# This output was generated with AUGUSTUS (version 3.4.0). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /opt/augustus-3.4.0/config/ ... # saccharomyces version. Using default transition matrix. # Looks like split/input_2/input_2.fa_chunk_0000011 is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 158816, name = 6_related_000073F_1) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 6_related_000073F_1 AUGUSTUS gene 1918 3855 0.94 - . g1 6_related_000073F_1 AUGUSTUS transcript 1918 3855 0.94 - . g1.t1 6_related_000073F_1 AUGUSTUS stop_codon 1918 1920 . - 0 transcript_id "g1.t1"; gene_id "g1"; 6_related_000073F_1 AUGUSTUS CDS 1918 3855 0.94 - 0 transcript_id "g1.t1"; gene_id "g1"; 6_related_000073F_1 AUGUSTUS start_codon 3853 3855 . - 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MFATSSYDSHPSCTISLIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFATRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFSRLALTVDNQERWMDFLITNLGGEDVILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEISYSHRAAATQKAQSLNSRT # PEPPTEPTQIEVPLEATLEESKSAVVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLIPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSSDLQEHRQV # VREVLIRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPAPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTRKDISFTWM # DTQQQAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPANETMRSTTGKC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 6_related_000073F_1 AUGUSTUS gene 4735 5082 0.99 - . g2 6_related_000073F_1 AUGUSTUS transcript 4735 5082 0.99 - . g2.t1 6_related_000073F_1 AUGUSTUS stop_codon 4735 4737 . - 0 transcript_id "g2.t1"; gene_id "g2"; 6_related_000073F_1 AUGUSTUS CDS 4735 5082 0.99 - 0 transcript_id "g2.t1"; gene_id "g2"; 6_related_000073F_1 AUGUSTUS start_codon 5080 5082 . - 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MSTPIPPATPAPPASAEDLMTQLIKQVANLATAMEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKS # QAKLIKSALGFFTESAGDWATPHLLHLNAEHPPFGGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 6_related_000073F_1 AUGUSTUS gene 5783 6742 0.79 + . g3 6_related_000073F_1 AUGUSTUS transcript 5783 6742 0.79 + . g3.t1 6_related_000073F_1 AUGUSTUS start_codon 5783 5785 . + 0 transcript_id "g3.t1"; gene_id "g3"; 6_related_000073F_1 AUGUSTUS CDS 5783 5829 0.81 + 0 transcript_id "g3.t1"; gene_id "g3"; 6_related_000073F_1 AUGUSTUS CDS 5938 6742 0.97 + 1 transcript_id "g3.t1"; gene_id "g3"; 6_related_000073F_1 AUGUSTUS stop_codon 6740 6742 . + 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MGFDSDVIVQVRASRRRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLM # EANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGW # MMPEGGDSKRYKLRDNARMPRDDPNIPCYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLVVWMTRIEELSDRLGNLEAHREDDVRVF # NQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 6_related_000073F_1 AUGUSTUS gene 6772 7779 1 + . g4 6_related_000073F_1 AUGUSTUS transcript 6772 7779 1 + . g4.t1 6_related_000073F_1 AUGUSTUS start_codon 6772 6774 . + 0 transcript_id "g4.t1"; gene_id "g4"; 6_related_000073F_1 AUGUSTUS CDS 6772 7779 1 + 0 transcript_id "g4.t1"; gene_id "g4"; 6_related_000073F_1 AUGUSTUS stop_codon 7777 7779 . + 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVDESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGIEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRKVRPRTKKNNYVSTLSKDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 6_related_000073F_1 AUGUSTUS gene 7831 11430 0.22 + . g5 6_related_000073F_1 AUGUSTUS transcript 7831 11430 0.22 + . g5.t1 6_related_000073F_1 AUGUSTUS start_codon 7831 7833 . + 0 transcript_id "g5.t1"; gene_id "g5"; 6_related_000073F_1 AUGUSTUS CDS 7831 8077 0.47 + 0 transcript_id "g5.t1"; gene_id "g5"; 6_related_000073F_1 AUGUSTUS CDS 8278 8801 0.39 + 2 transcript_id "g5.t1"; gene_id "g5"; 6_related_000073F_1 AUGUSTUS CDS 8942 9320 0.64 + 0 transcript_id "g5.t1"; gene_id "g5"; 6_related_000073F_1 AUGUSTUS CDS 9467 11430 0.77 + 2 transcript_id "g5.t1"; gene_id "g5"; 6_related_000073F_1 AUGUSTUS stop_codon 11428 11430 . + 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTV # GTYPHGYKRCEQETFSKKELSEAYVLASREHLKSQDDQAEEIINCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSFFLQNGRIKPKPV # RKKVQKRRFVEPILQKFSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEVLKRGLNHSKDLNRQDRSPINLIDETNKQVV # NEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMM # CKQEAGFAWEPRIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGIPPATADLARSFSGRSCGGTLDLYVGYDERELDQLSRDMTTFQT # PYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRFVWEHFQNMNRVIQRMKYAGGTFSGTK # AFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRESPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPSEKKRFFNYFGSMTLNEREARFLQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVEEDGGEPINFIMGDGETEELYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLEAKNATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLEEMSKDEQIKFIRLIK # KFQVNDQGRLYHRNTDQPDQPQLVVEKEKCMHMLNSAHDCLGHKGVFATNDFLQKRFWWLSRSGRGGVTNGAGKRSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 6_related_000073F_1 AUGUSTUS gene 11871 14180 0.48 - . g6 6_related_000073F_1 AUGUSTUS transcript 11871 14180 0.48 - . g6.t1 6_related_000073F_1 AUGUSTUS stop_codon 11871 11873 . - 0 transcript_id "g6.t1"; gene_id "g6"; 6_related_000073F_1 AUGUSTUS CDS 11871 14180 0.48 - 0 transcript_id "g6.t1"; gene_id "g6"; 6_related_000073F_1 AUGUSTUS start_codon 14178 14180 . - 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRN # FAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPTRIEVDTSGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREM # LAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTHRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVQ # IAASILQNPLEDRIWKASEWEAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFW # WPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLH # GLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLP # LFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLAWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLD # LPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSQAPKIVRAFHKKHP # TAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 6_related_000073F_1 AUGUSTUS gene 16436 16801 0.77 - . g7 6_related_000073F_1 AUGUSTUS transcript 16436 16801 0.77 - . g7.t1 6_related_000073F_1 AUGUSTUS stop_codon 16436 16438 . - 0 transcript_id "g7.t1"; gene_id "g7"; 6_related_000073F_1 AUGUSTUS CDS 16436 16801 0.77 - 0 transcript_id "g7.t1"; gene_id "g7"; 6_related_000073F_1 AUGUSTUS start_codon 16799 16801 . - 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 6_related_000073F_1 AUGUSTUS gene 17903 18748 0.54 + . g8 6_related_000073F_1 AUGUSTUS transcript 17903 18748 0.54 + . g8.t1 6_related_000073F_1 AUGUSTUS start_codon 17903 17905 . + 0 transcript_id "g8.t1"; gene_id "g8"; 6_related_000073F_1 AUGUSTUS CDS 17903 18748 0.54 + 0 transcript_id "g8.t1"; gene_id "g8"; 6_related_000073F_1 AUGUSTUS stop_codon 18746 18748 . + 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MLAWLEEKYGIRGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTG # AEPLLPFDIVESTWLVNPPNRILTRDELIGYHAQALSKHNSFIEKVRHRVDANKVAELRRFERKYRHTIKNWDFKPGQLVQVRNSGIEKSLDRKMYPR # YRGPMVIIRQTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEE # LSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 6_related_000073F_1 AUGUSTUS gene 19010 20463 0.58 - . g9 6_related_000073F_1 AUGUSTUS transcript 19010 20463 0.58 - . g9.t1 6_related_000073F_1 AUGUSTUS stop_codon 19010 19012 . - 0 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS CDS 19010 19437 1 - 2 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS CDS 19519 19654 0.92 - 0 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS CDS 19952 20124 0.78 - 2 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS CDS 20216 20237 0.64 - 0 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS CDS 20296 20463 0.98 - 0 transcript_id "g9.t1"; gene_id "g9"; 6_related_000073F_1 AUGUSTUS start_codon 20461 20463 . - 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MPIHHNKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLEKPVTLRMILTSSNILSSWLLP # MMLVYVSISFVTIYINSLFRTLSSGITSSIVLVLFIRITRRLLNRCSTPYPTTGSNKGSNKDEKSAVNEVSPRLSKVHCHTDSHVSSNLTHSKHINHA # LAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATCARIAKVIADKACSILKSRQDSGSDSSASDASFATAQSIPTTGSEDTVVTP # TENAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 6_related_000073F_1 AUGUSTUS gene 21535 22437 0.37 - . g10 6_related_000073F_1 AUGUSTUS transcript 21535 22437 0.37 - . g10.t1 6_related_000073F_1 AUGUSTUS stop_codon 21535 21537 . - 0 transcript_id "g10.t1"; gene_id "g10"; 6_related_000073F_1 AUGUSTUS CDS 21535 22047 0.62 - 0 transcript_id "g10.t1"; gene_id "g10"; 6_related_000073F_1 AUGUSTUS CDS 22310 22344 0.52 - 2 transcript_id "g10.t1"; gene_id "g10"; 6_related_000073F_1 AUGUSTUS CDS 22413 22437 0.38 - 0 transcript_id "g10.t1"; gene_id "g10"; 6_related_000073F_1 AUGUSTUS start_codon 22435 22437 . - 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MQDLLQINPFNSGSSLCFRLLDGLGALFDQARQSFLQSFLDLQQAGQDPIVVLEALKAAEPQRESISVEDWTLLATLF # QWSSPFNLNGLKFDNRTPAEWIDLLCSIHSGATSATVTVDGHLVDTSQPPEAAVEVSEALDPQGSPPITVVEKAAGVEDLASLSEGSPIQTELDLPQI # ESLTESTLAPEKGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 6_related_000073F_1 AUGUSTUS gene 26188 27174 0.99 - . g11 6_related_000073F_1 AUGUSTUS transcript 26188 27174 0.99 - . g11.t1 6_related_000073F_1 AUGUSTUS stop_codon 26188 26190 . - 0 transcript_id "g11.t1"; gene_id "g11"; 6_related_000073F_1 AUGUSTUS CDS 26188 27174 0.99 - 0 transcript_id "g11.t1"; gene_id "g11"; 6_related_000073F_1 AUGUSTUS start_codon 27172 27174 . - 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MSSAQDIRDAITELTKNQAKLQDVVSELVSGLSTTKSVGKPQNYNGKRGEDARRFLAAFELWANSIPALSTDRKKKIT # SAITYLEGDAAIWATPISETINRSSITGSGVPFPYDTWEEFVTAFKTRFETTDASADAKQLLKRLYQNRTMVGTYASTFQQYADCTGYSDKDLRDRFY # DHLADRVKDGLVFTTRPTGSLQELIEAAIDVDNRQITRAWEQGKKLVDDGILTNFRPTTVATPFTAPTRDPNAMDIDATTTRSPDAFRCFMIGQCYGC # GSKEHRKANGHHERDICRHCGLNGHVEAVCRRKFLGLPRRKATTISATSIPDTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g11 ### # start gene g12 6_related_000073F_1 AUGUSTUS gene 32214 33218 0.65 + . g12 6_related_000073F_1 AUGUSTUS transcript 32214 33218 0.65 + . g12.t1 6_related_000073F_1 AUGUSTUS start_codon 32214 32216 . + 0 transcript_id "g12.t1"; gene_id "g12"; 6_related_000073F_1 AUGUSTUS CDS 32214 33218 0.65 + 0 transcript_id "g12.t1"; gene_id "g12"; 6_related_000073F_1 AUGUSTUS stop_codon 33216 33218 . + 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MASHNQVHFQPQARPIHPSHLNSASDPELYSPSHSLTILNNDYDAFDALLHNIYEKTLQDNWFKPAGDTDSTGVCLRV # DPTSFRCFPYENPKLIPFEEGVRRLNVEVAVKIRSASVHAAVSRSPPTAREILIDSNTRIQILPDISALGDAEREQCAAFIRSDHTLVVWAFSVDQVI # PLWAEFEEKLIKYIWRTRSTPRRDSNTPGFFDPTGSPVMHTGSLPDLASTVTSAAPSTIALPQYSSTRLSTAAGPFGMEDVDRSAADTMVVDFGFGAA # DEQDQEEKVVQPKKVSKKPKKSSFWSFLSWWKLQPPAPAQSEKGMSIEYFNCASVMYIKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 6_related_000073F_1 AUGUSTUS gene 33975 34628 0.91 + . g13 6_related_000073F_1 AUGUSTUS transcript 33975 34628 0.91 + . g13.t1 6_related_000073F_1 AUGUSTUS start_codon 33975 33977 . + 0 transcript_id "g13.t1"; gene_id "g13"; 6_related_000073F_1 AUGUSTUS CDS 33975 34628 0.91 + 0 transcript_id "g13.t1"; gene_id "g13"; 6_related_000073F_1 AUGUSTUS stop_codon 34626 34628 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MVYTGISSHLLIAPSPYRLEFYANHNIGWVARPRHSSGPGGFKRAGKFKKASNMNYGLALSIAMEQQLAKLIGDASSA # NNTTLSSSEPRETTRPNTSASSPSTFSSQPHFESIESLEERALQLAIEQIYQESGTVKKVIDESGRETEEVVYHRPWAGGARSLRVGEIILIIDADTV # VPEDCFRDAAREMGEEGGEEVAIIQHESGEPNLQLWSSRSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 6_related_000073F_1 AUGUSTUS gene 37372 37698 0.55 - . g14 6_related_000073F_1 AUGUSTUS transcript 37372 37698 0.55 - . g14.t1 6_related_000073F_1 AUGUSTUS stop_codon 37372 37374 . - 0 transcript_id "g14.t1"; gene_id "g14"; 6_related_000073F_1 AUGUSTUS CDS 37372 37698 0.55 - 0 transcript_id "g14.t1"; gene_id "g14"; 6_related_000073F_1 AUGUSTUS start_codon 37696 37698 . - 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MNMHLAPHKFATTALAFHYDQLEASAFREEFNPHAFEDLTEPNVDLIHAVSDYLLSIDEFQLSGAQKAGKLLKEWKVE # LANDDSATLVIPVTGSKRKPACIPISQSRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 6_related_000073F_1 AUGUSTUS gene 44723 45136 0.87 + . g15 6_related_000073F_1 AUGUSTUS transcript 44723 45136 0.87 + . g15.t1 6_related_000073F_1 AUGUSTUS start_codon 44723 44725 . + 0 transcript_id "g15.t1"; gene_id "g15"; 6_related_000073F_1 AUGUSTUS CDS 44723 45136 0.87 + 0 transcript_id "g15.t1"; gene_id "g15"; 6_related_000073F_1 AUGUSTUS stop_codon 45134 45136 . + 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MQDRRRLGVEVVALISLARAKLVDRYTCRRHEKPMPQYGTPLVTVPALLAKANKELNLNVIGLASTFVVDVMLSVFGT # ATDAEFSFYLLDVSRWGFEACSRIHHSNKSASVLTDAIEEHFPDLRNINSDWGKFYIRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 6_related_000073F_1 AUGUSTUS gene 46375 48137 0.53 + . g16 6_related_000073F_1 AUGUSTUS transcript 46375 48137 0.53 + . g16.t1 6_related_000073F_1 AUGUSTUS start_codon 46375 46377 . + 0 transcript_id "g16.t1"; gene_id "g16"; 6_related_000073F_1 AUGUSTUS CDS 46375 46432 0.57 + 0 transcript_id "g16.t1"; gene_id "g16"; 6_related_000073F_1 AUGUSTUS CDS 46479 46503 0.95 + 2 transcript_id "g16.t1"; gene_id "g16"; 6_related_000073F_1 AUGUSTUS CDS 47483 48137 0.86 + 1 transcript_id "g16.t1"; gene_id "g16"; 6_related_000073F_1 AUGUSTUS stop_codon 48135 48137 . + 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MRSRGYTSVSGNRVSRGRGRFLATCYACPSSPNFPSTCLSPTQPGYGQVVASAPGRRRAPRKSSLPNVSTTTNSAWSV # VTPHTTDASFEPHPGALPPSAYTSYPPQYIPFNAHSEDFQQEILPTSDRHSLSLPPSTQRDRAYSRFAPYPDPSPPPTFRLPARENPIALHIPSTDFT # KHNSHNISLPPISPAASNRYGPSSAYALPPISALEDLRGVDVNDSAAVLRRLSQNDEADIWPSRSTNNK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 6_related_000073F_1 AUGUSTUS gene 51747 52147 0.62 - . g17 6_related_000073F_1 AUGUSTUS transcript 51747 52147 0.62 - . g17.t1 6_related_000073F_1 AUGUSTUS stop_codon 51747 51749 . - 0 transcript_id "g17.t1"; gene_id "g17"; 6_related_000073F_1 AUGUSTUS CDS 51747 52048 0.63 - 2 transcript_id "g17.t1"; gene_id "g17"; 6_related_000073F_1 AUGUSTUS CDS 52132 52147 0.62 - 0 transcript_id "g17.t1"; gene_id "g17"; 6_related_000073F_1 AUGUSTUS start_codon 52145 52147 . - 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MTISKIGRPSDVATDSIFIPLLDKELKKVALFYENQEKELFDELAELEALVQNQDELGLDGDHYADDDEYDEEDDESL # SRSPERHRRRRLSSSVNVNRGTSGPGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g17 ### # start gene g18 6_related_000073F_1 AUGUSTUS gene 56799 58490 0.99 + . g18 6_related_000073F_1 AUGUSTUS transcript 56799 58490 0.99 + . g18.t1 6_related_000073F_1 AUGUSTUS start_codon 56799 56801 . + 0 transcript_id "g18.t1"; gene_id "g18"; 6_related_000073F_1 AUGUSTUS CDS 56799 58490 0.99 + 0 transcript_id "g18.t1"; gene_id "g18"; 6_related_000073F_1 AUGUSTUS stop_codon 58488 58490 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPDGPGGPGGPGGPGGPGGPRSPNSPDIPNEQRAMLDLLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFTALVKELQDNFGVYDAQGEAEDALGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLAAYRLEVLRIDNRYWKREETKKREAGKPFIARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFS # GGKPNNNGKPQNSANSGQSGGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 6_related_000073F_1 AUGUSTUS gene 58823 62386 0.99 + . g19 6_related_000073F_1 AUGUSTUS transcript 58823 62386 0.99 + . g19.t1 6_related_000073F_1 AUGUSTUS start_codon 58823 58825 . + 0 transcript_id "g19.t1"; gene_id "g19"; 6_related_000073F_1 AUGUSTUS CDS 58823 62386 0.99 + 0 transcript_id "g19.t1"; gene_id "g19"; 6_related_000073F_1 AUGUSTUS stop_codon 62384 62386 . + 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHPDSPQTSVPSAINPVAAKVAV # PLPEPSPSVSPTILETPPGDSLRPRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKTAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPALRASIIMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEK # FSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHISQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 6_related_000073F_1 AUGUSTUS gene 64776 65804 0.39 + . g20 6_related_000073F_1 AUGUSTUS transcript 64776 65804 0.39 + . g20.t1 6_related_000073F_1 AUGUSTUS start_codon 64776 64778 . + 0 transcript_id "g20.t1"; gene_id "g20"; 6_related_000073F_1 AUGUSTUS CDS 64776 65804 0.39 + 0 transcript_id "g20.t1"; gene_id "g20"; 6_related_000073F_1 AUGUSTUS stop_codon 65802 65804 . + 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MIFSPSHSMHSHPSLNSQMNHSTVPSLSLFPSVPTIPQSISETWHNHNIPTSTQNFAPQNMFHYRPLPVAPVQSSNTF # MNDTTTPLGSPVFSPLHYIQLPVSVPPASVRLPSRLCSRMTVHPNINRTPSRIMHQPRPHRIVDLDHLSASAHLLPEIQSALAIMSEFHCEHYPMLPR # QLEVPHSPTQWVAVPPRAPENHPYPMYYTPYPVYQAFPPPDQPRSMTPRFKIEYSSIHATFLAMIKDADSLKDRKSWVKWNEGVWQAVADGFVIGHIC # DEPQPGIPRTEWNTPSLRPAISSNPTRKELETQLKWDKNNRWTSSILTAQLSDEARNHLPPMIDDHGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 6_related_000073F_1 AUGUSTUS gene 65916 67400 0.29 + . g21 6_related_000073F_1 AUGUSTUS transcript 65916 67400 0.29 + . g21.t1 6_related_000073F_1 AUGUSTUS start_codon 65916 65918 . + 0 transcript_id "g21.t1"; gene_id "g21"; 6_related_000073F_1 AUGUSTUS CDS 65916 67400 0.29 + 0 transcript_id "g21.t1"; gene_id "g21"; 6_related_000073F_1 AUGUSTUS stop_codon 67398 67400 . + 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MDIEKFNLKWSLTLTTLHNYGYDIPWDTLISKYISKLPSGPRYLYLKQMLEEDFDQPGVIPGRDLFDKFAIRLENTRN # RELLNLADSGGSSYSRRFQCNANGGTPDKQLPDSQKPKDPQNTQKPNNKPSAYVTTTNISTLNSTSKIEPMDTVNHVPNATSNTNTTVHSTYPARRLK # PFAALLSSFPNSSLPNSPIQVDEPLTCSTIILKLQTLLDSACTNHIINDQRFFFTFNVDGALAVQMANLGILTTKGSGTCYFKMRLEGTDENLVLEMH # DCLYAPEAPVNLLSVRAMLEHGFMFTMSPQTVEIHPDPDHYAIADVTHWLCVLRGKFLLPNEDPLDPIHLAMPVFIPRIPNGALFHERFGHPGIDLTN # ELLTGNSATGLEDWNGTKMQGICDSCLKGKHPRFSYPYHGNRASAPLELLHTDTCSPIGTLSNHQNSHFNIVLNDHTSALSVTSLPRFCVKEKGRNLM # CTPTNQSNTQYASSLLSNLFNSKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 6_related_000073F_1 AUGUSTUS gene 70458 72644 0.41 - . g22 6_related_000073F_1 AUGUSTUS transcript 70458 72644 0.41 - . g22.t1 6_related_000073F_1 AUGUSTUS stop_codon 70458 70460 . - 0 transcript_id "g22.t1"; gene_id "g22"; 6_related_000073F_1 AUGUSTUS CDS 70458 72644 0.41 - 0 transcript_id "g22.t1"; gene_id "g22"; 6_related_000073F_1 AUGUSTUS start_codon 72642 72644 . - 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIAQPLNDLTKKDTSFTWTDTRQKAFDILREAFISAPIL # ALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPRPFDIITDHSNLEFWRTAQDLTR # RQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLAN # GIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLW # EEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFHLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSN # GQTERANQEVEKYICLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQK # EGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDE # DEPEYEVEEILDSRVRWKKLEYLVKWKGYDTGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 6_related_000073F_1 AUGUSTUS gene 72717 74174 0.5 - . g23 6_related_000073F_1 AUGUSTUS transcript 72717 74174 0.5 - . g23.t1 6_related_000073F_1 AUGUSTUS stop_codon 72717 72719 . - 0 transcript_id "g23.t1"; gene_id "g23"; 6_related_000073F_1 AUGUSTUS CDS 72717 74174 0.5 - 0 transcript_id "g23.t1"; gene_id "g23"; 6_related_000073F_1 AUGUSTUS start_codon 74172 74174 . - 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANQDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHQRM # VREVLTRLEKHDLYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g23 ### # start gene g24 6_related_000073F_1 AUGUSTUS gene 74225 75391 0.94 - . g24 6_related_000073F_1 AUGUSTUS transcript 74225 75391 0.94 - . g24.t1 6_related_000073F_1 AUGUSTUS stop_codon 74225 74227 . - 0 transcript_id "g24.t1"; gene_id "g24"; 6_related_000073F_1 AUGUSTUS CDS 74225 75391 0.94 - 0 transcript_id "g24.t1"; gene_id "g24"; 6_related_000073F_1 AUGUSTUS start_codon 75389 75391 . - 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MSTPIPPAPNTSADDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSVPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 6_related_000073F_1 AUGUSTUS gene 78826 79302 0.59 + . g25 6_related_000073F_1 AUGUSTUS transcript 78826 79302 0.59 + . g25.t1 6_related_000073F_1 AUGUSTUS start_codon 78826 78828 . + 0 transcript_id "g25.t1"; gene_id "g25"; 6_related_000073F_1 AUGUSTUS CDS 78826 79302 0.59 + 0 transcript_id "g25.t1"; gene_id "g25"; 6_related_000073F_1 AUGUSTUS stop_codon 79300 79302 . + 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MALSDADWGSNSIDCKSASGFGIFMFGGLVAWSASKQKSIALSSTEAEYMGLTHVLKELLWIRVFTSLISLPILNPFP # LISDNCSSIDIANSRSVSNRSKHIDIHYHFIWSHIKDDSISTIWCSSLDMIADIFTKSLPTDLHYKHSLSLGLVPLPLVT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 6_related_000073F_1 AUGUSTUS gene 84641 85051 1 - . g26 6_related_000073F_1 AUGUSTUS transcript 84641 85051 1 - . g26.t1 6_related_000073F_1 AUGUSTUS stop_codon 84641 84643 . - 0 transcript_id "g26.t1"; gene_id "g26"; 6_related_000073F_1 AUGUSTUS CDS 84641 85051 1 - 0 transcript_id "g26.t1"; gene_id "g26"; 6_related_000073F_1 AUGUSTUS start_codon 85049 85051 . - 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MALAFADVLELSNKQQRAYEVYVHALELLQQDGVKVMLTGPERLRAVAISSKLGELAKDLKKHKTEEEKWLVWAVEEL # LRIVKSPSKDDAGENVDYSHQGSFNLPLLALPSWISKTDIGAPLEALGSFYAEAGRLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g26 ### # start gene g27 6_related_000073F_1 AUGUSTUS gene 85706 87102 0.12 + . g27 6_related_000073F_1 AUGUSTUS transcript 85706 87102 0.12 + . g27.t1 6_related_000073F_1 AUGUSTUS start_codon 85706 85708 . + 0 transcript_id "g27.t1"; gene_id "g27"; 6_related_000073F_1 AUGUSTUS CDS 85706 85830 0.51 + 0 transcript_id "g27.t1"; gene_id "g27"; 6_related_000073F_1 AUGUSTUS CDS 85909 86488 0.25 + 1 transcript_id "g27.t1"; gene_id "g27"; 6_related_000073F_1 AUGUSTUS CDS 86545 87102 0.62 + 0 transcript_id "g27.t1"; gene_id "g27"; 6_related_000073F_1 AUGUSTUS stop_codon 87100 87102 . + 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MRPRVAFVLMVSFAFSFAQNATELKLQLAAGNVEALFQDDAGQSTIHRRTYRDRLSRKRGTDLNSGQSRCQPNPEGSC # AKRWCASFSNLYNVLFSINSIAFQHSYIANGLGGTNGSLVVDLSQMKNITVDTVTGNAIIEPGNRLGDVALVLNDAGRGLPHGRCTYVGIGGHSGKCH # SFWGPGVTTLTSRFSGFGGWGFASRMWGMTLDNVLSATVVLANGSIVTASEDSNPELYWGIRGSSASFGIVASLEFRTYAVPSSATAFEFIWEMDIPT # ASNAFMEFQSWALSGNVPLEFGGEIGFLKGLAYGQVQFAFLGNYFGPADSFNSTIAPFFDKLPIPNTTNVTQGTWIEALTAIAAGNMNTTVLPDTNDT # FYAKSLMAPQLSPLTNASMIALVTYLAEVGFNNSDVCLFLLRLAMQSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g27 ### # start gene g28 6_related_000073F_1 AUGUSTUS gene 89084 90352 0.99 - . g28 6_related_000073F_1 AUGUSTUS transcript 89084 90352 0.99 - . g28.t1 6_related_000073F_1 AUGUSTUS stop_codon 89084 89086 . - 0 transcript_id "g28.t1"; gene_id "g28"; 6_related_000073F_1 AUGUSTUS CDS 89084 90352 0.99 - 0 transcript_id "g28.t1"; gene_id "g28"; 6_related_000073F_1 AUGUSTUS start_codon 90350 90352 . - 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MDFSFDSVVTEASTHPLFDYTSVGSSSKLQAKPDATEVDVSSFRNDGFSDFTLDLTCLSNPSSPVSSPPTPLASDNGH # NILPVPSPSSPLLPQMQESPRTSTETPATPPKANSITRATSMMRMSLPAMRYIGRGTPIDPGRRSQWGGRKSEDVTEDGMLFSEIHAHSLDSHNYPHR # RSISSDWQAVSEHRALSPLHMDIDSALENHTPIFLEPLPESSKIQIQVDSDPTEWESVMKTVLGSSGTSSSSRSRTGDGGTSSSRRSSQGPIPGLPQH # PNGFDIVLGLNSALDLGLGLGKGMNFFDLGLIPDTGRDTPSVYSLAPESPDHTRPPSAEKASQELDLMENELPEHRPPQKEEQKELQRQEQHSSEDGG # SGTTTAETRAPVAVPFEPKAMRDVHRMHWWQKTIFKLRKVQKLLKAPSRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 6_related_000073F_1 AUGUSTUS gene 99029 99814 0.81 - . g29 6_related_000073F_1 AUGUSTUS transcript 99029 99814 0.81 - . g29.t1 6_related_000073F_1 AUGUSTUS stop_codon 99029 99031 . - 0 transcript_id "g29.t1"; gene_id "g29"; 6_related_000073F_1 AUGUSTUS CDS 99029 99814 0.81 - 0 transcript_id "g29.t1"; gene_id "g29"; 6_related_000073F_1 AUGUSTUS start_codon 99812 99814 . - 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MSSSRSNAMARSHYSTFDRTSGYRQTVPLSFYPGLSGSIPASRFYHDDNDEPDSRSVVERVVLANENAINSIADLWVA # AALNVEGNDDDGTHIDTSHNIFEFEDGFHVDVHSHRGRSDHPSHLYSTTKSPSRRRSSRRPSTTRPMDASLSVYQSAGGTSTPRQFPSIFTNSGVSTP # HDVFENPACNSETDLTTNLERELPPILESRQPSAMHLNEGETAALLDAGISSPSAPLPWLVITQFGLLALHTTTHDQIFMSYLVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g29 ### # start gene g30 6_related_000073F_1 AUGUSTUS gene 101979 102682 0.21 - . g30 6_related_000073F_1 AUGUSTUS transcript 101979 102682 0.21 - . g30.t1 6_related_000073F_1 AUGUSTUS stop_codon 101979 101981 . - 0 transcript_id "g30.t1"; gene_id "g30"; 6_related_000073F_1 AUGUSTUS CDS 101979 102434 0.97 - 0 transcript_id "g30.t1"; gene_id "g30"; 6_related_000073F_1 AUGUSTUS CDS 102533 102682 0.21 - 0 transcript_id "g30.t1"; gene_id "g30"; 6_related_000073F_1 AUGUSTUS start_codon 102680 102682 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MVVRARAIVPVNATKDEIPPPLAAVSTDAVLTSYHAMKDLRAGETVLVMGNLKRAQTVIAVDLRDEMLQEALEVGADY # AVKPEDLGPLLYSHNLNVDTAYDFVGIGPTFKSVLEHIRPRGTIIIVGLGATCLELPLVPVTRKEVTIKTSMWGTKKELEEVLAILKDKEVRPVIETR # PLVQALEAFEDLRNSKLKGRVVLVP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 6_related_000073F_1 AUGUSTUS gene 105301 105771 0.55 + . g31 6_related_000073F_1 AUGUSTUS transcript 105301 105771 0.55 + . g31.t1 6_related_000073F_1 AUGUSTUS start_codon 105301 105303 . + 0 transcript_id "g31.t1"; gene_id "g31"; 6_related_000073F_1 AUGUSTUS CDS 105301 105771 0.55 + 0 transcript_id "g31.t1"; gene_id "g31"; 6_related_000073F_1 AUGUSTUS stop_codon 105769 105771 . + 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MVSGGFLTPGSSPARARYSIEELCVIAEVAHAHGIPVTTHATGVEGIERAIDAGFDCIEHCSWSVGNDLTSILSWSLL # KISCAEGGTKFDEEIAKKLVAQNVAVCPTMNTACMEKDYFCPWDTRETVLKNLTSLREHGVQIVVGTDNGIGKYDVSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 6_related_000073F_1 AUGUSTUS gene 106616 106936 0.48 - . g32 6_related_000073F_1 AUGUSTUS transcript 106616 106936 0.48 - . g32.t1 6_related_000073F_1 AUGUSTUS stop_codon 106616 106618 . - 0 transcript_id "g32.t1"; gene_id "g32"; 6_related_000073F_1 AUGUSTUS CDS 106616 106936 0.48 - 0 transcript_id "g32.t1"; gene_id "g32"; 6_related_000073F_1 AUGUSTUS start_codon 106934 106936 . - 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MFKLDFPSSSFGSPVPFYLEKGGRIDYVLDAFTRNAEDRINDGDIDESYEHEEHWINLVKYANDEKFSLVREKIGLDP # SKRWGPYFDCCREDDIDSEDGGSLDFLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 6_related_000073F_1 AUGUSTUS gene 108839 110289 0.46 - . g33 6_related_000073F_1 AUGUSTUS transcript 108839 110289 0.46 - . g33.t1 6_related_000073F_1 AUGUSTUS stop_codon 108839 108841 . - 0 transcript_id "g33.t1"; gene_id "g33"; 6_related_000073F_1 AUGUSTUS CDS 108839 109666 0.7 - 0 transcript_id "g33.t1"; gene_id "g33"; 6_related_000073F_1 AUGUSTUS CDS 109759 110289 0.63 - 0 transcript_id "g33.t1"; gene_id "g33"; 6_related_000073F_1 AUGUSTUS start_codon 110287 110289 . - 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MGYPSQYYSASQYGNTATNSNYLPQVDVGQSQHWTQSMPPQSIQDSNYESSPGQARIYYRDQYQYRSDTAGTYHSSSS # SSGHNSYESLPDASSVETSRRQETIENVRRRYNIPDGIPVNLNAIPDPPLGQKPSEKHAKLVHLAIAGSPNLRLSLREIYHAIEERFPYYKNLADKKW # QAEFISTPRPITEPGQGQYWSLNMNMTGDKRVRKRRSRPRHRAESTDSQNEDEAEPDPASPSAESQDSMSSRGGARSSPNITSTTFRHQNRTSPYIAN # DVNLPRPNSRASTSRFRETLRRSDSESNLLTNVESLNIRSTARAIYPQTYMGPPPVQAPYRGTWSSQHSHHAIPPREPAIGYNYPNPPYYSSLPSPVI # QRPSFPMPAMNSYPPIPSAPTRGLMSGPETSSTSGSSSGRMVASQAARPIFIPRAEGSSDSSSDASRSASANAQGKSRAN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 6_related_000073F_1 AUGUSTUS gene 112099 112847 0.99 - . g34 6_related_000073F_1 AUGUSTUS transcript 112099 112847 0.99 - . g34.t1 6_related_000073F_1 AUGUSTUS stop_codon 112099 112101 . - 0 transcript_id "g34.t1"; gene_id "g34"; 6_related_000073F_1 AUGUSTUS CDS 112099 112284 1 - 0 transcript_id "g34.t1"; gene_id "g34"; 6_related_000073F_1 AUGUSTUS CDS 112383 112847 0.99 - 0 transcript_id "g34.t1"; gene_id "g34"; 6_related_000073F_1 AUGUSTUS start_codon 112845 112847 . - 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MSASSPYSDYFRRRTIGRAASPPTWACYEQIPYDEDYSDSDSEPCSEDDEDYHNASADNEHMNDLEHEQAGHRLPADD # SNDLDMDIDEGTDKIEGIEKETSTEPQKDAKGKQKAIEAEVEAEPPKRHHRRRQRHNTYTLRPILTIQRSQGFVWNQVSSLSDASSNKYPSDVASTSP # PNSSGFISTSVSSTNSALTDYEIEVVEIRVQEGDLEHIIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 6_related_000073F_1 AUGUSTUS gene 138559 139158 0.66 + . g35 6_related_000073F_1 AUGUSTUS transcript 138559 139158 0.66 + . g35.t1 6_related_000073F_1 AUGUSTUS start_codon 138559 138561 . + 0 transcript_id "g35.t1"; gene_id "g35"; 6_related_000073F_1 AUGUSTUS CDS 138559 138606 0.67 + 0 transcript_id "g35.t1"; gene_id "g35"; 6_related_000073F_1 AUGUSTUS CDS 138682 139158 0.98 + 0 transcript_id "g35.t1"; gene_id "g35"; 6_related_000073F_1 AUGUSTUS stop_codon 139156 139158 . + 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MLGFIFHRSTQKYLWITELLDTFQTRPHSTSSAASDELGIPVTAPPTPFPTQEIGFRNVAFSWSNDYSGNSDEYQSDL # STPTSTRSKPFERSISSSVAPTSQSPRSIKCQFTLKIPDEIIFQRNTVNLIVGSTGSGKTSLLMTLLGEVHFTPQGSGLHQSWFNLPRGRGVAYAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g35 ### # start gene g36 6_related_000073F_1 AUGUSTUS gene 143121 143522 0.52 + . g36 6_related_000073F_1 AUGUSTUS transcript 143121 143522 0.52 + . g36.t1 6_related_000073F_1 AUGUSTUS start_codon 143121 143123 . + 0 transcript_id "g36.t1"; gene_id "g36"; 6_related_000073F_1 AUGUSTUS CDS 143121 143522 0.52 + 0 transcript_id "g36.t1"; gene_id "g36"; 6_related_000073F_1 AUGUSTUS stop_codon 143520 143522 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MHARYSFKKLTALTRLPQHPLPEESPHADHAGSDSDRFPASPLSNSILSLDVPLESTTCLADSVKSTSGTSLAFAPDV # EMVEPGDYQGTAEPMREMGDETVAERGDDEGFGGIGDLSEGTSTVQPASSMIAQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 6_related_000073F_1 AUGUSTUS gene 157005 157567 0.35 + . g37 6_related_000073F_1 AUGUSTUS transcript 157005 157567 0.35 + . g37.t1 6_related_000073F_1 AUGUSTUS start_codon 157005 157007 . + 0 transcript_id "g37.t1"; gene_id "g37"; 6_related_000073F_1 AUGUSTUS CDS 157005 157179 0.35 + 0 transcript_id "g37.t1"; gene_id "g37"; 6_related_000073F_1 AUGUSTUS CDS 157257 157567 1 + 2 transcript_id "g37.t1"; gene_id "g37"; 6_related_000073F_1 AUGUSTUS stop_codon 157565 157567 . + 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MKHSTTTTGELLSEQDKRNLAATDEKAAGCSTLPRLTPGISEHTHIVSTSPHNDRQQRLIHETTETTETTETTETTET # TETTETTETNETTETNETNETNETNETNETNETNETNETNETNETNETNETNETNVTYLPDTSSLFAPESYLLGTSSLFAPES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 6_related_000073F_1 AUGUSTUS gene 158193 158678 0.6 - . g38 6_related_000073F_1 AUGUSTUS transcript 158193 158678 0.6 - . g38.t1 6_related_000073F_1 AUGUSTUS stop_codon 158193 158195 . - 0 transcript_id "g38.t1"; gene_id "g38"; 6_related_000073F_1 AUGUSTUS CDS 158193 158678 0.6 - 0 transcript_id "g38.t1"; gene_id "g38"; 6_related_000073F_1 AUGUSTUS start_codon 158676 158678 . - 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MMTYVVKSKCFDVFNDIFLTLLLNYNRTFRFLDDDSIQKEEKRDSYYHFKSGYQPRYTKYETDVLQEARLANEKADME # AQFKHSAHAELSRAVSHPIPTSADNWLLDPRFKLSLGFLEFHVIIRRGPYASDPPEDIPVYLAYNIDNELQVYLRTGRNNLTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # # ----- prediction on sequence number 2 (length = 93581, name = 6_related_000123F) ----- # # Predicted genes for sequence number 2 on both strands # start gene g39 6_related_000123F AUGUSTUS gene 4051 4479 0.92 - . g39 6_related_000123F AUGUSTUS transcript 4051 4479 0.92 - . g39.t1 6_related_000123F AUGUSTUS stop_codon 4051 4053 . - 0 transcript_id "g39.t1"; gene_id "g39"; 6_related_000123F AUGUSTUS CDS 4051 4479 0.92 - 0 transcript_id "g39.t1"; gene_id "g39"; 6_related_000123F AUGUSTUS start_codon 4477 4479 . - 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPP # INNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPGSQRKNNSRWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 6_related_000123F AUGUSTUS gene 8273 8845 0.41 + . g40 6_related_000123F AUGUSTUS transcript 8273 8845 0.41 + . g40.t1 6_related_000123F AUGUSTUS start_codon 8273 8275 . + 0 transcript_id "g40.t1"; gene_id "g40"; 6_related_000123F AUGUSTUS CDS 8273 8845 0.41 + 0 transcript_id "g40.t1"; gene_id "g40"; 6_related_000123F AUGUSTUS stop_codon 8843 8845 . + 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MLEGIFVGYEDNHVGWRIHGTNGKDYFSDQVVFNESKFGQLRGPHSPKSTMTTLHPISPQPNPPIQATEPVLNTPKGP # RPRRTTKLMEHGKEWCEGIQRHDELLQERRINNSLPPTHDPQVNTDIIGCSLACHILKDDFDCIDDDSEFFFAALANIPIPFVPMKPHSTSTSKLRTF # DLKKAPLTQREMLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 6_related_000123F AUGUSTUS gene 12327 12875 0.99 + . g41 6_related_000123F AUGUSTUS transcript 12327 12875 0.99 + . g41.t1 6_related_000123F AUGUSTUS start_codon 12327 12329 . + 0 transcript_id "g41.t1"; gene_id "g41"; 6_related_000123F AUGUSTUS CDS 12327 12875 0.99 + 0 transcript_id "g41.t1"; gene_id "g41"; 6_related_000123F AUGUSTUS stop_codon 12873 12875 . + 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MSRQSTLSSAGTLRQGTPNKTRPELVNEILEPTDTDNTPTVMATKEQIAREYLTSKAAIIGSNALLTKEDIYDAMLRA # TRLPKKDLDVTLKTVEHGITLLRDIDEKQNQHQILGEIKGAVESSFAKLDIEKQLQHQLTQVRNEFNKRLDSITANINGTEEKIDSIAKNSQPVAPSA # SYADVT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 6_related_000123F AUGUSTUS gene 16468 17937 0.98 - . g42 6_related_000123F AUGUSTUS transcript 16468 17937 0.98 - . g42.t1 6_related_000123F AUGUSTUS stop_codon 16468 16470 . - 0 transcript_id "g42.t1"; gene_id "g42"; 6_related_000123F AUGUSTUS CDS 16468 17937 0.98 - 0 transcript_id "g42.t1"; gene_id "g42"; 6_related_000123F AUGUSTUS start_codon 17935 17937 . - 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MDIEALHQAIILALPADPSSVVGLELAKDPSNERWSVGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDHPLSGHFGQNR # TLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHWPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLA # ELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWLPLLPIAEFAYNNAPNASTGI # TPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVI # SRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAKILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADEL # HADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 6_related_000123F AUGUSTUS gene 18124 20031 0.97 - . g43 6_related_000123F AUGUSTUS transcript 18124 20031 0.97 - . g43.t1 6_related_000123F AUGUSTUS stop_codon 18124 18126 . - 0 transcript_id "g43.t1"; gene_id "g43"; 6_related_000123F AUGUSTUS CDS 18124 20031 0.97 - 0 transcript_id "g43.t1"; gene_id "g43"; 6_related_000123F AUGUSTUS start_codon 20029 20031 . - 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHFDSPQTSVPSAINTVDATVAV # PLPELSPSVSPTILETPPGDSPRSRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYTEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGHIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPDKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGAPWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYTIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g43 ### # start gene g44 6_related_000123F AUGUSTUS gene 20364 22055 1 - . g44 6_related_000123F AUGUSTUS transcript 20364 22055 1 - . g44.t1 6_related_000123F AUGUSTUS stop_codon 20364 20366 . - 0 transcript_id "g44.t1"; gene_id "g44"; 6_related_000123F AUGUSTUS CDS 20364 22055 1 - 0 transcript_id "g44.t1"; gene_id "g44"; 6_related_000123F AUGUSTUS start_codon 22053 22055 . - 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGANNNHDDLDDDSGGLPRGEPG # DPSGPGGPGGPGGPGSPGGPGGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGGPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNIALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKHEETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFS # GGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEDSEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 6_related_000123F AUGUSTUS gene 24990 25934 0.75 - . g45 6_related_000123F AUGUSTUS transcript 24990 25934 0.75 - . g45.t1 6_related_000123F AUGUSTUS stop_codon 24990 24992 . - 0 transcript_id "g45.t1"; gene_id "g45"; 6_related_000123F AUGUSTUS CDS 24990 25934 0.75 - 0 transcript_id "g45.t1"; gene_id "g45"; 6_related_000123F AUGUSTUS start_codon 25932 25934 . - 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MDIKALHQAIILTLPKDPSSVVGLELAKDPSNGCWSLGSDGLLRLDDHIYVPNHRDLRLQVLRYFHDHPLSGHFGQNR # TLEVVCCQYTWSKVRDFVRDYVTSCTTCGHNKPRCHRPYGLLKPLPVPVRPWDSISMDFIDQLPMSNGYTAILVVVDRSSKQAIFIPTFDTITSEQLA # ELFVIHVFSKHGVSNHVTSDRGSEFVLAFFRALGKALSMELHYTSGYHPEANGQTERVNQTLEQYIRIYCSYQQDDWSHLLLITEFAYNNAPNASTGI # TPFFANKGYHPNITVRPEVDMKSDLARDFVINLDELHVFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 6_related_000123F AUGUSTUS gene 26132 27724 0.48 - . g46 6_related_000123F AUGUSTUS transcript 26132 27724 0.48 - . g46.t1 6_related_000123F AUGUSTUS stop_codon 26132 26134 . - 0 transcript_id "g46.t1"; gene_id "g46"; 6_related_000123F AUGUSTUS CDS 26132 27298 0.99 - 0 transcript_id "g46.t1"; gene_id "g46"; 6_related_000123F AUGUSTUS CDS 27467 27724 0.48 - 0 transcript_id "g46.t1"; gene_id "g46"; 6_related_000123F AUGUSTUS start_codon 27722 27724 . - 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHSDSSCKAVLGYSFLSHYNPLIDWASRNITFHNTSHFDSPQTSVPSATNTVDAKVAV # LLPKPLPSKLVALKDFIDKQLATGAITQSSSPHGAPVLFIPKKDGKLWLCMDFCGLNRITKKDCYPLLLISDLLDAPKRVKIYTKLDLAHAYHLVRIA # EDDEWKTTFRTRYGSHKWKVMPFGLTNTPAAFQHFVNDIFSDMLDVCVIIYLDDILIYSDRPEEHREHVKEVLRHLQKHRLYDNPDKCEFNMDTVEYL # GYILSPDRLTMSKEKVQTILEWPVPRKVQDIQSFLGFANFYRCFIYNYSDIVVPMTQLTRKGAPWIWDNNCQEAFENLKISFTSAPILAHWEPNRPII # METDASNYAIAAILPIQTVDGEIHPLAFLSRVFTLRSSTTTLTTKSSLPSLKLLKLGVIIWKVPAIRWTSSPITKILSISLLPRFSPVDRSVGQSIST # NSTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 6_related_000123F AUGUSTUS gene 28014 28556 0.5 - . g47 6_related_000123F AUGUSTUS transcript 28014 28556 0.5 - . g47.t1 6_related_000123F AUGUSTUS stop_codon 28014 28016 . - 0 transcript_id "g47.t1"; gene_id "g47"; 6_related_000123F AUGUSTUS CDS 28014 28556 0.5 - 0 transcript_id "g47.t1"; gene_id "g47"; 6_related_000123F AUGUSTUS start_codon 28554 28556 . - 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MARLPEPVTLTDYCQEVLCIDNRYWKREETRKHKAGKPFIARNPKKGSSDFKAGSSNQQNNSQPFGSSAPFMPKPKPF # SGGKPNNGKPQNSLNSGQSGGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGGKHHIADCNKQKAVLLKLKKPPKQRQLLLKRNQKTSPQLLFPGTK # QELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 6_related_000123F AUGUSTUS gene 28930 29734 0.73 - . g48 6_related_000123F AUGUSTUS transcript 28930 29734 0.73 - . g48.t1 6_related_000123F AUGUSTUS stop_codon 28930 28932 . - 0 transcript_id "g48.t1"; gene_id "g48"; 6_related_000123F AUGUSTUS CDS 28930 29616 0.88 - 0 transcript_id "g48.t1"; gene_id "g48"; 6_related_000123F AUGUSTUS CDS 29720 29734 0.81 - 0 transcript_id "g48.t1"; gene_id "g48"; 6_related_000123F AUGUSTUS start_codon 29732 29734 . - 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MKRFHVGNTAHIILALFAPFSESISAIGQPRRRNRSFGPATVPTTSTLAEAIEEQQFEYSSLYTSDGQPVQVLTPCRG # QPPVVAPAWGRSTTRIESPILQAIARCTGKQPQCCATSECPRDLPPHFNLDAGDHNDQDPPVNPNNLGANNDNNDGLDDDSGGLPRGEPGDPSGPRSP # ISPDIPNKQCAMLELLSGFKGSIETLGTVLAALGQPSDNTESKSKVKEPEVFDGSDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 6_related_000123F AUGUSTUS gene 44735 45595 0.99 - . g49 6_related_000123F AUGUSTUS transcript 44735 45595 0.99 - . g49.t1 6_related_000123F AUGUSTUS stop_codon 44735 44737 . - 0 transcript_id "g49.t1"; gene_id "g49"; 6_related_000123F AUGUSTUS CDS 44735 45595 0.99 - 0 transcript_id "g49.t1"; gene_id "g49"; 6_related_000123F AUGUSTUS start_codon 45593 45595 . - 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MLIQPIPITPTFTSFTPTFIGSPTALIAIARTSRDGDGYRHKYRYGYGNGDGDRYWDAVVPQPIELPRLLVFGDGMEV # DDVVDDAGDGDGDGDVDVDEDIDEDSDSESTTSTTSHISDISSMTSVSSSSSIAKSSPAAAGVVYVPPPMRMYKLSTESTTKSSPESGLDSESEFEYE # SSIPSHRLLSRSRSQHSSKSYPIPKSQSKSSTHVNRYKYQGGETGVMTGGVMLGSTTRSPFTPTRPTLTSTRTRSPLARHTKRGTTRTLILGPDSSSL # DWRRPRVPGLLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 6_related_000123F AUGUSTUS gene 48411 49151 0.88 - . g50 6_related_000123F AUGUSTUS transcript 48411 49151 0.88 - . g50.t1 6_related_000123F AUGUSTUS stop_codon 48411 48413 . - 0 transcript_id "g50.t1"; gene_id "g50"; 6_related_000123F AUGUSTUS CDS 48411 49151 0.88 - 0 transcript_id "g50.t1"; gene_id "g50"; 6_related_000123F AUGUSTUS start_codon 49149 49151 . - 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MAEVWLQEIKCGIKDHYTLISVRGSSGGQYRTFRTDFQGSFSSFSSTTQTIPTGDYFASHGIITVIINYRLVPDVTYP # GGAEDIQRAREWVYHNISKAEFGVGDPDKVVLVGHSAGGLHLATNLYLYPPEPKPKPKPKPQKYPVQPESFKEISTSSHPPPPPPPPIAGIVFISTPF # EFVDTDTFSPMPPHNTQFQTALKAYYGTQHLDEVHELSPIGLMMEKVPDGSPLLDPRKLPCLVVLAQYDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g50 ### # start gene g51 6_related_000123F AUGUSTUS gene 52311 54002 0.97 + . g51 6_related_000123F AUGUSTUS transcript 52311 54002 0.97 + . g51.t1 6_related_000123F AUGUSTUS start_codon 52311 52313 . + 0 transcript_id "g51.t1"; gene_id "g51"; 6_related_000123F AUGUSTUS CDS 52311 54002 0.97 + 0 transcript_id "g51.t1"; gene_id "g51"; 6_related_000123F AUGUSTUS stop_codon 54000 54002 . + 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEDQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRATSESPRDPPPHFNLDTGDHEDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPGGPGGPGGPGGPGGPGGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSTPFTPKPKPFS # GGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 6_related_000123F AUGUSTUS gene 54335 57898 0.97 + . g52 6_related_000123F AUGUSTUS transcript 54335 57898 0.97 + . g52.t1 6_related_000123F AUGUSTUS start_codon 54335 54337 . + 0 transcript_id "g52.t1"; gene_id "g52"; 6_related_000123F AUGUSTUS CDS 54335 57898 0.97 + 0 transcript_id "g52.t1"; gene_id "g52"; 6_related_000123F AUGUSTUS stop_codon 57896 57898 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHPDSPQTSVPSAINPVAAKVAV # PLPEPSPSVSPTILETPPGDSLRPRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEK # FSEKYLGPFKVISRPGTLSYEFKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g52 ### # start gene g53 6_related_000123F AUGUSTUS gene 63442 65118 0.52 + . g53 6_related_000123F AUGUSTUS transcript 63442 65118 0.52 + . g53.t1 6_related_000123F AUGUSTUS start_codon 63442 63444 . + 0 transcript_id "g53.t1"; gene_id "g53"; 6_related_000123F AUGUSTUS CDS 63442 65118 0.52 + 0 transcript_id "g53.t1"; gene_id "g53"; 6_related_000123F AUGUSTUS stop_codon 65116 65118 . + 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MSDMWNHRAKPVPLDFDRIMQETEVGNGKEEEESVALKDQKKLTTKENLELFISSVSALSARLSPSSSTKETVIEFDK # DDPDTLDFVTATSNLRSLAYGIPQKSKWEVKEMAGNIIPAIATTNAIIAGLIVLQGVHLVAAKLGSLAGSSSTSPSTSPSFTSTTTNSSYTALRNIHI # QLKPSVPLSAITTSRPNPACGICRDVYTVVRCDPLRATLRDVVQGVLGGTPTTSTSTSTSNSTTPSSTSTTPPTPSISHFTIFASSPSAPSATRILAD # PDWDDNLDRTLGSLNVRCGMFVNVVYEGDEEEEDEDEGGDQENDENDEGEGESERERDENENRKGSEENEKWQWEWKTLSIGIGGLPPNYHPVDENGE # GNLGWLMLPDPLPRLVSRKVKVNKRKEEERTSIATPQQQQQQPQRASLKRSLGEDEDGDGDIIILDDDNSTYPPAAKRRKTSSNPPSSKHPLAHPLAH # THTLAHPLARGPSKSPSKKKKLEEDGLVLMESAEEVLDDISEGVNRVNGGNGVNGDVNGGNGGEGESRGNGEGGEGGDWGDGDVIVID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 6_related_000123F AUGUSTUS gene 66194 67181 0.4 - . g54 6_related_000123F AUGUSTUS transcript 66194 67181 0.4 - . g54.t1 6_related_000123F AUGUSTUS stop_codon 66194 66196 . - 0 transcript_id "g54.t1"; gene_id "g54"; 6_related_000123F AUGUSTUS CDS 66194 66983 0.49 - 1 transcript_id "g54.t1"; gene_id "g54"; 6_related_000123F AUGUSTUS CDS 67051 67181 0.4 - 0 transcript_id "g54.t1"; gene_id "g54"; 6_related_000123F AUGUSTUS start_codon 67179 67181 . - 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MQSHLRRLGAYTYSKKIEAAFCYAQITELEGSQDQVLDEIEQRKLDRIKKRYKSLQESLLVADMQHKRVSDEIEKYQG # LALGDTAIGHICAAFHGYADRDLLTTLNVKTLDNKRSIHSSNTHTPFPSSITDANLVDVSLIKITDPSFIPKNMCIQLFELIQELRPGQEVSLDCNAV # TKEQTGEVGLLKAYFGLPDFNPNPNPNPNPNPNPVVLGALDENEKQKSRQAQYFVQEYAVYESGFSAAGSSGAIVYTDGFAAVGMAVGHFVSLIPMCV # VLPLDRLVRSVERAAGVELEFVPPIFEEEEGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g54 ### # start gene g55 6_related_000123F AUGUSTUS gene 68605 69498 1 - . g55 6_related_000123F AUGUSTUS transcript 68605 69498 1 - . g55.t1 6_related_000123F AUGUSTUS stop_codon 68605 68607 . - 0 transcript_id "g55.t1"; gene_id "g55"; 6_related_000123F AUGUSTUS CDS 68605 69498 1 - 0 transcript_id "g55.t1"; gene_id "g55"; 6_related_000123F AUGUSTUS start_codon 69496 69498 . - 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MHPQLSRAQVLSNLAVTPDCIGLEEQPSASIEREKLQTVLTTQSSSNTAIDGIRSDDTRILLALSTPLGLHLAHGLAY # TVGSALGCVPPSVEECLVAFTTTNRVNLTAGARAWSKHAHRSFVESDSQVLQLSQSLDAGDRDAFTAQQRKQRKPPPPMGWWGTPSGPVATINENALH # LFWKIIGNASWRNLHWLPHSVLVYEVRVKMGYGMRWSQDRSQLDQGRQSGPLAVQIIDMPRRSDDGPDKEVARGLRAKVINMNDKGDADDGLDTDHPP # WIFRGFVEPMMENGHEKGWRHAP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 6_related_000123F AUGUSTUS gene 69893 70922 0.64 + . g56 6_related_000123F AUGUSTUS transcript 69893 70922 0.64 + . g56.t1 6_related_000123F AUGUSTUS start_codon 69893 69895 . + 0 transcript_id "g56.t1"; gene_id "g56"; 6_related_000123F AUGUSTUS CDS 69893 70066 0.69 + 0 transcript_id "g56.t1"; gene_id "g56"; 6_related_000123F AUGUSTUS CDS 70141 70377 1 + 0 transcript_id "g56.t1"; gene_id "g56"; 6_related_000123F AUGUSTUS CDS 70437 70922 0.91 + 0 transcript_id "g56.t1"; gene_id "g56"; 6_related_000123F AUGUSTUS stop_codon 70920 70922 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MASLASRSATQALRNTARRAAPRMVSAPIKSQAASYSLLAKAAVAANATSSQKTSSIEGARGIKTLDFAGTKEVVYER # SDWPLAKLQDYFKDDTLALIGYGSQGHGQGLNARDNGLNVIVGVRKDGESWKQAMEDGWVPGETLFPIEEAIKKGTIIMNLLSDAAQSQTWHEVAPLI # TKGKTLYFSHGFSIVYKEDTKVIPPSDVDVILVAPKGSGRTVRTLFKEGRGINSSVAVFQDVTGKAKEKAIALGVGIGSGYMYDTTFEKEVYSDLYGE # RGVVSPTLLLSSSTHRCSRMIFLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 6_related_000123F AUGUSTUS gene 72151 73656 0.64 + . g57 6_related_000123F AUGUSTUS transcript 72151 73656 0.64 + . g57.t1 6_related_000123F AUGUSTUS start_codon 72151 72153 . + 0 transcript_id "g57.t1"; gene_id "g57"; 6_related_000123F AUGUSTUS CDS 72151 73656 0.64 + 0 transcript_id "g57.t1"; gene_id "g57"; 6_related_000123F AUGUSTUS stop_codon 73654 73656 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MPEPDLCTCTPGEKHLCWDVDYEVYGVIHNNDIGCITCNDFASHIHHSRQQKVRGIEEAYAKMHEHHDILWRRGLKEG # ARRYSSTAPLDDLQVLEEDLNIAQIKQAKAEEELKYLTRVVLGQISLVEFLSTFTHPTFATREEFWLSMSDTAAANTTKYLWNDDVNVENLILAQDSS # LRHITPDFQLKSSAKVSDIRHRADTSLHTSLQVSTDNHKCDHSSSSSAIPRASPSIEHPTISRHIPNLRPGEDIPGYYEGNLRTGNLREVLTTLFDEA # HSGDADALAKCKALCREAHMVDTPDRTFGMRYVLIHWKKPPLPDSPLSRTSRRTGRNRHRDRRPGHSSDTSNVVLVNPKLTDSPEVWFEYLKTHSLSW # PNGVRKQSNGDPWMADLRASRMFAQFRPLHEDMTYIRNQFTIATLSLFTDKGRYKILVRQLGLRISPVAKYVPFIGQSGGSGNVSEEDVARHYASCGV # TVQEVENEVEGWAIQYKRERDQRPSQSRSIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 6_related_000123F AUGUSTUS gene 82494 83176 0.37 - . g58 6_related_000123F AUGUSTUS transcript 82494 83176 0.37 - . g58.t1 6_related_000123F AUGUSTUS stop_codon 82494 82496 . - 0 transcript_id "g58.t1"; gene_id "g58"; 6_related_000123F AUGUSTUS CDS 82494 82751 0.94 - 0 transcript_id "g58.t1"; gene_id "g58"; 6_related_000123F AUGUSTUS CDS 83015 83176 0.5 - 0 transcript_id "g58.t1"; gene_id "g58"; 6_related_000123F AUGUSTUS start_codon 83174 83176 . - 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MEMDTEVDMEVDTEANMEVDTEANMEVDTEANMEVDTEVDTNIGGMVPPFLMQMVEGETEVLKKRKRNLPKPPNPAIL # KIHSKSHVPTTEEDFINEELAEFEHDRYADDEDDENADTEDEDADNNGEDVTLTSREYKRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g58 ### # start gene g59 6_related_000123F AUGUSTUS gene 83213 84141 0.32 - . g59 6_related_000123F AUGUSTUS transcript 83213 84141 0.32 - . g59.t1 6_related_000123F AUGUSTUS stop_codon 83213 83215 . - 0 transcript_id "g59.t1"; gene_id "g59"; 6_related_000123F AUGUSTUS CDS 83213 83676 0.71 - 2 transcript_id "g59.t1"; gene_id "g59"; 6_related_000123F AUGUSTUS CDS 84042 84141 0.37 - 0 transcript_id "g59.t1"; gene_id "g59"; 6_related_000123F AUGUSTUS start_codon 84139 84141 . - 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MLLSQQLSLQGANTIFPKDAVTNPMAPPPEKPVCKQITQGSSTGHFVYLGQGGDSFDVDSHLNERATSINHSQILRLP # EDIRTGSDVGDFDYNGNMGRGSTASSGGSHYHGSQPGPVVGFGMVMQILTVMEGAMEETMEGILEIIIEATKTAMVREGEAIRLMTVDILLDIEEVFL # VYKAMEKVIGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 6_related_000123F AUGUSTUS gene 85469 86029 0.77 - . g60 6_related_000123F AUGUSTUS transcript 85469 86029 0.77 - . g60.t1 6_related_000123F AUGUSTUS stop_codon 85469 85471 . - 0 transcript_id "g60.t1"; gene_id "g60"; 6_related_000123F AUGUSTUS CDS 85469 86029 0.77 - 0 transcript_id "g60.t1"; gene_id "g60"; 6_related_000123F AUGUSTUS start_codon 86027 86029 . - 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MNHSQLLVHPSEDIQKFSGPFKDLKQSLEETLRWVSEKVSETSLHELLCISNVSLKVLQIHPDTFHEISATVDLLPLQ # DTSPASPFTSIVFNINVSTLAHRDKNDKSACICITVGNPQGGELGLYEPKLLLETCNGDVVVFHSDRYTHFNLPYSGTRGSIVIHADKTGVSYQKMGL # VGSTIFTLNK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 6_related_000123F AUGUSTUS gene 86517 86888 0.61 - . g61 6_related_000123F AUGUSTUS transcript 86517 86888 0.61 - . g61.t1 6_related_000123F AUGUSTUS stop_codon 86517 86519 . - 0 transcript_id "g61.t1"; gene_id "g61"; 6_related_000123F AUGUSTUS CDS 86517 86888 0.61 - 0 transcript_id "g61.t1"; gene_id "g61"; 6_related_000123F AUGUSTUS start_codon 86886 86888 . - 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MKSERTLLSTSPLERRFLLFSPEQTGAAQHASAVSELSSEEETFTPPSTVPPISILFNRMGFQSQDSEGIHQVLFTPY # KPAKTKEPFPPDYRGRSKWTEKERSLAQDCVTPDSLESYASEVGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 6_related_000123F AUGUSTUS gene 87918 88861 0.31 + . g62 6_related_000123F AUGUSTUS transcript 87918 88861 0.31 + . g62.t1 6_related_000123F AUGUSTUS start_codon 87918 87920 . + 0 transcript_id "g62.t1"; gene_id "g62"; 6_related_000123F AUGUSTUS CDS 87918 87921 0.31 + 0 transcript_id "g62.t1"; gene_id "g62"; 6_related_000123F AUGUSTUS CDS 87996 88861 0.82 + 2 transcript_id "g62.t1"; gene_id "g62"; 6_related_000123F AUGUSTUS stop_codon 88859 88861 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MSPPLDVSVELTLDFWVLLRFLFGCGSGCGSGRETRSGRESECELESEHGCEGRLDGESERGSKRESKSETGSECELE # SGRGCEGRLDGEGGRERESERERESERERESERERESECERGCKSEFKCGPERESERGRERESEVKPGPNVSLRVDVDARADWMARVDANGKANANAN # VDANPNPNVDANANPNVDANANLNVDANVNPNPNVDAKANPNVEANPNVDANPNPNVDGNTNPNANLNANLNANANLNANANLNANTTPNLNPKVDVD # ARGEHETDWARNWEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # # ----- prediction on sequence number 3 (length = 38262, name = 6_related_000165F) ----- # # Predicted genes for sequence number 3 on both strands # start gene g63 6_related_000165F AUGUSTUS gene 1159 2851 0.76 + . g63 6_related_000165F AUGUSTUS transcript 1159 2851 0.76 + . g63.t1 6_related_000165F AUGUSTUS start_codon 1159 1161 . + 0 transcript_id "g63.t1"; gene_id "g63"; 6_related_000165F AUGUSTUS CDS 1159 1428 0.76 + 0 transcript_id "g63.t1"; gene_id "g63"; 6_related_000165F AUGUSTUS CDS 1493 2851 0.97 + 0 transcript_id "g63.t1"; gene_id "g63"; 6_related_000165F AUGUSTUS stop_codon 2849 2851 . + 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPPAVRVKQPQRRAASESPRDPPPHFDLDTGDHEDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPG # GPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLSYLSG # SAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMA # RLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGG # QRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 6_related_000165F AUGUSTUS gene 3184 6747 0.96 + . g64 6_related_000165F AUGUSTUS transcript 3184 6747 0.96 + . g64.t1 6_related_000165F AUGUSTUS start_codon 3184 3186 . + 0 transcript_id "g64.t1"; gene_id "g64"; 6_related_000165F AUGUSTUS CDS 3184 6747 0.96 + 0 transcript_id "g64.t1"; gene_id "g64"; 6_related_000165F AUGUSTUS stop_codon 6745 6747 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINPVAAKVAV # PLPEPSPSVSPTILETPPGDSLRPRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLNAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRCWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEK # FSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g64 ### # start gene g65 6_related_000165F AUGUSTUS gene 7117 8211 0.53 - . g65 6_related_000165F AUGUSTUS transcript 7117 8211 0.53 - . g65.t1 6_related_000165F AUGUSTUS stop_codon 7117 7119 . - 0 transcript_id "g65.t1"; gene_id "g65"; 6_related_000165F AUGUSTUS CDS 7117 7698 0.54 - 0 transcript_id "g65.t1"; gene_id "g65"; 6_related_000165F AUGUSTUS CDS 7750 8211 0.53 - 0 transcript_id "g65.t1"; gene_id "g65"; 6_related_000165F AUGUSTUS start_codon 8209 8211 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MSASRTITTTTSATAGPSRSRPVPPPPPPASDSAAQEEEGLEDEDEDDIIRKAQARVERVRARKAAEAARKKAEEEAA # RAAAEKKRKAQEAQERAERARQQEEEVVERRRLLAAAATARSQRGTSPSEVSASPRRPVVEIRRTKSKGKGKARAEPVGGDPDDGDEGDDDDDDDKEP # CERCRAKKISCQMQAGKRSSIICKPCHDAKVRCSYSGRPSTVKREGGSNPTGERLAVLESQVAQLLADNRQLRDGQVKANTYHRHMNRKLDWLVTDAA # RRRRTPPELPQAGPSELPKKRRRVMDSDEEEERGREQEMEEDGEGEEEEGGGMEVEGEVEAPAPTAKGKERAE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 6_related_000165F AUGUSTUS gene 9086 9319 0.83 + . g66 6_related_000165F AUGUSTUS transcript 9086 9319 0.83 + . g66.t1 6_related_000165F AUGUSTUS start_codon 9086 9088 . + 0 transcript_id "g66.t1"; gene_id "g66"; 6_related_000165F AUGUSTUS CDS 9086 9319 0.83 + 0 transcript_id "g66.t1"; gene_id "g66"; 6_related_000165F AUGUSTUS stop_codon 9317 9319 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MLCGIDMGISRIGGLNLIKLKLKHTDPYRELELCADTTTQHDFPLRPTTDPKFKEYPTTGYNFSQSQGAEHDILITD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 6_related_000165F AUGUSTUS gene 13580 15205 0.79 + . g67 6_related_000165F AUGUSTUS transcript 13580 15205 0.79 + . g67.t1 6_related_000165F AUGUSTUS start_codon 13580 13582 . + 0 transcript_id "g67.t1"; gene_id "g67"; 6_related_000165F AUGUSTUS CDS 13580 15205 0.79 + 0 transcript_id "g67.t1"; gene_id "g67"; 6_related_000165F AUGUSTUS stop_codon 15203 15205 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MHRLSPKLTPSSSAVAATQDELAGTGSNRNHGNGLHRRGGGGAGRKNGAVTSSHINGVVGRKSGRSTSPVASSTLVST # SSTSASAPPQKPPQSPTPTIRTSASTIPTKRKHPSTLDGRPALDEDSESIRCICGFSVDDGWSVGCDGCGRWVHGVCFGFEAKDKENLPDHWWCWECD # PSLLERIDREKARSLQIARLATAAGDTAGNGRRRSSPGVDRKARKINIATGAGPFLSPSSGISPNFPSIFPDHSSHKRKRTSVAAPSPLTTGSAFSFP # PTTGQPSSADDFIDIEESWSHSYIDISHDIIPESEARERLRKQASEWRGISAISPVHDLSSKPGWPYFNTTPVRYPHPVSPSVSSVSLRPINSSPGSV # LPPSYAVHTTHPIPSQSLLAPYPSVITSSSTYLQDPLNAYATLGMPKPRVHLIGPPLDVSLDARGKGGKARFVRSGCQPNAVLRPVLCDGKRGDPDNI # YRRTSSGEQADSSSHSAHPPPPQDTPDSLSFAIFALRDLKVDEEIVLGWEWDDANVVHLLPALLQDKDIFP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g67 ### # start gene g68 6_related_000165F AUGUSTUS gene 15409 16656 0.4 + . g68 6_related_000165F AUGUSTUS transcript 15409 16656 0.4 + . g68.t1 6_related_000165F AUGUSTUS start_codon 15409 15411 . + 0 transcript_id "g68.t1"; gene_id "g68"; 6_related_000165F AUGUSTUS CDS 15409 16656 0.4 + 0 transcript_id "g68.t1"; gene_id "g68"; 6_related_000165F AUGUSTUS stop_codon 16654 16656 . + 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MKEFVDEVDDLDSEHELQRERELRNVNSGIERSEEFKHIRGMQDGQGSVNIEMIKPLSTSETFSDHLSPSHPTNSHYQ # PPSTTGSSAPPSMTPPFESSLSSTIPGNLQTHLQNSSFSRSSLMYARPLSPSLIQQEHTEQEVELQTQSSAHPTFRRLNKHSTASSSQIPSSSPTVDL # GPLIGVPRGFRTREKVEGSGGLGGVEMDTDDSENRGDSVEVGQDVHTKAYVRLGPQDEKQRNFPALHPNLDADSSIFSVYADQATQPPAHNFPLHPYP # YPIHGITPSPPSVYSYAPFYGTPYPFPHTTYPLYIPHPPGNPLHNPIRNGGKEDLFWGDIPSIARVDKGKGRAQDIDIVAADDEDNDEISMGRNNKEG # IDVVVNEGKFENSCISVHLLSGFYRFFCSFVLCSFVSQAYPSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 6_related_000165F AUGUSTUS gene 16776 20360 0.3 + . g69 6_related_000165F AUGUSTUS transcript 16776 20360 0.3 + . g69.t1 6_related_000165F AUGUSTUS start_codon 16776 16778 . + 0 transcript_id "g69.t1"; gene_id "g69"; 6_related_000165F AUGUSTUS CDS 16776 18957 0.3 + 0 transcript_id "g69.t1"; gene_id "g69"; 6_related_000165F AUGUSTUS CDS 19066 20360 0.71 + 2 transcript_id "g69.t1"; gene_id "g69"; 6_related_000165F AUGUSTUS stop_codon 20358 20360 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MKRRWQHERNESKSPIEGKRTRRAYEDMQVDDDGRTRGGQGALDHLLPSIALYTQRSTFTDPTTGDLSTTTSPAMPTI # STTHAPVVCSPSTTSPLLTFANLSLLSPVPVSSSSTSSLYPFPDRQLPSHKSTNWWDVSSQGSRHQPKSPMPRAQFRSQSPPRHISPTRRAITDPLAA # LAAAAAAARPISPLPNRIYSDSRSKSRSRSPRSENRLGTHSTLNEPVHDRYSYDMTTPYLGSPRRSRRMSTSDGERSDPDHHHPSHFRGLEDFDHDNQ # DVRQSRATSMLESHDAVLGPGGIRVLSSPEHEWLPLRKGDTSTSTESSYGATNVLSATDFIDHSRLERSVIAIEDESSVDSRSLKVKAELLNEDHIPS # STHLVHQNCEPVEVVDVERPCFVGTSAEPETALQITQPSHLVPTLHPPLASPNELPRSDLLSPTDSYVAPLSPLTPPATNLKDIPPWPASPSPRNSPS # VSDPVQKSSLPPTSLVPDAIPSSELQPAQYNEARPSTLVSADSHAPTDSPMSALSSVGSSSPINANFTLHAIENKENDCDNECTAQVTRSSPFSSPLS # SPMEKLISLPAYSAPIEQSSSSSGPVHERTEVNCPPPNTIHHIPSELPAASVGSFQSQPDPPLHASIHDVPALEHSSSMSPLHSPGNDSPTTPKEVDS # EEVETMDVDVMNAHDTDTNDEQERKAQLTSKLSQMLSHNLLKANTEYSTVYQRQSFSSLSLSSELAPQTSPALATSPTPTIFAASKVKKMSLKDFAIR # KRRQKEEEEREKKEKEQDKGNDVEQKPVDWEDAIIIEDRQKVQESHVEVEAPVDSNGEDDAEKPPETDSLSAPPAKYVVPAVLESNIEERGHNVAKSD # VDVIMKASETLNKLINSSSMSMKSMTVAHEYSASPPHFDVSTTAKLPPMVSSLSASPNIASRSPRGLITDPIIIADSSLSSLTREKTMAPHSVPEDGE # IEDGDSRTMFRFSPSPKHPSSNIKSSYLLSTSQPKSYSPPPRAFKIHENIVTNEQRSRTPPTQPRSFTARSPSVSSVPHGSPPIRRLAIAPVANGLSP # KVAANVTSTTSSAPPSANPALGRTPPSGPRALRQLQQHQHSGGGVGHMGPRNSNAYIPRGLPYDRDRFRDRGGDFGRERDRDLHWNAPGVQRLRTSEN # RY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 6_related_000165F AUGUSTUS gene 25753 27647 1 - . g70 6_related_000165F AUGUSTUS transcript 25753 27647 1 - . g70.t1 6_related_000165F AUGUSTUS stop_codon 25753 25755 . - 0 transcript_id "g70.t1"; gene_id "g70"; 6_related_000165F AUGUSTUS CDS 25753 27043 1 - 1 transcript_id "g70.t1"; gene_id "g70"; 6_related_000165F AUGUSTUS CDS 27094 27647 1 - 0 transcript_id "g70.t1"; gene_id "g70"; 6_related_000165F AUGUSTUS start_codon 27645 27647 . - 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MASSHARNVKKAAAAQAREGRARKRLGLDVTFELLPDSEPATQAREGRAHEHLGLDVTSELLPDLEPEKLGELVLEED # DLEMLADMLEDLDLWDPTDGPMDFGQESDSEVEELKGEELVRSLEEKEARTESAFEVLMKERSVKEWGRAENSSQMGVYNGRSDRTKRYHAQKVVEKK # KKDAAMRNTNTAKAFTSFFILIQKAVVVAPESIPRTCTPESDPTPTLPNPSPMFSVTGNSECPELEGFLSDAEEDPGDDFDLLDGDKTATADYRCGIN # EQSASLVGPPRKRQKRAERAEASAKYQQTYQQTRDNQLTLALKDIEKLLASKKDSFVNGHDGLQATRARSIHSTLTMVVEKKKSLIDASHIAAEANNF # SLNWGSRCIRQWTQNWIKTRVLPQSSRGRHTKVYSLLSEPAARDAIRGYLRTNKWSVNPPRLKKLFANVLAPDEAREYAKQIISQEMPRGLKGFVEEH # LLPRMQCRPGRFGLSLSSMRWLMLREGFVFIEHKKAVYFDGHERPDVVQDRQTRFIPQANIFRHQLVRYDTKDVTKELPSEEGFADKPKYVLCSHDEM # VAQAHDGQKKGWVLEGEQPLKKRDLVGEYIKATSFAQQLDGSRMPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g70 ### # start gene g71 6_related_000165F AUGUSTUS gene 28904 31648 0.53 + . g71 6_related_000165F AUGUSTUS transcript 28904 31648 0.53 + . g71.t1 6_related_000165F AUGUSTUS start_codon 28904 28906 . + 0 transcript_id "g71.t1"; gene_id "g71"; 6_related_000165F AUGUSTUS CDS 28904 30376 0.98 + 0 transcript_id "g71.t1"; gene_id "g71"; 6_related_000165F AUGUSTUS CDS 30542 31648 0.53 + 0 transcript_id "g71.t1"; gene_id "g71"; 6_related_000165F AUGUSTUS stop_codon 31646 31648 . + 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MSSSSSNAVTGAPDPALPPVSSPPHPDPAERVVDAAIDELASTLEEPPLGQLALFKSVFGVGVSLARYIVDDPLWPLL # AAAGPPCSFCVRGKKEANCSVVPHLARCSNCDDKKPCILGRLARFRYFSRKCSRDLAFARRFLEVHGDPGQRTRFALPSEQWRDIATKVEASTNSTVA # LMELNALDEQDQRELDRLELGEFRRQQPQLPRPLTTSSLPSPIPSAVATKKRKRSVRQEEGGPSSHKRAVGATPGSEVSPKVHDRKRKCSAGESRDAE # VPDYRRVVLVLRPPLVDTPGSAPLSGGRAEEDVPSSPPLGKTGSTGVPPSLSQDRSSGLPVRRRANSPGSSNQFIPPVLSERRPVLTIQTPPPSQVSS # LPFYSRNLCLIPVPQRSPDVLHPFPRARATAALRAENETLRAEVADLRKLLETSRAETSTLTSLLRDTTTSLDNRNKDLEASRRALQDVAADRLEYSR # VLAQFRAIEAELPEAPLEVGVKRSFEAHEELDAANARAIRMRDRLEDLEETVHRYRARAHVAEELIRKYPEDEGLYEVDLPSLSSLQNQLTASEAMVR # RLATFAHRLYSADPANLLHHHNTYVGDLIEAIIALLSRSLLHPPERMRTVVELALEYLSQGWLTHGELHLRSTSSLLYYYSNAADRVDGLYQDMFTHS # RFSTDAAFLTAAQHAGYVEARPDSLEPPLHRQLFSFDHPIPLPQSPISDHIPAVPMMDSVMLMWEDMIRTYVREVLGYPASPDRASSPVDVPGSNDPL # PTASPLVAPDAPPALDASESVSQDAPLFLPESLSPTSPRPPSPIPSSSRVPHVPREIVDLTMDDAEDLYESQEEFLARTGGAVTVKQEDTESEVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g71 ### # start gene g72 6_related_000165F AUGUSTUS gene 32880 33386 0.41 + . g72 6_related_000165F AUGUSTUS transcript 32880 33386 0.41 + . g72.t1 6_related_000165F AUGUSTUS start_codon 32880 32882 . + 0 transcript_id "g72.t1"; gene_id "g72"; 6_related_000165F AUGUSTUS CDS 32880 33386 0.41 + 0 transcript_id "g72.t1"; gene_id "g72"; 6_related_000165F AUGUSTUS stop_codon 33384 33386 . + 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MYMRSISSIQWFFNNAVDEDEGLYRMILEHSRFDSDSPFLTAAHHAGFVPPPDDSVEPPLHRRMLALSTALPHSEGVG # RWEDIVPALPSIDQLTADWEQMMLQYIHHITDTPLPGTDSQGPMSSVEPATESLPEVLVQQSPEAPAALESTSSVGLHPWSLYSCPSRSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g72 ### # # ----- prediction on sequence number 4 (length = 87635, name = 6_related_000127F) ----- # # Predicted genes for sequence number 4 on both strands # start gene g73 6_related_000127F AUGUSTUS gene 3501 4076 1 - . g73 6_related_000127F AUGUSTUS transcript 3501 4076 1 - . g73.t1 6_related_000127F AUGUSTUS stop_codon 3501 3503 . - 0 transcript_id "g73.t1"; gene_id "g73"; 6_related_000127F AUGUSTUS CDS 3501 4076 1 - 0 transcript_id "g73.t1"; gene_id "g73"; 6_related_000127F AUGUSTUS start_codon 4074 4076 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MSFGSDSGSFLEYALSLPDPVGPDPETSDSSDQSSPSDHNSEQESVQSGTISNPDQSSYDSEFPGPFNYDYLHESSDF # DSDHSGPYDLRYLHSYPSSSASDSVESFHSFASDNSEAPELRPGDDRSGHPHLGPDGRLLDSERERRRVLGLCFYCGGEHMKVDCLKLQARTGQNYDA # DNSESDVPGSDDGSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 6_related_000127F AUGUSTUS gene 4527 7204 0.65 - . g74 6_related_000127F AUGUSTUS transcript 4527 7204 0.65 - . g74.t1 6_related_000127F AUGUSTUS stop_codon 4527 4529 . - 0 transcript_id "g74.t1"; gene_id "g74"; 6_related_000127F AUGUSTUS CDS 4527 5801 0.68 - 0 transcript_id "g74.t1"; gene_id "g74"; 6_related_000127F AUGUSTUS CDS 5906 7204 0.91 - 0 transcript_id "g74.t1"; gene_id "g74"; 6_related_000127F AUGUSTUS start_codon 7202 7204 . - 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MSSSPSKAPSAAGPSRLSLPRSSSEGEVEQDQLAFTIESPSIPQLQLFENVFNTGKSLAAYCRDDPLWSTLAAVALPC # SNCTKHPETCKVPEGSPRCAFCTGKKTCSLGKLLRHRYFARRCNQDLAYSRRFLEMHGTPAQRVSWTIPGAIWRRYDEVLHSSTSATKVLVELNMLDE # QDSRAIDRSELRRFQEAQEQETLLAAKRKYVNDPPSSKVRPKKRRLAKVVGERRVEEPVVEEVPRLIRLVIPPSRLAPSDPGSALSASQHPSVALPLV # SPHATGRLGSVQDPPPLARLADLVDQRTGSQAEVSTRSLGPGFSSIKASREDPAVPKMSPVVRPPLIPRILSQHPYRVENERLAAHVRLLESQLASSR # QENATLTSALRDTSVSLEARQGELDQLRESVSSAAQQQELHDRLLDQVETLKRALPGPPNESRAKYLSRFESSNRRNEELETSLVQQQSLVDESNALA # VRQRKKIEALQEEVHRFRERALFAEKMIREYPEEGSYSVSLPPLSEVHGELNEALASLRRVATFAHRLFRCDPASVLHQHNRYVGVIIDAVISFLRRG # LDASDEDVLALNLQLALQYMEAAHFIHAELHLRSLSSIQWFFANAAEREEGIYRLVLAHSRFSDDAPFLNVAQHAGFIAPFSDSLEPPLHRRMFALET # ALPYHGAGNWEDLVPAVPSLDTLMQEWEAMMSSYICFVTEPPPPQRDPQGEDSAHHEEVSALQEREGGGQKKGSVRPEEVSTLQEGEGGVTAAIPLFL # PEPLSPTPVASAASPPSLPPRFGSVANLVIDMTADEDDDDLYESPGSFERRSHSEGNPGEDDPMEDGPCHMHAIHPYASRPGPERPDFGVITL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g74 ### # start gene g75 6_related_000127F AUGUSTUS gene 11200 12249 0.31 + . g75 6_related_000127F AUGUSTUS transcript 11200 12249 0.31 + . g75.t1 6_related_000127F AUGUSTUS start_codon 11200 11202 . + 0 transcript_id "g75.t1"; gene_id "g75"; 6_related_000127F AUGUSTUS CDS 11200 11394 0.82 + 0 transcript_id "g75.t1"; gene_id "g75"; 6_related_000127F AUGUSTUS CDS 11563 11920 0.32 + 0 transcript_id "g75.t1"; gene_id "g75"; 6_related_000127F AUGUSTUS CDS 11975 12249 0.99 + 2 transcript_id "g75.t1"; gene_id "g75"; 6_related_000127F AUGUSTUS stop_codon 12247 12249 . + 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MSVAPASDPHIVSLVLQSKKALQEGEQICSKANELSATSTQTSIDVLILDAKVKWITDNVLEQLKDWDNLRTKQTDAL # DKILNELGSQRVPPDFHQTSTASSIFGSQNSEDEQQNYTQSNGLSTLSRSPSDTIQVPRPKPQADLKNWKTLRDFVDDQAIEDIFECMEEEHTIVEVS # KLLCVYQLDEYSEKLTTAIHSIREYLPEMTPPPSIEQLITSQDSAQIGMAGHLESLAAHYDQMCNALREREAGDVFGEDDLQGTVYQNLPIYRVNFIK # T] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 6_related_000127F AUGUSTUS gene 18037 18990 0.99 + . g76 6_related_000127F AUGUSTUS transcript 18037 18990 0.99 + . g76.t1 6_related_000127F AUGUSTUS start_codon 18037 18039 . + 0 transcript_id "g76.t1"; gene_id "g76"; 6_related_000127F AUGUSTUS CDS 18037 18990 0.99 + 0 transcript_id "g76.t1"; gene_id "g76"; 6_related_000127F AUGUSTUS stop_codon 18988 18990 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MLRLSIPWYVPCLPFWVSNNHPPQTASQVSSLQSAISSFDSSPDMSLEKSGNHSSSSEISQTAIITSLFGWTLAPERP # RSTSTSRSNSRLPSASRTPSLSRSTSVVPVGSPDRSRPLLHTAVSQAMARDTSLVHCVLCQRRVGLWAFAPPKQPPATSLEASEASSPQQPKRNNSIL # NKRQFDLLKEHRSYCPYVVRSTVVPTLPSSPSVVSVSTPRTSNLHIRSSSSTSQLNGTSGARAGSNATEGWRAILAVVMRYRMAQRHQLSRIEGLMTG # DDAEGQRSSQDSIGVDDGVDMMVQGVKARGVRRSSSTPRYFCL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g76 ### # start gene g77 6_related_000127F AUGUSTUS gene 21198 22001 0.72 + . g77 6_related_000127F AUGUSTUS transcript 21198 22001 0.72 + . g77.t1 6_related_000127F AUGUSTUS start_codon 21198 21200 . + 0 transcript_id "g77.t1"; gene_id "g77"; 6_related_000127F AUGUSTUS CDS 21198 22001 0.72 + 0 transcript_id "g77.t1"; gene_id "g77"; 6_related_000127F AUGUSTUS stop_codon 21999 22001 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MQPSSSLSRMTVNITKYKISSLPIPPSSHLLTHNLVPDPVTGGTSVSNFIEKILAKTPSVQRRARLTSPETHFSYVTP # FPTSFPYNIEPPSPDESENIDDKGAYVEKWLADREARNPKADAISGSSGKLQLHYSLLPENDQPRILIGLSETGLRDCVPHLDVGDAFAILGEPALVV # SDTEGHGSNHESDQEEVIAARQEMIDVLGGRAVLMSQDYPKSESRPERGGFAPWSHRYSGHQFGTWAGQLGDGRAVSIREFPRLSLSISFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 6_related_000127F AUGUSTUS gene 23266 23883 0.49 + . g78 6_related_000127F AUGUSTUS transcript 23266 23883 0.49 + . g78.t1 6_related_000127F AUGUSTUS start_codon 23266 23268 . + 0 transcript_id "g78.t1"; gene_id "g78"; 6_related_000127F AUGUSTUS CDS 23266 23883 0.49 + 0 transcript_id "g78.t1"; gene_id "g78"; 6_related_000127F AUGUSTUS stop_codon 23881 23883 . + 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MENHRLDFNRTFRLLSFFKPPASDNDNARFIQQLLDNVSPTDRQMLNMDSARKEWDEWLARFKGRIEEDQIFCKDDAG # NVASAVSLDDAYELRVKEAKKTNPRFVLRQWVLEEIIKRVESDPEKGKRQLAKVMHASSFSFHEIFFARPIYIPQMACSPFEAWGAEWEEMSEDGNGE # GLSVEEKEERRYCDIGEGSMLGFQCSCSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 6_related_000127F AUGUSTUS gene 26229 27763 0.62 + . g79 6_related_000127F AUGUSTUS transcript 26229 27763 0.62 + . g79.t1 6_related_000127F AUGUSTUS start_codon 26229 26231 . + 0 transcript_id "g79.t1"; gene_id "g79"; 6_related_000127F AUGUSTUS CDS 26229 27237 0.66 + 0 transcript_id "g79.t1"; gene_id "g79"; 6_related_000127F AUGUSTUS CDS 27339 27763 0.95 + 2 transcript_id "g79.t1"; gene_id "g79"; 6_related_000127F AUGUSTUS stop_codon 27761 27763 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MPARYTALPSHEEVNARELADAFGSEDEDEMTTFQNHHTPQFRDNMDVEAYAGLPPATPSAVPGTYDFERDYDVPPPG # SPPPSSRALPNNFSNNIGFLPTSPIRHTFDRRPRNSFFRRIMGAVLPTHYSQIPTEDSPESVGPRHYVGGGSDNDGVFANVMAKPAPASESRIVRDPN # GNIHLVPEENQKEPPPSYAAAQADAVPAYWETTVHAPALTNGGEGADGTMLIDDLPSGSVWVFFVNLIISFFFQFVGFLLTFILHTSHAAKYGSRAGL # GLTLIQYGFYSRSASVAGWNVDGNGDGVEIITTDRTDPPIPSSLLNDTGIVDPSEQEVVPGVSWFLLLSSTISFWRVKRWESSIRSSTSSTATSAPHS # NEQSTPDSQFLTQAELENDVVMRRNLASVFGINFDDEEQTARDAIIANGGGGTLGGGAVGGGVFGWGASAGRLLVDENGHAIVIPGQEALEEARLARD # LRAAGLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g79 ### # start gene g80 6_related_000127F AUGUSTUS gene 28214 28573 0.59 + . g80 6_related_000127F AUGUSTUS transcript 28214 28573 0.59 + . g80.t1 6_related_000127F AUGUSTUS start_codon 28214 28216 . + 0 transcript_id "g80.t1"; gene_id "g80"; 6_related_000127F AUGUSTUS CDS 28214 28573 0.59 + 0 transcript_id "g80.t1"; gene_id "g80"; 6_related_000127F AUGUSTUS stop_codon 28571 28573 . + 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MAPYYQLATSSSKPLLPLDSDLLSSMQEANTATLKSLDETLESATATEGESEISDALKARANFLTRIGEKDKAIEAQK # LALEKTPGLGSRIDIVLTLVRIGYFWNDEPLIVWGLDNAEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 6_related_000127F AUGUSTUS gene 30572 32704 0.74 - . g81 6_related_000127F AUGUSTUS transcript 30572 32704 0.74 - . g81.t1 6_related_000127F AUGUSTUS stop_codon 30572 30574 . - 0 transcript_id "g81.t1"; gene_id "g81"; 6_related_000127F AUGUSTUS CDS 30572 32704 0.74 - 0 transcript_id "g81.t1"; gene_id "g81"; 6_related_000127F AUGUSTUS start_codon 32702 32704 . - 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MVVAALRGDTENTPLQLKLNDLAELIAKLGSAAGLILFTALMIRFFVQLGTGEPVRTASEKGIAFVNILIISVTLIVV # AVPEGKPFVFFFAATGTRLFFFVGLPLAVTIALAFATKRMTKEKLLVRVLGSCETMANATVVCTDKTGTLTQNDMTVVAGSVGIHAKFVRTLKENEGR # TNAEEKPSQAAVAAATRKHIHDFSLDQSQLNTILSPATQELFNEAIAVNSTAFQDADPNTGEMVFVGSKTETAFLKFASELGWPDYRETRTAYGLSAG # DEDSDSKEGLARSKGKVLQMIPFSSERKSMGVVISTGGRYRFYVKGASEILSKKCTKHIVVGRPGQDRPAYEDDRIETREIDELAADNISRTIIFYAN # QMLRTISVCYRDFEQWPPAGMAVDEEGEADFNDLAQDLTLVAIAGLEDPLRDGVREAVSKCHRAGVTVKMCTGDNVLTARSIASQCGIFTKGGIIMEG # PVFRKLSQPEMIEIVPRLQVLARSSPEDKKVLVETLKHIGDLVGVTGDGTNDGPALKTANVGFSMGIAGTEVAKEASDIILMDDNFASIVKAIMWGRC # VNDAVRKFLQFQLSTNVTAVVITFVSAVASNEEESVLSAVQLLWINIIMDTFAALALATDPASEALLNRNLNQKMLRYLPSTCINKSCSKAPIRSSSH # SYCISSVSKFLVSNRLPQITQLSKPWYSTHSCLLKFSTLSVREG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g81 ### # start gene g82 6_related_000127F AUGUSTUS gene 33462 34781 1 - . g82 6_related_000127F AUGUSTUS transcript 33462 34781 1 - . g82.t1 6_related_000127F AUGUSTUS stop_codon 33462 33464 . - 0 transcript_id "g82.t1"; gene_id "g82"; 6_related_000127F AUGUSTUS CDS 33462 34781 1 - 0 transcript_id "g82.t1"; gene_id "g82"; 6_related_000127F AUGUSTUS start_codon 34779 34781 . - 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MSAPNSPEIRIQVPDINVPDNDDHNIPGSSSSPTHSFSLSSPASSPLPIWDTSLLSPITAGRLDVPSPNSSASSAADS # ASIHDGSTISVPPSPTLSFRSSVHFEPKSTLALRDNHPNARSGGDSYALLSPSSMGQDTGSSHRRKGSTATDNSFASSNTETGTDPDSHSPRGTNELS # QIKTNTTEVTRIPSRSRSRESTSPLRKGKGRASPDDDAAQIHEDGLKAQVELIEDEDIIPAPFAFSPLTLARLLDPKSYDSLASLGGQDGLLQGLGAD # PTRGLHVGAVRNNRDSHENIHESDVGKTEVTKQGVGGDELGAGEGVSHRHPPLTPAIVLTQPDAEDGEGAIVKAGSTPSINSYPLKEKDPIPSAAFDI # QTFDASGAFQSSLEKRREIYGHNTLPVRKSKSLLALMAAAMKDKVLILLSIAAVVSLALGFFQDFGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 6_related_000127F AUGUSTUS gene 39678 40199 0.45 - . g83 6_related_000127F AUGUSTUS transcript 39678 40199 0.45 - . g83.t1 6_related_000127F AUGUSTUS stop_codon 39678 39680 . - 0 transcript_id "g83.t1"; gene_id "g83"; 6_related_000127F AUGUSTUS CDS 39678 40199 0.45 - 0 transcript_id "g83.t1"; gene_id "g83"; 6_related_000127F AUGUSTUS start_codon 40197 40199 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MHKSLPFDELCALYAVSDVCLVTSTRDGMNLVSLCYPFGFIHVLTLKLLQVSYEYIACQQARQGVMILSEFAGAAQSL # NGSIVVNPWDSQQVADAIHEAVIIDAPTRAENHRKLFKYVNKYSAAFWGTSFIKEMTRIKPGDVGKEKEGQAVLTAKGEAGGFGHSVPGPPSIKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g83 ### # start gene g84 6_related_000127F AUGUSTUS gene 42096 42975 0.33 - . g84 6_related_000127F AUGUSTUS transcript 42096 42975 0.33 - . g84.t1 6_related_000127F AUGUSTUS stop_codon 42096 42098 . - 0 transcript_id "g84.t1"; gene_id "g84"; 6_related_000127F AUGUSTUS CDS 42096 42248 0.92 - 0 transcript_id "g84.t1"; gene_id "g84"; 6_related_000127F AUGUSTUS CDS 42343 42975 0.36 - 0 transcript_id "g84.t1"; gene_id "g84"; 6_related_000127F AUGUSTUS start_codon 42973 42975 . - 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MHQIRVALRGKGVVLMGKNTMVRRALRSILSEYPQYERLLPHVKGNIGFVFTSGDLKEIREVILSNKVAAPARAGAFA # PKDVTVPAGNTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGTRVGSSEATLLNMLNISPFTYGMTVVQIFDSGNSFSPDVLDVDESELIDRF # LTGIKTIAAISLAINYPTIVSVMHTLVNSYKNLIAVKEYLENPDAFAVAAPVADASSAPAAEAAVEETKAEEAEESDDDMVSHFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g84 ### # start gene g85 6_related_000127F AUGUSTUS gene 47173 47853 0.65 - . g85 6_related_000127F AUGUSTUS transcript 47173 47853 0.65 - . g85.t1 6_related_000127F AUGUSTUS stop_codon 47173 47175 . - 0 transcript_id "g85.t1"; gene_id "g85"; 6_related_000127F AUGUSTUS CDS 47173 47853 0.65 - 0 transcript_id "g85.t1"; gene_id "g85"; 6_related_000127F AUGUSTUS start_codon 47851 47853 . - 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MGQFFANAFRPLSARSRRESYSSLSSLVHSVASSVSNHNSATPTPRGDSTPSSVIHSADLLEQVAPFSRFVYGNSSPL # PFDTSPSEVITPAANQLPSHNEHGSSQVKRSFSSSSRKQSKTNILERNPRRASTSAPPVPPDSSPYNAPREHVSTPSKWRFFPFLYHNSTSSSSTDII # STPPTDISINVPRRGDLVCLSYDTLNDKSMRRLEGRSDHRPVIGSYAVYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 6_related_000127F AUGUSTUS gene 47994 49106 0.37 - . g86 6_related_000127F AUGUSTUS transcript 47994 49106 0.37 - . g86.t1 6_related_000127F AUGUSTUS stop_codon 47994 47996 . - 0 transcript_id "g86.t1"; gene_id "g86"; 6_related_000127F AUGUSTUS CDS 47994 48958 0.57 - 2 transcript_id "g86.t1"; gene_id "g86"; 6_related_000127F AUGUSTUS CDS 49082 49106 0.37 - 0 transcript_id "g86.t1"; gene_id "g86"; 6_related_000127F AUGUSTUS start_codon 49104 49106 . - 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MFNDTWFIHLTDKFDYTFVFGDLNFRLDISRLHADWLISRQGNSSKVVFIQSGIYPTSDYAQALAFDQLKNLMEHGRA # FVGFSEGVIMFPPTFKYDVMRTLKRNKHRSGHRPGQLRYPHEKARRLTEVDEKELDTVEHELRIDDEDGDQESDGEDEDREEDPDAEGEGEEESTSLA # SSIWTSMHSKAITEQQPDESYFSSTPNMMRSASAPGSRASLSLAAHKAKTKWRSLLSPTAPSSPTKWLKKPPFLEQQQNLLTRLQKRKTQQSVEDLKL # GGSEPEISPDAASSHTAQRSRVNSSKSQVPSDDDDVSQEDKGVYDSSHKRRVPGW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 6_related_000127F AUGUSTUS gene 52899 54682 0.2 + . g87 6_related_000127F AUGUSTUS transcript 52899 54682 0.2 + . g87.t1 6_related_000127F AUGUSTUS start_codon 52899 52901 . + 0 transcript_id "g87.t1"; gene_id "g87"; 6_related_000127F AUGUSTUS CDS 52899 53030 0.2 + 0 transcript_id "g87.t1"; gene_id "g87"; 6_related_000127F AUGUSTUS CDS 53195 54682 0.5 + 0 transcript_id "g87.t1"; gene_id "g87"; 6_related_000127F AUGUSTUS stop_codon 54680 54682 . + 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MLTLLQISCAPDRYPIRVIRGHTLHSRYAPSWGYRYDGLYRVAKRQKGQPPLPQPTAGSPTTLHSQRPKQYSHSHSSS # DNESETAEVKSFTSRRTNSPSSDGTHIQNYRRQDHEPEVIEIDDSEKADSVKGSPSNSTFSGVDSNENEQEAFENDSEYVSEVDQKQEEESDVLGEEP # AAIPNNEPLSSAATSRKRKRISVLRCSSDEDLPLERKRRQRRLVPSSSPVLGTDEDAISLFSDDENRRIGATIGISIPRTKKLPHPAPQKINSRRSLP # LNPISLLSTRGGKLDTPDRQEGILGESHVLHALHSSSKIGVAPSLSSPSDAASSVARNDNPLPTVNPPPMSVSLSASATVPEATLVSDNSAYQTSVSG # IITSSMAQSPLQLVSSRTETARSISPPASLPDVPIASYDPSAPQSSTVSSRAPLASHNLASSSRLRSYENPDMLSLSVPTTSSNKAVVSVNSASPNLD # PITSLPSELRPVPMGPPLSSVSSIPYPGLQLLEHQPQTNLSKFDWSGLLHDLYMIQAEETRMRPSGVTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 6_related_000127F AUGUSTUS gene 55360 57005 0.48 - . g88 6_related_000127F AUGUSTUS transcript 55360 57005 0.48 - . g88.t1 6_related_000127F AUGUSTUS stop_codon 55360 55362 . - 0 transcript_id "g88.t1"; gene_id "g88"; 6_related_000127F AUGUSTUS CDS 55360 56877 0.68 - 0 transcript_id "g88.t1"; gene_id "g88"; 6_related_000127F AUGUSTUS CDS 57000 57005 0.48 - 0 transcript_id "g88.t1"; gene_id "g88"; 6_related_000127F AUGUSTUS start_codon 57003 57005 . - 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MSNKRHSLSAASNASPSRSSSVVSNITGDSAKEEVKEKREWPPKSAAIPDSSSPLAPPAPIYGSAFWSRPKTAAAADS # PSNITSEIGKTSTNVSSSPTDRPEPNVPAEPPSSPTPQPQAVAPAVQSPRATKTAARTTVKHAATPRSSMTPINLQHTGQSMTSTSSPKPKVVPSTPK # SSRSSGVPTTPSSIRPKTPGSVAAGRPKTPAIHANRPKTPSSTTPASRPKTPSSGLFAPTAASLARARTGPPQPPAPTRKVTLSSAAAERLSKPTAAS # LSKARSAPPVTQVRGTPSTRGGTNAAKGGVKSKTAATTTFAKKAAPASTTDQFSARKSPHHGNGEVSHEEKEVRDASAEEIQHTEEPAETNQDDPHDG # AEAHEEKMHEDDVEIHVEELREEGDPIVESEAQSEAKPLEESSPSEHGSASQSGPSPAPSTHHLDESSPDYDTSSAGGEAETLSVGNASDIPPPSQEE # GNDIEDMVNLLEFVKPRPISMANIPDELDVHEIPDEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 6_related_000127F AUGUSTUS gene 57499 57936 0.5 - . g89 6_related_000127F AUGUSTUS transcript 57499 57936 0.5 - . g89.t1 6_related_000127F AUGUSTUS stop_codon 57499 57501 . - 0 transcript_id "g89.t1"; gene_id "g89"; 6_related_000127F AUGUSTUS CDS 57499 57936 0.5 - 0 transcript_id "g89.t1"; gene_id "g89"; 6_related_000127F AUGUSTUS start_codon 57934 57936 . - 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MTSADDFHLISWKNFLGLSAIVLGVMIPVGLRYWFKRGGVTADIEEQDEDTPSSAMTPTPRSAANGAVFLYDEEEEEQ # EDQILAAGATRLANKSKDADSRTQLLASEDDIDEDDYTSEDDDGDIILEAGPSLNDSESKLPKLVDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 6_related_000127F AUGUSTUS gene 58518 58904 0.61 + . g90 6_related_000127F AUGUSTUS transcript 58518 58904 0.61 + . g90.t1 6_related_000127F AUGUSTUS start_codon 58518 58520 . + 0 transcript_id "g90.t1"; gene_id "g90"; 6_related_000127F AUGUSTUS CDS 58518 58904 0.61 + 0 transcript_id "g90.t1"; gene_id "g90"; 6_related_000127F AUGUSTUS stop_codon 58902 58904 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MPKNIHSQVDYTLTHSSRVGSASHSVIPKIAVLTTNIAAIFNVAFRISFRDDLDVPGDRGIVEPYEGVEGVRSGAWGE # FSSSWRSLTVAKVYTEELAVRLRFNGEGVMIGEACSLKFENLVWTMDSRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g90 ### # start gene g91 6_related_000127F AUGUSTUS gene 61260 62638 0.37 + . g91 6_related_000127F AUGUSTUS transcript 61260 62638 0.37 + . g91.t1 6_related_000127F AUGUSTUS start_codon 61260 61262 . + 0 transcript_id "g91.t1"; gene_id "g91"; 6_related_000127F AUGUSTUS CDS 61260 62561 0.78 + 0 transcript_id "g91.t1"; gene_id "g91"; 6_related_000127F AUGUSTUS CDS 62618 62638 0.37 + 0 transcript_id "g91.t1"; gene_id "g91"; 6_related_000127F AUGUSTUS stop_codon 62636 62638 . + 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MPSSPSKAPTAAGPSRLPLPRSSSGREVASDGEVEQDQLAFTIESPSLPQLQLFENIFNTGKSLAVYCRDDPLWPILA # AVALPCSNCTKHPETCKVPEGSPRCSFCTGKKTCSLGKLLRYRYFARRCNQDLAYSRRFLELHGTPAQRVSWTIPEDVWHRYDELLHSSTSATKVLVE # LNMLDDQDSQAVDRSELRRFQEAQEQEALLAARRKRVNASPPPKVRSKKRRLTKVVEEPVIEEVPRLVRLVIPPSRPAPSAPGSAPSTFARSSAALPL # TSVQATGQLGSVQGPSPLARLADLVDQQTDSQAEASTRSLGPGSSPIKASLGDSNLPKMSPVVRPPLVPRILSQHPYRVENERLAARIRLLESQLASS # RQENATLTSTLRDTSVSLEARQGELDQLRESVSSAAQQQELYDRLLDQVQTLKRALPGPPNEWIGFGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 6_related_000127F AUGUSTUS gene 63192 64154 0.48 + . g92 6_related_000127F AUGUSTUS transcript 63192 64154 0.48 + . g92.t1 6_related_000127F AUGUSTUS start_codon 63192 63194 . + 0 transcript_id "g92.t1"; gene_id "g92"; 6_related_000127F AUGUSTUS CDS 63192 64154 0.48 + 0 transcript_id "g92.t1"; gene_id "g92"; 6_related_000127F AUGUSTUS stop_codon 64152 64154 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MIREYPDEGSYSVSLPPLAEVQGDLNDTLASLRRVSTFAHRLYRCDPASVLHQHNRYVGVIIDAVISFLRRGLDTSDK # DVLARNFQLALQYLEAAHFIHAELHLRSLSSIQWFFANAAEREEGIYRLILAHSRFSDDAPFLNVAQHAGFVAPFDDSLEPPLHRRMFALDTALPHHG # AGNWEDLVPALPSLDRLTQEWEAMMSSYIRFVTDTPLPPVDLQEEGSADHEEVSVLQEGESGGTAAVPLFLPDSLSATPVASAASPSPLPPRFGSVAN # LAIDMTADEDEEDIYESSGSVERRNRVEGNPGGDDPMEGAPVGQGQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g92 ### # start gene g93 6_related_000127F AUGUSTUS gene 64403 65380 0.93 - . g93 6_related_000127F AUGUSTUS transcript 64403 65380 0.93 - . g93.t1 6_related_000127F AUGUSTUS stop_codon 64403 64405 . - 0 transcript_id "g93.t1"; gene_id "g93"; 6_related_000127F AUGUSTUS CDS 64403 65380 0.93 - 0 transcript_id "g93.t1"; gene_id "g93"; 6_related_000127F AUGUSTUS start_codon 65378 65380 . - 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MPSDITSDRGSLFVSQFWRELCRVLGIEARLSTAYHPQTDGQTERVNQSVEAYLRIYCAYDQDDWDLLLPIAEFVYNN # TPNTTTGVSPFFANKGYHPKLSITLERVQGAEVNEYASNLKELHTYLQGRIRVANEAYAKYANQKRQDAPDWKEGDHVWLNMENVRTRRPMKKLDHKW # TGPYSILAKIGSHAYRLDLPGDLHKIHNVFHIDRLKPHFHDKFKRRNSPPPPVFIKGKTEHFVESVLDSKPIRGRPEEIEYLVKWEGYGDEFNSWVEW # EGMVGSIELLRDWHQQHPRKRQPSRLHWASLEREAQEDEGEDREDSRERSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g93 ### # start gene g94 6_related_000127F AUGUSTUS gene 65743 67991 0.63 - . g94 6_related_000127F AUGUSTUS transcript 65743 67991 0.63 - . g94.t1 6_related_000127F AUGUSTUS stop_codon 65743 65745 . - 0 transcript_id "g94.t1"; gene_id "g94"; 6_related_000127F AUGUSTUS CDS 65743 66579 0.96 - 0 transcript_id "g94.t1"; gene_id "g94"; 6_related_000127F AUGUSTUS CDS 66681 67991 0.66 - 0 transcript_id "g94.t1"; gene_id "g94"; 6_related_000127F AUGUSTUS start_codon 67989 67991 . - 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MERVTPKPTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYPDLPTLDIESLNIPKIPSRSGLTPKGSIR # RNNFRRKQLIAGTHVVERKSDPTVQGKPISLIGAAGMDRLLREGTPAYFLHISPTKEESPTEEMLRASDSSATEGVQQPKDPESGDPSSEQGGVVKEL # DKEESKRQETEELKRSIPVQYQDYLDVFSPGEARTLPPHRPYDIKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAK # KKDGTLRLCVDYRALNKITKKNRYPLPLIGTLVDQLRKAKIFTKIDLRAGYNNVRVAQGHEWKTAFRTRYGSFEYLVMPFGLTNAPSAFQFFMNEIFH # DMVDVCVVIYLDDILIYSDDEVSHVEHVRKVLERLRANHLHAKPEKCAFHVDTVEYLGVIISPLGEVHRQLLGITKVFTKLLRKDSVWNWTPQCSSAF # ELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDH # NNLQYFTTTKQLTARQARWAELLSGYDFVINYRPGRLGAKPDALTRRSDVYPKKGASRDQVLAGRERVLIPPERLNATILMNEDLLVNRVREAPKDTS # VIEALKRIARNEEESLVWEDGLLKREVVYMSQTLEHYEGRSYSRTTIIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g94 ### # # ----- prediction on sequence number 5 (length = 82561, name = 6_related_000126F) ----- # # Predicted genes for sequence number 5 on both strands # start gene g95 6_related_000126F AUGUSTUS gene 2797 3357 0.51 + . g95 6_related_000126F AUGUSTUS transcript 2797 3357 0.51 + . g95.t1 6_related_000126F AUGUSTUS start_codon 2797 2799 . + 0 transcript_id "g95.t1"; gene_id "g95"; 6_related_000126F AUGUSTUS CDS 2797 2844 0.51 + 0 transcript_id "g95.t1"; gene_id "g95"; 6_related_000126F AUGUSTUS CDS 2923 3357 1 + 0 transcript_id "g95.t1"; gene_id "g95"; 6_related_000126F AUGUSTUS stop_codon 3355 3357 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MTARNSRKIGTLILYLDLIFLGQLEHGAYEDCLDVHVDLLNRCYGVHGKPIERQTHQTGAGHPADEEETLGTEEGKEW # HGIHGETDTDNEEWAGIVDNHDLDDEDDEDNDSSDEDENSVNSEDKEDKNGVNSEDENSGNDENDEDEWLGIQWYFGGSTVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 6_related_000126F AUGUSTUS gene 11004 12303 0.09 + . g96 6_related_000126F AUGUSTUS transcript 11004 12303 0.09 + . g96.t1 6_related_000126F AUGUSTUS start_codon 11004 11006 . + 0 transcript_id "g96.t1"; gene_id "g96"; 6_related_000126F AUGUSTUS CDS 11004 11486 0.35 + 0 transcript_id "g96.t1"; gene_id "g96"; 6_related_000126F AUGUSTUS CDS 11570 11936 0.43 + 0 transcript_id "g96.t1"; gene_id "g96"; 6_related_000126F AUGUSTUS CDS 12050 12303 0.21 + 2 transcript_id "g96.t1"; gene_id "g96"; 6_related_000126F AUGUSTUS stop_codon 12301 12303 . + 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MKARKGSKKYTKQSLGQKKPVHISSRSASEDNSQKSEDEATDYNPTALSAFHKFANAAGDGDEANNLVKSLTSLPMLR # SPAIKDHLGSDGDFTAAEEETKRGLLRKGIRKLKPPTKGKQRAVPLMFYIVRCFTKNTVHFPEYAYICNRICISSDPRVTRSCISGKNIDLAEGSENV # DQLTMSALQRAKRRGVAAINSKDGFMIDKNWTSEQTRQFLSEQLPLLMNHIEHLEAKSNHSMLYTCTRVGGRWGGIGLTGGKVPDGETIFQNTRKSKS # GTAGTVLLLAEDKEGSDDNGDDIAFASEGKVSEEDEDLSGDELKGIPRHNFGHRRHRSITPESDDEGLKDHGSKRRKLSKRGLVYYLLSVPFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 6_related_000126F AUGUSTUS gene 13734 14390 0.87 + . g97 6_related_000126F AUGUSTUS transcript 13734 14390 0.87 + . g97.t1 6_related_000126F AUGUSTUS start_codon 13734 13736 . + 0 transcript_id "g97.t1"; gene_id "g97"; 6_related_000126F AUGUSTUS CDS 13734 14390 0.87 + 0 transcript_id "g97.t1"; gene_id "g97"; 6_related_000126F AUGUSTUS stop_codon 14388 14390 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MKGSRSLILSCFLAFALVQSTRAAHEAKLVARIDILGTGTDATTSAAATTSDTSTSSSSSSATSATATSNTASSTAPP # TSTTSSTTATSATPTSATTPTSTGETSQTSAQSTAGNTQTSATAAPTRSVVTSTAANGETVIVTQTIPASSATSASASSSATSGADNSSDDDSSGLST # GSIIGLSVAGGVALLGIISFFVWKFTRKRFSDYDDSESYEII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 6_related_000126F AUGUSTUS gene 15693 16668 0.25 - . g98 6_related_000126F AUGUSTUS transcript 15693 16668 0.25 - . g98.t1 6_related_000126F AUGUSTUS stop_codon 15693 15695 . - 0 transcript_id "g98.t1"; gene_id "g98"; 6_related_000126F AUGUSTUS CDS 15693 15977 0.71 - 0 transcript_id "g98.t1"; gene_id "g98"; 6_related_000126F AUGUSTUS CDS 16118 16342 0.57 - 0 transcript_id "g98.t1"; gene_id "g98"; 6_related_000126F AUGUSTUS CDS 16552 16668 0.35 - 0 transcript_id "g98.t1"; gene_id "g98"; 6_related_000126F AUGUSTUS start_codon 16666 16668 . - 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MQFCLSHPTEGYYMKSANNIFGTQGDFITSPDISQIFGEVITTISKKLSQPLAVQVHLVETSLFLREIQSRRLSVAPT # SVQWHESIDHITPSDDSFTMLVAHEFFDALPVHVFRHVLSPETTAISNIFGNSSSRFQSLPVGSDLEVSPTSFRLARKVGELLAKRETPTSSSPGGCG # LIIDYGRDHAFGSSRRVSLILDWRMLRILTTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g98 ### # start gene g99 6_related_000126F AUGUSTUS gene 22543 24075 0.86 + . g99 6_related_000126F AUGUSTUS transcript 22543 24075 0.86 + . g99.t1 6_related_000126F AUGUSTUS start_codon 22543 22545 . + 0 transcript_id "g99.t1"; gene_id "g99"; 6_related_000126F AUGUSTUS CDS 22543 24075 0.86 + 0 transcript_id "g99.t1"; gene_id "g99"; 6_related_000126F AUGUSTUS stop_codon 24073 24075 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MHPSRLPRSTKIAKRLSTTFRKPSSQSLQHSSRVPVPSAHSRQLREAALRERGLLPPKDMSALEREQDNLLPLSPIPQ # VAYADGPSEAERIKQAWEVKIQSNDPADSKWSPSSASKNVDQPLKSDPANGSLDLVAVREGSTPPSSPKPPPSIRKSSSRAHLAQLKAPPTRELPPTP # IDPESIPLPPSPLEDIFDSVEILSRETSPLSLSPANISHTSPDEVDLHLSSAPSGLSPTPPRALSPPPSSTDKHSEEGAQAPPKSQSDSRPTRPSVVI # NSCSDSDESGSIATPSLDTSSQLTSESSLSHAVHKSKPVPLVKTWANEPSVPVIVESPIEGHTLVNSMDDNPINDIPEDETNHTGAPLLRVDLHSPNE # KRKPPSDKGSTLSPKISSDKQAGGKMSRSNSLANFRQSVVSTLSRKPSSFKKPISFKFDGMNLPPSPTVPASLAGQSINSSMSTQSVKSKDSLSHTVP # VPVPRQALSPKIHSRGSILLEASHIEDEETRRMTEMAFMG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g99 ### # start gene g100 6_related_000126F AUGUSTUS gene 24965 26424 0.5 + . g100 6_related_000126F AUGUSTUS transcript 24965 26424 0.5 + . g100.t1 6_related_000126F AUGUSTUS start_codon 24965 24967 . + 0 transcript_id "g100.t1"; gene_id "g100"; 6_related_000126F AUGUSTUS CDS 24965 25180 0.99 + 0 transcript_id "g100.t1"; gene_id "g100"; 6_related_000126F AUGUSTUS CDS 26047 26424 0.66 + 0 transcript_id "g100.t1"; gene_id "g100"; 6_related_000126F AUGUSTUS stop_codon 26422 26424 . + 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MYEKTIKVLSELPTPPIELKKECEVNLARARKAVVPWTGRPENGIEVKIDSGLLPWQAAEKILSKSSVVSRSASARVG # IENLELLETIFEEADALLQDLEKNPYDPNDFDHSDPGFNLSFFGNIKGNAFAYVIQLKIYFLSHQNLRSSKALYHNMLGNFGKDQKVETVRKHYTSAM # ELYILAAACLPEDDENHPCKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 6_related_000126F AUGUSTUS gene 30474 31582 0.4 + . g101 6_related_000126F AUGUSTUS transcript 30474 31582 0.4 + . g101.t1 6_related_000126F AUGUSTUS start_codon 30474 30476 . + 0 transcript_id "g101.t1"; gene_id "g101"; 6_related_000126F AUGUSTUS CDS 30474 30546 0.4 + 0 transcript_id "g101.t1"; gene_id "g101"; 6_related_000126F AUGUSTUS CDS 30861 31582 0.98 + 2 transcript_id "g101.t1"; gene_id "g101"; 6_related_000126F AUGUSTUS stop_codon 31580 31582 . + 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MSSSIVRVPMNLPSRSLGCEESTSTQLICSSSASIFGAKPNNPPATGSSLFGQPNTTGNSIFGSSQPQTNTSTANSSF # GGSNAFGQQNQQQQQPAGSLFGQTQQQPATGGSIFGQPAAGGSIFGQPAQKPAAGSSLFGQSTQQQPAATGTSLFGQPAVQPTGNLFGQPAQQPATGS # TNIFGQSTQQPSTGVGGSLFGQSTQQPAANTSIFGQSTQQPAPGASIFGQPAQATQSAGGTSLFGQPAQQQQQGTSTFGGGGAFSCSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g101 ### # start gene g102 6_related_000126F AUGUSTUS gene 32905 35127 0.43 - . g102 6_related_000126F AUGUSTUS transcript 32905 35127 0.43 - . g102.t1 6_related_000126F AUGUSTUS stop_codon 32905 32907 . - 0 transcript_id "g102.t1"; gene_id "g102"; 6_related_000126F AUGUSTUS CDS 32905 35127 0.43 - 0 transcript_id "g102.t1"; gene_id "g102"; 6_related_000126F AUGUSTUS start_codon 35125 35127 . - 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MTSQMPPPLDGSSDSISHSSVRNRRNLRSLIANSASRTKSLPPGVQRNTLPTGAVARPPVLPLSSAQADSSQSQTFSA # SQTRPKSTSVSVTSSARPSPRFHVTNPTELPPSTNPNKVSAAKSHELNRPLPAPVFSTGSGSEGNVARKQSGPPSPPRINTTGLHLQSPPLSAASNCS # PFPSESNSTASSTSSSTSFTPKRMSKVILPIGPTHVPAPLPLHDASFHNERTTPVSALSSPSGGTRSVVRPLPPPPSLPKLVGASLAGPRPRSSSRGA # SSKVRSRTNSAVGRGDAISRPQLSFDPTSSSYVIKTANEVNGQFSTIASGVESIKSGSRSRSARMHTHNRSHSAQTKNFSSMILHDVRDIRDTSSSVS # SSNDHSVVTRKSKQVVRSAPCSDTEEGSSSLSKSVRIRQTRQKLVLHNPSSSMTVRSAPTSDTEDSPTYELTSSPLLLPPTGSIKDMLPKPLTIRTDN # ILQPLPTRPAFLSTQSNPIEPLTIVRRISPPNPAQGSTFKLTSPPLPSLTEDIGYADAGFVDDSRVYADDGFDGPGGLGAFSTSVDPDVDLDIGEMVF # NSRPPSGEFMGPSVMDLDMDARGRHASRPTPVPRWKSADSHATNADLQRDEHGKHADTKSRHNASRGSRSASQAVIMSSFKAHVHVHPVHELELGPSP # INMDLEPEMVFSKNPRSFTPLGSVPGVLDMGERRYIRGKWRSPSPVTPTGAVPPRNPAAGQFAPVRARGFYEDW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 6_related_000126F AUGUSTUS gene 37380 38902 0.21 + . g103 6_related_000126F AUGUSTUS transcript 37380 38902 0.21 + . g103.t1 6_related_000126F AUGUSTUS start_codon 37380 37382 . + 0 transcript_id "g103.t1"; gene_id "g103"; 6_related_000126F AUGUSTUS CDS 37380 37557 0.37 + 0 transcript_id "g103.t1"; gene_id "g103"; 6_related_000126F AUGUSTUS CDS 37669 37688 0.29 + 2 transcript_id "g103.t1"; gene_id "g103"; 6_related_000126F AUGUSTUS CDS 37778 38902 0.58 + 0 transcript_id "g103.t1"; gene_id "g103"; 6_related_000126F AUGUSTUS stop_codon 38900 38902 . + 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MPVSEIIKHSDGVSVKEEVKVEVKMEVKAEMKTEVDIQGVKVEREVIDLTEDLDDEPKTFDEVKSLKDGLIQALKRHA # HSQGNLSTMMRPHAKQRSPRQTQLSFCPGASSSITQEARLQHMAVQKLGICGIITFMNVCVLNSNTGSCLRVNPEFHNLLQRLDIIFYRRCVYNVFNL # RFLMGPSSFIFYSTSIPETVFLNSFLTVFKKRVYPAVTSARSTIWPTRDAYLDYEEGLKLQAIFDSILEDTIVKPKGSIIPVGSNTQFRMPTSSQTKL # VKESINGAVKMEQDRQGQEVTVKPEYDFEMVDLSTILGPEFRFEFDEDDQDSQPKASLEKCKAAARVVAIYDAVLKSKWDFCVSVTNDKLEESREPSL # QRFEQGEQILLFCDMLLIPSPCRLRPRSPYLEGDGSLCSTPQIRKRARSPSITVGTKVLASSQTREVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 6_related_000126F AUGUSTUS gene 39167 40683 0.28 + . g104 6_related_000126F AUGUSTUS transcript 39167 40683 0.28 + . g104.t1 6_related_000126F AUGUSTUS start_codon 39167 39169 . + 0 transcript_id "g104.t1"; gene_id "g104"; 6_related_000126F AUGUSTUS CDS 39167 39407 0.63 + 0 transcript_id "g104.t1"; gene_id "g104"; 6_related_000126F AUGUSTUS CDS 39682 39878 0.42 + 2 transcript_id "g104.t1"; gene_id "g104"; 6_related_000126F AUGUSTUS CDS 40192 40683 0.96 + 0 transcript_id "g104.t1"; gene_id "g104"; 6_related_000126F AUGUSTUS stop_codon 40681 40683 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MKVSVDDRHTYDVQLQDANDICVFAHRAQNATWTGERSAPRWKARAKEGIITNWLVRDGFAYASDESEEVEEPVLKPV # SRYIPGAFETPYQIAPLDLVEDSFYYARKELIKSRLKELKDGDALKILDRHDKLYRESKTWCVGVRWDLWFDTLLGAGLDVDLCRVLEENTKNVNAEK # EKRDQRIAREEKARIKQEKTAKGTKLEQRKRRKAKREESDSDNADELDMDMDVNADDEADFRGPENVDELDPSPPVTRMKRRRSLEDGEGERDSESRP # SVLATLQDKIAFPEWFSVPIVDIPHAKRLKTCEGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 6_related_000126F AUGUSTUS gene 41266 42237 0.64 + . g105 6_related_000126F AUGUSTUS transcript 41266 42237 0.64 + . g105.t1 6_related_000126F AUGUSTUS start_codon 41266 41268 . + 0 transcript_id "g105.t1"; gene_id "g105"; 6_related_000126F AUGUSTUS CDS 41266 42237 0.64 + 0 transcript_id "g105.t1"; gene_id "g105"; 6_related_000126F AUGUSTUS stop_codon 42235 42237 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MLEYGEANHWDTMTLHSAIDYTVRTATSLKDFVTEKVNGAPTTVKEVKTIAEKTAHDAKAATIRTIAASKERVKDVAA # HVKTDVQKGEDKVTGKAAAIAKHQSEELIEGLSDLVKKAEEALALKPGSSSNPPGAPTENESTPEFKTTDVYEAPLPVGFEPPPGFSRPPTPKKEPPP # PKYVDLPLVAPAVSDLASSEPIISHLAGTIDNLASFLKSNPEAASRVTDVLDLAKADLSSLAQRIEGAKEEERKGLETMLDEQTREYTLKLLEVEMEA # QDRLDNQEEEFRKLFDLRQSQLVQTYRQKLEEELKTQTDLINERYVATL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 6_related_000126F AUGUSTUS gene 42337 43011 0.74 + . g106 6_related_000126F AUGUSTUS transcript 42337 43011 0.74 + . g106.t1 6_related_000126F AUGUSTUS start_codon 42337 42339 . + 0 transcript_id "g106.t1"; gene_id "g106"; 6_related_000126F AUGUSTUS CDS 42337 43011 0.74 + 0 transcript_id "g106.t1"; gene_id "g106"; 6_related_000126F AUGUSTUS stop_codon 43009 43011 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MRVEEERGGRLAKIDELSTQLKRIERVALDNSAYLDENIRIHALWSAIRALSSSALSSHVRKPFREELRVVRHISAAR # EDPVVSAALETLETSEIPDIGVEPFADLASWYTTSVAPKVSTVALVPDQDAGLLSHLASHLLSSFRFKRHGLVEGNDVLSVLSRAEYYLNEKDLDSAT # RELNQLSGTAKVMLNDWLEAARKRLEVEQALEVSRLHRACRWTPLTQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # start gene g107 6_related_000126F AUGUSTUS gene 51351 51848 0.52 + . g107 6_related_000126F AUGUSTUS transcript 51351 51848 0.52 + . g107.t1 6_related_000126F AUGUSTUS start_codon 51351 51353 . + 0 transcript_id "g107.t1"; gene_id "g107"; 6_related_000126F AUGUSTUS CDS 51351 51848 0.52 + 0 transcript_id "g107.t1"; gene_id "g107"; 6_related_000126F AUGUSTUS stop_codon 51846 51848 . + 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MLSNLLQELALARDHGRKRIVLDEARLTENPVDRLSRMIKNSFWHSLTRRIDGEGLEIICADPKNRTGRVNPRIYVPH # GEPAMADYYRKVAREKPHLNLDVQVLPVKPDDPSFVKSLNNKPGILALAMNESDDGRGGKILKGIPFIVPGARFNEVRTSPCSCRSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 6_related_000126F AUGUSTUS gene 52042 52848 0.95 + . g108 6_related_000126F AUGUSTUS transcript 52042 52848 0.95 + . g108.t1 6_related_000126F AUGUSTUS start_codon 52042 52044 . + 0 transcript_id "g108.t1"; gene_id "g108"; 6_related_000126F AUGUSTUS CDS 52042 52848 0.95 + 0 transcript_id "g108.t1"; gene_id "g108"; 6_related_000126F AUGUSTUS stop_codon 52846 52848 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MALQIFNQLDRSDVDANRAWLKRAIQAAIKEYHTIWVAEPRIDPKTGLSRYRPAGLGIPPETEATHFTHILEPFAHKH # GLSILEFSEKYNDGVLKEPELDEYFLHDRAVRESGHDTTYRFEKRCANLATIDLQALLYKYEIDIGTAIREVFDDELELEEEFPLAPFPITPAAYAKT # TRESSKGRSQSSDEWFKRAEFRKQMIDKYLWNDNKSLYFDYDTAKEQQILYESVTALWALWAGCASEEQAWKLVYVPFWFNHFPSQFSYICL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 6_related_000126F AUGUSTUS gene 57215 59173 0.14 + . g109 6_related_000126F AUGUSTUS transcript 57215 59173 0.14 + . g109.t1 6_related_000126F AUGUSTUS start_codon 57215 57217 . + 0 transcript_id "g109.t1"; gene_id "g109"; 6_related_000126F AUGUSTUS CDS 57215 57422 0.53 + 0 transcript_id "g109.t1"; gene_id "g109"; 6_related_000126F AUGUSTUS CDS 57480 57884 0.27 + 2 transcript_id "g109.t1"; gene_id "g109"; 6_related_000126F AUGUSTUS CDS 58626 59173 0.92 + 2 transcript_id "g109.t1"; gene_id "g109"; 6_related_000126F AUGUSTUS stop_codon 59171 59173 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MRMVSSKDLDVFASLRGKESSAVALKATTSSPPLEIQSSTSVSKALVAPPRLIRRNRELENLKADASSLFASPRSARS # KDSDNKLLSGFPLVDAAPRASSSTKVPVGRKELKSKTTVKVVEDSKASDPPTSALVYERVRLPPRSRKIAPAASKGKARQVVVTEEDSTSNEVESEDE # DEDEDTAPPPKRLKTTSSISGNILFFIFYLAISLRRAIDLNDQLKQLESLFNSTRDLFLRSVLDLQNAGEDPIVVLEALKAAEPNRRAISLNEWTLMA # TLFRWPSPFNLSGLDFDNRTPGEWINLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGASSQVGGSIPMELDLPAIESLAEP # ALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 6_related_000126F AUGUSTUS gene 60248 61702 0.33 + . g110 6_related_000126F AUGUSTUS transcript 60248 61702 0.33 + . g110.t1 6_related_000126F AUGUSTUS start_codon 60248 60250 . + 0 transcript_id "g110.t1"; gene_id "g110"; 6_related_000126F AUGUSTUS CDS 60248 60415 0.53 + 0 transcript_id "g110.t1"; gene_id "g110"; 6_related_000126F AUGUSTUS CDS 61058 61193 0.87 + 0 transcript_id "g110.t1"; gene_id "g110"; 6_related_000126F AUGUSTUS CDS 61275 61702 1 + 2 transcript_id "g110.t1"; gene_id "g110"; 6_related_000126F AUGUSTUS stop_codon 61700 61702 . + 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNSPDKATISVLRWSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKS # RQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 6_related_000126F AUGUSTUS gene 65967 66485 0.56 + . g111 6_related_000126F AUGUSTUS transcript 65967 66485 0.56 + . g111.t1 6_related_000126F AUGUSTUS start_codon 65967 65969 . + 0 transcript_id "g111.t1"; gene_id "g111"; 6_related_000126F AUGUSTUS CDS 65967 66485 0.56 + 0 transcript_id "g111.t1"; gene_id "g111"; 6_related_000126F AUGUSTUS stop_codon 66483 66485 . + 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MQLDGLGALFDQARQSFLRSFLDLQQAGQDPIVVLEALKAAEPQRESISVEDWTLLATLFQWSSPFNLNGLKFDNRTP # AEWIDLLRSIHSGATSATVTVDGHLVDTSQPPEAAVEVSEALDPQGSLPNTVVEKASGVEDLASLSEGSPIQTELDLPQIESLTESALAPEKGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 6_related_000126F AUGUSTUS gene 67603 69056 0.45 + . g112 6_related_000126F AUGUSTUS transcript 67603 69056 0.45 + . g112.t1 6_related_000126F AUGUSTUS start_codon 67603 67605 . + 0 transcript_id "g112.t1"; gene_id "g112"; 6_related_000126F AUGUSTUS CDS 67603 67770 0.81 + 0 transcript_id "g112.t1"; gene_id "g112"; 6_related_000126F AUGUSTUS CDS 68412 68547 0.96 + 0 transcript_id "g112.t1"; gene_id "g112"; 6_related_000126F AUGUSTUS CDS 68629 69056 1 + 2 transcript_id "g112.t1"; gene_id "g112"; 6_related_000126F AUGUSTUS stop_codon 69054 69056 . + 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKS # RQDSGSDSSVSDASFATAQSIPTTGSEDTIVTPTEMAVPVPKAVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 6_related_000126F AUGUSTUS gene 69464 73172 0.3 - . g113 6_related_000126F AUGUSTUS transcript 69464 73172 0.3 - . g113.t1 6_related_000126F AUGUSTUS stop_codon 69464 69466 . - 0 transcript_id "g113.t1"; gene_id "g113"; 6_related_000126F AUGUSTUS CDS 69464 72925 0.64 - 0 transcript_id "g113.t1"; gene_id "g113"; 6_related_000126F AUGUSTUS CDS 73068 73172 0.43 - 0 transcript_id "g113.t1"; gene_id "g113"; 6_related_000126F AUGUSTUS start_codon 73170 73172 . - 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MIIGINLKTLKELGREWFDMKYSKEELNRSKDLNRQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDK # KVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFAPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVK # VPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTL # DLYVGYDERELDQLSRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRFVWE # HFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPF # EWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGC # RRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPELNPEDYVDEDGGEPINFIMGDGETEEPYQF # DDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATGEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLS # NPSDESLGEMPQDERIKFIRLIKKFQVDDQGRLYHRNTDQPDQPQLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRSCKE # CQNRQMKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWLEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAW # LEEKYGIKGLRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILT # RDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERRYRHTIKNWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIVEMDGT # VLKERSEPSEYCRISREMNQLNCQTISTNLST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 6_related_000126F AUGUSTUS gene 73662 75117 0.18 - . g114 6_related_000126F AUGUSTUS transcript 73662 75117 0.18 - . g114.t1 6_related_000126F AUGUSTUS stop_codon 73662 73664 . - 0 transcript_id "g114.t1"; gene_id "g114"; 6_related_000126F AUGUSTUS CDS 73662 74781 0.4 - 1 transcript_id "g114.t1"; gene_id "g114"; 6_related_000126F AUGUSTUS CDS 74861 75117 0.45 - 0 transcript_id "g114.t1"; gene_id "g114"; 6_related_000126F AUGUSTUS start_codon 75115 75117 . - 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MKEQDRSMRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLK # KPQSRSKIPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELAALSPAIRKIIMRKIRNRRVR # PRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHS # DHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPF # QVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDSEKSTGEHDSKGNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 6_related_000126F AUGUSTUS gene 75409 76080 0.42 - . g115 6_related_000126F AUGUSTUS transcript 75409 76080 0.42 - . g115.t1 6_related_000126F AUGUSTUS stop_codon 75409 75411 . - 0 transcript_id "g115.t1"; gene_id "g115"; 6_related_000126F AUGUSTUS CDS 75409 76080 0.42 - 0 transcript_id "g115.t1"; gene_id "g115"; 6_related_000126F AUGUSTUS start_codon 76078 76080 . - 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKV # EDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTT # PRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 6_related_000126F AUGUSTUS gene 76447 76647 0.66 - . g116 6_related_000126F AUGUSTUS transcript 76447 76647 0.66 - . g116.t1 6_related_000126F AUGUSTUS stop_codon 76447 76449 . - 0 transcript_id "g116.t1"; gene_id "g116"; 6_related_000126F AUGUSTUS CDS 76447 76647 0.66 - 0 transcript_id "g116.t1"; gene_id "g116"; 6_related_000126F AUGUSTUS start_codon 76645 76647 . - 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIHGSKLLKAYLNMEELHLTRLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # # ----- prediction on sequence number 6 (length = 40994, name = 6_related_000022F_1) ----- # # Predicted genes for sequence number 6 on both strands # start gene g117 6_related_000022F_1 AUGUSTUS gene 1723 3737 0.22 - . g117 6_related_000022F_1 AUGUSTUS transcript 1723 3737 0.22 - . g117.t1 6_related_000022F_1 AUGUSTUS stop_codon 1723 1725 . - 0 transcript_id "g117.t1"; gene_id "g117"; 6_related_000022F_1 AUGUSTUS CDS 1723 2354 0.93 - 2 transcript_id "g117.t1"; gene_id "g117"; 6_related_000022F_1 AUGUSTUS CDS 3076 3462 0.45 - 2 transcript_id "g117.t1"; gene_id "g117"; 6_related_000022F_1 AUGUSTUS CDS 3527 3737 0.47 - 0 transcript_id "g117.t1"; gene_id "g117"; 6_related_000022F_1 AUGUSTUS start_codon 3735 3737 . - 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MMRSVPSKDLDVFASLCGKGSLAGASKLNTPAPPLEIKSSTSVTKALIAPPRLIRRNWELESLKAEASTFFSSPRSTR # SRDSDNELLSGFPSVGSAPIASSSTKVSIGRKEPKSSTTVKVVEGSKASDPSMPAMVYKRVRLPPRSKKNTSIASKGKARQIIVTDEDSASNEVESED # EDEEEDTAPPPKRPKTTSSISGKNLANSLRRAADLNDQLKQIRSLFDTARELFLRSILDLQNAGEDPVVVLEALKAAEPNHQAINLNEWTILATLFHW # PSPFNLSGLDFDNWTPGEWIELLHSIHSGESTAHIDEHGHLVESSPPPNSATEALEGLNEVEKGSADEGSSSQVGGSVPMELDLPTIESLAGLPLKRG # QSKRRLLNCSWFLGASFLFLHTHTDGWVFQAQSSHHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g117 ### # start gene g118 6_related_000022F_1 AUGUSTUS gene 12291 13130 0.86 - . g118 6_related_000022F_1 AUGUSTUS transcript 12291 13130 0.86 - . g118.t1 6_related_000022F_1 AUGUSTUS stop_codon 12291 12293 . - 0 transcript_id "g118.t1"; gene_id "g118"; 6_related_000022F_1 AUGUSTUS CDS 12291 13130 0.86 - 0 transcript_id "g118.t1"; gene_id "g118"; 6_related_000022F_1 AUGUSTUS start_codon 13128 13130 . - 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MDNSEPPANTFGSWNTDLDKADPSAAGWGGMELDDITENLWGGDDADTWEIPPPPTLFPILGPTALPLTHTSGIVEWS # MRRIRYVVNPGDDNDSSAANVIASKFPSDGPSADAVESDFSSRLSKVVMEPWLDWETSGEEGDTASPQIKGTSRGSVKVYEKGQGVMYEYDSDVRSNA # FAAAPSPNGTSLPAHDPLKHTITLLVAPETAKLLRVGMGLGATWVQIARQTDLRNEQEVRETEIEGSGGESISSPDGSGDSDIHGRFWYLSNLLIVLP # SFHIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g118 ### # start gene g119 6_related_000022F_1 AUGUSTUS gene 13192 14720 0.14 - . g119 6_related_000022F_1 AUGUSTUS transcript 13192 14720 0.14 - . g119.t1 6_related_000022F_1 AUGUSTUS stop_codon 13192 13194 . - 0 transcript_id "g119.t1"; gene_id "g119"; 6_related_000022F_1 AUGUSTUS CDS 13192 13542 0.7 - 0 transcript_id "g119.t1"; gene_id "g119"; 6_related_000022F_1 AUGUSTUS CDS 13817 14097 0.19 - 2 transcript_id "g119.t1"; gene_id "g119"; 6_related_000022F_1 AUGUSTUS CDS 14528 14720 0.77 - 0 transcript_id "g119.t1"; gene_id "g119"; 6_related_000022F_1 AUGUSTUS start_codon 14718 14720 . - 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MESDSTAHRKFNFPPFPSAPEHVTIVPFRDFKDNGLKIQEDDYDGPEVDALNIPTVVIEKDMLGXLEDDADVEDDFDD # DEDLFSPDPKEITRRVEMSTERGERSSYQKKNPRPRPPYENYDKPPVAVQSQQEIDQLLQESRERKADRLNEFLNNPKERITKSLPWNDVFSGGCEEL # FDVRSKEQEMSALEWAQRNQGLFSDVESGENGVSSTAAATVASTPPAEEAKELELEVDIDIVTPTMEQNSDDVLETPTQQSESKIPKVNTSETDIHRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 6_related_000022F_1 AUGUSTUS gene 17403 18239 0.37 - . g120 6_related_000022F_1 AUGUSTUS transcript 17403 18239 0.37 - . g120.t1 6_related_000022F_1 AUGUSTUS stop_codon 17403 17405 . - 0 transcript_id "g120.t1"; gene_id "g120"; 6_related_000022F_1 AUGUSTUS CDS 17403 18239 0.37 - 0 transcript_id "g120.t1"; gene_id "g120"; 6_related_000022F_1 AUGUSTUS start_codon 18237 18239 . - 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MADMTPENTLDIIEADLGHFAPSPSFTATVMLPPPLSSPLLVTPPLSLSFAQDCSPCAGRTPSISQDYLVDTSIDLIE # AELKSSTTSDNCSVFKSSPLLLLYTPPSLLASFSDFDPSMTSISSASCLGLAVNLPSEHSRFFEEHNPLVDPELSANWNDFGYTPSPANGLSTSSFAP # ATTPIVPGVSSPRKRHPNILTSRILRSFFSSFTPSLKRYIKYSQFPSFFVSRSVVNSFKSSGLRKGRYRNQRRTLMPTSTIIGGRVKVRKIQVLTACI # LAED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 6_related_000022F_1 AUGUSTUS gene 22256 22792 0.84 - . g121 6_related_000022F_1 AUGUSTUS transcript 22256 22792 0.84 - . g121.t1 6_related_000022F_1 AUGUSTUS stop_codon 22256 22258 . - 0 transcript_id "g121.t1"; gene_id "g121"; 6_related_000022F_1 AUGUSTUS CDS 22256 22792 0.84 - 0 transcript_id "g121.t1"; gene_id "g121"; 6_related_000022F_1 AUGUSTUS start_codon 22790 22792 . - 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MDAAPGNTDLPLQTKPIEACVTIHSVSLLPADTQKSLQAAIEELLKPMIPAITKDIQRGFKKVLPKLNIEDFPKVSGI # PVTSIQYKQHTSPEGMYAFDMGVRGKLDILHDEERCNLPDCGCYNVKNALGSSYYGEISQACVEDGKKIYTGFIGGNNIETGVMDKLIEFKNGKVSLI # TC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g121 ### # start gene g122 6_related_000022F_1 AUGUSTUS gene 27691 28356 0.53 - . g122 6_related_000022F_1 AUGUSTUS transcript 27691 28356 0.53 - . g122.t1 6_related_000022F_1 AUGUSTUS stop_codon 27691 27693 . - 0 transcript_id "g122.t1"; gene_id "g122"; 6_related_000022F_1 AUGUSTUS CDS 27691 28171 0.56 - 1 transcript_id "g122.t1"; gene_id "g122"; 6_related_000022F_1 AUGUSTUS CDS 28220 28356 0.53 - 0 transcript_id "g122.t1"; gene_id "g122"; 6_related_000022F_1 AUGUSTUS start_codon 28354 28356 . - 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MRRAAHAVLNVRASAQYQPVQIEEAVIFAHKLLYDTSTPLFTKIARSASTMISVIYGKQLLESSEKSKQSDALTEKHS # SESSGPSSDPLHALLDTVHTFTNALAPGSHLVEFLPILDYLPTAMAKWKRNAKRDFQQTASVYESYYNLTVRIFPSFCAGRRSDMVHHSVKVNSSNPQ # PNLCVSLAENEVAGELTAVEKVWVTGAIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g122 ### # command line: # augustus --species=saccharomyces split/input_2/input_2.fa_chunk_0000011