-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1/scaffold_1_11021837-11300733

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.2003_t
Valid prediction for GeneMark_model.2010_t
Valid prediction for GlimmerHMM_glimmerT_1515-T1
Valid prediction for Augustus_model.g1118.t1
Valid prediction for GlimmerHMM_glimmerT_1535-T1
Valid prediction for snap_scaffold_1-snap.1959-T1
Valid prediction for GeneMark_model.2033_t
Valid prediction for GlimmerHMM_glimmerT_1539-T1
Valid prediction for Augustus_model.g1101.t1
Valid prediction for GlimmerHMM_glimmerT_1540-T1
Valid prediction for GeneMark_model.2018_t
Valid prediction for CodingQuarry_transcript_2761-T1
Valid prediction for snap_scaffold_1-snap.1954-T1
Valid prediction for GlimmerHMM_glimmerT_1528-T1
Valid prediction for pasa_asmbl_2070.p1
Valid prediction for GlimmerHMM_glimmerT_1522-T1
Valid prediction for pasa_asmbl_2050.p1
Valid prediction for HiQ_model.g1102.t1
Valid prediction for GlimmerHMM_glimmerT_1545-T1
Valid prediction for GlimmerHMM_glimmerT_1533-T1
Valid prediction for snap_scaffold_1-snap.1963-T1
Valid prediction for GlimmerHMM_glimmerT_1546-T1
Valid prediction for pasa_asmbl_2054.p1
Valid prediction for GlimmerHMM_glimmerT_1548-T1
Valid prediction for snap_scaffold_1-snap.1939-T1
Valid prediction for GlimmerHMM_glimmerT_1525-T1
Valid prediction for snap_scaffold_1-snap.1941-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.2012_t
Valid prediction for CodingQuarry_transcript_2762-T1
Valid prediction for GeneMark_model.2014_t
Couldn't classify 226270, 226367
Sorry, prediction pasa_asmbl_2775.p1 fails validation.
(CAC)	 AC	226270-226367	GT	AAG
(GAT)	 AG	228671-228812	GT	CAG
(GAT)	 AG	231212-231372	GT	TAG
(CTA)	 AG	233659-233787	GT	AAG
(GAT)	 AG	235574-235703	GT	TGG
(AAC)	 AG	235940-236093	GT	TGG
(GTC)	 AG	236221-236411	TG	AGT
-recovered pasa_asmbl_2775.p1, terminal, 236221, 236411
-recovered pasa_asmbl_2775.p1, internal, 228671, 228812
-recovered pasa_asmbl_2775.p1, internal, 231212, 231372
-recovered pasa_asmbl_2775.p1, internal, 233659, 233787
-recovered pasa_asmbl_2775.p1, internal, 235574, 235703
-recovered pasa_asmbl_2775.p1, internal, 235940, 236093
Valid prediction for snap_scaffold_1-snap.1930-T1
Valid prediction for GlimmerHMM_glimmerT_1543-T1
Valid prediction for snap_scaffold_1-snap.1956-T1
Valid prediction for GeneMark_model.2013_t
Valid prediction for GlimmerHMM_glimmerT_1536-T1
Valid prediction for snap_scaffold_1-snap.1950-T1
Couldn't classify 80483, 80518
Couldn't classify 81186, 81368
Sorry, prediction pasa_asmbl_2052.p1 fails validation.
(GTG)	 AT	80483-80518	GT	AGG
(ACG)	 AG	80621-80875	GT	AGG
(GTG)	 AG	81186-81368	TC	GGT
-recovered pasa_asmbl_2052.p1, internal, 80621, 80875
Valid prediction for GlimmerHMM_glimmerT_1532-T1
Valid prediction for CodingQuarry_transcript_2771-T1
Valid prediction for snap_scaffold_1-snap.1923-T1
Valid prediction for HiQ_model.g1112.t1
Valid prediction for Augustus_model.g1104.t1
Valid prediction for Augustus_model.g1099.t1
Valid prediction for Augustus_model.g1117.t1
Valid prediction for snap_scaffold_1-snap.1935-T1
Valid prediction for GlimmerHMM_glimmerT_1519-T1
Valid prediction for GeneMark_model.2023_t
Valid prediction for GlimmerHMM_glimmerT_1527-T1
Valid prediction for GeneMark_model.2016_t
Valid prediction for snap_scaffold_1-snap.1965-T1
Valid prediction for pasa_asmbl_2046.p1
Valid prediction for GlimmerHMM_glimmerT_1524-T1
Valid prediction for snap_scaffold_1-snap.1926-T1
Valid prediction for GeneMark_model.2042_t
Valid prediction for GeneMark_model.2007_t
Valid prediction for GeneMark_model.2009_t
Valid prediction for GeneMark_model.2011_t
Couldn't classify 84646, 84861
Couldn't classify 85245, 85427
Sorry, prediction pasa_asmbl_2790.p1 fails validation.
(GGC)	 TG	84646-84861	GT	AGG
(GTG)	 AG	85245-85427	TC	GGT
Valid prediction for pasa_asmbl_2061.p1
Couldn't classify 115765, 115848
Sorry, prediction pasa_asmbl_2059.p1 fails validation.
(AGA)	 TC	115765-115848	GT	TGG
(GCG)	 AG	116467-116600	GT	ACG
(CTG)	 AG	117205-117290	GT	AGG
(GGA)	 AG	117494-117630	GT	CTG
(GAC)	 AG	117829-117945	GT	TGG
(GAT)	 AG	118049-118150	GT	AGG
(GCC)	 AG	118243-118365	GT	AGG
(GGC)	 AG	118485-118565	AT	AGA
-recovered pasa_asmbl_2059.p1, terminal, 118485, 118565
-recovered pasa_asmbl_2059.p1, internal, 116467, 116600
-recovered pasa_asmbl_2059.p1, internal, 117205, 117290
-recovered pasa_asmbl_2059.p1, internal, 117494, 117630
-recovered pasa_asmbl_2059.p1, internal, 117829, 117945
-recovered pasa_asmbl_2059.p1, internal, 118049, 118150
-recovered pasa_asmbl_2059.p1, internal, 118243, 118365
Valid prediction for snap_scaffold_1-snap.1914-T1
Valid prediction for CodingQuarry_transcript_2759-T1
Valid prediction for snap_scaffold_1-snap.1962-T1
Couldn't classify 43442, 43924
Sorry, prediction pasa_asmbl_2042.p1 fails validation.
(ATG)	 GT	43442-43924	CA	CAC
Valid prediction for snap_scaffold_1-snap.1924-T1
Valid prediction for snap_scaffold_1-snap.1932-T1
Valid prediction for Augustus_model.g1106.t1
Valid prediction for GeneMark_model.2026_t
Valid prediction for Augustus_model.g1120.t1
Valid prediction for GeneMark_model.2036_t
Valid prediction for GeneMark_model.2027_t
Valid prediction for GlimmerHMM_glimmerT_1534-T1
Valid prediction for snap_scaffold_1-snap.1928-T1
Valid prediction for GeneMark_model.2025_t
Valid prediction for snap_scaffold_1-snap.1961-T1
Valid prediction for GeneMark_model.2015_t
Valid prediction for GeneMark_model.2039_t
Valid prediction for Augustus_model.g1108.t1
Valid prediction for CodingQuarry_transcript_2765-T1
Valid prediction for snap_scaffold_1-snap.1920-T1
Valid prediction for GlimmerHMM_glimmerT_1541-T1
Valid prediction for CodingQuarry_transcript_2770-T1
Valid prediction for CodingQuarry_transcript_2772-T1
Valid prediction for snap_scaffold_1-snap.1945-T1
Valid prediction for GeneMark_model.2029_t
Valid prediction for snap_scaffold_1-snap.1927-T1
Valid prediction for Augustus_model.g1100.t1
Valid prediction for Augustus_model.g1116.t1
Valid prediction for snap_scaffold_1-snap.1918-T1
Valid prediction for Augustus_model.g1103.t1
Valid prediction for CodingQuarry_transcript_2764-T1
Valid prediction for snap_scaffold_1-snap.1931-T1
Valid prediction for snap_scaffold_1-snap.1922-T1
Valid prediction for GeneMark_model.2005_t
Valid prediction for HiQ_model.g1122.t1
Valid prediction for HiQ_model.g1107.t1
Valid prediction for snap_scaffold_1-snap.1929-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.2020_t
Valid prediction for GlimmerHMM_glimmerT_1537-T1
Valid prediction for snap_scaffold_1-snap.1921-T1
Valid prediction for HiQ_model.g1111.t1
Valid prediction for snap_scaffold_1-snap.1937-T1
Valid prediction for pasa_asmbl_2066.p1
Valid prediction for snap_scaffold_1-snap.1925-T1
Valid prediction for GlimmerHMM_glimmerT_1521-T1
Valid prediction for pasa_asmbl_2080.p1
Valid prediction for CodingQuarry_transcript_2758-T1
Valid prediction for GeneMark_model.2030_t
Valid prediction for pasa_asmbl_2044.p1
Valid prediction for snap_scaffold_1-snap.1946-T1
Valid prediction for snap_scaffold_1-snap.1957-T1
Valid prediction for snap_scaffold_1-snap.1944-T1
Valid prediction for snap_scaffold_1-snap.1943-T1
Couldn't classify 74116, 74399
Couldn't classify 74641, 74664
Sorry, prediction CodingQuarry_transcript_2760-T1 fails validation.
(ATG)	 TG	69318-69357	GT	AGG
(TGT)	 AG	71599-72144	GT	TGG
(AGC)	 AG	72464-72763	GT	AGG
(ACA)	 AG	73641-73916	GT	AAG
(AGC)	 AG	74116-74399	AG	ACA
(ACA)	 TG	74641-74664	AA	AAA
-recovered CodingQuarry_transcript_2760-T1, initial, 69318, 69357
-recovered CodingQuarry_transcript_2760-T1, internal, 71599, 72144
-recovered CodingQuarry_transcript_2760-T1, internal, 72464, 72763
-recovered CodingQuarry_transcript_2760-T1, internal, 73641, 73916
Valid prediction for snap_scaffold_1-snap.1948-T1
Valid prediction for GeneMark_model.2044_t
Valid prediction for CodingQuarry_transcript_2767-T1
Valid prediction for snap_scaffold_1-snap.1952-T1
Valid prediction for GeneMark_model.2037_t
Valid prediction for snap_scaffold_1-snap.1947-T1
Valid prediction for GlimmerHMM_glimmerT_1547-T1
Valid prediction for HiQ_model.g1115.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.2024_t
Valid prediction for CodingQuarry_transcript_2766-T1
Couldn't classify 133196, 133305
Sorry, prediction pasa_asmbl_623.p1 fails validation.
(TTT)	 GT	133196-133305	GT	CGG
(GGC)	 AG	134005-134105	GT	AGG
(GAG)	 AG	134219-134323	GT	TGG
(GAC)	 AG	134479-134560	GT	AAG
(ATG)	 AG	134658-134766	GT	GGG
(AAC)	 AG	134878-135022	GT	TGG
(CCT)	 AG	135164-135251	GT	AGG
(CTC)	 AG	135576-135618	TT	AGT
add_exon() Sorry, pasa_asmbl_623.p1 134658-134766-initial-1 is invalid.
-recovered pasa_asmbl_623.p1, initial, 134658, 134766
add_exon() Sorry, pasa_asmbl_623.p1 134479-134560-terminal-3 is invalid.
-recovered pasa_asmbl_623.p1, terminal, 134479, 134560
-recovered pasa_asmbl_623.p1, terminal, 135576, 135618
-recovered pasa_asmbl_623.p1, internal, 134005, 134105
-recovered pasa_asmbl_623.p1, internal, 134219, 134323
-recovered pasa_asmbl_623.p1, internal, 134479, 134560
-recovered pasa_asmbl_623.p1, internal, 134658, 134766
-recovered pasa_asmbl_623.p1, internal, 134878, 135022
-recovered pasa_asmbl_623.p1, internal, 135164, 135251
Valid prediction for snap_scaffold_1-snap.1919-T1
Valid prediction for Augustus_model.g1095.t1
Valid prediction for GeneMark_model.2000_t
Valid prediction for snap_scaffold_1-snap.1913-T1
Valid prediction for GlimmerHMM_glimmerT_1520-T1
Valid prediction for GlimmerHMM_glimmerT_1523-T1
Valid prediction for snap_scaffold_1-snap.1955-T1
Valid prediction for Augustus_model.g1097.t1
Valid prediction for GlimmerHMM_glimmerT_1516-T1
Valid prediction for snap_scaffold_1-snap.1940-T1
Couldn't classify 144449, 144499
Couldn't classify 145022, 145087
Sorry, prediction pasa_asmbl_1282.p1 fails validation.
(AAC)	 TG	144449-144499	GT	AGG
(CTG)	 AG	144610-144840	GT	AGG
(CTG)	 AG	145022-145087	GG	AGG
-recovered pasa_asmbl_1282.p1, internal, 144610, 144840
Valid prediction for snap_scaffold_1-snap.1916-T1
Valid prediction for snap_scaffold_1-snap.1953-T1
Valid prediction for GeneMark_model.2034_t
Valid prediction for snap_scaffold_1-snap.1964-T1
Valid prediction for GeneMark_model.2028_t
Valid prediction for snap_scaffold_1-snap.1942-T1
Valid prediction for Augustus_model.g1096.t1
Valid prediction for snap_scaffold_1-snap.1938-T1
Valid prediction for snap_scaffold_1-snap.1960-T1
Valid prediction for snap_scaffold_1-snap.1951-T1
Valid prediction for GeneMark_model.2040_t
Valid prediction for snap_scaffold_1-snap.1958-T1
Valid prediction for GeneMark_model.2032_t
Valid prediction for CodingQuarry_transcript_2757-T1
Valid prediction for GeneMark_model.2006_t
Valid prediction for GeneMark_model.2035_t
Valid prediction for Augustus_model.g1113.t1
Valid prediction for HiQ_model.g1109.t1
Valid prediction for GlimmerHMM_glimmerT_1518-T1
Valid prediction for snap_scaffold_1-snap.1936-T1
Valid prediction for GlimmerHMM_glimmerT_1526-T1
Valid prediction for Augustus_model.g1098.t1
Valid prediction for GeneMark_model.2021_t
Valid prediction for GlimmerHMM_glimmerT_1549-T1
Valid prediction for GlimmerHMM_glimmerT_1531-T1
Couldn't classify 167604, 167651
Sorry, prediction pasa_asmbl_617.p1 fails validation.
(GAG)	 GA	167604-167651	GT	AGG
(GTG)	 AG	167808-167864	GT	GTG
(CCA)	 AG	168067-168192	GT	AGG
(AAG)	 AG	168409-168533	GT	GGG
(CCT)	 AG	168682-168733	GT	CTG
(GAG)	 AG	168856-168926	GT	AAG
(GTT)	 AG	169026-169193	GT	CAG
(GAG)	 AG	169836-169944	GT	AGG
(GCT)	 AG	170258-170635	GA	AAG
-recovered pasa_asmbl_617.p1, terminal, 170258, 170635
-recovered pasa_asmbl_617.p1, internal, 167808, 167864
-recovered pasa_asmbl_617.p1, internal, 168067, 168192
-recovered pasa_asmbl_617.p1, internal, 168409, 168533
-recovered pasa_asmbl_617.p1, internal, 168682, 168733
-recovered pasa_asmbl_617.p1, internal, 168856, 168926
-recovered pasa_asmbl_617.p1, internal, 169026, 169193
-recovered pasa_asmbl_617.p1, internal, 169836, 169944
Valid prediction for GeneMark_model.2041_t
Valid prediction for GeneMark_model.2017_t
Valid prediction for snap_scaffold_1-snap.1917-T1
Valid prediction for snap_scaffold_1-snap.1933-T1
Couldn't classify 71150, 71461
Sorry, prediction pasa_asmbl_2762.p1 fails validation.
(CTC)	 CC	71150-71461	GG	GTG
Valid prediction for snap_scaffold_1-snap.1949-T1
Valid prediction for GeneMark_model.2038_t
Valid prediction for Augustus_model.g1123.t1
Valid prediction for GeneMark_model.2043_t
Valid prediction for GeneMark_model.2031_t
Valid prediction for GlimmerHMM_glimmerT_1529-T1
Valid prediction for GeneMark_model.2022_t
Valid prediction for Augustus_model.g1094.t1
Valid prediction for GeneMark_model.2004_t
Valid prediction for CodingQuarry_transcript_2768-T1
Valid prediction for snap_scaffold_1-snap.1934-T1
Valid prediction for CodingQuarry_transcript_2769-T1
Valid prediction for GlimmerHMM_glimmerT_1542-T1
Valid prediction for Augustus_model.g1121.t1
Valid prediction for Augustus_model.g1119.t1
Couldn't classify 241206, 241295
Sorry, prediction pasa_asmbl_614.p1 fails validation.
(AAT)	 AG	241206-241295	GT	TGG
(GTT)	 AG	243069-243187	GT	AGG
(ATC)	 AG	243463-243576	GT	CTG
(GTA)	 AG	243896-244037	GT	AGG
(GAA)	 AG	244206-244322	GT	AGG
(ATG)	 AG	244542-244607	GT	AGG
(GAT)	 AG	244741-244817	GT	AGG
(ATC)	 AG	245396-245489	GG	AGG
-recovered pasa_asmbl_614.p1, initial, 244542, 244607
-recovered pasa_asmbl_614.p1, terminal, 245396, 245489
-recovered pasa_asmbl_614.p1, internal, 241206, 241295
-recovered pasa_asmbl_614.p1, internal, 243069, 243187
-recovered pasa_asmbl_614.p1, internal, 243463, 243576
-recovered pasa_asmbl_614.p1, internal, 243896, 244037
-recovered pasa_asmbl_614.p1, internal, 244206, 244322
-recovered pasa_asmbl_614.p1, internal, 244542, 244607
-recovered pasa_asmbl_614.p1, internal, 244741, 244817
Valid prediction for GeneMark_model.2008_t
Valid prediction for Augustus_model.g1093.t1
Couldn't classify 165345, 165615
Couldn't classify 167496, 167549
Sorry, prediction pasa_asmbl_620.p1 fails validation.
(GCA)	 AA	165345-165615	GT	TCG
(GCC)	 AG	166185-166261	GT	AGG
(GAG)	 AG	166407-166508	GT	CGG
(AGA)	 AG	166732-166791	GT	AGG
(CAA)	 AG	166885-166954	GT	AGG
(CAA)	 AG	167059-167224	GT	CGG
(AAC)	 AG	167321-167390	GT	CGG
(GTG)	 AG	167496-167549	GG	CGG
-recovered pasa_asmbl_620.p1, internal, 166185, 166261
-recovered pasa_asmbl_620.p1, internal, 166407, 166508
-recovered pasa_asmbl_620.p1, internal, 166732, 166791
-recovered pasa_asmbl_620.p1, internal, 166885, 166954
-recovered pasa_asmbl_620.p1, internal, 167059, 167224
-recovered pasa_asmbl_620.p1, internal, 167321, 167390
Valid prediction for HiQ_model.g1110.t1
Valid prediction for GlimmerHMM_glimmerT_1517-T1
Valid prediction for HiQ_model.g1114.t1
Valid prediction for GeneMark_model.2019_t
Valid prediction for snap_scaffold_1-snap.1915-T1
Valid prediction for GlimmerHMM_glimmerT_1530-T1
Valid prediction for Augustus_model.g1105.t1
Valid prediction for GlimmerHMM_glimmerT_1544-T1
Valid prediction for GeneMark_model.2001_t
Valid prediction for GlimmerHMM_glimmerT_1538-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13412, rend_intergenic: 6124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35464, rend_intergenic: 33409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123615, rend_intergenic: 120423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129892, rend_intergenic: 126722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139806, rend_intergenic: 130359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188071, rend_intergenic: 178410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 213292, rend_intergenic: 212120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223507, rend_intergenic: 214632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227695, rend_intergenic: 223991  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231779, rend_intergenic: 228728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243856, rend_intergenic: 240448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 275692, rend_intergenic: 267608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 278897
-exon list size: 770


building trellis

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23.1    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
24.0    
24.1    
24.2    
24.4    
24.5    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.5    
25.6    
25.8    
25.9    
26.0    
26.2    
26.3    
26.4    
26.6    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.5    
27.6    
27.7    
27.8    
28.0    
28.1    
28.2    
28.4    
28.5    
28.6    
28.8    
28.9    
29.0    
29.1    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.1    
30.2    
30.3    
30.4    
30.6    
30.7    
30.8    
31.0    
31.1    
31.2    
31.3    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.3    
32.4    
32.5    
32.6    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.5    
34.6    
34.7    
34.8    
35.0    
35.1    
35.2    
35.4    
35.5    
35.6    
35.8    
35.9    
36.0    
36.1    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.6    
37.7    
37.8    
38.0    
38.1    
38.2    
38.3    
38.5    
38.6    
38.7    
38.9    
39.0    
39.1    
39.2    
39.4    
39.5    
39.6    
39.8    
39.9    
40.0    
40.2    
40.3    
40.4    
40.5    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.8    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.2    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.6    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.5    
75.6    
75.8    
75.9    
76.0    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.2    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.7    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 13412, rend_intergenic: 6124  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35464, rend_intergenic: 33409  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123615, rend_intergenic: 120423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129892, rend_intergenic: 126722  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139806, rend_intergenic: 130359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188071, rend_intergenic: 178410  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 213292, rend_intergenic: 212120  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 223507, rend_intergenic: 214632  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227695, rend_intergenic: 223991  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231779, rend_intergenic: 228728  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 243856, rend_intergenic: 240448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 275692, rend_intergenic: 267608  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 35 predictions persist after filtering for low support