, 35479
-recovered pasa_asmbl_2254.p1, internal, 35727, 35791
-recovered pasa_asmbl_2254.p1, internal, 35979, 36069
-recovered pasa_asmbl_2254.p1, internal, 36196, 36382
-recovered pasa_asmbl_2254.p1, internal, 36504, 36624
-recovered pasa_asmbl_2254.p1, internal, 36718, 36778
Valid prediction for snap_scaffold_1-snap.2223-T1
Valid prediction for snap_scaffold_1-snap.2266-T1
Valid prediction for pasa_asmbl_2275.p1
Valid prediction for GlimmerHMM_glimmerT_1767-T1
Valid prediction for Augustus_model.g1295.t1
Valid prediction for CodingQuarry_transcript_2860-T1
Couldn't classify 26071, 26183
Couldn't classify 26597, 26701
Sorry, prediction pasa_asmbl_2812.p1 fails validation.
(GAC)	 GC	26071-26183	GT	GGG
(ACT)	 AG	26339-26474	GT	AGG
(AAA)	 AG	26597-26701	TG	AGT
-recovered pasa_asmbl_2812.p1, internal, 26339, 26474
Valid prediction for GeneMark_model.2315_t
Couldn't classify 170832, 171299
Sorry, prediction pasa_asmbl_2281.p1 fails validation.
(TTC)	 CT	170832-171299	GT	ATG
(GTG)	 AG	171489-171674	GT	AGG
(CTG)	 AG	172044-172201	GT	AGG
(GGA)	 AG	172389-172585	GT	GAG
(GTA)	 AG	173072-173150	GT	AGG
(GTA)	 AG	173239-173329	AG	AGA
add_exon() Sorry, pasa_asmbl_2281.p1 172044-172201-terminal-2 is invalid.
-recovered pasa_asmbl_2281.p1, terminal, 172044, 172201
-recovered pasa_asmbl_2281.p1, terminal, 173239, 173329
-recovered pasa_asmbl_2281.p1, internal, 171489, 171674
-recovered pasa_asmbl_2281.p1, internal, 172044, 172201
-recovered pasa_asmbl_2281.p1, internal, 172389, 172585
-recovered pasa_asmbl_2281.p1, internal, 173072, 173150
Valid prediction for GlimmerHMM_glimmerT_1744-T1
Valid prediction for snap_scaffold_1-snap.2225-T1
Couldn't classify 31761, 31831
Sorry, prediction pasa_asmbl_2253.p1 fails validation.
(ATG)	 GG	30898-30991	GT	ATG
(ATA)	 AG	31104-31180	GT	AGG
(CGT)	 AG	31388-31532	GT	AGG
(GTG)	 AG	31761-31831	GA	TGG
-recovered pasa_asmbl_2253.p1, initial, 30898, 30991
-recovered pasa_asmbl_2253.p1, internal, 31104, 31180
-recovered pasa_asmbl_2253.p1, internal, 31388, 31532
Valid prediction for pasa_asmbl_2257.p1
Valid prediction for Augustus_model.g1306.t1
Valid prediction for GeneMark_model.2324_t
Valid prediction for snap_scaffold_1-snap.2226-T1
Couldn't classify 121414, 121446
Couldn't classify 122828, 122971
Sorry, prediction pasa_asmbl_2276.p1 fails validation.
(GAG)	 AG	121414-121446	GT	AGG
(GTG)	 AG	121603-121766	GT	ATG
(TGA)	 AG	121928-122040	GT	AGG
(AAA)	 AG	122132-122239	GT	GAG
(TCC)	 AG	122328-122410	GT	AGG
(GAG)	 AG	122656-122733	GT	AGG
(TAT)	 AG	122828-122971	CC	CTC
-recovered pasa_asmbl_2276.p1, internal, 121414, 121446
-recovered pasa_asmbl_2276.p1, internal, 121603, 121766
-recovered pasa_asmbl_2276.p1, internal, 121928, 122040
-recovered pasa_asmbl_2276.p1, internal, 122132, 122239
-recovered pasa_asmbl_2276.p1, internal, 122328, 122410
-recovered pasa_asmbl_2276.p1, internal, 122656, 122733
Valid prediction for GeneMark_model.2356_t
Valid prediction for GlimmerHMM_glimmerT_1754-T1
Valid prediction for snap_scaffold_1-snap.2227-T1
Valid prediction for snap_scaffold_1-snap.2230-T1
Valid prediction for GeneMark_model.2333_t
Valid prediction for snap_scaffold_1-snap.2228-T1
Valid prediction for snap_scaffold_1-snap.2242-T1
Valid prediction for snap_scaffold_1-snap.2247-T1
Valid prediction for snap_scaffold_1-snap.2238-T1
Valid prediction for Augustus_model.g1312.t1
Valid prediction for GeneMark_model.2313_t
Valid prediction for GeneMark_model.2345_t
Valid prediction for GeneMark_model.2350_t
Valid prediction for CodingQuarry_transcript_2863-T1
Valid prediction for GlimmerHMM_glimmerT_1763-T1
Valid prediction for snap_scaffold_1-snap.2250-T1
Valid prediction for snap_scaffold_1-snap.2232-T1
Valid prediction for HiQ_model.g1296.t1
Valid prediction for CodingQuarry_transcript_2859-T1
Valid prediction for Augustus_model.g1293.t1
Valid prediction for GlimmerHMM_glimmerT_1762-T1
Valid prediction for snap_scaffold_1-snap.2253-T1
Valid prediction for pasa_asmbl_2263.p1
Valid prediction for GlimmerHMM_glimmerT_1758-T1
Valid prediction for snap_scaffold_1-snap.2235-T1
Valid prediction for GlimmerHMM_glimmerT_1771-T1
Valid prediction for HiQ_model.g1294.t1
Valid prediction for GeneMark_model.2317_t
Valid prediction for pasa_asmbl_2268.p1
Couldn't classify 99674, 99743
Sorry, prediction pasa_asmbl_2271.p1 fails validation.
(AGT)	 TC	99674-99743	GT	TAG
(GAG)	 AG	99870-99913	GT	AGG
(TCA)	 AG	100060-100311	CT	GAC
-recovered pasa_asmbl_2271.p1, terminal, 100060, 100311
-recovered pasa_asmbl_2271.p1, internal, 99870, 99913

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.2319_t
Valid prediction for pasa_asmbl_792.p1
Valid prediction for Augustus_model.g1307.t1
Valid prediction for GeneMark_model.2358_t
Valid prediction for CodingQuarry_transcript_2862-T1
Valid prediction for CodingQuarry_transcript_2856-T1
Valid prediction for GeneMark_model.2316_t
Valid prediction for GlimmerHMM_glimmerT_1750-T1
Valid prediction for CodingQuarry_transcript_2872-T1
Valid prediction for GeneMark_model.2351_t
Valid prediction for snap_scaffold_1-snap.2254-T1
Valid prediction for Augustus_model.g1302.t1
Valid prediction for pasa_asmbl_783.p1
Valid prediction for pasa_asmbl_788.p1
Valid prediction for CodingQuarry_transcript_2869-T1
Valid prediction for HiQ_model.g1299.t1
Valid prediction for snap_scaffold_1-snap.2241-T1
Couldn't classify 47733, 47885
Couldn't classify 48191, 48352
Sorry, prediction pasa_asmbl_1250.p1 fails validation.
(GCC)	 CA	47733-47885	GC	AGG
(ACC)	 AG	48191-48352	AG	TGA
Valid prediction for snap_scaffold_1-snap.2257-T1
Valid prediction for snap_scaffold_1-snap.2265-T1
Valid prediction for GeneMark_model.2339_t
Valid prediction for snap_scaffold_1-snap.2255-T1
Valid prediction for GlimmerHMM_glimmerT_1770-T1
Valid prediction for snap_scaffold_1-snap.2229-T1
Valid prediction for GeneMark_model.2353_t
Valid prediction for snap_scaffold_1-snap.2246-T1
Valid prediction for Augustus_model.g1313.t1
Valid prediction for GlimmerHMM_glimmerT_1761-T1
Valid prediction for GeneMark_model.2349_t
Valid prediction for GlimmerHMM_glimmerT_1742-T1
Valid prediction for GlimmerHMM_glimmerT_1751-T1
Valid prediction for Augustus_model.g1300.t1
Valid prediction for GlimmerHMM_glimmerT_1765-T1
Valid prediction for snap_scaffold_1-snap.2262-T1
Valid prediction for GlimmerHMM_glimmerT_1760-T1
Valid prediction for GlimmerHMM_glimmerT_1757-T1
Valid prediction for HiQ_model.g1291.t1
Valid prediction for CodingQuarry_transcript_2866-T1
Valid prediction for snap_scaffold_1-snap.2236-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for CodingQuarry_transcript_2870-T1
Valid prediction for Augustus_model.g1320.t1
Valid prediction for pasa_asmbl_804.p1
Valid prediction for HiQ_model.g1297.t1
Couldn't classify 178779, 178807
Sorry, prediction pasa_asmbl_789.p1 fails validation.
(CCT)	 AG	178779-178807	GT	AGG
(ACT)	 AG	178955-179154	GT	TGG
(GCC)	 AG	179234-179409	GT	AGG
(CCT)	 AG	179539-179586	GT	AGG
-recovered pasa_asmbl_789.p1, terminal, 179539, 179586
-recovered pasa_asmbl_789.p1, internal, 178779, 178807
-recovered pasa_asmbl_789.p1, internal, 178955, 179154
-recovered pasa_asmbl_789.p1, internal, 179234, 179409
-recovered pasa_asmbl_789.p1, internal, 179539, 179586
Valid prediction for snap_scaffold_1-snap.2248-T1
Valid prediction for GeneMark_model.2357_t
Valid prediction for Augustus_model.g1319.t1
Valid prediction for GeneMark_model.2332_t
Valid prediction for GlimmerHMM_glimmerT_1747-T1
Valid prediction for Augustus_model.g1310.t1
Valid prediction for GlimmerHMM_glimmerT_1756-T1
Valid prediction for Augustus_model.g1309.t1
Valid prediction for GeneMark_model.2337_t
Valid prediction for snap_scaffold_1-snap.2224-T1
Valid prediction for GlimmerHMM_glimmerT_1768-T1
Valid prediction for pasa_asmbl_793.p1
Valid prediction for GeneMark_model.2336_t
Valid prediction for GlimmerHMM_glimmerT_1753-T1
Valid prediction for Augustus_model.g1304.t1
Valid prediction for snap_scaffold_1-snap.2261-T1
Valid prediction for GlimmerHMM_glimmerT_1766-T1
Valid prediction for Augustus_model.g1317.t1
Valid prediction for GlimmerHMM_glimmerT_1773-T1
Valid prediction for GeneMark_model.2325_t
Valid prediction for snap_scaffold_1-snap.2234-T1
Couldn't classify 28146, 28260
Sorry, prediction pasa_asmbl_802.p1 fails validation.
(ATC)	 AC	28146-28260	GT	AGG
(ATC)	 AG	28364-28479	GT	AGG
(TGG)	 AG	28588-28731	CC	AAC
-recovered pasa_asmbl_802.p1, terminal, 28588, 28731
-recovered pasa_asmbl_802.p1, internal, 28364, 28479
Valid prediction for GeneMark_model.2342_t
Valid prediction for snap_scaffold_1-snap.2249-T1
Valid prediction for GeneMark_model.2323_t
Valid prediction for GlimmerHMM_glimmerT_1774-T1
Valid prediction for snap_scaffold_1-snap.2240-T1
Couldn't classify 192749, 192825
Sorry, prediction pasa_asmbl_785.p1 fails validation.
(CTA)	 AT	192749-192825	GT	GTG
(CGT)	 AG	195194-195290	GT	AGG
(TCC)	 AG	195767-196684	GT	AGG
(CTG)	 AG	196835-196968	GT	AGG
(GGC)	 AG	197309-197360	GT	AGG
(GTG)	 AG	197714-197828	GT	AGG
(ACG)	 AG	198086-198271	GT	AGG
(ATT)	 AG	199433-199530	AA	GAA
-recovered pasa_asmbl_785.p1, terminal, 199433, 199530
-recovered pasa_asmbl_785.p1, internal, 195194, 195290
-recovered pasa_asmbl_785.p1, internal, 195767, 196684
-recovered pasa_asmbl_785.p1, internal, 196835, 196968
-recovered pasa_asmbl_785.p1, internal, 197309, 197360
-recovered pasa_asmbl_785.p1, internal, 197714, 197828
-recovered pasa_asmbl_785.p1, internal, 198086, 198271
Valid prediction for HiQ_model.g1322.t1
Valid prediction for GlimmerHMM_glimmerT_1772-T1
Valid prediction for Augustus_model.g1321.t1
Valid prediction for GeneMark_model.2346_t
Valid prediction for GeneMark_model.2348_t
Valid prediction for snap_scaffold_1-snap.2231-T1
Valid prediction for snap_scaffold_1-snap.2259-T1
Valid prediction for snap_scaffold_1-snap.2244-T1
Valid prediction for GeneMark_model.2328_t
Valid prediction for GeneMark_model.2344_t
Valid prediction for CodingQuarry_transcript_2865-T1
Valid prediction for GeneMark_model.2355_t
Valid prediction for GeneMark_model.2341_t
Valid prediction for GeneMark_model.2330_t
Valid prediction for GlimmerHMM_glimmerT_1769-T1
Valid prediction for Augustus_model.g1318.t1
Valid prediction for snap_scaffold_1-snap.2233-T1
Valid prediction for GeneMark_model.2318_t
Couldn't classify 38406, 38608
Sorry, prediction pasa_asmbl_797.p1 fails validation.
(GTC)	 AG	38406-38608	GT	AGG
(CAC)	 AG	38747-39059	GT	AGG
(GTG)	 AG	39189-39605	GT	AGG
(GTG)	 AG	39726-40460	AG	AGA
-recovered pasa_asmbl_797.p1, terminal, 39726, 40460
-recovered pasa_asmbl_797.p1, internal, 38406, 38608
-recovered pasa_asmbl_797.p1, internal, 38747, 39059
-recovered pasa_asmbl_797.p1, internal, 39189, 39605
Valid prediction for CodingQuarry_transcript_2873-T1
Valid prediction for snap_scaffold_1-snap.2264-T1
Valid prediction for GlimmerHMM_glimmerT_1775-T1
Couldn't classify 72957, 73094
Sorry, prediction pasa_asmbl_795.p2 fails validation.
(GCA)	 TA	72957-73094	GT	ATG
(TCC)	 AG	73189-73266	GT	AGG
(GAG)	 AG	73390-73536	AA	GAA
-recovered pasa_asmbl_795.p2, terminal, 73390, 73536
-recovered pasa_asmbl_795.p2, internal, 73189, 73266

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 123028, rend_intergenic: 118504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133547, rend_intergenic: 125744  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140827, rend_intergenic: 140325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153257, rend_intergenic: 147979  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160300, rend_intergenic: 157256  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199062, rend_intergenic: 190500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206793, rend_intergenic: 203683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217072, rend_intergenic: 212542  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219348, rend_intergenic: 217111  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229848, rend_intergenic: 220004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238402, rend_intergenic: 238326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256281, rend_intergenic: 238406  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 262268, rend_intergenic: 257865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 264035
-exon list size: 776


building trellis

0.1    
0.3    
0.4    
0.5    
0.6    
0.8    
0.9    
1.0    
1.2    
1.3    
1.4    
1.5    
1.7    
1.8    
1.9    
2.1    
2.2    
2.3    
2.4    
2.6    
2.7    
2.8    
3.0    
3.1    
3.2    
3.3    
3.5    
3.6    
3.7    
3.9    
4.0    
4.1    
4.2    
4.4    
4.5    
4.6    
4.8    
4.9    
5.0    
5.1    
5.3    
5.4    
5.5    
5.7    
5.8    
5.9    
6.0    
6.2    
6.3    
6.4    
6.6    
6.7    
6.8    
6.9    
7.1    
7.2    
7.3    
7.5    
7.6    
7.7    
7.8    
8.0    
8.1    
8.2    
8.4    
8.5    
8.6    
8.7    
8.9    
9.0    
9.1    
9.3    
9.4    
9.5    
9.6    
9.8    
9.9    
10.0    
10.2    
10.3    
10.4    
10.5    
10.7    
10.8    
10.9    
11.1    
11.2    
11.3    
11.4    
11.6    
11.7    
11.8    
12.0    
12.1    
12.2    
12.3    
12.5    
12.6    
12.7    
12.9    
13.0    
13.1    
13.2    
13.4    
13.5    
13.6    
13.8    
13.9    
14.0    
14.1    
14.3    
14.4    
14.5    
14.7    
14.8    
14.9    
15.0    
15.2    
15.3    
15.4    
15.6    
15.7    
15.8    
15.9    
16.1    
16.2    
16.3    
16.5    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.4    
17.5    
17.6    
17.7    
17.9    
18.0    
18.1    
18.3    
18.4    
18.5    
18.6    
18.8    
18.9    
19.0    
19.2    
19.3    
19.4    
19.5    
19.7    
19.8    
19.9    
20.1    
20.2    
20.3    
20.4    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.5    
21.6    
21.7    
21.9    
22.0    
22.1    
22.2    
22.4    
22.5    
22.6    
22.8    
22.9    
23.0    
23.1    
23.3    
23.4    
23.5    
23.7    
23.8    
23.9    
24.0    
24.2    
24.3    
24.4    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.6    
25.7    
25.8    
26.0    
26.1    
26.2    
26.3    
26.5    
26.6    
26.7    
26.9    
27.0    
27.1    
27.2    
27.4    
27.5    
27.6    
27.8    
27.9    
28.0    
28.1    
28.3    
28.4    
28.5    
28.7    
28.8    
28.9    
29.0    
29.2    
29.3    
29.4    
29.6    
29.7    
29.8    
29.9    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.8    
31.0    
31.1    
31.2    
31.4    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.3    
32.4    
32.5    
32.6    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.4    
34.6    
34.7    
34.8    
35.0    
35.1    
35.2    
35.3    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.4    
36.5    
36.6    
36.8    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.7    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.2    
42.3    
42.4    
42.5    
42.7    
42.8    
42.9    
43.1    
43.2    
43.3    
43.4    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.5    
44.6    
44.7    
44.9    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.7    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.6    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.5    
71.6    
71.7    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.0    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.6    
93.7    
93.8    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 44 predictions from path traversal
Error with prediction: snap lend_intergenic: 123028, rend_intergenic: 118504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133547, rend_intergenic: 125744  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140827, rend_intergenic: 140325  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 153257, rend_intergenic: 147979  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160300, rend_intergenic: 157256  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199062, rend_intergenic: 190500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 206793, rend_intergenic: 203683  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 217072, rend_intergenic: 212542  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219348, rend_intergenic: 217111  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229848, rend_intergenic: 220004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 238402, rend_intergenic: 238326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 256281, rend_intergenic: 238406  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 262268, rend_intergenic: 257865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 36 predictions persist after filtering for low support