1967004 + 0 in total (QC-passed reads + QC-failed reads) 908454 + 0 primary 1058550 + 0 secondary 0 + 0 supplementary 0 + 0 duplicates 0 + 0 primary duplicates 1893809 + 0 mapped (96.28% : N/A) 868756 + 0 primary mapped (95.63% : N/A) 908454 + 0 paired in sequencing 454227 + 0 read1 454227 + 0 read2 829058 + 0 properly paired (91.26% : N/A) 829058 + 0 with itself and mate mapped 39698 + 0 singletons (4.37% : N/A) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)