Index of /pp/Hi-C~SALSA/contents/SALSA_HiC

 Name                                   Last modified      Size  Description
 Parent Directory                                            -   
 alignment_iteration_1.bed              2022-05-02 01:05   14G  
 alignments.txt                         2022-05-02 04:10  4.4G  
 alignments_sorted.txt                  2022-05-02 04:20  4.4G  
 alignment_iteration_2.bed              2022-05-02 01:52  4.3G  
 alignment_iteration_3.bed              2022-05-02 02:31  4.1G  
 alignment_iteration_4.bed              2022-05-02 03:10  4.0G  
 alignment_iteration_5.bed              2022-05-02 03:47  4.0G  
 scaffolds_FINAL.fasta                  2022-05-02 03:55  1.0G  
 assembly.cleaned.fasta                 2022-05-02 01:05  1.0G  
 salsa_scaffolds.hic                    2022-05-02 04:56  323M  
 contig_links_scaled_sorted_iteration_1 2022-05-02 01:17   38M  
 contig_links_scaled_iteration_1        2022-05-02 01:17   38M  
 contig_links_iteration_1               2022-05-02 01:17   19M  
 contig_links_scaled_sorted_iteration_2 2022-05-02 01:57   19M  
 contig_links_scaled_iteration_2        2022-05-02 01:57   19M  
 contig_links_scaled_sorted_iteration_3 2022-05-02 02:36   14M  
 contig_links_scaled_iteration_3        2022-05-02 02:36   14M  
 contig_links_scaled_sorted_iteration_4 2022-05-02 03:15   13M  
 contig_links_scaled_iteration_4        2022-05-02 03:15   13M  
 contig_links_iteration_2               2022-05-02 01:57  9.9M  
 contig_links_iteration_3               2022-05-02 02:36  7.4M  
 contig_links_iteration_4               2022-05-02 03:15  6.8M  
 scaffolds_iteration_1.p                2022-05-02 01:40   41K  
 scaffolds_iteration_2.p                2022-05-02 02:20   40K  
 scaffolds_FINAL.agp                    2022-05-02 03:55   40K  
 scaffolds_iteration_3.p                2022-05-02 02:59   40K  
 scaffolds_iteration_4.p                2022-05-02 03:37   39K  
 scaffolds_FINAL.fasta.fai              2022-05-02 03:55   15K  
 re_counts_iteration_1                  2022-05-02 01:05   15K  
 re_counts_iteration_2                  2022-05-02 01:52   12K  
 re_counts_iteration_3                  2022-05-02 02:31   11K  
 scaffold_length_iteration_1            2022-05-02 01:05   11K  
 re_counts_iteration_4                  2022-05-02 03:10   11K  
 re_counts_iteration_5                  2022-05-02 03:47   11K  
 scaffold_length_iteration_2            2022-05-02 01:52  9.2K  
 scaffold_length_iteration_3            2022-05-02 02:31  8.3K  
 scaffold_length_iteration_4            2022-05-02 03:10  8.0K  
 chromosome_sizes.tsv                   2022-05-02 03:55  8.0K  
 scaffold_length_iteration_5            2022-05-02 03:47  8.0K  
 breakpoints_iteration_2.txt            2022-05-02 01:17  4.5K  
 breakpoints_iteration_3.txt            2022-05-02 01:57  3.9K  
 breakpoints_iteration_4.txt            2022-05-02 02:36  3.5K  
 breakpoints_iteration_5.txt            2022-05-02 03:15  3.3K  
 commands.log                           2022-05-02 03:47  3.2K  
 misasm_iteration_2.report              2022-05-02 01:40  776   
 misasm_iteration_3.report              2022-05-02 02:20  635   
 input_breaks                           2022-05-02 00:58  557   
 misasm_iteration_4.report              2022-05-02 02:59  434   
 misasm_iteration_5.report              2022-05-02 03:37  371   
 links_avoid_iteration_2                2022-05-02 01:40   78   
 misasm_5.log                           2022-05-02 03:37    0   
 misasm_5.DONE                          2022-05-02 03:47    0   
 misasm_4.log                           2022-05-02 02:59    0   
 misasm_4.DONE                          2022-05-02 03:10    0   
 misasm_3.log                           2022-05-02 02:20    0   
 misasm_3.DONE                          2022-05-02 02:31    0   
 misasm_2.DONE                          2022-05-02 01:52    0   
 links_avoid_iteration_5                2022-05-02 03:37    0   
 links_avoid_iteration_4                2022-05-02 02:59    0   
 links_avoid_iteration_3                2022-05-02 02:20    0