# This output was generated with AUGUSTUS (version 3.4.0). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /opt/augustus-3.4.0/config/ ... # saccharomyces version. Using default transition matrix. # Looks like split/input_2/input_2.fa_chunk_0000008 is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 80289, name = 4_related_000131F) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 4_related_000131F AUGUSTUS gene 395 2394 0.56 - . g1 4_related_000131F AUGUSTUS transcript 395 2394 0.56 - . g1.t1 4_related_000131F AUGUSTUS stop_codon 395 397 . - 0 transcript_id "g1.t1"; gene_id "g1"; 4_related_000131F AUGUSTUS CDS 395 1567 1 - 0 transcript_id "g1.t1"; gene_id "g1"; 4_related_000131F AUGUSTUS CDS 1625 1665 0.88 - 2 transcript_id "g1.t1"; gene_id "g1"; 4_related_000131F AUGUSTUS CDS 1749 2394 0.56 - 0 transcript_id "g1.t1"; gene_id "g1"; 4_related_000131F AUGUSTUS start_codon 2392 2394 . - 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MLDEKDTAETDHQELQKFLALQQGEAVIAANRKRDRSPSPVAGPSSKKVRSDGSKKRSRRRVPVEGAAQESPRRVRLV # VPPGRSMGASTSTPALPRALPSSMEVSVRDESVQGPSSLVQLAAAAEAQSGVAQRFVSPSPVTSPIKGTGSDSLPSNMPPTSRSLLVPRTLIAHPYRA # ENQRLLARVRSLESQLADSQRENSSLTTALRDTSHALDALPAMDRALSVFPGQTVVQRLQALEEELRVVKRDHDVAVEELSTASHKASELKTALLQQQ # GLVDKTNALATRQRRRLEEVQEEVHRTQDRAAFVEQMIKEYPDEGFYEVVLPPLSQLEEDLKGAQEDLRRVATYAHRLYRSDPATVLHHHSRYIGAII # EAVVAFLRRGLASDDPDVVAHNFQLALDYMQTARGIHGDLYMRSISSIQWFFNNAVDEDEGLHRLVLEHSRFDNDGPILTTAQHAGFAAPPEGSLEPP # LHRRMLALSTAFPHRDGSGRWDDIVPAIPSLDQSMVVWEQLMLEYLHHITDTPMSLPVPSGEPPAAVGERVSSPPASSHVPLFLPEQASPTSPSPPPP # SPSLPPLFGSVADLAIDLTGGDDELYEPEESRRARVSEADGMDAVPKEEPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 4_related_000131F AUGUSTUS gene 4256 4655 0.73 - . g2 4_related_000131F AUGUSTUS transcript 4256 4655 0.73 - . g2.t1 4_related_000131F AUGUSTUS stop_codon 4256 4258 . - 0 transcript_id "g2.t1"; gene_id "g2"; 4_related_000131F AUGUSTUS CDS 4256 4342 0.75 - 0 transcript_id "g2.t1"; gene_id "g2"; 4_related_000131F AUGUSTUS CDS 4399 4512 0.76 - 0 transcript_id "g2.t1"; gene_id "g2"; 4_related_000131F AUGUSTUS CDS 4569 4655 0.77 - 0 transcript_id "g2.t1"; gene_id "g2"; 4_related_000131F AUGUSTUS start_codon 4653 4655 . - 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MHTSTPTDNWEDEQMITQGDEEEDELAIQSRGPVIQDPERPSPDDVEDEPMIPGSSDEEDKDRLAIQHGVSGTQGHTT # PSQGSSSEDKVEDLISH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 4_related_000131F AUGUSTUS gene 20866 21300 0.29 - . g3 4_related_000131F AUGUSTUS transcript 20866 21300 0.29 - . g3.t1 4_related_000131F AUGUSTUS stop_codon 20866 20868 . - 0 transcript_id "g3.t1"; gene_id "g3"; 4_related_000131F AUGUSTUS CDS 20866 21192 0.69 - 0 transcript_id "g3.t1"; gene_id "g3"; 4_related_000131F AUGUSTUS CDS 21280 21300 0.31 - 0 transcript_id "g3.t1"; gene_id "g3"; 4_related_000131F AUGUSTUS start_codon 21298 21300 . - 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MSGHDAPESDTSKVSATLHIKLTLKIDLEKGALPPLGQIYPLSEKELITLKDFINKQLATGAITPSSSHHGAPVLFVP # KKDGKLWLCVNFRGLNCITKKDRYPLSLISDLLDAPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 4_related_000131F AUGUSTUS gene 21491 22453 0.33 + . g4 4_related_000131F AUGUSTUS transcript 21491 22453 0.33 + . g4.t1 4_related_000131F AUGUSTUS start_codon 21491 21493 . + 0 transcript_id "g4.t1"; gene_id "g4"; 4_related_000131F AUGUSTUS CDS 21491 21538 0.55 + 0 transcript_id "g4.t1"; gene_id "g4"; 4_related_000131F AUGUSTUS CDS 21581 21626 0.68 + 0 transcript_id "g4.t1"; gene_id "g4"; 4_related_000131F AUGUSTUS CDS 21810 22453 0.52 + 2 transcript_id "g4.t1"; gene_id "g4"; 4_related_000131F AUGUSTUS stop_codon 22451 22453 . + 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MEWPTAVSIKKYYSSTVDHHIAPQASHRYSCSQRSPCLQCCIPGYNTAQENGDSLSEPELDPRLHSATPLQDVENCSP # SEDSAISESQITSSQAFDESQDTLSQVSTQVSSTLSQTSVTSSQLQKTPAPKCASSDIADTPTPWSSKYVRLTGPEAIHSLGQSVHGISDTLHDIFGT # TSKSTALSPSKNLAIAWQRIKEDVQGFYISDDQATDLKILFARDNAAADAYGAEEDPVDHAKIAAKLLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 4_related_000131F AUGUSTUS gene 37223 38914 0.98 + . g5 4_related_000131F AUGUSTUS transcript 37223 38914 0.98 + . g5.t1 4_related_000131F AUGUSTUS start_codon 37223 37225 . + 0 transcript_id "g5.t1"; gene_id "g5"; 4_related_000131F AUGUSTUS CDS 37223 38914 0.98 + 0 transcript_id "g5.t1"; gene_id "g5"; 4_related_000131F AUGUSTUS stop_codon 38912 38914 . + 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEDQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTARIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPGGPGGPGGPGGPGGPGGPRSPISPDIPNEQRAMLKLLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKSGSTNQQNNSQPSGSSAPFTPKPKPFS # GGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 4_related_000131F AUGUSTUS gene 39247 42810 0.98 + . g6 4_related_000131F AUGUSTUS transcript 39247 42810 0.98 + . g6.t1 4_related_000131F AUGUSTUS start_codon 39247 39249 . + 0 transcript_id "g6.t1"; gene_id "g6"; 4_related_000131F AUGUSTUS CDS 39247 42810 0.98 + 0 transcript_id "g6.t1"; gene_id "g6"; 4_related_000131F AUGUSTUS stop_codon 42808 42810 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHPDSPQTSVPSAINPVAAKVTV # PLPEPSPSVSPTILETPPGDSLRPRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKTAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPALRASIIMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEK # FSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPMKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 4_related_000131F AUGUSTUS gene 45673 46839 0.92 + . g7 4_related_000131F AUGUSTUS transcript 45673 46839 0.92 + . g7.t1 4_related_000131F AUGUSTUS start_codon 45673 45675 . + 0 transcript_id "g7.t1"; gene_id "g7"; 4_related_000131F AUGUSTUS CDS 45673 46839 0.92 + 0 transcript_id "g7.t1"; gene_id "g7"; 4_related_000131F AUGUSTUS stop_codon 46837 46839 . + 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPMHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSASAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 4_related_000131F AUGUSTUS gene 46890 50606 0.84 + . g8 4_related_000131F AUGUSTUS transcript 46890 50606 0.84 + . g8.t1 4_related_000131F AUGUSTUS start_codon 46890 46892 . + 0 transcript_id "g8.t1"; gene_id "g8"; 4_related_000131F AUGUSTUS CDS 46890 50606 0.84 + 0 transcript_id "g8.t1"; gene_id "g8"; 4_related_000131F AUGUSTUS stop_codon 50604 50606 . + 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQNFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPLAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASERE # AQVLEGLKTVKEHGLQRLANGIAKWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARK # KIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRS # LLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRI # LREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWK # GNSINGEIPTPPEPVYLEDEDEPEYQVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKMVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 4_related_000131F AUGUSTUS gene 58607 59032 0.76 - . g9 4_related_000131F AUGUSTUS transcript 58607 59032 0.76 - . g9.t1 4_related_000131F AUGUSTUS stop_codon 58607 58609 . - 0 transcript_id "g9.t1"; gene_id "g9"; 4_related_000131F AUGUSTUS CDS 58607 59032 0.76 - 0 transcript_id "g9.t1"; gene_id "g9"; 4_related_000131F AUGUSTUS start_codon 59030 59032 . - 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MFPITSTLPSLPMTLDDQLPAVPNFDQRMVLWDRYLQVYLEALLNGTPLEPVRRILDDPLREKSHPPAVNTSLPHGGV # EPTNVASDGSYVKNLSTSCGGPVPGSPDENIATASSSSVSIVDGPIEEKTVDLSSDNGSIFTP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 4_related_000131F AUGUSTUS gene 59807 61394 0.56 - . g10 4_related_000131F AUGUSTUS transcript 59807 61394 0.56 - . g10.t1 4_related_000131F AUGUSTUS stop_codon 59807 59809 . - 0 transcript_id "g10.t1"; gene_id "g10"; 4_related_000131F AUGUSTUS CDS 59807 60145 0.58 - 0 transcript_id "g10.t1"; gene_id "g10"; 4_related_000131F AUGUSTUS CDS 60198 61394 0.57 - 0 transcript_id "g10.t1"; gene_id "g10"; 4_related_000131F AUGUSTUS start_codon 61392 61394 . - 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MAPSTQDPSHGNNARPDHSSPSSNSTSTVGSKEKRTTVTKSDEPSSSILSSFHKVFVNGILLADYVKEDPHWNLLLDI # ATPCMECEHKRIECTVPAKYPRCKPCGSSNCSISRLARHRAFARQHGKDLAFSRKFLDEHGATKKDSYTIPLNYWQMYDSLLCKRNHPPEISAEFRIF # EQNEDLTTQETSPDPHINESSAQLLSKPSKEKKKVPKCLTEEATPKDTKKGKGWAEETTAKNTKKGKKRSAEESVPLDTNKAKRRLTEESLSKDDETG # KGRSAEEALPKDNKKGKGRAVNESIRKDHDTAKRRLVETPPIPARLRAQTKSLSPSDLLDLTPRARSISPLHDRPLKRPHLDPNLNSRETAHDPPSKD # VYSSLYQPMVTPIKKLGSTSAETESRPHTFSLTFQQNPLTSSLPPMPRPINHQRLQTENEKLKEQTQHLESLLASSRLEISRLTSALKDTTTSLETRA # QEVVELRRTIDSETQQKAEYSQVIADYHNLDQAIKGPSSLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 4_related_000131F AUGUSTUS gene 66563 67171 0.67 + . g11 4_related_000131F AUGUSTUS transcript 66563 67171 0.67 + . g11.t1 4_related_000131F AUGUSTUS start_codon 66563 66565 . + 0 transcript_id "g11.t1"; gene_id "g11"; 4_related_000131F AUGUSTUS CDS 66563 67171 0.67 + 0 transcript_id "g11.t1"; gene_id "g11"; 4_related_000131F AUGUSTUS stop_codon 67169 67171 . + 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MSLVRTQTRGHVSSALPGSNAEKTTRRLNPVCDVIEITDSSSDDDKCSVIELTDSSDNEDAPTKKDVLKVRPRKQPAP # TAYTKKHFHKVRPRKQWAATSTDEARLNPPKGDQLIGPQAEGKTVSAMLAQVLELVPDVQPRLARDLILRHFTVGQNQVLEAVIQLLFEPTSGRRVEK # RNSTEQGQLEGGGTKGLGSVRSTIPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g11 ### # # ----- prediction on sequence number 2 (length = 389806, name = 4_related_000040F) ----- # # Predicted genes for sequence number 2 on both strands # start gene g12 4_related_000040F AUGUSTUS gene 8848 9879 0.88 + . g12 4_related_000040F AUGUSTUS transcript 8848 9879 0.88 + . g12.t1 4_related_000040F AUGUSTUS start_codon 8848 8850 . + 0 transcript_id "g12.t1"; gene_id "g12"; 4_related_000040F AUGUSTUS CDS 8848 9879 0.88 + 0 transcript_id "g12.t1"; gene_id "g12"; 4_related_000040F AUGUSTUS stop_codon 9877 9879 . + 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MSENRHRLKVDLFMLRFPFPLEVPSRFHQEIGQLIYVTHDSCGTPSLTLSFCLSIYHLSIKISFGNSFTQVPVPSLPV # FSMRPRLKDGKPIGQYQRPKPGHDRPYYLCCCEFCHVGGVARTAEGEVKGCYFCSGAEIEAHRQFIDSQPRESAQSSTYAAPLPRSAAVPFSTILDST # TPFPSPAASDPSSIPVAVSMGSTPVHECDRMKSPRDEETYDLTKLRAIQEQLEREKIHPSWDPTDIEFIGDPSTSPALPESRDHLLLVCKGPSNSFIR # GHLEWLKQSSDFVATLLKTIPSFDMKADSKGRERFWRPLQSNRSPPATESSIQYFGSVQEASFSLLTGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 4_related_000040F AUGUSTUS gene 18130 19901 0.22 - . g13 4_related_000040F AUGUSTUS transcript 18130 19901 0.22 - . g13.t1 4_related_000040F AUGUSTUS stop_codon 18130 18132 . - 0 transcript_id "g13.t1"; gene_id "g13"; 4_related_000040F AUGUSTUS CDS 18130 19712 0.87 - 2 transcript_id "g13.t1"; gene_id "g13"; 4_related_000040F AUGUSTUS CDS 19811 19901 0.24 - 0 transcript_id "g13.t1"; gene_id "g13"; 4_related_000040F AUGUSTUS start_codon 19899 19901 . - 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MENLFDFSEAMEIEIPDRVFTEEEAREFARIFHFKDGKTSHDFCIASANSNISNPVTADSALVTDEPPSQDTLIISAS # LSTQSHSKEPISSFLHNSNDSDFPPPQPPYPSSTTPPFIWNPGKTETRLVNGSMRACCLGRGCAGKAGATINTNCSFKLCKPCCGKYQAEMNITCKEA # SHKPQAKTSTSGTDQLPMYLHTRPLLPQHYQRREQARIDHQERSTILENRQSYADDIRQKVYIKFWDENGTSDILTTECKTYPFFCLADCSVAVREAI # GATEGRMVKTFDPRLRTWILQESTNKQLLQDGEILLIRSRVCQSGEGMKEAEAEEINRKNPHKRRYEQDVESYLIPTMPSTPRRHISHPEPLVSCSPT # PQLIQPLATTFPRDLSNSPDLPSIINTRPTTPTPAPKKVKRTHVEEPSIPLATIDLTGSNSRHGNWPWKSYQRMHDGFVKLAETGGKHSDVFPVTSNK # TRSVARAAWAAGSVELKAKFRTNPASTWKEYVKEVRTAHGGFIPSYTTQKVKVEKVIAPTSPKVKQEVAELQIDGILQHEVIEIESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 4_related_000040F AUGUSTUS gene 23503 24288 0.96 + . g14 4_related_000040F AUGUSTUS transcript 23503 24288 0.96 + . g14.t1 4_related_000040F AUGUSTUS start_codon 23503 23505 . + 0 transcript_id "g14.t1"; gene_id "g14"; 4_related_000040F AUGUSTUS CDS 23503 24288 0.96 + 0 transcript_id "g14.t1"; gene_id "g14"; 4_related_000040F AUGUSTUS stop_codon 24286 24288 . + 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MLSKGLDDEDEEIPLNIQVKISPTQRPKKALPHRAHVQEETSSSLVLPTIKASTSTSIPLNSTYKKAGKRVTPTLSDA # EDETLEFGRSAKRNRASLAPVLPPTAEPKRGPSPSRLELPGMADAVVQPPPIPVPSKPVQPKSKPPSSTSRPQPAAPLPLSPMPLTAGSDSEEEEWDE # VAAGPTTVEDEGGEEIDINELETLINNHLEDDEQEPENFLDMAIPPEESPVLSMGPPISLKQFAGGDSADDDEDEYSSSDDSDED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 4_related_000040F AUGUSTUS gene 24751 25248 0.78 - . g15 4_related_000040F AUGUSTUS transcript 24751 25248 0.78 - . g15.t1 4_related_000040F AUGUSTUS stop_codon 24751 24753 . - 0 transcript_id "g15.t1"; gene_id "g15"; 4_related_000040F AUGUSTUS CDS 24751 25248 0.78 - 0 transcript_id "g15.t1"; gene_id "g15"; 4_related_000040F AUGUSTUS start_codon 25246 25248 . - 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MLGGNPFSISLPYNQCVVPSTVNGPVAIYVTSDDNPLQSNVVNRASANNILAGPTVAFIDAQPETLGQMVRSSGTGTA # SASSSTQTISPDVAASIVSAQGSATAAGAAATDSSSVSATDSSAAAASTSNSVNDSSDPSAPFRDDFTGLAPGNAINVIGWSNIPSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 4_related_000040F AUGUSTUS gene 25760 26203 0.55 - . g16 4_related_000040F AUGUSTUS transcript 25760 26203 0.55 - . g16.t1 4_related_000040F AUGUSTUS stop_codon 25760 25762 . - 0 transcript_id "g16.t1"; gene_id "g16"; 4_related_000040F AUGUSTUS CDS 25760 26203 0.55 - 0 transcript_id "g16.t1"; gene_id "g16"; 4_related_000040F AUGUSTUS start_codon 26201 26203 . - 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MLFSTTFLVMAVPLAVYAAPLRTTKRQVAAIDVTVLRMSSLLLRSIKLEPSTLEFANTLEQLESQFYAAGLSKFQDSD # FAAAGFTASSIAIQQITNIQSDEATHASILEVCTLSDNQHGSCPIKLNFITGRTNSSWSKSEFDLQLQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 4_related_000040F AUGUSTUS gene 30791 31366 0.55 + . g17 4_related_000040F AUGUSTUS transcript 30791 31366 0.55 + . g17.t1 4_related_000040F AUGUSTUS start_codon 30791 30793 . + 0 transcript_id "g17.t1"; gene_id "g17"; 4_related_000040F AUGUSTUS CDS 30791 31366 0.55 + 0 transcript_id "g17.t1"; gene_id "g17"; 4_related_000040F AUGUSTUS stop_codon 31364 31366 . + 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MARMVAAKAALSTRVDALADSDEKSEPNAPSIGIAHRAKLESRLRALEYQDGHSGIRRFGDNGQKQQKFQMSGETQLY # NTQADLVPTQRESPMETAIKVVLDVKEEKKRAKEERKAKKKAAKEKAHDSADAMDVDGEEEETKEKKRKRRESNINGETKEDTMTKVCILVSLLCHMP # CSEIFLAGDGRRKKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g17 ### # start gene g18 4_related_000040F AUGUSTUS gene 32392 33198 0.83 + . g18 4_related_000040F AUGUSTUS transcript 32392 33198 0.83 + . g18.t1 4_related_000040F AUGUSTUS start_codon 32392 32394 . + 0 transcript_id "g18.t1"; gene_id "g18"; 4_related_000040F AUGUSTUS CDS 32392 33198 0.83 + 0 transcript_id "g18.t1"; gene_id "g18"; 4_related_000040F AUGUSTUS stop_codon 33196 33198 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MGLEWVDDNTCVLVFTSKAAARTGLRYLSKSFGEEPDPDGYITAKPIPIAFWPPEERINRSLGKTQGQSVMKGPIKMR # WARTDDVKKRGAKSDSEFYKKHGRMAGKELFNGRELPMKKRRRNDEEPNVLLQKEQLDDELNEFLAKGEAEDATALDPQPPPSKMRSDYIATDGRTLL # GDASPKPDLVSRLFAPLPRRAQKGRNSNHHGGVSLEDRLWSDKFDLSERTVAEQTSRSGRGRGRRNRDGNRDRPKKSQQELDDELDTFLREE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 4_related_000040F AUGUSTUS gene 34233 37623 0.31 + . g19 4_related_000040F AUGUSTUS transcript 34233 37623 0.31 + . g19.t1 4_related_000040F AUGUSTUS start_codon 34233 34235 . + 0 transcript_id "g19.t1"; gene_id "g19"; 4_related_000040F AUGUSTUS CDS 34233 34972 0.31 + 0 transcript_id "g19.t1"; gene_id "g19"; 4_related_000040F AUGUSTUS CDS 35049 37623 0.56 + 1 transcript_id "g19.t1"; gene_id "g19"; 4_related_000040F AUGUSTUS stop_codon 37621 37623 . + 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MQGQPMINGAGFMGNGMNSMNNGMGNLGNGMSNGMGNGLGNIGMGNQPGPPNSNSGMRFPPQQQQQQQHGPPHHQQGA # GGGGLLPAPPSLGGQPRVSMRGPNPGMPGFPVGGGIGGLGGGPGPNTLRRVASQPQLGPGGAGNLGIAGMTGMGGMPNMGSMGSMGGMAGMSMNMGGG # GGGMGMNPQTSMPAQLRAAHQQHQLRQQLTGPGPGGPGGGPDGVMMGNMRTVPRPVMNSLSQPSNGGPGGSMTPEVFFSGNPNGPNPNNNNHARSLSA # GGNNINGNISSISSMPSTPPNTNGMLIDSQSLPPSLGGTPTQNQPPQNHPPNPHPHPHLNPHSNQNSSNPHTPFTLTPAQQFQQMQGQVHGGGPNGGG # DAMSIDNPNFNGIGGPFGGGVGVGGGGGMPPPARPLSQSSHLNHTFPPQQQHLHQQSHQPHQQQNQSPHQHGHPSQNIQNHPNHPNHSNHSNHHSPHP # SHPSHLPGDPITNMYPPNPPAQGRSPSRPQSQAGSPSAPGPSRSASRAGPGGMSGIGGMSNISGMGNMGGLSGMGNIPGGISGMGGLANMANMGNIGN # IGGVGAGMGFPPSQHAGNMTLPPPPQQQPPGMSGLPPPGMIPSGPGRLPVSGSQGHPGVGGGGPGGGGNQGNGGRPQSSSGLVVQNNQTGLGGGGPGQ # AGPGGRPQSSSGLGGLGPAALANIAPRPAPLHQPSHGQHQSIQQGPHPGQPGQQQIQPGQPGSGQPGGQPGQHPHQGPPHSGHPQHSQSAPSSSAPHL # AQHNHNSAHNPAHQHHHPGHGGPGQPGQMGQLGGQLPPPSAQLHPQRIDSPSSPDPNDMILGRGFGDMGRDMGIRDMNIREFNMRDMRDLNMRDMRDM # RDMRDIREVRDMRDMREMNIREMRDLNRGMGDMREMRDIRPDMRPTIGAMSGAVSGGMPSGSVSGGIPIATGPGPGAGLSMGGMGPTMAGPMGVPIGP # SVGPAGPPGGIMPRHGAVYVVPHPNTVYFSAPFFCLTISSEFPNFLPPSFPNHHPHRTPTALGHGQGLIRLLQFSGNLASESKQKHQLSWWNELIKEY # FTPKAIMRFTLWRDNQRNEAKPFGERFSIFAVSLVSSRWFGCALKN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 4_related_000040F AUGUSTUS gene 37800 39858 0.81 + . g20 4_related_000040F AUGUSTUS transcript 37800 39858 0.81 + . g20.t1 4_related_000040F AUGUSTUS start_codon 37800 37802 . + 0 transcript_id "g20.t1"; gene_id "g20"; 4_related_000040F AUGUSTUS CDS 37800 38775 0.81 + 0 transcript_id "g20.t1"; gene_id "g20"; 4_related_000040F AUGUSTUS CDS 38876 39858 0.9 + 2 transcript_id "g20.t1"; gene_id "g20"; 4_related_000040F AUGUSTUS stop_codon 39856 39858 . + 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MTLTLDGARERLYAYGHAIVECVAAVWTYKYNNGYTVALRGPLTVHVVVTAAPSTTTSPGQPGGATPNGIISNTGPGP # GGGGAPGTPGGSGAGNILLKFEDFQFDASYHDKYIALESIMGPRSIESPKGYLPPPSVTTVGTGTPTTANTSTSTTPRLRNAQVRNGAPAAAVGVTGL # SGPSSSAASSTTMSTNSSPAINGITGSTTASSSSPAMMNGDLNESEADLKPPYPSSAHPYPVSSHLYPPSSTSAPSSAHLPSSAHPSASSGQSQWDEP # RVLISQGFIPGEPVNAFGIPQATMRCLELAESVAQMSDLIVFSKEEGLGPLDALSKMAGKIRESMPLPHQPLINSVSGPGLNFNNPNNPSNPNNLNNN # HPSPSSSGTYGFLGPGSGSGLFFFTGPGPNTMSSVNGVGSPSMSMTTLYSSAPPSVTNPSNSANPSSSSLSSNHPTPSASNNNSGSSPQTRGAQNSQN # SSPSGMSALNSPRKPHKSIPQSQQGVGGGTSPANVSSSSAGGGPSTTSLSTSNVIASSSSSSANPNSSLSSSSTATPNVTNTANPNATASTSTTNRSN # PSSTHTTPAMAPASLKRKQASSDSTGGGSSASGVGGGGSNAGGSSAAGTGSGGGVGGVDPGSQPPPAKRTTRKRGRASTSGTGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 4_related_000040F AUGUSTUS gene 44506 45414 1 + . g21 4_related_000040F AUGUSTUS transcript 44506 45414 1 + . g21.t1 4_related_000040F AUGUSTUS start_codon 44506 44508 . + 0 transcript_id "g21.t1"; gene_id "g21"; 4_related_000040F AUGUSTUS CDS 44506 45414 1 + 0 transcript_id "g21.t1"; gene_id "g21"; 4_related_000040F AUGUSTUS stop_codon 45412 45414 . + 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MSDDNAKLDAQANADSEPVAKKNCGHMGGMDNRVIIEKCGEHIIGMDAVPMREMCSLSMGENDVTMADAENLAGVIAV # PCSSSTQAETANIVSRTEVSTVHPPAVKDITMIKIAHGQVLNFNRADVHDPRQISFATNIPRLERVWDDEGTNWDPADCGTNLLSINGTPIALRYWPE # VFSGKKDARWRALKKNWTEWKVSFYFFKLLSLLLILFQFVVERYRSSTPDAFWKEFTSTDGKCFNWKQICYTLRDQRAIHEQKIVDRAKAEYGADFDK # VFMNRGKVLTDKTAIARRYLEKQTTDIN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 4_related_000040F AUGUSTUS gene 46939 48548 0.95 + . g22 4_related_000040F AUGUSTUS transcript 46939 48548 0.95 + . g22.t1 4_related_000040F AUGUSTUS start_codon 46939 46941 . + 0 transcript_id "g22.t1"; gene_id "g22"; 4_related_000040F AUGUSTUS CDS 46939 47194 0.96 + 0 transcript_id "g22.t1"; gene_id "g22"; 4_related_000040F AUGUSTUS CDS 47266 48548 0.99 + 2 transcript_id "g22.t1"; gene_id "g22"; 4_related_000040F AUGUSTUS stop_codon 48546 48548 . + 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRHNHGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRPIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNHDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPGGPR # SPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALSRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLSYLSGSAK # EWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGIYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLP # EPATLADYRQEVLRIDNRYWKCEETRKREAGKPFIARNPKKGSSDFKTGSTNQQNNSQPSGSLAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRP # AFNHLGADGKVLPSKKERRMKNNLCLFCGGKHQIADCNKRKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 4_related_000040F AUGUSTUS gene 50215 51849 0.38 + . g23 4_related_000040F AUGUSTUS transcript 50215 51849 0.38 + . g23.t1 4_related_000040F AUGUSTUS start_codon 50215 50217 . + 0 transcript_id "g23.t1"; gene_id "g23"; 4_related_000040F AUGUSTUS CDS 50215 51849 0.38 + 0 transcript_id "g23.t1"; gene_id "g23"; 4_related_000040F AUGUSTUS stop_codon 51847 51849 . + 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MEPILLRAIHSEVAARAADRSSTTPTVPPLHPSIPEEYAEFADVFTEIAADSLPEHRPYDLKIDLEEGASPPLGRIYP # LSEKELVALKDFIDKQLATGAITPSSSPHGAPVLFVPKKDGKLRLCVDFRGLNCITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDE # WKTTFRTRYGSYKWKVMPFGLTNAPAAFQWFVNDIFSDMLDVCVIVYLDNILIYSDTPEEHREHVKEVLRRLRNHRLYANPDKCEFNMDTVEYLGYIL # SPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFANFYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKTAFTSVPILAHWEPNRPLIVETD # ASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNM # VIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g23 ### # start gene g24 4_related_000040F AUGUSTUS gene 52715 53782 0.98 + . g24 4_related_000040F AUGUSTUS transcript 52715 53782 0.98 + . g24.t1 4_related_000040F AUGUSTUS start_codon 52715 52717 . + 0 transcript_id "g24.t1"; gene_id "g24"; 4_related_000040F AUGUSTUS CDS 52715 53782 0.98 + 0 transcript_id "g24.t1"; gene_id "g24"; 4_related_000040F AUGUSTUS stop_codon 53780 53782 . + 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKA # LSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDEL # HVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLCRIHPVFHVSQLEPVMPNPF # PNRIQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 4_related_000040F AUGUSTUS gene 54858 55316 0.53 - . g25 4_related_000040F AUGUSTUS transcript 54858 55316 0.53 - . g25.t1 4_related_000040F AUGUSTUS stop_codon 54858 54860 . - 0 transcript_id "g25.t1"; gene_id "g25"; 4_related_000040F AUGUSTUS CDS 54858 55316 0.53 - 0 transcript_id "g25.t1"; gene_id "g25"; 4_related_000040F AUGUSTUS start_codon 55314 55316 . - 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MTTSRTQTTTTSSSTAGPSRSRPIPPPPIDLTAHEEDDVEDEEEDEDEIIRRAQARVERVRARKAATVAKKAAEEKAA # KVAAARERAAQEARERAIRARQQEEEVAERRRLLAEAATARSQRGTSPSEMSASPRRPVVEVRRVVKGKGKAKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 4_related_000040F AUGUSTUS gene 57158 57556 0.84 - . g26 4_related_000040F AUGUSTUS transcript 57158 57556 0.84 - . g26.t1 4_related_000040F AUGUSTUS stop_codon 57158 57160 . - 0 transcript_id "g26.t1"; gene_id "g26"; 4_related_000040F AUGUSTUS CDS 57158 57556 0.84 - 0 transcript_id "g26.t1"; gene_id "g26"; 4_related_000040F AUGUSTUS start_codon 57554 57556 . - 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MNAVIKTCLLLEACPPHSKTCIKIGGEPAIYEPDGLPEAPSINSFSMTVNILEDDAYIGVIQSINDYESMKPADILDD # LEESQDNVGLELKDTGKVQLDDDPSIDMSTLLDSIKEVSKGVSGKTGQEYGRYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g26 ### # start gene g27 4_related_000040F AUGUSTUS gene 58487 58906 0.64 - . g27 4_related_000040F AUGUSTUS transcript 58487 58906 0.64 - . g27.t1 4_related_000040F AUGUSTUS stop_codon 58487 58489 . - 0 transcript_id "g27.t1"; gene_id "g27"; 4_related_000040F AUGUSTUS CDS 58487 58906 0.64 - 0 transcript_id "g27.t1"; gene_id "g27"; 4_related_000040F AUGUSTUS start_codon 58904 58906 . - 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MHGPRLSGTKREWRKIVTFHEICEVVEFSRDEDESGEVFESDEDDNYGNAAEEDVDFFGEGKNEETPHDSYEDIELSD # QEPEEQLELDADTSITGLVDEIFAGSHQTSTPGDTTLMNPLLILKPRTAYLLVKPTTQTGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g27 ### # start gene g28 4_related_000040F AUGUSTUS gene 67360 71646 0.53 + . g28 4_related_000040F AUGUSTUS transcript 67360 71646 0.53 + . g28.t1 4_related_000040F AUGUSTUS start_codon 67360 67362 . + 0 transcript_id "g28.t1"; gene_id "g28"; 4_related_000040F AUGUSTUS CDS 67360 68755 0.53 + 0 transcript_id "g28.t1"; gene_id "g28"; 4_related_000040F AUGUSTUS CDS 68825 71646 0.97 + 2 transcript_id "g28.t1"; gene_id "g28"; 4_related_000040F AUGUSTUS stop_codon 71644 71646 . + 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MFFNNNAGPIASSSSSSGPSTGPAPSTSYSPSSIGHLPPDPTSSVDPSSPPQYSIYSESSDEHSTLAAVVAPGPGSDS # SSSPGGTTTANVVSPPEYHNPSFLSSPPPASSPAPPPPPSSSLPVTQMVGPPSSQPVPPENHPQPFPSTPHTSNTTNTVNVNSLPAPRPDSTGMNLVS # HLSQAQVVNNASPSLIHIHTTGQNPHAHVPGMHLVDRPSQAPVGVSSPSLPPHPPIPQPTSAPVTTTTAPPPPNVPVPTSNAPTPAPATAGHEGLTLA # QRLYASAFSSRPSTTGGPSGGRISTSSPNIHLPIDSHSHMPPTVSLAAVSAEAYNNTNISNNRPNAAIANSFYKTGVLQNLQSQNQPIQQHRPQGGRL # SYHAGSMNYTTAAVASNVSLLSTVHSQSSSAASTVAGGRPQLPSRPQSQQLLLNNVVRPQSQKIEHYNSSGSAGRPVSKPTTVPSVTLVARPPRLSNP # HPTTASMNSHSAVANGPASQSATTSNTAMQGQIGVSGIQSPPTSITSVPGAPSVPARPPLAVGTSGNLSNNNNNSNTLNAPPPTANLPTSSTLPQHFV # VQNPNVHAQNQSGNGNFNAPQTGSMADLPSPPPQVNSHVSVNNPLPPVPPSGAGVASMHSSPVSLGHGPQSSISSQTHSPPPPSHSTTSTLPAHAPQF # TTSPPMYSTSPVANVQSSAQSQSVPTFITSPGTVSPTGYSPGSVPQPSSPPSLPQRPPQRPPQRPPQHPSYTLPMVPTTHNPRPPRPNSTSFSFGSTS # ATLSNTGNMLANFGKAAGRVAGRAALRYAGRLAIGSVLGTNPTLLSGLSGGGLFDNSSLDMLNSSLANLDVTSIGVDMSQFQAAFQGVPGTDYQGIID # SIGQQQQTSPTPGVNYHAIIGALTKIQHAAVQAQNQNHPQAHPAAHVHSNANVGAANNYQAIVNAQAQQIHQMQAMMNSLSMQQQHGQQMQNLNMHSG # QTMNHNPAHQPPRPPQQTQSQSLMQTHLPTPLHTQTPFLSHGQAHPNQAAQSVHTSPHSAPSFPTAHGNSAAATPYHPQSVHTVPSSNYGPASSPPPP # LPSVYSTNVPPPSQQQSYTGGPNTTSPQALPAHLPPIQNTSSPANPSLTTMLGTVGHGLMNAMHQSPQSSHVQNSSSPGHPNQHQHAHTQQQQQFHAQ # QSASSAHHVNINGGNSGSESSTGGSGGPSMLSTVGHEALNLWHHHQQHEHQQQAPQQDSQAYGGDNDSNGQTYDTSLLNGGNPYSDGSSYNDGIQTQL # NYDAPPDFYTMNNSFGPNPSQDQNVDMSDNGFDLNNGFVNGDEFPGAMFPTDLNANQFDFTDGTAGTYEYTSCTSDDQNQSQTFGFGTDGQGGMVGFD # STSFGDPGTGDIYQNTDTTFSNGGFMDSVDTTNVFDNSGDLLFSSTNETVFMT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 4_related_000040F AUGUSTUS gene 71881 73019 0.39 + . g29 4_related_000040F AUGUSTUS transcript 71881 73019 0.39 + . g29.t1 4_related_000040F AUGUSTUS start_codon 71881 71883 . + 0 transcript_id "g29.t1"; gene_id "g29"; 4_related_000040F AUGUSTUS CDS 71881 72174 0.39 + 0 transcript_id "g29.t1"; gene_id "g29"; 4_related_000040F AUGUSTUS CDS 72282 73019 0.99 + 0 transcript_id "g29.t1"; gene_id "g29"; 4_related_000040F AUGUSTUS stop_codon 73017 73019 . + 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MAPRTRRAARNQTPATSTTTNTTNSPLFSTNASVAEDSPATTDVEQVPVTKRTNTRSQSQRGKKRPPPVHSENEDEDE # EADSRPAPKRRATGKSLYVEKAVKLTTKGKGKQRAPPIDDENSETEGGLDYDDAKSLVDSDSSGSEFVASEVEEDDIDEEEELVRPKARSSPVKKRVP # STAISLDGNNSDEDGDTVMLAAAIQLSRQTYRNTNGAGPSSGTQVNAKAALMAAAAERRLADHARTGVDVDDSVMDFDSAINDFDNLSALSGSDSDSE # PLAKKKSKGKKHTKSKSKSKKYKLGIEEPELMTWLQARREQKREQRELSKKLGRKLTNVNHLAFISSLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g29 ### # start gene g30 4_related_000040F AUGUSTUS gene 78239 79207 0.74 - . g30 4_related_000040F AUGUSTUS transcript 78239 79207 0.74 - . g30.t1 4_related_000040F AUGUSTUS stop_codon 78239 78241 . - 0 transcript_id "g30.t1"; gene_id "g30"; 4_related_000040F AUGUSTUS CDS 78239 79207 0.74 - 0 transcript_id "g30.t1"; gene_id "g30"; 4_related_000040F AUGUSTUS start_codon 79205 79207 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MLAASSVPVLFEHLLLKLPRDVNELLLQQHCKGNLDTVCLVLSPCVVSFIHLVQPLHLAVSRGDYRTSSIIIDYTRAG # LAIRNVYGSIPLHIAISKSQAKTVKKLIDSSPDECLFMENGVGNTPLEMTTLLDLLGRLQNVSRDREPELAAQHVNLDPSRITLDKLQQDVPNLRQTI # NTLLKNGPLEIDDKLTKELFAFSRFMETKLTAATAEAEATKEGNEDEPDVKDKWKDPEDRGTTLKIIKEAILARPYQRQLIHLVDVQKSVGSHLSSAE # LRSNTDANNHMHQREHDEEGLEPEEDTEIKLRNSSIVYRRLGQPLLRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 4_related_000040F AUGUSTUS gene 79342 81082 0.76 - . g31 4_related_000040F AUGUSTUS transcript 79342 81082 0.76 - . g31.t1 4_related_000040F AUGUSTUS stop_codon 79342 79344 . - 0 transcript_id "g31.t1"; gene_id "g31"; 4_related_000040F AUGUSTUS CDS 79342 80279 0.85 - 2 transcript_id "g31.t1"; gene_id "g31"; 4_related_000040F AUGUSTUS CDS 80428 81082 0.86 - 0 transcript_id "g31.t1"; gene_id "g31"; 4_related_000040F AUGUSTUS start_codon 81080 81082 . - 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MKLETKKLDSITTAPTTPWRTFVSRTIYLSDNGVLPGSELQKKKFVEDQVELEKTIRKCVALKGFFGDAERLLVSKGA # KTYNILFADTEKRSTATSNVSIQIDHHDHILWQQNSSSTKYFFLGQHDYSREAVPMYLNDRYDELFEACWKGDDIAVRKLCLPDEGKENALKVSVAVA # HPTNQWLQTSLYTSISTFFARMVNPNIADLTPLVAAIEGRHWNEDDEDNLSDDDSAASDVTASAQKRNQPFIDIAQISPAVKVPFPPSRLLNSHYVTY # EEGGGSLVLIKAIKTKDFEAFVHIADLYKLTEPPLELGQGYILDAILAADEPEMLDEYIRRTGSGLDLQSHGDETEEKEIRAINDKNKIYLGLSVHGK # KRKDLAQKNDPANFHYQLQDQDVTPILWRAILSSSKEVKIIEYLASTRPLEAYRFYAMTHGSELSIRLRRITDLEQILPDRLGWCTNNLGESPLVAAI # LSNKLNVIKLLFAKKPKLMSAALKERYVSYQSITMPEVLMGFQDEIQWLQPFNACSPSWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 4_related_000040F AUGUSTUS gene 81361 82443 0.59 - . g32 4_related_000040F AUGUSTUS transcript 81361 82443 0.59 - . g32.t1 4_related_000040F AUGUSTUS stop_codon 81361 81363 . - 0 transcript_id "g32.t1"; gene_id "g32"; 4_related_000040F AUGUSTUS CDS 81361 82443 0.59 - 0 transcript_id "g32.t1"; gene_id "g32"; 4_related_000040F AUGUSTUS start_codon 82441 82443 . - 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MIAEGVDVNRRDHVGRMPLHVAVLAKAEDVACDLIDAGARITSRLAEGKTALHIAAQLDQLKVVKKLLERSKMNEDLL # KKDGDAEEGNGDVEMKEAVRDSSEDDWSSADDGVISMEEVEDTDVDDEDDGDDVDDDNGDDNDGSPRKKTKSKEVSEPPKTPTEYNALPEDDSGEPDV # FDINAPDWDLCFTPLSYAILFASLPVIDTLLLSGADANLATTASYPDAPRLHPLLLTVYHSDEEQACSIAERLLQAGAASSAADQGRTILYKMIEAGK # TKLVNSLLRLDPKAGVVLNLPSMNMNNGRPTLPLIAAVQLNNLEMVTTLLAYGANVVFKAEDVVRAQELRNQYEILFCTYPSSHAN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 4_related_000040F AUGUSTUS gene 101427 105196 0.37 + . g33 4_related_000040F AUGUSTUS transcript 101427 105196 0.37 + . g33.t1 4_related_000040F AUGUSTUS start_codon 101427 101429 . + 0 transcript_id "g33.t1"; gene_id "g33"; 4_related_000040F AUGUSTUS CDS 101427 102194 0.37 + 0 transcript_id "g33.t1"; gene_id "g33"; 4_related_000040F AUGUSTUS CDS 102272 105196 0.51 + 0 transcript_id "g33.t1"; gene_id "g33"; 4_related_000040F AUGUSTUS stop_codon 105194 105196 . + 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MSSISASASSTPVDSHPLSPDEILSSSRSRRNRVSNLSTQNALPTNYFTLKAQLEQHQYDNDTWDGSVRRLAKTDRRN # SLDSEHFRANRPSLASTFYSDDSAPETITAPLIIVGSDDQHLPVNDIVEATSASLQELAIDPVITSRVLTTKWHEYSDEAIQSAISGISISKSPAEVS # SHPYHSALRVLSTALHNLSKARLELEQSRRTLLEKEDARRAKAEGLAREMKGEKEREIARRVVKEIFGDNDVEEGEQRSRSLADSLSEAIEDQVPLSR # SVPPDPILTPIPSSPILDGYSPGDDAGSIASRVPQTSNVSKYELTDPLTIIPARTASAASVASDRSTNTIGDWMGSLWGKRGPRSRVVSTSEASLSNK # PTAEESAIETPVPRSGAHSRLQKRKTAKSVFGTLGISILNPGLASSSAKDSLPEVDRSSVDYVDGENTATPSNPQTSVIASSSVVVESRDEISPLVDD # DVSVRSGRSVRSARTTHTTHTATTTYTINTMNSSAAGFSAVSSPVLPAPPQLSMNTSLETSTTTSSTTLGTNTNMKMSSSEESPALPASGQPVQGSSL # RAIANATRVMSADPSSILSDPGETGPLIKSLAMDLIRNAREEGVVFKESRSARTKGQKLKTNNINPIIESITSPIISDASATSFAPFSSDGDAASNVV # SHTSDAAKKLSRALGLGPALEANSKLTRSGGFKNTVSSIVPLPSPSLFGGFSWQSTTRPRKGRPASASSNTPGGTGSAGAVDDTTSAGNNKSSAQDSG # ISAVLPVSGGGKNRIPNAPSVPLESIIPAIAKPPTQYLSRTYTPLTSRNFRFDINIINNAHTSIVSPVPGAPPSSARRLSFPLSPSTPTGSSSSSGLV # LLTDRYGFMYDVCQYDVLLLLRARHCQCTAPACLTGVKIADREEDNTWPDSEEEDEGQDGQAKKSIQIVKEGCECNGDGNGPDLDKEPKTIVSNEGDV # VDDGKSTKSTATTQSSLADSKKGSMKNKSRQKGLSHATNTSPSGSPPILVASSLTNSAASILAVNADTPRHACPNTVRRLLNDLTSIHDQRQEAQRKD # WDAFVRQRSTAKARSQQSQAMKSATGNSASGSNGGGAVSSAAALLGLGVKSYDAGEEDELDHSEGLIGFAQLGLPANKEERKEFARLVRKGIPLVYRS # KLWLECSGGLEMREPGLFRDLLADVAKDLAQGTGGGVIAEIEKDVGRTMPLNMFFGGDGPGVDKLRRVLTAYSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 4_related_000040F AUGUSTUS gene 108019 109059 0.94 - . g34 4_related_000040F AUGUSTUS transcript 108019 109059 0.94 - . g34.t1 4_related_000040F AUGUSTUS stop_codon 108019 108021 . - 0 transcript_id "g34.t1"; gene_id "g34"; 4_related_000040F AUGUSTUS CDS 108019 109059 0.94 - 0 transcript_id "g34.t1"; gene_id "g34"; 4_related_000040F AUGUSTUS start_codon 109057 109059 . - 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MPSSAEPGNFSPSPRRINEHEEGSRRRRALVLRGHDGVGAIAVQMLVKRGWRVCVHASFLRDPELVEEGSREERVYME # SVERRVRRWGAEEVVFDDGGGSDPEGGGGGCEDGVAAVVRVIERLVEDGDVFDAVLDTVGGKEIWEASERLLRNTGVPSPSPDSIFPSISSSSEIKSS # LLGRRKKKDKNNDASPLPGNQSHPWGTGQFTTLVGDTPSRPIPTASDHFRAGLRSMKNTHNATTTKDGSNGSPVKKGANGNGKVGYAWVSVAQDVDWE # GEDIRDSLGAVVKMAMNEGVRPWVGGSESGGNGEVNDNNGDERVVPFERTPRIFVANGPLSNGGTAVVKVVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 4_related_000040F AUGUSTUS gene 109615 111258 0.99 - . g35 4_related_000040F AUGUSTUS transcript 109615 111258 0.99 - . g35.t1 4_related_000040F AUGUSTUS stop_codon 109615 109617 . - 0 transcript_id "g35.t1"; gene_id "g35"; 4_related_000040F AUGUSTUS CDS 109615 111258 0.99 - 0 transcript_id "g35.t1"; gene_id "g35"; 4_related_000040F AUGUSTUS start_codon 111256 111258 . - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MGRKNRLSTTAEIVSVESHVIDSKLCLDGQLDDKDSGSEEDIFYTPDTSPMAPLVNQLHLPPNVDNDSAIATRTPFTP # RSTTTSISSNSLDGHSIFSLDSSPLSDSTFITTPNVSDTGHDIDYVTKSARRSNPDRTKQPSLTYTDEDWAKDVRWLAPPSAKLSTKRKSKPSANNNT # VASTSYYIAQLPPKIVPQPPLPRPRPRPKIRSKSVGITAHYSIMSSMTALLEEEDEDRESAHHPSQGSLRSAAAVAASPSERLRTHSTSSSARPRPSN # SLRRQNNLSTKPLSRRKSRSLEHLPPITSARRLLPDSVHSLSSFASSTSYVPSIPSSGTPGYTSLTLPRAPQPAFTPNPSKRVSVVGGADGKIDLTRS # GIAQTTMATVEVTKGLAGNMKSGVFGLGNLLNRARSRSVSAAKGSVTVSPLDELGTTASSRFRSGKAGVDAVLNFTSYRRPPDYIPGGGVLVQVWAVA # VDGIDAKLAGVVHSRVEEGRNPRFNIPSQRTSEKEGTKNTSSSTRPSLFRSVSARKHKRSESDNNSLGRNSSVGYTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g35 ### # start gene g36 4_related_000040F AUGUSTUS gene 114118 115656 0.39 + . g36 4_related_000040F AUGUSTUS transcript 114118 115656 0.39 + . g36.t1 4_related_000040F AUGUSTUS start_codon 114118 114120 . + 0 transcript_id "g36.t1"; gene_id "g36"; 4_related_000040F AUGUSTUS CDS 114118 115656 0.39 + 0 transcript_id "g36.t1"; gene_id "g36"; 4_related_000040F AUGUSTUS stop_codon 115654 115656 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MGEMDISPPPMPDFLASPQAASSTSASTFEIERGASPSTSSESHHSIPDNLWDSAPAVNGGSDVELATSQEDNSVTSS # DHTPSTSNYPELFGEYDSSLPAVDLSLPRPLLHSSITAHSGCGFVLDPLLIDHHAAPPVHSGVQGPYPGPESSPHIDIPSALTFVNTNVGVSPAFVGL # GVNQAGNESPTGQTSSFGNESFFENPITPSRAPVERSHFAHQEVAPLAIRHSPLTGATPFNPDGTQTGYTPVVQSTHYQSMSGPCLNPNGPEMGLSTV # AQLNPQPPPASHHPYIFGFPKAEPTLNYESISPHPHWNQIAFQFGVTPPPPATIIRSRSRELVVQAGLKWDHDKGPLILPDLGYLPQPDIFPPVIKTV # MDTYFNHIIRPPPTADHYILWWNAVWISKQFVLKVQQQQQATSVGTAISSERRSFRGNPPSGTTRRKTPTSQNHPDPQSTSPVHNSSIQLPTASQPSA # EDLAKMKPFSIFITETGRPRGRAATISDERSKKLKKARPAPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 4_related_000040F AUGUSTUS gene 117565 118605 1 + . g37 4_related_000040F AUGUSTUS transcript 117565 118605 1 + . g37.t1 4_related_000040F AUGUSTUS start_codon 117565 117567 . + 0 transcript_id "g37.t1"; gene_id "g37"; 4_related_000040F AUGUSTUS CDS 117565 118605 1 + 0 transcript_id "g37.t1"; gene_id "g37"; 4_related_000040F AUGUSTUS stop_codon 118603 118605 . + 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MISRNTSSPPRTRERYTGEADAQSSKISQLLPGTDEELNAHDGEEVEEHQVEEEEEEEDGGDTGSELEGDLNGGMGQG # MDPQGFAGPKIVKPLTTEALAAYKAAQDRAGVIYISRIPPGMRPSKVRHLMSSHGEVGRVYLQQEGAINCFKKSSSDTYISVTADAKRAYLRRKYTST # KKPHFTEGWVEFIDKKVARSVAEMLNAQPIGGKKGTRWRDDVWTMKYLPKFKWSMLTEQVGTYLKIIRLYDPRKNAYAYSSLAHEAAIHTAKLRVELS # QSRSEQRDYMRNVELARVLEKRSQRKKEQGEEMVLKPLSRTNKRSSEVEGDVARKRHRDNEDGLDTVLGSIF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 4_related_000040F AUGUSTUS gene 120015 121440 0.18 - . g38 4_related_000040F AUGUSTUS transcript 120015 121440 0.18 - . g38.t1 4_related_000040F AUGUSTUS stop_codon 120015 120017 . - 0 transcript_id "g38.t1"; gene_id "g38"; 4_related_000040F AUGUSTUS CDS 120015 120407 0.91 - 0 transcript_id "g38.t1"; gene_id "g38"; 4_related_000040F AUGUSTUS CDS 121432 121440 0.33 - 0 transcript_id "g38.t1"; gene_id "g38"; 4_related_000040F AUGUSTUS start_codon 121438 121440 . - 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MIKPAASVDFSGISFSAGDSVTVTATVISTSEGTLTIENNSKGTTVSKTVSSSAKLCETNAEWIVEDFEECEGSSCSL # VPFANFGTIEFTGASATTSSGTVTPAGSTLIEIEQSNKVLTTVSQSGSTVTVVYA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # start gene g39 4_related_000040F AUGUSTUS gene 124126 124659 0.76 + . g39 4_related_000040F AUGUSTUS transcript 124126 124659 0.76 + . g39.t1 4_related_000040F AUGUSTUS start_codon 124126 124128 . + 0 transcript_id "g39.t1"; gene_id "g39"; 4_related_000040F AUGUSTUS CDS 124126 124659 0.76 + 0 transcript_id "g39.t1"; gene_id "g39"; 4_related_000040F AUGUSTUS stop_codon 124657 124659 . + 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MFEHHKKSPWFWEKYDPAPEFQKLRQRVRKEGWKGRLNTFLLDLETGKYDPDMNESVDANESTGSKDANGEELHIDGL # GEALKPSGDDDIPFHMDAEDEVGADTNGKSASDNRRWNNAEEIAVPPEGNQVMIRTIPPDIGRVKLEDVSFLLAAHSILQLMCSLVVQIHSWLCLSCS # W] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 4_related_000040F AUGUSTUS gene 124847 125266 0.87 + . g40 4_related_000040F AUGUSTUS transcript 124847 125266 0.87 + . g40.t1 4_related_000040F AUGUSTUS start_codon 124847 124849 . + 0 transcript_id "g40.t1"; gene_id "g40"; 4_related_000040F AUGUSTUS CDS 124847 125266 0.87 + 0 transcript_id "g40.t1"; gene_id "g40"; 4_related_000040F AUGUSTUS stop_codon 125264 125266 . + 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MKPFVNKIRVTPDVASRPERMEKDLANTKILAGLLEEEAAVLRKFKPSKDNTQPKPEGADDVPMEENNPETADVDVEE # EEEPQERGSDAVERRIEKVMAELRDQGLVDVGNEEAYETKRVPLIVFLTFSPTHEIISSSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 4_related_000040F AUGUSTUS gene 126882 129756 0.7 + . g41 4_related_000040F AUGUSTUS transcript 126882 129756 0.7 + . g41.t1 4_related_000040F AUGUSTUS start_codon 126882 126884 . + 0 transcript_id "g41.t1"; gene_id "g41"; 4_related_000040F AUGUSTUS CDS 126882 127724 0.7 + 0 transcript_id "g41.t1"; gene_id "g41"; 4_related_000040F AUGUSTUS CDS 127828 129756 1 + 0 transcript_id "g41.t1"; gene_id "g41"; 4_related_000040F AUGUSTUS stop_codon 129754 129756 . + 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MLPSNSGKLTEAGPSLAGEADGEHLVQDAVVLDMAPFNKFSIISPSEPSRPISTPTSSDRPALSSSDSGGDSSDDDDS # GQERENGDTFDANHSPSIPRLRPILPGPPIQNHPRFSRAFSLPLPSQLGHLKHPHRSSLSSLMKPIHSEPVSPQSHPFTELSLELADSVQTVIQTMLQ # ISPAQLLDPAKEQFSACALSVPTPSMSAMFTAMKNLNYIAANMVEFAAEKQHSESTPPSSSSKKHDDFDIGELLQCTGDALSASAAQVGVDLVLFHGD # VALRHVWVLTTCQRGDTIEIGLFVNRSPSTRRQNSSSSDSVDADVLRSTALHLEGEGPFHCTIEIFHRFSPASTSEGLSRHEPSFTSLNLRRLLVTVG # ATLSEYKPSFDGPLKIGHSCRLSFVLDGGISPQQTPATVTEDNSISTSEPTLEQLSTFVDSLKGKKVHLYASSKGSFAHHLTSYLTAWGMDVSHIPSE # GGVENALEQPPSPTATSNIEGYMPSGIPPKMELPQQPKSQPASFIFIDDDVNILKDRVQAIKEEQVYPLHLNSRKRPSLAAHHRPRSSPQVVRMSAGA # NAAPVVILHFTSLANYKVTKDVVQSVLNSYRGTLLPLPEIMVVPKPAGPRRFLTLLHTAVTKPVVDPFFSPIATTPNSPYTIGGGSFFSPQHHHSGSP # RTPSVHRPSGSRSNSDRSSRSVNNILENHVNLPPSPLSMQESSEYFSETVSRLGETSVKLGDTARAGVILQSPDGQPTGIFFSPRAEKTNMFSSYGME # RDRGHLSVVSGTRRSSSSVEGPPVTFSSLHLDHAASAESSPRSSGIRVNVQIPSRQNSRSTMSPHTDTSEAPHSEPQTPRKTSIDFGSRKGMLHVSPP # GSPLVDSTAIRNTRRSKLDSKGLSPIVTGKKGKSPAEGNIVPPISVLIVDGMKFTLFRASN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 4_related_000040F AUGUSTUS gene 129957 131123 0.12 + . g42 4_related_000040F AUGUSTUS transcript 129957 131123 0.12 + . g42.t1 4_related_000040F AUGUSTUS start_codon 129957 129959 . + 0 transcript_id "g42.t1"; gene_id "g42"; 4_related_000040F AUGUSTUS CDS 129957 130648 0.23 + 0 transcript_id "g42.t1"; gene_id "g42"; 4_related_000040F AUGUSTUS CDS 130744 130859 0.99 + 1 transcript_id "g42.t1"; gene_id "g42"; 4_related_000040F AUGUSTUS CDS 130909 131123 0.58 + 2 transcript_id "g42.t1"; gene_id "g42"; 4_related_000040F AUGUSTUS stop_codon 131121 131123 . + 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MPVMDGIDATRAIRNIERVNSGYIQPSPSVELEELFSALSDDTDSRTSAASPYRSSVIIVALTASSLQSDRIAALAAG # CNDFLTKPVSLQWLNNKLIEWGSIKALSMYADMTTEAVKTQTDQAKNIADRLHVPKGRKTPPSPPAPKSPAVLPTTHVPSPTSAPAQSPSPRSGTSSA # MWSPPQASAVISFRAHLGLKSPEQHDSQNLPDESTPTTVCPPSAATGISSSLQPPNRPRFDPNASTSTLKQGDIFRLKSGEVASSDNVRESGSTSSVS # RSPSPTTPATPGSPLLPATMGDDEKSKVADTQDAANLRLELNVPGGCIELYTQSGNVREDSVVVPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 4_related_000040F AUGUSTUS gene 137202 138365 0.17 + . g43 4_related_000040F AUGUSTUS transcript 137202 138365 0.17 + . g43.t1 4_related_000040F AUGUSTUS start_codon 137202 137204 . + 0 transcript_id "g43.t1"; gene_id "g43"; 4_related_000040F AUGUSTUS CDS 137202 138365 0.17 + 0 transcript_id "g43.t1"; gene_id "g43"; 4_related_000040F AUGUSTUS stop_codon 138363 138365 . + 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MEAVLREEEQEKGEESQCLDERGENREPNYTSSSPSDSTGVSTPSEIGVPIPALNVEKERSYTNGHQYQAQPSYYHQP # YRPYQQLAQQPYVSQLQTAHADLPLVSSIGYNQRDQIQYSLQEQYRTRLSELPHTQGLPYESEYGRHSYSNSKSLPDHSSSTLQPTSSPYVLPQINLQ # SSGTSSQSLYQPLSHRSDIPLHAIPTYNFDALTETIFRKNWRKGTPILVTDVSQRFRIRWTPEYFIKEYGDQGCLIIECQTDVNRRVTVGQFFSKFGK # YAGRENGPMFEEISLGSQDSLLPAPDNEDRLGTKKSEIWKLKDWPPSADFKMTFPELYEDFSQAVPIPNYVRRDGTLNIASHFPHNALAPDLGEYLGF # SIDFCLLILFRSQNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g43 ### # start gene g44 4_related_000040F AUGUSTUS gene 142708 143430 0.98 + . g44 4_related_000040F AUGUSTUS transcript 142708 143430 0.98 + . g44.t1 4_related_000040F AUGUSTUS start_codon 142708 142710 . + 0 transcript_id "g44.t1"; gene_id "g44"; 4_related_000040F AUGUSTUS CDS 142708 143430 0.98 + 0 transcript_id "g44.t1"; gene_id "g44"; 4_related_000040F AUGUSTUS stop_codon 143428 143430 . + 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MIHVDRNQHTAVLSSHSKQNLVLPVEKQLRDWAESVPQKPARILSPSQPETTLPGPTTPKDNQPIAANPEAPSPSASP # ADGNSASPNREHSSSSLSPIPDTAHSSPPPPTTNSSNNEAALAEPLLDDKESRQSTPLSELSPPPDDDDPPPDENKDPENFADDAITKKEYSDVEVKF # LEKSSLSTNPYPSRSSDYAPSPSTSPNHTLSHPNGKDPKVATILELNSELFKYVPVLVDHKTDN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 4_related_000040F AUGUSTUS gene 143704 145895 0.23 + . g45 4_related_000040F AUGUSTUS transcript 143704 145895 0.23 + . g45.t1 4_related_000040F AUGUSTUS start_codon 143704 143706 . + 0 transcript_id "g45.t1"; gene_id "g45"; 4_related_000040F AUGUSTUS CDS 143704 144462 0.23 + 0 transcript_id "g45.t1"; gene_id "g45"; 4_related_000040F AUGUSTUS CDS 144612 145895 1 + 0 transcript_id "g45.t1"; gene_id "g45"; 4_related_000040F AUGUSTUS stop_codon 145893 145895 . + 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MEAPPLIDIIAMDRIQQLYADLPSVFTKIMPRRPSLGAGIPNNNHMGMNFNHLKRERTDEGSLDMTAHKRRDTGEGKV # NNNGMMMPPPSLPLQDQLSNGISSSPSLSTGNGSLPISIAPQTSVSAMSGMIPPTLGQGMSGTGSLPDAGMSEAQLNQAVREQRMANMRAQQQRPGGL # PGMPSTPQPQQGGRHMSPPSASIAASSNLQISPTSSNHSGPSTVVPGGGGGGGGGLSSVQQMQQQAYMLLQIQPPHPVLQSRQQQQQQQQLHQQLQQQ # QQQQQQQSPPQSLQPQMNGIPNGVFPIHTSPISPVAQQAQMNPMILAGGQGGMNPGPSAGNSAGMSGGGNNINNMGMNSMTPNQRQQLMLMQQQRGGG # SMGSGGMNPMNNMNNMNGMSSQQYAMLQQQRQQQQAQQGMSQGAISPTQSHHGGGNGSPMIPGSDLNNFPALRSNAAIPGIARSARSPPDGGIGGGGG # GIGIGGISGSGPGNQSPMTPRMPARGPSMGQDEFARMMGGSVGPSPRGGMMSGSGPGNFTPQQMQNWQQQQMAGGMRPPSAHGGGYGGGGGGSMGAPS # PGSAGGGFGSGSSGGMGSPSYPFPTPSPGSGHPGNLSSSNLGLGMPRHMSATPGPGQQMRNPNMNMNGMNNMSNMNNMNNMGMGMGMNMNSPMSADPF # SFMSNDIDSFSWTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 4_related_000040F AUGUSTUS gene 149737 150732 0.87 - . g46 4_related_000040F AUGUSTUS transcript 149737 150732 0.87 - . g46.t1 4_related_000040F AUGUSTUS stop_codon 149737 149739 . - 0 transcript_id "g46.t1"; gene_id "g46"; 4_related_000040F AUGUSTUS CDS 149737 150183 1 - 0 transcript_id "g46.t1"; gene_id "g46"; 4_related_000040F AUGUSTUS CDS 150277 150302 0.9 - 2 transcript_id "g46.t1"; gene_id "g46"; 4_related_000040F AUGUSTUS CDS 150429 150732 0.91 - 0 transcript_id "g46.t1"; gene_id "g46"; 4_related_000040F AUGUSTUS start_codon 150730 150732 . - 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MSRRGRKKKNPSHPPQHEQEVDNTPPLDVPSSRQPTTKFTSLLATKLVAATRTERPFAAKYGEVQSTWQRVADLVSNE # ARLNPPMSKKTAQDKVNQMVKMHHGLCHEMDENLAAQEAAGKKAREAAMKTLEQTELGRKRRWNEAFLAALSDSDEPEDNESSYDTEAIETTQSHKRH # LATKATGNPAYNAASGPIKDVFGELASVVNRAEADAMESTVRLAEENNSIQRERLEVEKQMLTAIQGLSSTLFHSHHFIRQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 4_related_000040F AUGUSTUS gene 155700 156449 0.48 - . g47 4_related_000040F AUGUSTUS transcript 155700 156449 0.48 - . g47.t1 4_related_000040F AUGUSTUS stop_codon 155700 155702 . - 0 transcript_id "g47.t1"; gene_id "g47"; 4_related_000040F AUGUSTUS CDS 155700 156449 0.48 - 0 transcript_id "g47.t1"; gene_id "g47"; 4_related_000040F AUGUSTUS start_codon 156447 156449 . - 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MNDLSDDFGIYGSEYTGVPLFSDSSLSMYQLLESPELAEEVLFKAYELPKLVPELTSASATTSDIVTPISLDGSTTGN # PAVPTTSDPAPKTGKGRRSNATGTRKNVTPESLVPVDAPIQARKYATPSATSRKEIPAAFLKSQKRKRSRIQAFGDDEIPNPSVGGALSPEDDAAEEQ # PPLNATEKELIEWKRRQNTLAARKSRKRKLEHQQFLETRVKDLETENEMLKVKSEALEAALRAHNIFLPPIEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 4_related_000040F AUGUSTUS gene 158578 159554 0.67 - . g48 4_related_000040F AUGUSTUS transcript 158578 159554 0.67 - . g48.t1 4_related_000040F AUGUSTUS stop_codon 158578 158580 . - 0 transcript_id "g48.t1"; gene_id "g48"; 4_related_000040F AUGUSTUS CDS 158578 158904 0.67 - 0 transcript_id "g48.t1"; gene_id "g48"; 4_related_000040F AUGUSTUS CDS 159009 159554 0.75 - 0 transcript_id "g48.t1"; gene_id "g48"; 4_related_000040F AUGUSTUS start_codon 159552 159554 . - 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MSYYIGVDVGTGSARAVLVDDHGKTIASHTKETTTWRDHDDHRIFEQSTNNIWDSISSCIKKCLAESKIQPSSVKGLS # FDATCSLAVSDFNGDPVVVTKGKDLGQKGDRNVILWADHRAEKEAELINSTGSVVLDYVGGTMSVSAPNKRWSMYPDTDLNHSLRWKFLKHFGSKTIW # NLPYLRSGWQADFFEKIGLEELVQTNYMQLGAANGEVLTAGKPVGNGLSKQAAEEFGLVEGTPVGSAVIDAYVCSQTRQYLLHPCLCAVDMLDGWELS # PDDIRKTASSLMLSLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 4_related_000040F AUGUSTUS gene 159665 160567 0.31 - . g49 4_related_000040F AUGUSTUS transcript 159665 160567 0.31 - . g49.t1 4_related_000040F AUGUSTUS stop_codon 159665 159667 . - 0 transcript_id "g49.t1"; gene_id "g49"; 4_related_000040F AUGUSTUS CDS 159665 160567 0.31 - 0 transcript_id "g49.t1"; gene_id "g49"; 4_related_000040F AUGUSTUS start_codon 160565 160567 . - 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MDFLENWAQLSRGDSNDLVLPQSWSRDLNLPTPAGVPSMMPGILILPPSSTPPPLPVLRVDGLRWFISNASLAQLKTD # CIAVLNSEDPVRSWISSADAFTALVWGAMTRARHKIPTKSMLFTNNDAELESLGVAVDGRERLGLGAGSPTRFFGNLNLSLAVYAPRADLLGATLKAT # SDVALIIRRTIQDESRPETIASRVAFLESKVEATKPYTHRIVLEGDCRSTNWSKYDLTKLDFGLGSNVKSVGTTLGTKSTYPAGMFLIVKSSGGLVVA # TTVEKEADVLLKMDPLLTQYAEVLVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 4_related_000040F AUGUSTUS gene 160662 161159 0.89 - . g50 4_related_000040F AUGUSTUS transcript 160662 161159 0.89 - . g50.t1 4_related_000040F AUGUSTUS stop_codon 160662 160664 . - 0 transcript_id "g50.t1"; gene_id "g50"; 4_related_000040F AUGUSTUS CDS 160662 161159 0.89 - 0 transcript_id "g50.t1"; gene_id "g50"; 4_related_000040F AUGUSTUS start_codon 161157 161159 . - 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MSGDQFKALYKPAIDTELIKPSKKRHLPPILEPIRLYPLDLLMPPINVRMPILFKIIPALDLESSSAIYEEFEIIVAK # LKASLAEALELYPPVAGTIHKSPGDASAITIACDGRGATFATQVERQSYMESEHTLDGLSAGDLLALDDSQTPFGVKLTLVSTFLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g50 ### # start gene g51 4_related_000040F AUGUSTUS gene 163204 164167 0.23 + . g51 4_related_000040F AUGUSTUS transcript 163204 164167 0.23 + . g51.t1 4_related_000040F AUGUSTUS start_codon 163204 163206 . + 0 transcript_id "g51.t1"; gene_id "g51"; 4_related_000040F AUGUSTUS CDS 163204 163654 0.42 + 0 transcript_id "g51.t1"; gene_id "g51"; 4_related_000040F AUGUSTUS CDS 164028 164167 0.42 + 2 transcript_id "g51.t1"; gene_id "g51"; 4_related_000040F AUGUSTUS stop_codon 164165 164167 . + 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MSFEFTQLIALYTSLITHSNALKSLQREHRKHLQREKELSNILDALRTGYNPNYQDMAVLEAVRGWEEIAGLPHINDV # GKDSVSDEEAGVEEDTVSDVAQSKEEVDDEMWSAEELENDLDDLLNSDYISLLLEHDEYVQSPPEGSVREFFRQRMESKSVIEVLCVPFNPPFVATHM # RFASSVKPNRFPTREDLLSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 4_related_000040F AUGUSTUS gene 166033 167650 0.34 + . g52 4_related_000040F AUGUSTUS transcript 166033 167650 0.34 + . g52.t1 4_related_000040F AUGUSTUS start_codon 166033 166035 . + 0 transcript_id "g52.t1"; gene_id "g52"; 4_related_000040F AUGUSTUS CDS 166033 166683 0.75 + 0 transcript_id "g52.t1"; gene_id "g52"; 4_related_000040F AUGUSTUS CDS 166742 167650 0.42 + 0 transcript_id "g52.t1"; gene_id "g52"; 4_related_000040F AUGUSTUS stop_codon 167648 167650 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MFSAPKSVTTNRLSSSTQPFVHRQPATSHSEIASATSPEHLQPPPTADPREIETPAAQTSFDIHSYPPHDLLRLLASL # LTQIASTNDKLDAASSSSTLSSSSSTSSELHNVVWRSLTTASRSALSTPSSTLTFHARNIPTISLESYLLRILKYCPTTNEVFLSLLVYFDRMTKLTS # EATGRSFVIDSYNIHRLVIAGVTVASKFFSDVFYTNSRYAKVGGLPLAELNQLELQFLLLNNFNLVIPKDEMQRYAEQLILFSSNKSPSLGVSSSSSS # ITPRPTATSATAPPQSNDMVPMHCMGAIDAYGGPIPGGESPASSSLPPSTNLPFSQSGTSMTRQGARPGVESNALSRIINPSQHQPHHALNGLVNGNG # FSSSLRMQHQEDSEFEGAETETETETEAETETDGGWTTDDEPTIRPPKSSAGSSSSSSRSSSASDALSICSSVSENDSVEGDDEREDHVMSDIDDDEE # GGRTPEHSAQAETSKDGEKTPERKPFQSLLGMSKITPPGRREHEATDSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g52 ### # start gene g53 4_related_000040F AUGUSTUS gene 168425 170476 1 - . g53 4_related_000040F AUGUSTUS transcript 168425 170476 1 - . g53.t1 4_related_000040F AUGUSTUS stop_codon 168425 168427 . - 0 transcript_id "g53.t1"; gene_id "g53"; 4_related_000040F AUGUSTUS CDS 168425 170476 1 - 0 transcript_id "g53.t1"; gene_id "g53"; 4_related_000040F AUGUSTUS start_codon 170474 170476 . - 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MTAPNIALNLDHSKQPSASRSLLLAIQKVLIIFIDSKSMEFPRVNHNINLVTLPQSPMGIISSTSAHSPNDATVIETQ # ITDDELPGISITNLLVSQRARSPLTPKHLPIKATGFTSTSINRGDIRTYLTPRDKPNVGTSYDSASPILSPTSPSRITVANTKNRKLLPLPNKPVIDL # TLDDQDNIIDSSIKSNTFGGHPGKQPRIQLPTYGETTDSQSSSWKLHNGSTSSKGSSAKQPRRLPRMVHGAPRDVQKRLGRRPRKFPIHATAAALINQ # SKERFSKKPVTVSTSETDNNQEILSTEPEGFAIPSRSIQRSPKLFDVEKQGPRIPDTSASPHNVMRNSQYKSEEEHDLVGALTSAFTRNAIPDDFDNS # SDFSSGTHSDVAPPKRSRSLRQAIKRVPQIPTSPALNLLRQERTPRGLCVPLSEEAIQKYLDVEYSSVHLPLGVSVAPENDSEYVDPNDELLLDYDSS # NEIVAMRREQQQLRLYHAPTVLVHNLRFVMEQAESSAGGISRSNPFRQYNVSTMPLTMAYVHRVESHCGYGALDSIRSSMPDWDFHPKPLKVSSSSSR # KKRKLIHSFKQYRIRVAADGSYSNNAVPAESLDVGELVARPEKHPQPVNDSESRKRVKFFNNVANLVPSTTLSEGAGRPEFDVIACGELLLKLVKGKV # QIAAQVSCHFRLLRIWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 4_related_000040F AUGUSTUS gene 173239 173850 0.67 + . g54 4_related_000040F AUGUSTUS transcript 173239 173850 0.67 + . g54.t1 4_related_000040F AUGUSTUS start_codon 173239 173241 . + 0 transcript_id "g54.t1"; gene_id "g54"; 4_related_000040F AUGUSTUS CDS 173239 173494 0.9 + 0 transcript_id "g54.t1"; gene_id "g54"; 4_related_000040F AUGUSTUS CDS 173561 173850 0.73 + 2 transcript_id "g54.t1"; gene_id "g54"; 4_related_000040F AUGUSTUS stop_codon 173848 173850 . + 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MPPKTQAQSRANSEENTFFTTAQSFAPFSEFISAIGQLRRRNHGFGPATVCTTSTLPEAMEEDQQFEYSTLYTSDGQP # VQVLTPCSIARRTGKQPQHCATSQSPRDPPPHFDLDAGDHDDQDPPVDLNNPGANNNNPDNDDLDDKSGGLPRGEPGGPGGPHSPISPDIPNEQCCHA # LTYLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g54 ### # start gene g55 4_related_000040F AUGUSTUS gene 176267 177898 1 + . g55 4_related_000040F AUGUSTUS transcript 176267 177898 1 + . g55.t1 4_related_000040F AUGUSTUS start_codon 176267 176269 . + 0 transcript_id "g55.t1"; gene_id "g55"; 4_related_000040F AUGUSTUS CDS 176267 177898 1 + 0 transcript_id "g55.t1"; gene_id "g55"; 4_related_000040F AUGUSTUS stop_codon 177896 177898 . + 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MPPKTQAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRCRNRGFGPVTVPTMSILPEAMEEEQQFEYSTLYTGDGQP # VQVLTPCHGQPPVVAPARGWSTTRIESPILQAIAHRTGKQPQRRAASESPRDLPPHFDLDTGDHDDQNPPVDPDNPGADNDNDNLDDNSGGLLRGEPG # DPSGPGGPRSPTSPDIPKEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQQKVNYT # LSYLSGSAKEWFVPDILDLDLDSLPAWMSSFKALVKELQDNFGIYDAQGKAEDSLGNLKMKETENIQFNTLAASTNWDSAALKWAYGRGLAERIKDEM # AHLPKPATLADYCQEVLCIDNHYWKREETRKCEAGKPFIARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTLKPKPFSGGKPNNNGKPQNSSNSGQSG # GQHPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKAQESKGRAAKVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 4_related_000040F AUGUSTUS gene 180264 181622 0.73 + . g56 4_related_000040F AUGUSTUS transcript 180264 181622 0.73 + . g56.t1 4_related_000040F AUGUSTUS start_codon 180264 180266 . + 0 transcript_id "g56.t1"; gene_id "g56"; 4_related_000040F AUGUSTUS CDS 180264 181622 0.73 + 0 transcript_id "g56.t1"; gene_id "g56"; 4_related_000040F AUGUSTUS stop_codon 181620 181622 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MLSTLRSRPTPPTAPTVAPLPHSIPAEYAEFADALPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLA # TGAITPSSLPHGALVLFVPKKDGKLRLCVDFRSLNRITKKDRYPLPLISDLLDALKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTCYGSYEWKVML # FGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEKHRKHVKEVLRRLRKHRLYANPDKCEFNMDTVEYLGYILSPDGLTMSKEKVQTILEW # PVPRKIKDIQSFLGFANFYRRFIYNYSDIVVPMTRLTWKGAPWIWDNDCQEAFENLKIAFTSAPILAHWKPNRPIIMETDTSDYTIAAILSIQTVDGE # IHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDIVTNHKNLEYFSTTKILTCRQVCWSEYSTNSTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 4_related_000040F AUGUSTUS gene 181820 182941 0.71 + . g57 4_related_000040F AUGUSTUS transcript 181820 182941 0.71 + . g57.t1 4_related_000040F AUGUSTUS start_codon 181820 181822 . + 0 transcript_id "g57.t1"; gene_id "g57"; 4_related_000040F AUGUSTUS CDS 181820 182941 0.71 + 0 transcript_id "g57.t1"; gene_id "g57"; 4_related_000040F AUGUSTUS stop_codon 182939 182941 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MDIEALHQAIILALPKDPSSVVGLELAKDPSNERWSLGSSDGLLRLNDHIYLNHGNLRLQVLRYFHDHPLSGHFGQNR # TLEAVRCQYTWLKVRDFVRDYVSSCTTCGCNKPRHHWPYGLLKPLPVLVRPWDSISMDFIEQLPMLNGYTATLVIVDRSSKQAIFIPTFNTITSEQLA # ELFVIHVFSRHGVPNHVTSNRGSEFISAFFQALGKALSMELHYTSGYHPEANRQTERVNQTLEQYIRIYCSYQQDDWSHLLPIAKFAYNNALNASTGI # TPFFANKGYHPNITVRPEVDMKSDLARDFVINLDELHVFLREEILLAQSCYKEQADRKRISHPEFRIGSEVFVLAKHIRSTCPTEKFSEKYLCPFKVI # S] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 4_related_000040F AUGUSTUS gene 183030 183290 0.49 + . g58 4_related_000040F AUGUSTUS transcript 183030 183290 0.49 + . g58.t1 4_related_000040F AUGUSTUS start_codon 183030 183032 . + 0 transcript_id "g58.t1"; gene_id "g58"; 4_related_000040F AUGUSTUS CDS 183030 183290 0.49 + 0 transcript_id "g58.t1"; gene_id "g58"; 4_related_000040F AUGUSTUS stop_codon 183288 183290 . + 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MPNPFPNLTQSPPPPIEVDGEEEYNVAKILDSKLDRRYKCCPLRYYIQWAGYEGTNNEFSWAAADELHADELVPTFHT # RYPQKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g58 ### # start gene g59 4_related_000040F AUGUSTUS gene 184363 184707 0.92 - . g59 4_related_000040F AUGUSTUS transcript 184363 184707 0.92 - . g59.t1 4_related_000040F AUGUSTUS stop_codon 184363 184365 . - 0 transcript_id "g59.t1"; gene_id "g59"; 4_related_000040F AUGUSTUS CDS 184363 184707 0.92 - 0 transcript_id "g59.t1"; gene_id "g59"; 4_related_000040F AUGUSTUS start_codon 184705 184707 . - 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MSISRTTTTTAGPSRSCPALPPPKDSAIHEEEGLEDEDEDDIIRRAQEQVERVRVRKAAEAARKAAEEKAARGASARE # KVAQEAWERACRAQQQEEEAVGRGSDSSESEGNLPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 4_related_000040F AUGUSTUS gene 186295 187374 0.48 + . g60 4_related_000040F AUGUSTUS transcript 186295 187374 0.48 + . g60.t1 4_related_000040F AUGUSTUS start_codon 186295 186297 . + 0 transcript_id "g60.t1"; gene_id "g60"; 4_related_000040F AUGUSTUS CDS 186295 186675 0.48 + 0 transcript_id "g60.t1"; gene_id "g60"; 4_related_000040F AUGUSTUS CDS 186775 187374 0.98 + 0 transcript_id "g60.t1"; gene_id "g60"; 4_related_000040F AUGUSTUS stop_codon 187372 187374 . + 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MSTSQTVTATTRPKTSTAGPSRSRPTPPPPIDLTTHADPDEDDDDVLEEDDDEAIRRAEEHVRKMKARKAAAAAKRKA # EEEAARKAAEEAAARELEERRRRMAEAATARSRRGSSPGGSSISPRRPVPVGGDPDDGGDGDDDDEDDDDRAPCERCRSKKISCQMQAGKRSSVICKP # CHDAKVRCSYSGRPSTVKREGGNPYGERLAVLESQVAQLLADNRQLRDGQVKANTYHRHMNRKLDWLVTEASRRRKTPPELPEAGPSVLPKKRRRLAD # SDEEEEQMRVEQEVGEEEDGEGEEEMEEREEEERDEPAPKKARSEKGKEREE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 4_related_000040F AUGUSTUS gene 187750 191313 0.99 - . g61 4_related_000040F AUGUSTUS transcript 187750 191313 0.99 - . g61.t1 4_related_000040F AUGUSTUS stop_codon 187750 187752 . - 0 transcript_id "g61.t1"; gene_id "g61"; 4_related_000040F AUGUSTUS CDS 187750 191313 0.99 - 0 transcript_id "g61.t1"; gene_id "g61"; 4_related_000040F AUGUSTUS start_codon 191311 191313 . - 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINPVVAKVAV # PLPEPSPSVSPTILETPPGDSPRSRSCSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMELILLCAIHSEVAA # RAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIIYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPDKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKTAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPANPSSVVGLELAKDPSNKRWSLGSDKLLRLDDRIYVPNHGDLCLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEK # FSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 4_related_000040F AUGUSTUS gene 191646 193337 0.99 - . g62 4_related_000040F AUGUSTUS transcript 191646 193337 0.99 - . g62.t1 4_related_000040F AUGUSTUS stop_codon 191646 191648 . - 0 transcript_id "g62.t1"; gene_id "g62"; 4_related_000040F AUGUSTUS CDS 191646 193337 0.99 - 0 transcript_id "g62.t1"; gene_id "g62"; 4_related_000040F AUGUSTUS start_codon 193335 193337 . - 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRHRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQSQRRAASESPRDLPPHFDLDTGDHDDQNPPVDPDDPGADNNNDDLDDDSGGLPHGEPG # DPSGPGGPGGPGGPGGPGGPSGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSSNQHNNSQPSGSSAPFTPKPKPFS # GGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # start gene g63 4_related_000040F AUGUSTUS gene 196067 196981 0.45 - . g63 4_related_000040F AUGUSTUS transcript 196067 196981 0.45 - . g63.t1 4_related_000040F AUGUSTUS stop_codon 196067 196069 . - 0 transcript_id "g63.t1"; gene_id "g63"; 4_related_000040F AUGUSTUS CDS 196067 196429 0.74 - 0 transcript_id "g63.t1"; gene_id "g63"; 4_related_000040F AUGUSTUS CDS 196482 196601 0.89 - 0 transcript_id "g63.t1"; gene_id "g63"; 4_related_000040F AUGUSTUS CDS 196661 196981 0.68 - 0 transcript_id "g63.t1"; gene_id "g63"; 4_related_000040F AUGUSTUS start_codon 196979 196981 . - 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MSVAQSMREAAQAAEEFAKAIGTPSLINGHTKGKGKTGDEEVINGKRKRVKKDPNAPKRPASSFFLFQNQIRQKVKEQ # HPDLPTAELRKLMSEQWSTLPEDQKNVGLHYKQLAEELKVVYSEEKEKYNARSPEQVAAADAVVAAAAATKKAPKSRKPTATDAPVVAKKPVIPPVSG # SDESDNESSEDDKVKLKTGKPTKNAPAPPRKGQKSEPFVPDSDEDDEEEDEDESDQVKQSSDEEEEEEEEEQPPTKKSKTKHHDKPVSRRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 4_related_000040F AUGUSTUS gene 197448 198741 0.49 + . g64 4_related_000040F AUGUSTUS transcript 197448 198741 0.49 + . g64.t1 4_related_000040F AUGUSTUS start_codon 197448 197450 . + 0 transcript_id "g64.t1"; gene_id "g64"; 4_related_000040F AUGUSTUS CDS 197448 197623 0.49 + 0 transcript_id "g64.t1"; gene_id "g64"; 4_related_000040F AUGUSTUS CDS 197967 198741 0.64 + 1 transcript_id "g64.t1"; gene_id "g64"; 4_related_000040F AUGUSTUS stop_codon 198739 198741 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MEQSNFYTTWLTSQPGQSTNSSTFDDWPKERPTTTTHASATPSTTLGEINDIFTELGGLPALTSVGGPSQSASQPPRA # YSQPLSLTSSPHTSLSAQPPQQNQAQQPFSFSSLSTIYHPSHNLPPALLNQYHSLQQQQSPPQLHLQQPQQVQQSQGTLSPQSLHSPSAFTVVAPNSF # YAQPSHQQNGLTSIPNAASSTTVSSLQPAHPLPTTAEQRAQLYAVIKPMLQAASFTGAGAVQTLAQRIDDFGTTEIDAQLRMEVLTKIRDGAGNHYFR # AWGENATALEITREWLKQAYAAKQDNPLSETTMPLLHVRSVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g64 ### # start gene g65 4_related_000040F AUGUSTUS gene 199120 200075 0.65 + . g65 4_related_000040F AUGUSTUS transcript 199120 200075 0.65 + . g65.t1 4_related_000040F AUGUSTUS start_codon 199120 199122 . + 0 transcript_id "g65.t1"; gene_id "g65"; 4_related_000040F AUGUSTUS CDS 199120 199174 0.66 + 0 transcript_id "g65.t1"; gene_id "g65"; 4_related_000040F AUGUSTUS CDS 199270 200075 0.88 + 2 transcript_id "g65.t1"; gene_id "g65"; 4_related_000040F AUGUSTUS stop_codon 200073 200075 . + 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MRSDQGYGIEHRTTMAPAHIKPKKRKLEAPIKAPPLSKKPAVGSATSTKPIAVKKEASSLLTKTPPTKDAKSDSSFFS # APKAKPKLPSFKKAPLPLPGNSGTGKKGVNNNVAQPSSIDPFQEVLKSMSKGRKGSPVIGAPSSATPPPGSSNTPPSVAGTPNIAGNSGLTKLGRKKK # SVTWAPDHSLEAIKFIEPAVYDDEPVDVSTCFPLFLETVLTRHLLFALSLSNDCLSFSMFVFVLQGMHLNLRDLDRGEGAALHAHLFEETVDWYEPLR # KQFKSRHSNVRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 4_related_000040F AUGUSTUS gene 200210 200833 0.88 + . g66 4_related_000040F AUGUSTUS transcript 200210 200833 0.88 + . g66.t1 4_related_000040F AUGUSTUS start_codon 200210 200212 . + 0 transcript_id "g66.t1"; gene_id "g66"; 4_related_000040F AUGUSTUS CDS 200210 200833 0.88 + 0 transcript_id "g66.t1"; gene_id "g66"; 4_related_000040F AUGUSTUS stop_codon 200831 200833 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MTEAQIPDTPSEATNTLPEDEIDKDVITMISGPEADSVFWSSEASAAPPALFGGAVADILSQLSTGNFSLMNGANSSG # GAGEINGGMPMGHSHDMMNLSNVDPLSVQSLPPEQLQVLLQQLNPAFGNDQSWQNPASANHYSQYGYSDDNSNEPSPRWVEGRGRGRGRGRGRGGRGE # DGFRNSKRKPCSFFQSGRRAKLKVVLMIRSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 4_related_000040F AUGUSTUS gene 204489 207563 0.67 + . g67 4_related_000040F AUGUSTUS transcript 204489 207563 0.67 + . g67.t1 4_related_000040F AUGUSTUS start_codon 204489 204491 . + 0 transcript_id "g67.t1"; gene_id "g67"; 4_related_000040F AUGUSTUS CDS 204489 204540 0.67 + 0 transcript_id "g67.t1"; gene_id "g67"; 4_related_000040F AUGUSTUS CDS 204739 207563 1 + 2 transcript_id "g67.t1"; gene_id "g67"; 4_related_000040F AUGUSTUS stop_codon 207561 207563 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MSELPSDDTLTTIISDLDSGIVINIPSSSNAKITIETNGGGCGCGDDGDEEYYDDEDYDDGEDEGEDDEITQDSGYGS # SDDLAAALGSALATDSGDSSNALTGSAIWSRKALKNAVRSSGASSSSSASSDGASASSNATASDSSAGASATGSADGASSTSASTTGADSSSSTDTSS # ASSASSSAVSGSAADSGSSSTTGAATDSGSATSTAGNATDSGSASTSTSGSSSTDSGSSSTTGSATDSGSAATTSGSASTSGSASTSGTSTVETCNTA # WQKCNTDWQGAGSNTGSYTCQKDYQSCIQGSSAGSSSSSGTTSTSSGSSSSGSADTSSTSSTSGSADSGSAASSSGVGSTDSSSSTATAAASASATAD # ADSSTSQDGDSNTGSSATDASSPTSSSTGTSSADTGSSTGTSSADTGSSSGTSSADAGSSTGTSTADSSSASSSTAADSSSASSTAAADSGSTGTESS # AAASATASSDSSSATARGIDGSNSTSSATDCGCSDSSNSTATASGTDSASSSAASGADSSSTDSGSAASATSTADASSSSSTTSSSGTDSSSGANSTA # TASTDSPSTPTATGAAASDSGSSASASGSTDTSSSSAGATTNSTGTDSSSGANPSAAASTDSASTSTATGAAASDSSSAAGATTSATGSTGTDSSSGA # SSSAAASTDSASTSTATGAAASDSGSSASASGSADASSSTTSATGSTGSSGTDSSSGAANTTDSSSASTATGAAGSGTDSSSSSNSTGTATGTSASGS # ADASSTGSPSADSSSGATSATSSASTSTATGASADSGSGSATSSGTGSSCSGSSSSSADAASSTGSAASSTSAGSSSTGTDSSSSSTGSGCPCADGSA # ANSTSSADSSSGSTDSSSATTGANAGASASAGASADSGSPSGTTTSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSGTSKRSVKGRRSSVMKEMSFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g67 ### # start gene g68 4_related_000040F AUGUSTUS gene 208081 208911 0.57 - . g68 4_related_000040F AUGUSTUS transcript 208081 208911 0.57 - . g68.t1 4_related_000040F AUGUSTUS stop_codon 208081 208083 . - 0 transcript_id "g68.t1"; gene_id "g68"; 4_related_000040F AUGUSTUS CDS 208081 208911 0.57 - 0 transcript_id "g68.t1"; gene_id "g68"; 4_related_000040F AUGUSTUS start_codon 208909 208911 . - 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MGVDGNQSDFDATYISSHFTAVKQFHLWPQAALHTQWPGNGTAGDPIFDNFYASTMPSLISDEESSVKVRKALGDLLD # LIGVCSLLYARFKDTQLIYVFHLQPVVLLTHSQSGQYGWILGDTRPSLIKTIIALEPIGPPFINAVFPPLTPARPFGLTEIPVTYSPPIFFASDLKTE # IVPSLSNASLGTTCYHQAAPARQMVNLKEIPTLVVTSESSYHAIYDACTVGFLAQAGVPVTHVELASVGIKGNAHMMFMEKNGLEIAEQVVLDWIQKT # TL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 4_related_000040F AUGUSTUS gene 211117 214277 0.68 + . g69 4_related_000040F AUGUSTUS transcript 211117 214277 0.68 + . g69.t1 4_related_000040F AUGUSTUS start_codon 211117 211119 . + 0 transcript_id "g69.t1"; gene_id "g69"; 4_related_000040F AUGUSTUS CDS 211117 211291 0.68 + 0 transcript_id "g69.t1"; gene_id "g69"; 4_related_000040F AUGUSTUS CDS 211351 214277 1 + 2 transcript_id "g69.t1"; gene_id "g69"; 4_related_000040F AUGUSTUS stop_codon 214275 214277 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MGLPELPASSSEDNVIEKDYVRRRALWALEGKQNDASFSKVEIPELSSSEVEKKMFDFSSKSFSTPSNSGYGKRESFK # PSSSKDQLHTLVEEEEEEEDWDFQKSSPRKLPVSAVSLSNDDKLPTTPVTPDDAFAKQTASRPRPATLTLRPLSLTAGGLPTPSLTPSVRPGLRSLSL # VPNDEQTTRNSFNDVSPTPYLRARPANLQISTSRGSVDETSCAIPIRRSSISYKSSAAAAGLPTPEMTPTFSERRYSHNSLGSNTSVSGISNDEDFLQ # SNASYSRHRPLSASEQHFLFKSHNALLSRIQDLEKALIVRRTSVSSVPGSRPLSSSFSVTDSEDMSISSEPSDEMLRLVADLKAERDELKRDVDGWRV # RVGDLEKQIGLLGKRVEGERREAWVARSRTNLLEAEKNTFEKEYGQAKEEMARMEEEKNKEIAQLTAQVRTLEADKQRTIQDNAHLSGECEYWKVEAA # RLSKMRKDEMLISTVRSTYDTEHAPSAWRRGLHYDSVDSLESSTDVDFGSFDSDHGFGFSLKAVAEENEGDLDVHGSQIPEEDVEADYLSDEEDNGLA # GYEDEEEEDFTFQSSGSSSSFGSIHEISKPRSATRLQMDVLMPSSPAIRASTLSSGSGSNTPSTLTPGSRSLSSSPVPSVASNMDALKSTRVQATVVP # VHRSVGSLSKTWTFPRAQSASTSHDPRNDVDKFFDCLEDSETDSTGSRSPVSPSIYTYEHNKGLFAKGLEAFDDNEAMPFALPSNIISMVVEEQDSPR # SLPVVIEEEEVEDDDEQTRVDDDDDMLGDNAGIKITLTPAAEDDNDEYLSSHIEDSDEEETDADEENDEIAQQDRTVNVHDTETHPRFKSTRKPVPVF # EEFDEGNDDDDVPFNFGQPLRSSTPPHTLAMTTPPRSSVRISSPSPSSIPRPTSSFNTSTSSPNILESSPTITLSKLPVRPTSSFVTPPTKRGGAMSS # FIPLPITSSSPSPMRKQPSVREKPLVASFIRQPVRRPLMAANSSTSSTSRAGHNDSNGSAIQSSFDFINSSCT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 4_related_000040F AUGUSTUS gene 216735 217330 0.23 + . g70 4_related_000040F AUGUSTUS transcript 216735 217330 0.23 + . g70.t1 4_related_000040F AUGUSTUS start_codon 216735 216737 . + 0 transcript_id "g70.t1"; gene_id "g70"; 4_related_000040F AUGUSTUS CDS 216735 216742 0.35 + 0 transcript_id "g70.t1"; gene_id "g70"; 4_related_000040F AUGUSTUS CDS 216904 217330 0.46 + 1 transcript_id "g70.t1"; gene_id "g70"; 4_related_000040F AUGUSTUS stop_codon 217328 217330 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MPSLHRWNRDKMLSFVPPDGRFTLMDYTFSSNPLPSPSPTQQSLTSVMSSRSNLTIPFIIKAIVELEDSGGSFDVTLT # SRYSTHALENIVADIHLGPGAGGIRCNVSRGSGGGGFINAGGSRNLDTSGASSGASWSFDAQRTVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g70 ### # start gene g71 4_related_000040F AUGUSTUS gene 219629 219901 0.98 - . g71 4_related_000040F AUGUSTUS transcript 219629 219901 0.98 - . g71.t1 4_related_000040F AUGUSTUS stop_codon 219629 219631 . - 0 transcript_id "g71.t1"; gene_id "g71"; 4_related_000040F AUGUSTUS CDS 219629 219901 0.98 - 0 transcript_id "g71.t1"; gene_id "g71"; 4_related_000040F AUGUSTUS start_codon 219899 219901 . - 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MSAITITYTVHPPIESVSPDELPTSRTIEVPINASQDGGNSYYSVLHEALEKAINEIGADLTIWRDAVGKLEMSKEAK # KNDVGEEEEDEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g71 ### # start gene g72 4_related_000040F AUGUSTUS gene 220560 220952 0.63 - . g72 4_related_000040F AUGUSTUS transcript 220560 220952 0.63 - . g72.t1 4_related_000040F AUGUSTUS stop_codon 220560 220562 . - 0 transcript_id "g72.t1"; gene_id "g72"; 4_related_000040F AUGUSTUS CDS 220560 220952 0.63 - 0 transcript_id "g72.t1"; gene_id "g72"; 4_related_000040F AUGUSTUS start_codon 220950 220952 . - 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MTKCGRFGANSFDYSPAAIRNSVLQSLHRLQTEYLDTVYLHDVEFVCTPVQAKQTGNHALALTEEKAAYGLEEGQEGI # IYGEGDQKILDAFAELRKMKEEGLIRSIGITGMFSSSFRISIFMTFVFKVTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g72 ### # start gene g73 4_related_000040F AUGUSTUS gene 224507 225184 0.53 - . g73 4_related_000040F AUGUSTUS transcript 224507 225184 0.53 - . g73.t1 4_related_000040F AUGUSTUS stop_codon 224507 224509 . - 0 transcript_id "g73.t1"; gene_id "g73"; 4_related_000040F AUGUSTUS CDS 224507 225184 0.53 - 0 transcript_id "g73.t1"; gene_id "g73"; 4_related_000040F AUGUSTUS start_codon 225182 225184 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MASGLKKEDDFKNKAAFPLQDSMTKWVSRLALGLVLVSMCLLLDAIKVSVKSLFCSTLAGIVSQHRWYVLDPSSLHEL # AQAAIASSPDDTAGMIEHIVSNLTATYPSSTIALNTKSSEWVFNNAGGAMGAMYIIHASITEYLIIFGTPLGTEGHTGLHTADDYFNILVGEQWAFSP # GQLEMERYPAGSVHHLPRGTAKQYKMHKGCFALEYARGQPLHSWLHRSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 4_related_000040F AUGUSTUS gene 226721 230641 0.72 + . g74 4_related_000040F AUGUSTUS transcript 226721 230641 0.72 + . g74.t1 4_related_000040F AUGUSTUS start_codon 226721 226723 . + 0 transcript_id "g74.t1"; gene_id "g74"; 4_related_000040F AUGUSTUS CDS 226721 230641 0.72 + 0 transcript_id "g74.t1"; gene_id "g74"; 4_related_000040F AUGUSTUS stop_codon 230639 230641 . + 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MSWNINGHYLLNFLSSEFLNLLKSADVILLQETRLQSETCMKTPPGFTSFVRNRRRLDNDLENPWGGVATLVRNNLHC # RLRQDLSSPDLLVVDVNGTLIRNVYIPPESSRTNWRDWSDIDPWDAFVENTQVLMQLDTPSITGGDINARIGELLPHPGHPDRVSSDPTVSTRGRLLL # ALCNDHQLNILNGCSTVTGTHSSPTSFQHRRDCRGLPITLSTVIDYFIITPFLLPFVSELNVSPETKWSDHSPITLNIIAPGTSSMRESLRACPRRPM # IHLPLLTDIDFLQDGILHSEPRSHVSQLLGLYGHASHTLLPFPPLKIYTDGSCSNVGQPQARSGSGVFFGNPTHPLNTAARVTGKQTNNRGELVAVLI # ALQKSHSKRRVEIFSHSEYAICSIVYRAPKEAQANWTCTNGDILHTISLWLASREAPVIFHHVRGHSNNAHNDAADNLAKLGSSLPLPVPLSSLDFLS # LPAPPIFDPPTLSNIPKVSTSLPELPPEPPLQLHHTPAPLHPASHRGRSHKRTQQDIIRLKLSNAASAGSATFWRYYNDIRCTLPPTPKVSLQEITKT # FIPRMNPPDPTKSSFDPAHTAAEDARAHAIPFPSPPATHPVFNDPVCVEDIASIKSYLKRTSHSNSVGVDAATYDLLIDIDNDRLLPLFQRAIEQQDI # PSSWLTSTIIALAKPGKDASKTCNYRAIALESCVLKFASLLVHHKLCQALEQSHTIPPSQNGFREGFRTNNNAFILRTIIEKARSRGETIYAAFVDIS # NAFPSTNQSSLWNKLSDAGLTGKYFDWLRSLYNRMTYTIAHDGQLSENFHAFSGVLMGDPSSPTLWNIFLSTFNLSTDPEDVELATVVISHLEHADDI # VLISRGQAGLQHHLDSFETWCHNNALEISANKSWVMIFGHLPHVLPHFTLSAEILKFRDVVRYVGTFFQSTHRNIFASHYTEKRDSAIGSARAITGCD # LLIGNRRMPPAVTRQLYIALVDCHLTNGCEVMPDTDACLLQILEDIQIRFLRRMLGLSNNSVITPLYTETGIMPIRTRCATLCLRYLKYLMDLPNSHY # ASLALEENIKLHNSGSPCWLSDLDFAIAHLPGNHRLPSLHTLDGDRIDNLIKSVDFSTKSELQTHIDSWSKLSLLRHRLEPKEEGPAKAQIIGLRHYL # TQVSIHSHCRTITKLLCGDLTPQVFRGSPSPLRILTTTEQRTRLCRACKHQPETPQHIFFQCPSLPSIIALRSTFIATMRQFRPLPVNSVFSDATALH # YLKAFIFDWTLIVQTSKFIHDVVVRWQYYLDTGDDQHLDTSAVSDDRDSDEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g74 ### # start gene g75 4_related_000040F AUGUSTUS gene 233491 235502 0.48 - . g75 4_related_000040F AUGUSTUS transcript 233491 235502 0.48 - . g75.t1 4_related_000040F AUGUSTUS stop_codon 233491 233493 . - 0 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 233491 233735 0.97 - 2 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 233804 234241 0.96 - 2 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 234394 234784 0.82 - 0 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 234845 235186 0.57 - 0 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 235247 235426 1 - 0 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS CDS 235494 235502 0.99 - 0 transcript_id "g75.t1"; gene_id "g75"; 4_related_000040F AUGUSTUS start_codon 235500 235502 . - 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MADANALKDQGNKAFAAKDWDKAINLFSQAIAIDGSNHVLYSNRSAAYSGKKEWAAALKDAEKCIELNPTWSKGYARK # GAALHGSKSYDEAIAAYDAGLKIEDSAPLRKGLQEVKDAQGVFSQGYLYLSVMLIFPLAYDTRGQKEDNPFASMFADPNLIGKLATNPRTSKHLSDPN # FLQFYQKNPQMLDMNDPRMIDVLGALMGIDMQGFSRPEGSSEIPTNDNTSPSPSAPASSPPPKPSPSAPPTEDVEMEEIDDEEAKAKKEAEALKKSGS # EAYKKRNFEEAAKYFQQAWDVWPKDITFLTNLGGGYHISFALKLRADYKLIAKAYGRVGFSYQRKGDLPSAIKYYEKSLTEHRTPDILNKLREAEKIK # ADAERKAYIDPEKSAIAREEGNVHFKAGDFATAVKSYEEAIKRDPVDPRGYNNRAAAYIKLVAFPEALKDVNKAIEVDPSFVKAYIRKANVLLSMREY # AKALEAVQEAELHDEGNKNATELKQLEYKIQTALYEQRGEETQEQTLERAMRDPEVAVSSVLMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 4_related_000040F AUGUSTUS gene 248088 249524 0.46 + . g76 4_related_000040F AUGUSTUS transcript 248088 249524 0.46 + . g76.t1 4_related_000040F AUGUSTUS start_codon 248088 248090 . + 0 transcript_id "g76.t1"; gene_id "g76"; 4_related_000040F AUGUSTUS CDS 248088 249524 0.46 + 0 transcript_id "g76.t1"; gene_id "g76"; 4_related_000040F AUGUSTUS stop_codon 249522 249524 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MFGRPLAIASHHFDTSLPSYCDPAVDKTGRLFLPNIALFRLAFILGDIMDDAVSVRPVPYDSVQANDRALKQWMDNLP # SELNLDEYKVARNLASTNANLRRLGVQSVIIRTSYHHIRFTLHRPYASAGISQSAQSSSASSKSASDNKHSQSLEIAVGAASELITLVGQSRPDFLAN # SSLAVPGHMNWGPFHVFSAAMFFSFQLIANSDQPGASLFRASIKKAIHTLDTCRGIAVADKASDILFALAPLYSVDFHLQNKEKREKERARILSVVRN # LAFPYHDSHDPRRFGDSSPASNGSGRHIGNGSPIGSSSVSPPLTVVPASHARSDLPNMHSHAVYESSLHTHAAMSSMRTSSIYSHPGGTSNGQIQQSG # GGGHPSSPLSQPQMSPTVMSSNAQPMASMPSSASPNSYQPYITGAQPQVYSDSSRYAHYPHPGDDASMWGAAVGFGQREWSQFIDGFQPPPSGSSSVV # AHHRHLQG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g76 ### # start gene g77 4_related_000040F AUGUSTUS gene 251738 253768 0.6 - . g77 4_related_000040F AUGUSTUS transcript 251738 253768 0.6 - . g77.t1 4_related_000040F AUGUSTUS stop_codon 251738 251740 . - 0 transcript_id "g77.t1"; gene_id "g77"; 4_related_000040F AUGUSTUS CDS 251738 253768 0.6 - 0 transcript_id "g77.t1"; gene_id "g77"; 4_related_000040F AUGUSTUS start_codon 253766 253768 . - 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MATHPWPTDIDYVWTLSRDRVLRLWKPRIGCVVAKTLSHGVGRESSPISGRSSPGKPQVLLDAERQTLLRVFSFTGDD # DHFYILAFLPTLSSPMFGGSFQLLDTLSDQVNEVGVIQCSRHTAHCHLQDFMVIGNVLYTLWDRQGQSMVEKTMLDLSSVRNNGLSVWESALCAPETE # LTPANLEEVLMGKGSMADKYFDAVMRPNVFSTLTLRTAIDQYTDACLSLPGPPPNPLTVTYASLEENIAAVVGCTVNLNRDPSTGALQHDKYWNALKR # DWEGFIARCREIERSARWPLVLGAQGQGDVIVVERERISALVAEDLPIHLHQVLSHDLRIADSQYDLFGILWTLRHKVGAQTMLSLESCLVDLMHQEI # AFPFADILKDQAGQFHFKDNLDEGASLWLSGRLASIDSIDEAVRTSLDVIGGLDMGIKREEDEVELLLPRPDSDWFKGLTASYIMSSTNARYELCLCL # MSLLFFLVDDLSDWDPSLLAEVFAVFRGTATLRYIIQQPSSATTQTPLDDVSSADDVVSLLQNMQVSRNRNHSTPTYSLVHRLLIQTGDTSHVLPGAA # HRFLDNTGLLQSITPAVASKAEVSFCEKLRVLGYMHVSRELLSWLPRSPGVSYVLSRIWLNAGRVDDAAFILEKLAGCFGTYILYNLLFLWLTGIFDR # SRQRSWTRRP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 4_related_000040F AUGUSTUS gene 258746 260241 0.29 - . g78 4_related_000040F AUGUSTUS transcript 258746 260241 0.29 - . g78.t1 4_related_000040F AUGUSTUS stop_codon 258746 258748 . - 0 transcript_id "g78.t1"; gene_id "g78"; 4_related_000040F AUGUSTUS CDS 258746 259555 0.58 - 0 transcript_id "g78.t1"; gene_id "g78"; 4_related_000040F AUGUSTUS CDS 259609 260241 0.29 - 0 transcript_id "g78.t1"; gene_id "g78"; 4_related_000040F AUGUSTUS start_codon 260239 260241 . - 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MAKAMSQHFMDARLIENAADPSSNLFKDRGIYILTPKGLHVLERFISKNGINSDHLQNVFITQPICIKLLHLERRSAD # DEIIVSQSVITALFRRFVGRQANYPSQTTQPQDAFQRYNERARGVFLMDVTERAQPLLGKGQQHHKYCFAAVTALEWLCDFTSVVGREEAAEMAAQFV # RFGLITLVSDKRKNNDSAIIFTVRGSAPGGNSPVSQHGEFRCTAKAIYKITDEGRRVAHWDGSRPLGAHDSPNASSASLNAERSSVDNVSESGEKKGS # DAKIHRRISMAEKLNVNYQAAEKKNTKESNTERLNYILEEPSLRSLFREFLRSNFCEENLSFWLDVQDFKRKFNITSSAVAVNPPPRSGSRTTPGQAA # MERHHESLISTAFVIYNTYLAPSSTCELNIDHGLRNELVKYLDDVVTSLDGKPFAGKVEPEQANAFNATQLQTMIRLYERIQVHVFRLMATDSVPKVR # SISILVKNPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 4_related_000040F AUGUSTUS gene 261894 262352 0.78 + . g79 4_related_000040F AUGUSTUS transcript 261894 262352 0.78 + . g79.t1 4_related_000040F AUGUSTUS start_codon 261894 261896 . + 0 transcript_id "g79.t1"; gene_id "g79"; 4_related_000040F AUGUSTUS CDS 261894 262352 0.78 + 0 transcript_id "g79.t1"; gene_id "g79"; 4_related_000040F AUGUSTUS stop_codon 262350 262352 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MFIKDTQGIQALLEQLQHSQAWKDAVASSYPDGSPQHILDTPQSSSAPQAVSVAALLSQLQTEPHPNVVDTSQNHHLA # AFQNDASESSFSMTLPASNNSVHRVDDHRYLTFQQALPLIARKSASPLFAEALKAVRHYSIMGQAPLISIFCCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g79 ### # start gene g80 4_related_000040F AUGUSTUS gene 267210 267800 0.73 - . g80 4_related_000040F AUGUSTUS transcript 267210 267800 0.73 - . g80.t1 4_related_000040F AUGUSTUS stop_codon 267210 267212 . - 0 transcript_id "g80.t1"; gene_id "g80"; 4_related_000040F AUGUSTUS CDS 267210 267800 0.73 - 0 transcript_id "g80.t1"; gene_id "g80"; 4_related_000040F AUGUSTUS start_codon 267798 267800 . - 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MVNISDFNSIANLLLQVKVLDKSGQEIVSVGFDRFGFNSEVPIDALRSLYLRSHYVVTSTSDKVDGDSLDPDAEEQQH # AKFTKGLSAYQSKSIFYPEDNSISYTTLARFPPVKLLAPSQRKRVLVTGGAGFVGSHLVDRLMLLGHDVTVLDNFFTGSRTTVSHWVGHPNFELVRHD # VVEPFMIECDRTSDRFASSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 4_related_000040F AUGUSTUS gene 269461 269688 0.54 + . g81 4_related_000040F AUGUSTUS transcript 269461 269688 0.54 + . g81.t1 4_related_000040F AUGUSTUS start_codon 269461 269463 . + 0 transcript_id "g81.t1"; gene_id "g81"; 4_related_000040F AUGUSTUS CDS 269461 269688 0.54 + 0 transcript_id "g81.t1"; gene_id "g81"; 4_related_000040F AUGUSTUS stop_codon 269686 269688 . + 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MKFSDYVNRHQFLNSTFHSPNRYGSDLTPDQKDALLDVVRATPHAQISPEIRRELVNSVVRGAPRDDVSEDFEMA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g81 ### # start gene g82 4_related_000040F AUGUSTUS gene 279008 279547 1 - . g82 4_related_000040F AUGUSTUS transcript 279008 279547 1 - . g82.t1 4_related_000040F AUGUSTUS stop_codon 279008 279010 . - 0 transcript_id "g82.t1"; gene_id "g82"; 4_related_000040F AUGUSTUS CDS 279008 279547 1 - 0 transcript_id "g82.t1"; gene_id "g82"; 4_related_000040F AUGUSTUS start_codon 279545 279547 . - 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MADQSENSSSETSSLNHTDHAPENDNSMDSDLDYKAALTSSVPTAPLKQAHLRPKPQPIPPSDSNSHSLHPVDSHESF # DVPITGDPGTDNAKDPQMSFEEEDNGVSKEDEAVETAIWSILGHKWFGQGLMFMVEWVDNDVIWESLLNIKDCVAPDDYLVHHGLAEPSKLSKKMYLV # SRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 4_related_000040F AUGUSTUS gene 283194 284630 0.82 - . g83 4_related_000040F AUGUSTUS transcript 283194 284630 0.82 - . g83.t1 4_related_000040F AUGUSTUS stop_codon 283194 283196 . - 0 transcript_id "g83.t1"; gene_id "g83"; 4_related_000040F AUGUSTUS CDS 283194 284630 0.82 - 0 transcript_id "g83.t1"; gene_id "g83"; 4_related_000040F AUGUSTUS start_codon 284628 284630 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFATRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEISYSHLAATHTESPILELPE # PESPAENPHIEVPPEATLEQSESVAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIIPSKSPISSPVFFVKKKDGKLCFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VWEVLTRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g83 ### # start gene g84 4_related_000040F AUGUSTUS gene 284681 285832 0.91 - . g84 4_related_000040F AUGUSTUS transcript 284681 285832 0.91 - . g84.t1 4_related_000040F AUGUSTUS stop_codon 284681 284683 . - 0 transcript_id "g84.t1"; gene_id "g84"; 4_related_000040F AUGUSTUS CDS 284681 285832 0.91 - 0 transcript_id "g84.t1"; gene_id "g84"; 4_related_000040F AUGUSTUS start_codon 285830 285832 . - 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLREHFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHGPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLDRANAM # SSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g84 ### # start gene g85 4_related_000040F AUGUSTUS gene 290556 291991 0.91 + . g85 4_related_000040F AUGUSTUS transcript 290556 291991 0.91 + . g85.t1 4_related_000040F AUGUSTUS start_codon 290556 290558 . + 0 transcript_id "g85.t1"; gene_id "g85"; 4_related_000040F AUGUSTUS CDS 290556 290574 0.99 + 0 transcript_id "g85.t1"; gene_id "g85"; 4_related_000040F AUGUSTUS CDS 290630 290751 0.91 + 2 transcript_id "g85.t1"; gene_id "g85"; 4_related_000040F AUGUSTUS CDS 290843 291991 0.94 + 0 transcript_id "g85.t1"; gene_id "g85"; 4_related_000040F AUGUSTUS stop_codon 291989 291991 . + 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MPRIRKKTSKRGSTNDRKKISQKVRESRKKKTKAAKKSVEWKSSKIAILAEVAEQRRLVTSSHHQLDSKLKLIVTNQA # AEEKQHRKDEKKRALKHVAEDAQDDNIEEDDGIASISAKRLTAKATSKPAPEAEESEGEDEPPILINRNLPHLHAVLDEADAVIQVLDARDPLSFRSS # YLEDLVHSKPGRKTLFVLNKIGTSLIYVPRAKSSVENGFTDCVPHESLVAWTSALRKQQPTFPFRSASSFLPGNPLAQLNTKGKGRAKNPVDDALGGD # AVLECLGHWAAEKENGSSLTVAVVGVTNVRHPSTVLNFQIIKHVLWQTGKSSLINSLAKTTVLPVYSLASSPRGPTTTTMPQEITIQVAGNRTLRVID # TPGYSWKIDKASSDWDEVRARDILLRNKGRIDRLKDPSGPGVSLCTQYTYLSLMEFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 4_related_000040F AUGUSTUS gene 292246 292929 0.98 + . g86 4_related_000040F AUGUSTUS transcript 292246 292929 0.98 + . g86.t1 4_related_000040F AUGUSTUS start_codon 292246 292248 . + 0 transcript_id "g86.t1"; gene_id "g86"; 4_related_000040F AUGUSTUS CDS 292246 292929 0.98 + 0 transcript_id "g86.t1"; gene_id "g86"; 4_related_000040F AUGUSTUS stop_codon 292927 292929 . + 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MPSSNLVVDTPSTDARLQALYAKADEALASLKSRKAMRKAGGLVKISPGQVESREVISEVPYAELMETSDGEDNDGID # VDEANHIEAEEDEDEESEEDEDEEDGDKEEVENEEELEFEDEEVEVAPPASKSQKRKRADPISHPPNKKVSFVAKSHASKNKAISKADVSAVSESSTP # KSLSANPTTRKALKSSLKKMKPIANASSKNRPPKIRSDEGNRESYDFGKYF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 4_related_000040F AUGUSTUS gene 296004 296501 0.91 + . g87 4_related_000040F AUGUSTUS transcript 296004 296501 0.91 + . g87.t1 4_related_000040F AUGUSTUS start_codon 296004 296006 . + 0 transcript_id "g87.t1"; gene_id "g87"; 4_related_000040F AUGUSTUS CDS 296004 296501 0.91 + 0 transcript_id "g87.t1"; gene_id "g87"; 4_related_000040F AUGUSTUS stop_codon 296499 296501 . + 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MPRENRKRGKKHKFKTTDETIPYASSEPQAELEPQVGPSWIVTASGEDSEFNPEAPFGYVDADVKAYFRTVDLQIREW # QEGQQEHLDGDANVDPNAGQNDRNQNLIHCLILFTEKHMFFVAALSEMREKEKQLATDPDCSIILERMAYSMDDFVRRVFLDSLSGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 4_related_000040F AUGUSTUS gene 299384 303213 0.41 + . g88 4_related_000040F AUGUSTUS transcript 299384 303213 0.41 + . g88.t1 4_related_000040F AUGUSTUS start_codon 299384 299386 . + 0 transcript_id "g88.t1"; gene_id "g88"; 4_related_000040F AUGUSTUS CDS 299384 300168 0.43 + 0 transcript_id "g88.t1"; gene_id "g88"; 4_related_000040F AUGUSTUS CDS 300282 303213 0.82 + 1 transcript_id "g88.t1"; gene_id "g88"; 4_related_000040F AUGUSTUS stop_codon 303211 303213 . + 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MREFNHNLINSSDDDKVQNIIYHAQCLTYTPPEPDELIILEPPTELDPVLQRTSLITSELQTDIPLLFASLYSLLALF # LTSTTFRIVTSNLFLLARQYFSSSLVEGVRKVEHAAEIVARAAETTQNLTECAVNLVDQVHVAAEGVGLSAMGIGDVARDTERVALLAISEGGPLHGL # EGLKDHTHEITEHTICEVQARQKEHVARQQDMKEPTNNFVDESQRRQEQHLDADRAKAEASQTEDRKDAIIEAIQQVLSALLLILIALCALRLRNPGS # YIPELDLSDSDTPQWRHLTSILAASKELLDRLTRSGNHGGSLDSLLRAFRDVVVLPLDEFDQNEEFDGPSSQIKKRNESSLLFEIATSVNLIADSALG # TGTSQNSDTEQVEYIASNLFRSDTRVLVEKVREVKRETGSSSSPFLNSNHIESHPIPTPKLHIFYQELETFLAALYDDRSSQRLARALVTLGRDIQSY # FQPSSHLLGEDLRRSSKTTPLSSILTTVLNDLIGYLIPKVVGGVMDYLFSQKNIAMTRPTTNHSYDPNPDATYSESVRREQRFPLPLPRVELVSDTST # FPSSSSLLPTGSEFSGTTTASRWLEGALDMRLMHIRISDDKEMESQWKEDRLTSCFRWCCCSSPPSDITDPYVNAEGGYGAAYMRTTELERELGSRTR # NQTDLANLLTPSSISITQWNETRVDFFSSHTKTMVVDAEPLLIDLNVPGEDMNHEVPVQAPTLVGFDVATTSASPVTVPSTSPLRAPLNDMDRDPASE # DPYIDSDDQRGHLLALVQDKSFEERSRSRGGRMKTEIKTLHKIRVHIEGILSSLPSILNEPNHTSRGEPANPHLSVTSKVTQRLTLENIAYYARYNVL # STVFGTWLGVRDEGVLDLEFEFQDINGNIMGAAKDDGAFLDVDIDLDTSTWLENLFSLDDSGDESDPEADLPFRASNVRFVLPHTLNITPRLRTLPCS # TLLSMLTSLPRQILLALLLRPVVLPLAKLVIRRELESAFAQGIERGCNFVVGLTVRVFRGAKRRARKRAAKIKSEADVLATEGRMTAPPDLYGSQVSF # GDVWASIMEVLGEITAVEEGPETIVHTKMKEARARGVQVEHTVVELDGNSHESDRSQRELDQRVKDKLVATNTTTIAIGIAPQLLPDKADLVSNVLPS # TEPTEVVDGVIGAIVQDAVDQAGEVVKDGLEHAADVMQGAQNVVQKAADVAEGVREGIDEGRQRAEQMEEDEWGWRSVAFDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 4_related_000040F AUGUSTUS gene 305792 306797 0.34 - . g89 4_related_000040F AUGUSTUS transcript 305792 306797 0.34 - . g89.t1 4_related_000040F AUGUSTUS stop_codon 305792 305794 . - 0 transcript_id "g89.t1"; gene_id "g89"; 4_related_000040F AUGUSTUS CDS 305792 306091 0.86 - 0 transcript_id "g89.t1"; gene_id "g89"; 4_related_000040F AUGUSTUS CDS 306156 306797 0.35 - 0 transcript_id "g89.t1"; gene_id "g89"; 4_related_000040F AUGUSTUS start_codon 306795 306797 . - 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MLHGPADLFVNSLQTVLLAKQVYPYLRGNVHAQTSPPAAFDIQKTVVHARKLVGLFEANGIPKYVLAYLFKCGVELIA # LIGRRSRVCIKIPTTAEGMVACAQLKTEGIQTLATCLFNVPQALAAHQAKCVYVAPYFNGIIAFFILILAHKVNAYYYFVTFQELRVHFEPTIWREYA # APGKEHPMSQVIFDVKAIYGKVGSKTKVMPASIVTPREVIGLVSLKPDHLTISGGILDKLAALPQVAPQDLDSGLKITEFAEEILSADYLASDGILLK # EALEKDVESTRKLNDALKLFDEAEKKTKEYIHEIAMKEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 4_related_000040F AUGUSTUS gene 311752 312906 0.64 + . g90 4_related_000040F AUGUSTUS transcript 311752 312906 0.64 + . g90.t1 4_related_000040F AUGUSTUS start_codon 311752 311754 . + 0 transcript_id "g90.t1"; gene_id "g90"; 4_related_000040F AUGUSTUS CDS 311752 312906 0.64 + 0 transcript_id "g90.t1"; gene_id "g90"; 4_related_000040F AUGUSTUS stop_codon 312904 312906 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MNMDKGITLFRNILTFAFLLSLFLHRVEGETLGQTWKAEASITPIARCQEVIGYLLPRDSSNSLVNAPLTFPLTTDST # STPPAFTFTNTITSSASSTVVPPPSFPITSTRSVPSFTPTSSSTITSPVSTSTDSTAPSSSETQSSSSSSMTSSETSSSSQSTSISSSTTPPSSTSSS # SSVSLSSTSPPASTSTSPPLSSTQSTTVTSSTTIQSTSALSPSTSAPSTQSITGTSSPATPNHTSSSSSSNLSPSGTTSSPILTSSPVSSTISQSSNG # GTSTSSTSSATQSVSIVSGSQSMSISDTSSSGTISSSQTFSTTSSPVITGSFSATSSGSSALAHSSGIISGTGTGPGTSENLSTTGSGSSTLRSEFYS # SKSENQNSYHHT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g90 ### # start gene g91 4_related_000040F AUGUSTUS gene 313185 314672 0.99 + . g91 4_related_000040F AUGUSTUS transcript 313185 314672 0.99 + . g91.t1 4_related_000040F AUGUSTUS start_codon 313185 313187 . + 0 transcript_id "g91.t1"; gene_id "g91"; 4_related_000040F AUGUSTUS CDS 313185 314672 0.99 + 0 transcript_id "g91.t1"; gene_id "g91"; 4_related_000040F AUGUSTUS stop_codon 314670 314672 . + 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MNVFGQRLELGETPAAWWRLAEPGNNIPTSTNREPGLIKTSNEEKRWHQNQNEVPSSSEKRSVYAIAASVVGRVGVTN # NLSHNNNLGALFSDDEKEGLNNHFEGGRRTRGGPISTLAASVAKRTHLPLDRQNHRSGSDNRELEHTLPPSSSSTPISHSSPPSSYFTPSRNHTPFPS # FPFTFYRVSNSSSRNPSISPVQDVPATASVTDTDVSDQISYLEPVSHNRLIDVLDTEVQIPDQRGYIPIVRTDTRDTTGSSTYSASGMEYIPFMRRDT # ETDSYVQTAPITPSTRSLNLTRTHTSQSSKSNIVDSQPSSPYENASGIFRASQDSLHSRDTHDTRNTSNTYATQSTVDTTSSLTFAQPKVIRMLASHG # NETTLKDETREIPLITSTFHYSPDPEDEKDNAVGPRPSSNGVSAPSSSSKNPFNPSHPLFQPGPPNFADQGNLEGDSFLRTLEWRRRAVAYADGTGQR # PSLMEAVEVYFSSNSITTDSSPGSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 4_related_000040F AUGUSTUS gene 327123 328044 0.7 + . g92 4_related_000040F AUGUSTUS transcript 327123 328044 0.7 + . g92.t1 4_related_000040F AUGUSTUS start_codon 327123 327125 . + 0 transcript_id "g92.t1"; gene_id "g92"; 4_related_000040F AUGUSTUS CDS 327123 327383 0.87 + 0 transcript_id "g92.t1"; gene_id "g92"; 4_related_000040F AUGUSTUS CDS 327436 328044 0.79 + 0 transcript_id "g92.t1"; gene_id "g92"; 4_related_000040F AUGUSTUS stop_codon 328042 328044 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MLANAQFAKKKANLKGKTRPIKSNMGDSCNVAHDDGAHAHQVGFGEGTTSEDLDIPLDVHHFMSNRRDHPVHLTPFLL # QQHSDPATKNFVSKLEDHLLGRLKEIPFDGDYEFTAEERRDIIIAEDKIHAVKTLRINYTTYDVRRDHDVINPHTDHSTIMLKSPDTNPNAHPYWYAQ # VLGIFHADVIHCDSKLGLIRSRKRMEFLWVRWLGTEPDYRPGQKFAKLPKVGFVPEDDEFAFGFLDPSQVIRACHLIPAFIHGKSNDLLATRLPTAAR # KVGESEDWLNYYVMM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g92 ### # start gene g93 4_related_000040F AUGUSTUS gene 328110 328421 0.73 + . g93 4_related_000040F AUGUSTUS transcript 328110 328421 0.73 + . g93.t1 4_related_000040F AUGUSTUS start_codon 328110 328112 . + 0 transcript_id "g93.t1"; gene_id "g93"; 4_related_000040F AUGUSTUS CDS 328110 328421 0.73 + 0 transcript_id "g93.t1"; gene_id "g93"; 4_related_000040F AUGUSTUS stop_codon 328419 328421 . + 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MFMRYHGGAIGHIDIRQCRDIDLIPEGDEDDDMGNVDFTGPEDILTPNFDSDFEDGSDRSEENAGSDDSEAGNQIWLY # NYLAPGTEESANESSDIDNEDYDIE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g93 ### # start gene g94 4_related_000040F AUGUSTUS gene 330914 331252 0.93 - . g94 4_related_000040F AUGUSTUS transcript 330914 331252 0.93 - . g94.t1 4_related_000040F AUGUSTUS stop_codon 330914 330916 . - 0 transcript_id "g94.t1"; gene_id "g94"; 4_related_000040F AUGUSTUS CDS 330914 331252 0.93 - 0 transcript_id "g94.t1"; gene_id "g94"; 4_related_000040F AUGUSTUS start_codon 331250 331252 . - 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MAQTSRRPHLDFSVQDSSPAPVAASYVLGEISVSEGMDGLSNGSGGVDQFEGFEGTDSVPSSAMEGGHRNGFGGVAQG # HGHRHAHGGWFDLSRYWGDDQEEEDEKRDFIVFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g94 ### # start gene g95 4_related_000040F AUGUSTUS gene 332562 334187 0.66 + . g95 4_related_000040F AUGUSTUS transcript 332562 334187 0.66 + . g95.t1 4_related_000040F AUGUSTUS start_codon 332562 332564 . + 0 transcript_id "g95.t1"; gene_id "g95"; 4_related_000040F AUGUSTUS CDS 332562 333143 0.85 + 0 transcript_id "g95.t1"; gene_id "g95"; 4_related_000040F AUGUSTUS CDS 333393 334187 0.74 + 0 transcript_id "g95.t1"; gene_id "g95"; 4_related_000040F AUGUSTUS stop_codon 334185 334187 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MSFSQVGGHPNSIQLTEDGSLLIKPALPLEHEFYTLMAQARAMDSMGLAGGEGDGVGNERALNERTLHGLKNLKRLSR # FVPEFYGTLREESIDVETLNADSKDIGDGGIGAMMFKDTSNAMVDAVALNKSSRQHLVLSNLLHSFTKPNVLDLKLGTVLYDELDLECSEAKKARMIK # TARETTSGVCGIRITGFQSLKKEQLPEGMRRVFPVLGEPVPIAIPETTSAAGSASSSGSSTPFEAYTSSTASSNVPYSDSTFKQPRTNLGLPPDLLLP # ILRSIHTSLTHLHSIMQGVELRMVGGSLLVVWEGDEQRAREGVEWMKEREIKITERIRQEADVEGNEDDDSEYLDSDDDDEGGTSSDEDNENVSAHEP # SPDSASALTDETNIASRSTSRPSSKSHRRKPSAPYALSLIDFAHTRFVPGQGPDVGVLLGLDTFAKLIEGRILEVEDIEVGRQGSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 4_related_000040F AUGUSTUS gene 336102 337568 0.85 - . g96 4_related_000040F AUGUSTUS transcript 336102 337568 0.85 - . g96.t1 4_related_000040F AUGUSTUS stop_codon 336102 336104 . - 0 transcript_id "g96.t1"; gene_id "g96"; 4_related_000040F AUGUSTUS CDS 336102 337568 0.85 - 0 transcript_id "g96.t1"; gene_id "g96"; 4_related_000040F AUGUSTUS start_codon 337566 337568 . - 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MVSKPRSISGSPPPSASSSSSKQPPSIQRQNRSDFDLEPNPFEQSFAPRSANHSNVRGERAAKDKTGRNGKSDKKVQI # EDDLGPPSNESILTIKSGSSADREADDHQQRPQSRTASVPNSNVSNNGSISPRPMLPPVAAISSPADQSSSFGHPWAATGFNSSLRSGPLSPAMLTGP # QDPNAPSSNLSNPLSTLAPPGLQFDPSSFRTGLTPRTGLTPRTGLTPALNGLSGTGLTPLVGGPVSFPASPGTAAFLALMHNSGMNNLNGVNGVGPGG # TITPNTLNAITGVLNNSQGQIQGQGQPGQGQQQQNSYTNPPTVPSHLHHSHTHSNNENTNPHNNSYLDSANNATSTAANGLFLLSQAHQELTKREEEQ # ARANSAQTNTNGNSNGATGKRGSKRKNSEAINGNAGTITNRSSKRAKPSGGRRKQASPEFEEFDPEDDGDDDDDDEVMREMQQQQTTTGGRGRNKKPE # TEEEKRKNFLERNRQGRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 4_related_000040F AUGUSTUS gene 338952 340967 0.9 - . g97 4_related_000040F AUGUSTUS transcript 338952 340967 0.9 - . g97.t1 4_related_000040F AUGUSTUS stop_codon 338952 338954 . - 0 transcript_id "g97.t1"; gene_id "g97"; 4_related_000040F AUGUSTUS CDS 338952 339768 0.9 - 1 transcript_id "g97.t1"; gene_id "g97"; 4_related_000040F AUGUSTUS CDS 339982 340967 0.9 - 0 transcript_id "g97.t1"; gene_id "g97"; 4_related_000040F AUGUSTUS start_codon 340965 340967 . - 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MRRTSIQSRRVSASHIPAPGSRILSYGSGGHSRLSGFGLGPAAGVGVGGLGVKAGIDDADLNERINKAVEAEVKRRLE # EKEAQRREEEEAREKQLQQEKSRPHITPSSSSSSTSSKQETHTADVIMEMVTTENVEEKEIIEVEVEEAEVETELLVVEAMDVDQNTSPMKVDSVGPE # IHGIPGDSDDNNNDEEKRTMDDIERNYKEHIAHLEAQLAAASSSTSTSAAASTSSSAFIADGSASMFSASTSSSTSLSMSASAPGTESMSMSSSAHIS # GTSDILRNSQTSLTAAAAGLLDSTDDAESVARMNLAERKKMGKIYVDLARGYSANIIDVEWAVRNGKSYVPTPKRQHPREGEELKLKSKSSRSSKSHR # SSHSISRHEEMSKENSSSNSNTNSESPRKSSSADTRLEPERTSQLSLTGSKRKRSVSREPADHSDSEYVFIPSLSSSTSHGHGFGKDLGNIDEEVEAE # TETAEAEADEFGVTRVAKVLRRSPRKKQLPQQVSTITTLGTMKSPSTVSDKRKMLGMSLNGKTGVGGVDISGSVYRTPSGGIGGSTTPKRGHANGSER # KTRKVSDLVYSGLGGLGSQDVGLDVMKMGSGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 4_related_000040F AUGUSTUS gene 341781 342422 0.69 - . g98 4_related_000040F AUGUSTUS transcript 341781 342422 0.69 - . g98.t1 4_related_000040F AUGUSTUS stop_codon 341781 341783 . - 0 transcript_id "g98.t1"; gene_id "g98"; 4_related_000040F AUGUSTUS CDS 341781 342422 0.69 - 0 transcript_id "g98.t1"; gene_id "g98"; 4_related_000040F AUGUSTUS start_codon 342420 342422 . - 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MSTQPVQIVARIRPPLLNEHTDDAISVVPIPADHTLSAARPIPFTSWVSVSSTGTKTGTTQVQNSQTAFHTAFGPDTT # QLELFDTAVAPHLAPLLKGHTLTILAYGPTSSGKTHTMEGSPAEPGIIPRSVRVLFEMGEEGKESGMISSFEVHMSYLELYKDDAFDLLVSQRTHEKL # PIRTNAKGETFVVGLTRVPIKSFDDWKNVFRCDCFLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g98 ### # start gene g99 4_related_000040F AUGUSTUS gene 358857 359582 1 + . g99 4_related_000040F AUGUSTUS transcript 358857 359582 1 + . g99.t1 4_related_000040F AUGUSTUS start_codon 358857 358859 . + 0 transcript_id "g99.t1"; gene_id "g99"; 4_related_000040F AUGUSTUS CDS 358857 359582 1 + 0 transcript_id "g99.t1"; gene_id "g99"; 4_related_000040F AUGUSTUS stop_codon 359580 359582 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MYLGELTRGVLVALVDAVVRGDAVVRGDAVVRGDVVGGEQTQAQTQAQGEGEGESKQGTEVRLRKTHSLLFNGLSTRV # LNEKWALDTSVMSEVEEAWEAVDASSGTTMNGGTGEGTTLETGTEGMRNGVMEGGSVEGTPNEIGENPLWDGDDSGGLPDWEFLSGFDFTTTTTTTTT # TNTTTNTTTTSPSSANTALANTKLANTNTKLRTKLERVRQVVLRRLGYEDGEVRLRDAAVGFFCF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g99 ### # start gene g100 4_related_000040F AUGUSTUS gene 365856 366233 0.97 - . g100 4_related_000040F AUGUSTUS transcript 365856 366233 0.97 - . g100.t1 4_related_000040F AUGUSTUS stop_codon 365856 365858 . - 0 transcript_id "g100.t1"; gene_id "g100"; 4_related_000040F AUGUSTUS CDS 365856 366233 0.97 - 0 transcript_id "g100.t1"; gene_id "g100"; 4_related_000040F AUGUSTUS start_codon 366231 366233 . - 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MRTPEFPQGRRVVVVANDITYKIGSFGPMEDQFFYLVTQYARELGLPRIYLSANSGACIGLAEEFIPLFSAAWNEEGH # PEKGVHYLYLTHENYLKLEEQGHDSIKTIDVEVAGELRHKITDIIGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 4_related_000040F AUGUSTUS gene 368045 368392 0.97 - . g101 4_related_000040F AUGUSTUS transcript 368045 368392 0.97 - . g101.t1 4_related_000040F AUGUSTUS stop_codon 368045 368047 . - 0 transcript_id "g101.t1"; gene_id "g101"; 4_related_000040F AUGUSTUS CDS 368045 368392 0.97 - 0 transcript_id "g101.t1"; gene_id "g101"; 4_related_000040F AUGUSTUS start_codon 368390 368392 . - 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MFRTQLSAIYDVLDRFTGGLKGHEIKFWSNLLEKYEATERMFGGSIEARILTLREQNKDDIDKVISLVLSHIKVSSKA # KLVLTILNHIKTKGISVSNAESPLYKVLQDLASLEAK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g101 ### # start gene g102 4_related_000040F AUGUSTUS gene 374057 374608 0.73 + . g102 4_related_000040F AUGUSTUS transcript 374057 374608 0.73 + . g102.t1 4_related_000040F AUGUSTUS start_codon 374057 374059 . + 0 transcript_id "g102.t1"; gene_id "g102"; 4_related_000040F AUGUSTUS CDS 374057 374608 0.73 + 0 transcript_id "g102.t1"; gene_id "g102"; 4_related_000040F AUGUSTUS stop_codon 374606 374608 . + 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MDRYFKRMPVEKPIIRNNYFFQVIPPEDIRHPLNAAAQSSAKPIIENDSTVDPEELAWSTTTNGSEETFNHGHPITPD # VRPTVAAENLRLRTERQTLRRLPLSGAIVFGIRTYLFPVEELAKEPGIPARMASAMRSWPEDVRKYKGNGLYEKVMLEYLDKAAKEQLEVGGEELMKD # TGKGYPF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 4_related_000040F AUGUSTUS gene 377630 378727 0.77 - . g103 4_related_000040F AUGUSTUS transcript 377630 378727 0.77 - . g103.t1 4_related_000040F AUGUSTUS stop_codon 377630 377632 . - 0 transcript_id "g103.t1"; gene_id "g103"; 4_related_000040F AUGUSTUS CDS 377630 378480 0.99 - 2 transcript_id "g103.t1"; gene_id "g103"; 4_related_000040F AUGUSTUS CDS 378586 378727 0.77 - 0 transcript_id "g103.t1"; gene_id "g103"; 4_related_000040F AUGUSTUS start_codon 378725 378727 . - 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MFWDHNAKWAIQAVGASHIDFRFSIHQPTVGYCHFQEGISGLKQVTGRQAQRFSQASSLQVQTALKEFHENKSVILEL # KARVNPKGKSIDHWEIPELEFMQSVEPSICASGSIMQWTADIMEHAHITLVKDPAQSGNNHDFEIQICRSLDCLDHVRRFDLMTAMKDASIDFRLENV # EGDEGQEQGAEGLQVDEEEDTELEITKILSTEKLVTHLNPVSKKLFRSFRPKQNFFLKARLLKRAPSAPLPHRSFVNNVTGEISAFSLVRDPDLTTQT # IEEVSRLYSLSDFHGACSDLIDCIKSGTKIFTVGGKRTGNTQSPLPFYWVKLWSRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 4_related_000040F AUGUSTUS gene 383459 386447 0.35 + . g104 4_related_000040F AUGUSTUS transcript 383459 386447 0.35 + . g104.t1 4_related_000040F AUGUSTUS start_codon 383459 383461 . + 0 transcript_id "g104.t1"; gene_id "g104"; 4_related_000040F AUGUSTUS CDS 383459 383474 0.49 + 0 transcript_id "g104.t1"; gene_id "g104"; 4_related_000040F AUGUSTUS CDS 384478 386447 0.58 + 2 transcript_id "g104.t1"; gene_id "g104"; 4_related_000040F AUGUSTUS stop_codon 386445 386447 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MTNDQRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTSESSRPSSSQIPTEESRESSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIETVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQ # SHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWIMPEGGDSKRYKLR # DNARMPRDDPNVPRYKKIEQMVKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 4_related_000040F AUGUSTUS gene 386477 387913 0.99 + . g105 4_related_000040F AUGUSTUS transcript 386477 387913 0.99 + . g105.t1 4_related_000040F AUGUSTUS start_codon 386477 386479 . + 0 transcript_id "g105.t1"; gene_id "g105"; 4_related_000040F AUGUSTUS CDS 386477 387913 0.99 + 0 transcript_id "g105.t1"; gene_id "g105"; 4_related_000040F AUGUSTUS stop_codon 387911 387913 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDWPLKKPSVTIE # DVNESDDEDAIKLIPSSRPMNQINSEHRPYDHVQPRMYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQADMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDLK # GNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 4_related_000040F AUGUSTUS gene 388450 389764 0.68 + . g106 4_related_000040F AUGUSTUS transcript 388450 389764 0.68 + . g106.t1 4_related_000040F AUGUSTUS start_codon 388450 388452 . + 0 transcript_id "g106.t1"; gene_id "g106"; 4_related_000040F AUGUSTUS CDS 388450 389652 0.89 + 0 transcript_id "g106.t1"; gene_id "g106"; 4_related_000040F AUGUSTUS CDS 389708 389764 0.68 + 0 transcript_id "g106.t1"; gene_id "g106"; 4_related_000040F AUGUSTUS stop_codon 389762 389764 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MARYEVLKRGTESFQRSQPSFEKVRYESRQRKKGKAQDLKDRKENVQPDLVNEPPTNKLEERIKLNQQDRSPINLIDE # TNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFQIERHIHGDPLLELPELSKHPKPFVPTGRCTEERKEIMDKNHPEGFLWEQERE # LMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLE # PLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQLSRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDD # VPVKGPSTRYELPEGGYETIPENPGIRRFVGPSVEPKHFFVVRKQLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # # ----- prediction on sequence number 3 (length = 67959, name = 4_related_000137F) ----- # # Predicted genes for sequence number 3 on both strands # start gene g107 4_related_000137F AUGUSTUS gene 5244 6170 0.58 + . g107 4_related_000137F AUGUSTUS transcript 5244 6170 0.58 + . g107.t1 4_related_000137F AUGUSTUS start_codon 5244 5246 . + 0 transcript_id "g107.t1"; gene_id "g107"; 4_related_000137F AUGUSTUS CDS 5244 6170 0.58 + 0 transcript_id "g107.t1"; gene_id "g107"; 4_related_000137F AUGUSTUS stop_codon 6168 6170 . + 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MSDDEEKKILLRSATAALKAGGDLVFSVKVCLNQSLGERPFIINVPHLGESGSAEAFHTASYSSSQTILSLNHSPTMN # DYGVDEEEDVTIQPLNAPNLRPDASSGSESSSSGRVSKTLSMRLGETAVTDPDEPKALTPLIISKAIVNPALCSPTSLARTDDGTTWEGSTRNHPLSL # EDKIIYGELPTVPSEPTAPIPLTFSNSAGYMFSHDYAVNDIAYNSDGVLVGATLAVLVEKLTPHNSIVDPAFSAVFFMRFRLFCTPLEVVEALIARYN # LVPLLAYLMMISLYGSKEKGSRYSYMSQISSSFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 4_related_000137F AUGUSTUS gene 8017 9648 0.72 + . g108 4_related_000137F AUGUSTUS transcript 8017 9648 0.72 + . g108.t1 4_related_000137F AUGUSTUS start_codon 8017 8019 . + 0 transcript_id "g108.t1"; gene_id "g108"; 4_related_000137F AUGUSTUS CDS 8017 9648 0.72 + 0 transcript_id "g108.t1"; gene_id "g108"; 4_related_000137F AUGUSTUS stop_codon 9646 9648 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MSDPVGQVRVCYTPLASAIVDTPEASLIACTGGKTSPFTRAIYKDFGDGKLHPPRLATATLEAIDSIQARNIFPQDLP # AYQRASVTARTNGVVSPFWRDWPLAEPCEFLTPEPLHYWHKMFWDHDAKWAIQAVGASHIDFRFSIHQPIVGYRSFKEGISSLKQMTGRAQRDVQRYL # IPLISGAVIPKFVTALRALMDFRYAGQAPRFNQASTLRVQTALNEFHENKDIIQDLKARVNPKGVPIVHWEIPKLEFMQSVAPSISASGPIMQWTADT # TEHAHITPVKDPARSGNNHDFEVQICRHLDRQSRVRRFDLVTAMVDAGVDFRLDDIEGDEGRGDIGHDREERDERDEEDKEVDAKISSSEELMTRLHP # VSQKLFGSFRPKQNFFLKARLLKQDASALLPLCIFTDNISGEISAFKVNRDPDLKTLTIEQVSNLYSLPDFSGACLDFLERIQAKTQTFVIGGRRSLN # QSISLPFTRVKVWSRIRIQTKTYFNTDLLADSHTIFAAPPSPGWEFGRQNAAVVNINSSFEWPRSSLEGGLNT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 4_related_000137F AUGUSTUS gene 11563 12592 0.28 + . g109 4_related_000137F AUGUSTUS transcript 11563 12592 0.28 + . g109.t1 4_related_000137F AUGUSTUS start_codon 11563 11565 . + 0 transcript_id "g109.t1"; gene_id "g109"; 4_related_000137F AUGUSTUS CDS 11563 11858 0.31 + 0 transcript_id "g109.t1"; gene_id "g109"; 4_related_000137F AUGUSTUS CDS 11956 12592 0.61 + 1 transcript_id "g109.t1"; gene_id "g109"; 4_related_000137F AUGUSTUS stop_codon 12590 12592 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MSIEQDPSVPAPTSKKDASKPRRRFIGSKSSKPTSSSNPSNSVLRNQIPAEIIEDPQLNAIIEKVLPRNYSFEIHKTI # HHVRKNGSKMVALQMPEGLQIFTPALTTIMGDVTYGACCVDDYTALALGCDMLIHYGHSCLVPSNFTQEIKTLYVFVEIGIDSVHVHQTIRANLPSDR # DAFQDALMTIGMGEGGEQEIKAGERIPIAGPGLRIEASPHKSVEEKDRDVAVILAEQKDLNPTRLALVSTIQFVAALQRLKEDLSDPYIPSSTSATPL # WTFPYETTIPRSKPLSPGEILGCTAPKLGEEVDAIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 4_related_000137F AUGUSTUS gene 15222 16737 0.26 - . g110 4_related_000137F AUGUSTUS transcript 15222 16737 0.26 - . g110.t1 4_related_000137F AUGUSTUS stop_codon 15222 15224 . - 0 transcript_id "g110.t1"; gene_id "g110"; 4_related_000137F AUGUSTUS CDS 15222 15959 0.41 - 0 transcript_id "g110.t1"; gene_id "g110"; 4_related_000137F AUGUSTUS CDS 16108 16737 0.26 - 0 transcript_id "g110.t1"; gene_id "g110"; 4_related_000137F AUGUSTUS start_codon 16735 16737 . - 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MKVLSKKEIVAKKEVAHTIGERQILQRSLESPFLVGLKFSFQTEHDLYLVTDFKSGGELFWHLQRETRFSEERARFYV # AELILALEHLHKYDIVYRDLKPENILLDATGHVALCDFGLSKANLRADELTTTFCGTTEYLAPEILLDEHGYSKIVDFWSLGVLLFEMCCGWSPFYAE # DTQQMYKNICFGKIRFPKGVINEDGKQFVKEVSIKVTPPFKPVVESDESTSNFDPEFTEKSIADVGLNEDDYADFAEDDPSESWVSQSLGASSFLPGG # HVHNGPLGSEKTGKTPPMTPISPMTTVTTLPNGTAHTTHKSTKHKSSRSGGGLSRNGSSASAKSNRSSKSSLNRVANGIDIHANGRQHKKQRQPAGTP # LTNSVQENFRGFTYSGGESVSSHADIFASRKVEDDDNDEDYVDVDEEPEGGTEDEFEDFGKSAGRYANLRKKGMGFTDLDDMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 4_related_000137F AUGUSTUS gene 18432 19244 0.83 - . g111 4_related_000137F AUGUSTUS transcript 18432 19244 0.83 - . g111.t1 4_related_000137F AUGUSTUS stop_codon 18432 18434 . - 0 transcript_id "g111.t1"; gene_id "g111"; 4_related_000137F AUGUSTUS CDS 18432 19244 0.83 - 0 transcript_id "g111.t1"; gene_id "g111"; 4_related_000137F AUGUSTUS start_codon 19242 19244 . - 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MLKFWPTSPSPMDQLTPRVDAGGHERNPFDDLPQSPSIGAYHPLLTPTRISSAHSPFIPPSAYKEVDLTPGPHGPPTQ # TGAHASFAASLPTTSLSLHAPDFNMQLPPPPARDKSRPSPNKSSATSSSATQASPMITSSAPKEASTPISRGQIHVKLIQARGLNVRSMAAQPYVVVQ # FEQNEFVSRNPTDETDKEVKGTATNLSLSRPSSSNAINALAAVDAAVKRRSRGCSGSKDNSPVSSVGSKTSALNGGLFGRLSAHNPVWKHEVSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 4_related_000137F AUGUSTUS gene 26820 28564 0.58 - . g112 4_related_000137F AUGUSTUS transcript 26820 28564 0.58 - . g112.t1 4_related_000137F AUGUSTUS stop_codon 26820 26822 . - 0 transcript_id "g112.t1"; gene_id "g112"; 4_related_000137F AUGUSTUS CDS 26820 27511 0.63 - 2 transcript_id "g112.t1"; gene_id "g112"; 4_related_000137F AUGUSTUS CDS 27583 28564 0.62 - 0 transcript_id "g112.t1"; gene_id "g112"; 4_related_000137F AUGUSTUS start_codon 28562 28564 . - 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MLAVALGRPLGINDSDCDVEYPIDVDDDNLQEYFSGSLMTNNTTSLMTGIIALIKLYQIGGRVLRDVYAIENCKDNLE # PERKAELQRTVEVLDNELTQWCDDLPPVFKSQPTTDEQVSMGAVLCSHYYSVLTTLHRNMLPVKRDQPVAAKSTAKAVSSARSCIRLAPSMKNVVPPS # HHLAFFIQHLFSSAVILLLYAMHSTEPRAASAAMEEAKSTLSALESWEGQWPGARKCRELLLELTSTATEAITQAQADQQKQTSESGIPISVAPVMTS # PAMHERQRSLSGASPSSVAGRALKGVGRTRRTQSRESGTTSRRMAAVSPYRVDTRARSTSRRRGFDEEIERVGSSMGPYFHSLSSPTNGSSHSSPASV # NIPSPITNVPEGQESSPTLASAHTFNYGSPRLSAGQIPSPRYDSYDFGLSNNLNNYQGPAQPQWNGQQAGVDIYSAENLYGSSNGVYPSPLENYPVFE # TTGTHEMHNGMNRLSTTPPTSSFNASGLPFRGLEFIRNYSPGGYLAGDNFMGEPESLWQSYDPLSFNVNPDLPFTLGDPDVHGTGTN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 4_related_000137F AUGUSTUS gene 28898 29686 0.69 - . g113 4_related_000137F AUGUSTUS transcript 28898 29686 0.69 - . g113.t1 4_related_000137F AUGUSTUS stop_codon 28898 28900 . - 0 transcript_id "g113.t1"; gene_id "g113"; 4_related_000137F AUGUSTUS CDS 28898 29686 0.69 - 0 transcript_id "g113.t1"; gene_id "g113"; 4_related_000137F AUGUSTUS start_codon 29684 29686 . - 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MESIFSQIAPVLEQFGINGGDAVNTSSVNGTVSLPPEIAAPASEILRSIAPRDTQQSTSIPIKVEDDVSESLGQLALD # EYGHMRWIGGSSTMSLIQSFKALTTSPLHRISPMEEDPLAPYPSANKLYFPASVFFGKVRALPGPEEVEYPERDLADKLVCNMVLQRLSDDSIHLQVN # TYFSRFHFLMPVVDKPSFLKQYHNIMDNQQNHSLVQSETAFISLIFAVFACAANLVQDDRLSMSGRTDEGGMGMVYYERYVHTVCI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 4_related_000137F AUGUSTUS gene 33733 34563 0.95 + . g114 4_related_000137F AUGUSTUS transcript 33733 34563 0.95 + . g114.t1 4_related_000137F AUGUSTUS start_codon 33733 33735 . + 0 transcript_id "g114.t1"; gene_id "g114"; 4_related_000137F AUGUSTUS CDS 33733 34563 0.95 + 0 transcript_id "g114.t1"; gene_id "g114"; 4_related_000137F AUGUSTUS stop_codon 34561 34563 . + 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MCLVVRSTLDVYDKFTSKACGALLEFSCILSLTSCLFAFRSDPVIEPMLQSVPDPFDSYGPPQSEDQIFSILPPLSIM # PSAPSSTTTPLTRTPELENMEGPPSASSSTSWSQNPNTVLFPSESSAWADVPSSPSSSSPRSVSPTTPIRRHSLPASTGHSSRKAESKLRSVLSVIDE # ANSRHSTEEVISSHYVPQVENSNLNDTTLIQPQPQKQTSFSWTSPFSYGRSPYVEEDTNGDTTPRNSTFLSSPQTPTGRPVPELDADSSTIGETTVPV # PF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 4_related_000137F AUGUSTUS gene 36124 36756 0.94 - . g115 4_related_000137F AUGUSTUS transcript 36124 36756 0.94 - . g115.t1 4_related_000137F AUGUSTUS stop_codon 36124 36126 . - 0 transcript_id "g115.t1"; gene_id "g115"; 4_related_000137F AUGUSTUS CDS 36124 36756 0.94 - 0 transcript_id "g115.t1"; gene_id "g115"; 4_related_000137F AUGUSTUS start_codon 36754 36756 . - 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MLSDNLQKRSQVAHLVRNTLHDSGKVVLIRLHIGLMITPYLGFVEIETPVLLRSSPEGAREFLVPTRTKDVSDFPAFY # ALQQSPQQPKQLLIASGTVDKYFQIAKCFRDEDGRKDRQPEFTQIDMEMAYVSWGPMDSISTSSSGSQCSGTWRIGGSEVRDVVETIIKKIWKKIENV # DLPSCFPVMTYNEAMTRASTIKYEPPVVLLIGNS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 4_related_000137F AUGUSTUS gene 38191 38940 0.99 + . g116 4_related_000137F AUGUSTUS transcript 38191 38940 0.99 + . g116.t1 4_related_000137F AUGUSTUS start_codon 38191 38193 . + 0 transcript_id "g116.t1"; gene_id "g116"; 4_related_000137F AUGUSTUS CDS 38191 38940 0.99 + 0 transcript_id "g116.t1"; gene_id "g116"; 4_related_000137F AUGUSTUS stop_codon 38938 38940 . + 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MTELTSLRLFVDPTASWVLQDISLSRLVHFACPFNLDPHVSNFLKNTPALLELEVDSTPCGLGRPASALAPSSVTQLQ # HFVGSSLAAEVTIPSRPVQSVQLTTGDLTEEVATRLSESTAGIAILSATTSSAPATLLQLLSQRMQCLVHVQLLTTYSFPEAPDVVSCHFICFTTSFS # YHTSQTFYERIAGALNAFPDLQTFELSGMHWGSKELKDSDRHRVWQSQPLKSELDSSPEYLEIDPYSDLFFAY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # start gene g117 4_related_000137F AUGUSTUS gene 40047 41122 0.47 + . g117 4_related_000137F AUGUSTUS transcript 40047 41122 0.47 + . g117.t1 4_related_000137F AUGUSTUS start_codon 40047 40049 . + 0 transcript_id "g117.t1"; gene_id "g117"; 4_related_000137F AUGUSTUS CDS 40047 40169 0.47 + 0 transcript_id "g117.t1"; gene_id "g117"; 4_related_000137F AUGUSTUS CDS 40463 41122 1 + 0 transcript_id "g117.t1"; gene_id "g117"; 4_related_000137F AUGUSTUS stop_codon 41120 41122 . + 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MLEGLAPSVALTGGPWFTDGEFDTEFIETLMKACFKFIRDMLPAFGNSLWDSGAIDDNDSADEKRSKKKRKHHSSDNE # RDEERSSRRKNKKSRTVDDSELEDDSSSGKNAKRKKGLSSDDSDATSSKASRRKSKMKRMDSDVSDKESSDEKSTNKRRPKGKKSRYASDSSSDSDDS # RSHRSKPRSMKRSPSPFFSFDEAGSSVYRAIREERVSLGWSQAPCGGCPSFEFCKSGGPVNPGECVYYGDWLEGGTVAAIEDAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g117 ### # start gene g118 4_related_000137F AUGUSTUS gene 46129 47775 0.97 - . g118 4_related_000137F AUGUSTUS transcript 46129 47775 0.97 - . g118.t1 4_related_000137F AUGUSTUS stop_codon 46129 46131 . - 0 transcript_id "g118.t1"; gene_id "g118"; 4_related_000137F AUGUSTUS CDS 46129 47775 0.97 - 0 transcript_id "g118.t1"; gene_id "g118"; 4_related_000137F AUGUSTUS start_codon 47773 47775 . - 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MSDPVGQVRVCYTPLASAIVDTPEASLIACTGGKTSPFTQAIYKDFGDGKLHPPRLATATLQAIDSIQARNIFPQDLP # AYQRASVTARTNSVVSPFWRDWPLAEPCEFLTPEPLHHWHKMFWDHDAKWAIQAVGASHIDFRFSIHQPIVGYRSFKEGISSLKQVTGRAQRDVQRYL # IPLISGAVIPKFITALRALMDFRYAGQAPRFNQTSTLRVQTALNEFHENKDIIQDLKARVNPKGVPIVHWEIPKLEFMQSVAPSISASGPIMQWTADT # TEHAHITLVKDPARSGNNHDFEVQICRHLDRQSRVRRFDLVTAMVDAGVDFRLDDIEGDEGRGDIGHDREERDKEDEEVDAKISSSEELITRLNPVSQ # KLFGSFRPKQNFFLKARLLKQDASALLPLRIFTDNVSGEISAFKVNRDPDLKTLTIEQVSDLYSLPDFSGACLEFLERIQAKTQTFVIGGRRSLNQSI # SLPFTRVKVWSRIRIQTKTYFNTDILADSHTIFAAPPSPGWEFGRQNAAVVNINSSFEWPRSSLEGRLNTYFVVSVGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g118 ### # start gene g119 4_related_000137F AUGUSTUS gene 54014 55974 0.25 + . g119 4_related_000137F AUGUSTUS transcript 54014 55974 0.25 + . g119.t1 4_related_000137F AUGUSTUS start_codon 54014 54016 . + 0 transcript_id "g119.t1"; gene_id "g119"; 4_related_000137F AUGUSTUS CDS 54014 54221 0.46 + 0 transcript_id "g119.t1"; gene_id "g119"; 4_related_000137F AUGUSTUS CDS 54280 54660 0.6 + 2 transcript_id "g119.t1"; gene_id "g119"; 4_related_000137F AUGUSTUS CDS 55427 55974 0.97 + 2 transcript_id "g119.t1"; gene_id "g119"; 4_related_000137F AUGUSTUS stop_codon 55972 55974 . + 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MRMVSSKDLDVFASLRGKESSAVALKATTSSPPLEIQSSTSVSKAFVAPPRLIRRNRELENLKADASSFLASPRSAHS # KDSDNELLSGFPSAGSAPVASSSTKVSIGKGEPKSKTTVKVVEDSKADRPLPAGMAYKRIRLPPRSRKITSIASKGKARQIVVTDEGSTSNEVESEDE # AEDEDIAPPPKRLKTTSSISDLAISLRRAIDLNDQLKQLESLFDSTRDLFLRSVLDLQNAGEDPIVVLEALKAAEPNRRAISLNEWTLMATLFRWPSP # FNLSGLDFDNRTPGEWIDLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGASSQVGGSIPMELDLPAIESLAEPALSPEKGA # EPAHTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 4_related_000137F AUGUSTUS gene 57676 58453 0.32 + . g120 4_related_000137F AUGUSTUS transcript 57676 58453 0.32 + . g120.t1 4_related_000137F AUGUSTUS start_codon 57676 57678 . + 0 transcript_id "g120.t1"; gene_id "g120"; 4_related_000137F AUGUSTUS CDS 57676 57702 0.34 + 0 transcript_id "g120.t1"; gene_id "g120"; 4_related_000137F AUGUSTUS CDS 57809 57944 0.74 + 0 transcript_id "g120.t1"; gene_id "g120"; 4_related_000137F AUGUSTUS CDS 58026 58453 1 + 2 transcript_id "g120.t1"; gene_id "g120"; 4_related_000137F AUGUSTUS stop_codon 58451 58453 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MNSASEDELNRRSTPYPTTGSNKGSNKEEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPA # PLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERA # TTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 4_related_000137F AUGUSTUS gene 58714 59748 0.52 - . g121 4_related_000137F AUGUSTUS transcript 58714 59748 0.52 - . g121.t1 4_related_000137F AUGUSTUS stop_codon 58714 58716 . - 0 transcript_id "g121.t1"; gene_id "g121"; 4_related_000137F AUGUSTUS CDS 58714 59748 0.52 - 0 transcript_id "g121.t1"; gene_id "g121"; 4_related_000137F AUGUSTUS start_codon 59746 59748 . - 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIR # ISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQA # LSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRV # LPHFTREEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTNSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g121 ### # start gene g122 4_related_000137F AUGUSTUS gene 59964 61180 0.64 - . g122 4_related_000137F AUGUSTUS transcript 59964 61180 0.64 - . g122.t1 4_related_000137F AUGUSTUS stop_codon 59964 59966 . - 0 transcript_id "g122.t1"; gene_id "g122"; 4_related_000137F AUGUSTUS CDS 59964 60913 0.81 - 2 transcript_id "g122.t1"; gene_id "g122"; 4_related_000137F AUGUSTUS CDS 60958 61180 0.75 - 0 transcript_id "g122.t1"; gene_id "g122"; 4_related_000137F AUGUSTUS start_codon 61178 61180 . - 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDSVDT # SYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYH # FTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDNFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSY # EIRRNHMLESKDATCEVFVRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIEKYLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRNT # DQPDQPQLVVEKEKLCTC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g122 ### # start gene g123 4_related_000137F AUGUSTUS gene 61546 64490 0.86 - . g123 4_related_000137F AUGUSTUS transcript 61546 64490 0.86 - . g123.t1 4_related_000137F AUGUSTUS stop_codon 61546 61548 . - 0 transcript_id "g123.t1"; gene_id "g123"; 4_related_000137F AUGUSTUS CDS 61546 62984 0.98 - 2 transcript_id "g123.t1"; gene_id "g123"; 4_related_000137F AUGUSTUS CDS 63059 64490 0.87 - 0 transcript_id "g123.t1"; gene_id "g123"; 4_related_000137F AUGUSTUS start_codon 64488 64490 . - 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRSLKKPSVTIE # DVDEPDDEDTIKLIPSSRPTNQINNEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQADMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGEHDSK # GNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNEQFNLNPIKSFFLQNGRIKP # KPVRKKVQKRRFVEPILQNFSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKK # GKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHG # DPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERELMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIF # EDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQFLET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g123 ### # start gene g124 4_related_000137F AUGUSTUS gene 64520 65476 0.87 - . g124 4_related_000137F AUGUSTUS transcript 64520 65476 0.87 - . g124.t1 4_related_000137F AUGUSTUS stop_codon 64520 64522 . - 0 transcript_id "g124.t1"; gene_id "g124"; 4_related_000137F AUGUSTUS CDS 64520 65476 0.87 - 0 transcript_id "g124.t1"; gene_id "g124"; 4_related_000137F AUGUSTUS start_codon 65474 65476 . - 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKV # EDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTT # PRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQ # MNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g124 ### # start gene g125 4_related_000137F AUGUSTUS gene 66009 67959 0.66 + . g125 4_related_000137F AUGUSTUS transcript 66009 67959 0.66 + . g125.t1 4_related_000137F AUGUSTUS start_codon 66009 66011 . + 0 transcript_id "g125.t1"; gene_id "g125"; 4_related_000137F AUGUSTUS CDS 66009 67959 0.66 + 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MDRLLREGTPAYFLHISPMKEESPTEEMLRASDSSATEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKS # IPVQYQDYLDVFSPGEARTLPPHRPYDIKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTLRLCVDYRALN # KITKKNRYPLPLIGTLVDQLRKAKIFTKIDLRAGYNNVRVAQGHEWKTAFRTRYGSFEYLVMPFGLTNAPSAFQFFMNEIFHDMVDVCVVIYLDDILI # YSDDEASHVGHVRKVLERLRANHLHAKPEKCAFHVDTVEYLGVIISPLGVSMDPEKVKAVMDWPKPRTVKELQAFLGFANFYRRFIDNYSGITKVFTK # LLRKDSVWNWTPQCSSAFELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYDKELLAIVDCFKQ # WRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQARWAELLSGYDLSSTIAREVGSQAGRAHPQIRRVPKEGASRDQVLAGRERVLIPPERLNATILM # NEDLLVNRVREAPKDTTMIEALKRIARNEEESFVWEDGLIKRGGHIYVPDVGTLRREVLQSYHDHKLRGHPGEKRTKKLVNQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g125 ### # # ----- prediction on sequence number 4 (length = 54263, name = 4_related_000150F) ----- # # Predicted genes for sequence number 4 on both strands # start gene g126 4_related_000150F AUGUSTUS gene 177 1338 0.27 - . g126 4_related_000150F AUGUSTUS transcript 177 1338 0.27 - . g126.t1 4_related_000150F AUGUSTUS stop_codon 177 179 . - 0 transcript_id "g126.t1"; gene_id "g126"; 4_related_000150F AUGUSTUS CDS 177 827 0.99 - 0 transcript_id "g126.t1"; gene_id "g126"; 4_related_000150F AUGUSTUS CDS 922 1338 0.28 - 0 transcript_id "g126.t1"; gene_id "g126"; 4_related_000150F AUGUSTUS start_codon 1336 1338 . - 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MTTSRTQTTTTSSSTAGPSRSRPIPPPPIDLTAHEEDDVEDEEEDEDEIIRRAQARIERVRARKAATVAKKAAEEKAA # QAAAARERAAQEARERAIRARQQEEEVAERRRLLAEAATARSQRGTSPSEMSASPRRPVVEPMGGDPDDGNDGDDDDDDEEDRAPCERCKTKKLPCQM # QAGKRSSIICKPCHDAKVRCSYSGRPTTSKQREGGSGERIAVLESQMAQSLADSRALQEADSKTHQYLCQLLRRQEDDHARLIAMEMRMAMMGMGGGP # ATAGPSRGTTERRRPLKRWRITKESDEEEEEEKEVQQGMEEDGEGEVEEERGEMEVEEGGEGEAPAKTVTSDKGKEKELVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g126 ### # start gene g127 4_related_000150F AUGUSTUS gene 3156 3935 0.32 + . g127 4_related_000150F AUGUSTUS transcript 3156 3935 0.32 + . g127.t1 4_related_000150F AUGUSTUS start_codon 3156 3158 . + 0 transcript_id "g127.t1"; gene_id "g127"; 4_related_000150F AUGUSTUS CDS 3156 3411 0.65 + 0 transcript_id "g127.t1"; gene_id "g127"; 4_related_000150F AUGUSTUS CDS 3490 3935 0.52 + 2 transcript_id "g127.t1"; gene_id "g127"; 4_related_000150F AUGUSTUS stop_codon 3933 3935 . + 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MLLRTRAQSRANSEENTFFTTAQSFAPFSESISAIGQPRRCNHGFGPATIPTMSTLPETMEEDQQFEYSTLYTGDGQP # VQVLTPRPHRTGKQPQHRATSESPRDLPPHFDLDAGDHDDQDPLVEPNDPGANNDNPDNDNLNDGSGGLPCGEPGNPSGPGGPRGPRSPISPDIPNEQ # RAMLELLLGFKGSILAALGRLSDSSESKSKVKEPEVFDGSDPQKLKTLLVNLAPGLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g127 ### # start gene g128 4_related_000150F AUGUSTUS gene 8602 9120 0.65 + . g128 4_related_000150F AUGUSTUS transcript 8602 9120 0.65 + . g128.t1 4_related_000150F AUGUSTUS start_codon 8602 8604 . + 0 transcript_id "g128.t1"; gene_id "g128"; 4_related_000150F AUGUSTUS CDS 8602 9120 0.65 + 0 transcript_id "g128.t1"; gene_id "g128"; 4_related_000150F AUGUSTUS stop_codon 9118 9120 . + 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MQLDGLGALFDQARQSFLQSFLDLQQASQDPIVVLEALKAAEPQRESISVEDWTLLATLFQWSSPFNLNGLKFDNRTP # AKWIDLLRSIHSGATSATVTADGHLVDTSQPPEAAVEVSEALDPQGSPPITVVEKAAGVEDLASLSEGSPIQTELDLPQIESLTESTLAPEKGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g128 ### # start gene g129 4_related_000150F AUGUSTUS gene 10758 12212 0.25 + . g129 4_related_000150F AUGUSTUS transcript 10758 12212 0.25 + . g129.t1 4_related_000150F AUGUSTUS start_codon 10758 10760 . + 0 transcript_id "g129.t1"; gene_id "g129"; 4_related_000150F AUGUSTUS CDS 10758 10925 0.8 + 0 transcript_id "g129.t1"; gene_id "g129"; 4_related_000150F AUGUSTUS CDS 11568 11703 0.85 + 0 transcript_id "g129.t1"; gene_id "g129"; 4_related_000150F AUGUSTUS CDS 11785 12212 1 + 2 transcript_id "g129.t1"; gene_id "g129"; 4_related_000150F AUGUSTUS stop_codon 12210 12212 . + 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKDEKS # AVNEVSPRLSKVHCHTDSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRAHIAKVIADEACSILKS # RQDSGSDSCASDASFATAQSIPTTGSEDTVVTPTENAVPVPKTIERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g129 ### # start gene g130 4_related_000150F AUGUSTUS gene 15910 19473 0.99 - . g130 4_related_000150F AUGUSTUS transcript 15910 19473 0.99 - . g130.t1 4_related_000150F AUGUSTUS stop_codon 15910 15912 . - 0 transcript_id "g130.t1"; gene_id "g130"; 4_related_000150F AUGUSTUS CDS 15910 19473 0.99 - 0 transcript_id "g130.t1"; gene_id "g130"; 4_related_000150F AUGUSTUS start_codon 19471 19473 . - 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHPDSPQTSVPSAINPVAAKVAV # PLPEPSPSVSPTILETPPGDSLRPRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RAADRSSTTPTVLPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELN # YDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVN # PHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPADPSSVVGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFH # DHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFI # PTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEF # AYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTGK # FSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGT # DDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g130 ### # start gene g131 4_related_000150F AUGUSTUS gene 19806 21497 0.99 - . g131 4_related_000150F AUGUSTUS transcript 19806 21497 0.99 - . g131.t1 4_related_000150F AUGUSTUS stop_codon 19806 19808 . - 0 transcript_id "g131.t1"; gene_id "g131"; 4_related_000150F AUGUSTUS CDS 19806 21497 0.99 - 0 transcript_id "g131.t1"; gene_id "g131"; 4_related_000150F AUGUSTUS start_codon 21495 21497 . - 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEDQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPGGPGGPGGPGGPGGPGGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFN # DRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFS # GGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g131 ### # start gene g132 4_related_000150F AUGUSTUS gene 22406 26122 0.9 - . g132 4_related_000150F AUGUSTUS transcript 22406 26122 0.9 - . g132.t1 4_related_000150F AUGUSTUS stop_codon 22406 22408 . - 0 transcript_id "g132.t1"; gene_id "g132"; 4_related_000150F AUGUSTUS CDS 22406 26122 0.9 - 0 transcript_id "g132.t1"; gene_id "g132"; 4_related_000150F AUGUSTUS start_codon 26120 26122 . - 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFATRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDVILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEISYSHRAATNTESPIPELPN # PEPPTEPTQIEVPLEATLEESKSAVVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAINLIPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSSDLQEHRRV # VREVLIRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPAPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTRKDISFTWM # DTQQQAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGSALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRINTQADALSRMAAHQVLDNEDNRQQTVLKPNHFTKIAASILRNPLEDRIRKASQRE # AQVLEGLKMVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPADNDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCETCACK # KIQRHPRAVTQPLDVPLGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHALPCTSSITAEGVADIYYKEIFRLHGLPLHFKSDRGPQFAAKLMRS # LLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRNHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRI # LREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDFVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPISLDRIHPVFHIDKLYPWK # GNTINGEIPPPPEPVYLEDEDEPEYEVEEILDSRVRWKRLEYLVKWKGYNAGHNSWEPAPNLSRAPKIVPAFHKKHPTAAKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g132 ### # start gene g133 4_related_000150F AUGUSTUS gene 27043 27333 0.98 - . g133 4_related_000150F AUGUSTUS transcript 27043 27333 0.98 - . g133.t1 4_related_000150F AUGUSTUS stop_codon 27043 27045 . - 0 transcript_id "g133.t1"; gene_id "g133"; 4_related_000150F AUGUSTUS CDS 27043 27333 0.98 - 0 transcript_id "g133.t1"; gene_id "g133"; 4_related_000150F AUGUSTUS start_codon 27331 27333 . - 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MSTPIPPATPAPPASAEDLMTQLIKQVANLATAMEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKS # QAKLIKSALGFFTESAGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g133 ### # start gene g134 4_related_000150F AUGUSTUS gene 28168 29592 0.52 + . g134 4_related_000150F AUGUSTUS transcript 28168 29592 0.52 + . g134.t1 4_related_000150F AUGUSTUS start_codon 28168 28170 . + 0 transcript_id "g134.t1"; gene_id "g134"; 4_related_000150F AUGUSTUS CDS 28168 29592 0.52 + 0 transcript_id "g134.t1"; gene_id "g134"; 4_related_000150F AUGUSTUS stop_codon 29590 29592 . + 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MTVLAGSIDTTSSPALPDSETPVASIDCSALPHALDPRDQAHAHNNDDTWRDCQSQPCPNALSNSIREPLTVSNITFL # PIPQPRLPTPIMSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFF # TESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIRDRTEMSDIDLRERFFTALLPEIRQHL # IIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVKQNCPHKETT # CRYCGRRGHLESVCQDKFMGLSRDRGRRQQPRRQQISATAAPFTLFPNESVQIAASIPTPVAGPAIPSPANQDFSTQIGQIRELLDRANAMSPPSSGF # QQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g134 ### # start gene g135 4_related_000150F AUGUSTUS gene 29643 33350 0.98 + . g135 4_related_000150F AUGUSTUS transcript 29643 33350 0.98 + . g135.t1 4_related_000150F AUGUSTUS start_codon 29643 29645 . + 0 transcript_id "g135.t1"; gene_id "g135"; 4_related_000150F AUGUSTUS CDS 29643 33350 0.98 + 0 transcript_id "g135.t1"; gene_id "g135"; 4_related_000150F AUGUSTUS stop_codon 33348 33350 . + 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFMKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVAD # IISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVRE # VLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTTFNWTGTQ # QEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFNII # TDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNQQQTVLKPGHFTKIAASILRNPLEDRIRKASEREAQV # LEGLETVKKHGLQRLANGIAEWEEDNGLVYYRGRVYVPADNNLCTEVLRQCHDHPTAEHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEICARKKIQ # RHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLA # RLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILRE # ARQDAGAALHLGKKQQKEGYEHGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNP # INGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYNAGHNSWEPAPNLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g135 ### # start gene g136 4_related_000150F AUGUSTUS gene 33911 34891 0.65 + . g136 4_related_000150F AUGUSTUS transcript 33911 34891 0.65 + . g136.t1 4_related_000150F AUGUSTUS start_codon 33911 33913 . + 0 transcript_id "g136.t1"; gene_id "g136"; 4_related_000150F AUGUSTUS CDS 33911 34891 0.65 + 0 transcript_id "g136.t1"; gene_id "g136"; 4_related_000150F AUGUSTUS stop_codon 34889 34891 . + 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MRNALITDANTPEITTDELAIERLKAQWAIHIEALKIQYEAQLQDAETLREQRRQEEADAERLAAAEQQEKEKELAKE # AEKKCLPIYSFQKGVGVDSIPLQLHPYAKKMMTARKYVPLWYFLPDAAIEAKKRSKDSLDTNHLQFAIEDGDTLSGSTVSLVGSHTVRASPNAIPDSR # LSWPQVMRAKSAFLNALGLGTWPDNYIAMFGAFYINMDMHRELQEKDGDQVMAHYHAEMRLAWYDAMERKEPFDLSVISDRVIAESRREIIKQKQEKS # LKGKQPPRSKPRHNLTITTPPCFPHPTPTRIRQNQHRITLQPLPYNTTTATV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g136 ### # start gene g137 4_related_000150F AUGUSTUS gene 35016 36284 0.6 + . g137 4_related_000150F AUGUSTUS transcript 35016 36284 0.6 + . g137.t1 4_related_000150F AUGUSTUS start_codon 35016 35018 . + 0 transcript_id "g137.t1"; gene_id "g137"; 4_related_000150F AUGUSTUS CDS 35016 36284 0.6 + 0 transcript_id "g137.t1"; gene_id "g137"; 4_related_000150F AUGUSTUS stop_codon 36282 36284 . + 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MLLPMGIPATTLQCSLYLQTSKLLRHKWRPGLKPSSRNSPKQPRPPHFPVHANPQANLAKPPTLPLRLAKPANNQTTL # TFNVPFGTQINRRLHAVTDVSDVTSTTFDTALERPSGTGNVESPATGTSKDFSRSQMDPTLGWNFAPTGNVLTAAPVEPTQRSIAAQDVQAAATELAA # ALKESETRVNTPLQIEAWKLAISELNLTSKYPSLIESIQHGFNVGIPRIYHTFTPPNKLNDPESLAAFQSVMENEISMGRWLGPYPREAIEQVLGPFQ # TSPISMIPKSDKPGKYRLLENLSYPYHPTYIPSLHTTISSINSHIDSTLYPCLWGTFATTCRLIWTLPPGSQGAVRDISEAYRLIPLHPSQWPGAVIK # ISEDVYCVDTRDMFGLTSAGGTFGHLADGGVDICRGHGLGPLTKWVDDHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g137 ### # start gene g138 4_related_000150F AUGUSTUS gene 43839 44615 0.24 + . g138 4_related_000150F AUGUSTUS transcript 43839 44615 0.24 + . g138.t1 4_related_000150F AUGUSTUS start_codon 43839 43841 . + 0 transcript_id "g138.t1"; gene_id "g138"; 4_related_000150F AUGUSTUS CDS 43839 43865 0.33 + 0 transcript_id "g138.t1"; gene_id "g138"; 4_related_000150F AUGUSTUS CDS 43972 44107 0.77 + 0 transcript_id "g138.t1"; gene_id "g138"; 4_related_000150F AUGUSTUS CDS 44203 44615 0.6 + 2 transcript_id "g138.t1"; gene_id "g138"; 4_related_000150F AUGUSTUS stop_codon 44613 44615 . + 0 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [MNSASEDELNRRSTPYPTTGSNKGSNKEEKSAANDVSPRLSKVHCHADSHVSSNSYQSCLAQVVSSNLDTPPAPLESQ # STKFIAATLNFQAAEFEFNANLVKTYATRAHIAKVIADEACSILKSRQDSGSDSSVSDASFATAQSIPTTGSEDTVVTPTEMAVPVPKTVERATTPFT # RGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g138 ### # start gene g139 4_related_000150F AUGUSTUS gene 44948 45982 0.45 - . g139 4_related_000150F AUGUSTUS transcript 44948 45982 0.45 - . g139.t1 4_related_000150F AUGUSTUS stop_codon 44948 44950 . - 0 transcript_id "g139.t1"; gene_id "g139"; 4_related_000150F AUGUSTUS CDS 44948 45982 0.45 - 0 transcript_id "g139.t1"; gene_id "g139"; 4_related_000150F AUGUSTUS start_codon 45980 45982 . - 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MRLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDI # VESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWNFRPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIR # RTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPEND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g139 ### # start gene g140 4_related_000150F AUGUSTUS gene 46120 46620 0.8 - . g140 4_related_000150F AUGUSTUS transcript 46120 46620 0.8 - . g140.t1 4_related_000150F AUGUSTUS stop_codon 46120 46122 . - 0 transcript_id "g140.t1"; gene_id "g140"; 4_related_000150F AUGUSTUS CDS 46120 46620 0.8 - 0 transcript_id "g140.t1"; gene_id "g140"; 4_related_000150F AUGUSTUS start_codon 46618 46620 . - 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [MGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDE # EFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRNTDQPDQPQLVVEKKSVCTC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g140 ### # start gene g141 4_related_000150F AUGUSTUS gene 48172 49225 0.23 - . g141 4_related_000150F AUGUSTUS transcript 48172 49225 0.23 - . g141.t1 4_related_000150F AUGUSTUS stop_codon 48172 48174 . - 0 transcript_id "g141.t1"; gene_id "g141"; 4_related_000150F AUGUSTUS CDS 48172 48598 0.91 - 1 transcript_id "g141.t1"; gene_id "g141"; 4_related_000150F AUGUSTUS CDS 48654 48788 0.96 - 1 transcript_id "g141.t1"; gene_id "g141"; 4_related_000150F AUGUSTUS CDS 48881 49121 0.31 - 2 transcript_id "g141.t1"; gene_id "g141"; 4_related_000150F AUGUSTUS CDS 49195 49225 0.48 - 0 transcript_id "g141.t1"; gene_id "g141"; 4_related_000150F AUGUSTUS start_codon 49223 49225 . - 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [MIQGKFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQ # LNNGQFNLNPIKSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKTLKELGRECFEKVRYESRQRKKGKAQDSKDKKENVQADILNEPPTNKLE # ERIKLNQQDRSPINLIDETNKQVDSEAIGVEKPIKLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTEDIRRKER # DYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g141 ### # # ----- prediction on sequence number 5 (length = 49966, name = 4_related_000013F_2) ----- # # Predicted genes for sequence number 5 on both strands # start gene g142 4_related_000013F_2 AUGUSTUS gene 816 1808 0.74 + . g142 4_related_000013F_2 AUGUSTUS transcript 816 1808 0.74 + . g142.t1 4_related_000013F_2 AUGUSTUS start_codon 816 818 . + 0 transcript_id "g142.t1"; gene_id "g142"; 4_related_000013F_2 AUGUSTUS CDS 816 1808 0.74 + 0 transcript_id "g142.t1"; gene_id "g142"; 4_related_000013F_2 AUGUSTUS stop_codon 1806 1808 . + 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [MTLVLSRSGSLSSLSSLSTIATPTTTRTSPPPPHSSLPPGCTSSASASASNHTPRPLQEEKTEPYYADDSHKDPPPPA # HVLTSEFGVKIRDFAYEKGGVEVRRVKKYVRPEGQGIGRRREPVLVQRQPTPPGQRGWMWGGGVGGGVGGGYENAEASTSSGLTRQRVVQDIEDLEFH # SHSQSQSQSQSQSQPQSLPPFEHITFSESDGEPYIETPAVTPNGSLQWKTTTAEEELTLPSLHNLPSSKRAFHPDDDDEDDEQHHTTPPQPPTKKQRV # VSPIKRYNLRERRPPATTTLLPPSRLRNILSVESSQSQLSTGPKGRRKGKARTTRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g142 ### # start gene g143 4_related_000013F_2 AUGUSTUS gene 4510 4860 0.82 + . g143 4_related_000013F_2 AUGUSTUS transcript 4510 4860 0.82 + . g143.t1 4_related_000013F_2 AUGUSTUS start_codon 4510 4512 . + 0 transcript_id "g143.t1"; gene_id "g143"; 4_related_000013F_2 AUGUSTUS CDS 4510 4860 0.82 + 0 transcript_id "g143.t1"; gene_id "g143"; 4_related_000013F_2 AUGUSTUS stop_codon 4858 4860 . + 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPLSEEIGRRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g143 ### # start gene g144 4_related_000013F_2 AUGUSTUS gene 5726 9442 0.94 + . g144 4_related_000013F_2 AUGUSTUS transcript 5726 9442 0.94 + . g144.t1 4_related_000013F_2 AUGUSTUS start_codon 5726 5728 . + 0 transcript_id "g144.t1"; gene_id "g144"; 4_related_000013F_2 AUGUSTUS CDS 5726 9442 0.94 + 0 transcript_id "g144.t1"; gene_id "g144"; 4_related_000013F_2 AUGUSTUS stop_codon 9440 9442 . + 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASERE # AQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARK # KIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRS # LLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRI # LREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWK # GNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g144 ### # start gene g145 4_related_000013F_2 AUGUSTUS gene 11914 12678 1 - . g145 4_related_000013F_2 AUGUSTUS transcript 11914 12678 1 - . g145.t1 4_related_000013F_2 AUGUSTUS stop_codon 11914 11916 . - 0 transcript_id "g145.t1"; gene_id "g145"; 4_related_000013F_2 AUGUSTUS CDS 11914 12678 1 - 0 transcript_id "g145.t1"; gene_id "g145"; 4_related_000013F_2 AUGUSTUS start_codon 12676 12678 . - 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MEEAEKTEINRLGNPCKCKLAADIPPPSTPSQTPSGASSQPRSTVTPSRSPSQFDSHVTLAPSTHLSLFLSPSPPPTT # PRHKLQTVQDLSESPDLPDQSSLFICATSPTPLPKAKKAKTILAVTNKPMQVIDLTEPNSRHRSWPYKLYRGMHDGFTQLDENRRLKHDNVFPKTSAQ # TKSLQRAAWAYGTPELKERFYKDPHSTWRDYIQEVKNMNGGSLPKYQAGRKIKQEARGSLSRVKLEDFSPEIISLDSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g145 ### # start gene g146 4_related_000013F_2 AUGUSTUS gene 13421 13810 0.86 - . g146 4_related_000013F_2 AUGUSTUS transcript 13421 13810 0.86 - . g146.t1 4_related_000013F_2 AUGUSTUS stop_codon 13421 13423 . - 0 transcript_id "g146.t1"; gene_id "g146"; 4_related_000013F_2 AUGUSTUS CDS 13421 13810 0.86 - 0 transcript_id "g146.t1"; gene_id "g146"; 4_related_000013F_2 AUGUSTUS start_codon 13808 13810 . - 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MSIQQLLDQRTEARPFKPFPPLPARISIRPPSTDPQAKRHAALKSLFDFSEALSIEIPDQTLTEEEALSFSQQLDQAE # EDVIPSPTNISPGPYFFPVCWNCKLTLFVSDSAEIPSGALDESSISTLNGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g146 ### # start gene g147 4_related_000013F_2 AUGUSTUS gene 16804 17995 0.21 + . g147 4_related_000013F_2 AUGUSTUS transcript 16804 17995 0.21 + . g147.t1 4_related_000013F_2 AUGUSTUS start_codon 16804 16806 . + 0 transcript_id "g147.t1"; gene_id "g147"; 4_related_000013F_2 AUGUSTUS CDS 16804 16903 0.21 + 0 transcript_id "g147.t1"; gene_id "g147"; 4_related_000013F_2 AUGUSTUS CDS 16977 17995 1 + 2 transcript_id "g147.t1"; gene_id "g147"; 4_related_000013F_2 AUGUSTUS stop_codon 17993 17995 . + 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MSTLSETMEEDQQFKYSTLYTGDGQPVQVLTPRPIARHTGKQPQRRATSQSPRDPPPHFDLDAGDHDNQDPPVKPEDL # GADNNNPDNNNLDDDSGGLPCGEPGGPGGPHSPISPDIPNEQRAMLELLSDFKGSIETLGSVLAALGQPSDSSESKSKVKEPEVFDGSDPRKLKTFFV # NLALVFNDCPKYFTDQRKVNYTLSYLSGSAKEWFIPDILDPDLNSLLPWMSSFKALVKELQDNFGVYNAQGKAEDSLGNLKMKETKNIGKYNIRFNTL # AASTNWDSAALKWAYGRGLAERIKDKMACLPELATLADYHQEVLRIDNRYWKREETKKREEGRETSALHGLPRSQPHHQEGPLPSAVDLGPPRHSETS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g147 ### # start gene g148 4_related_000013F_2 AUGUSTUS gene 18920 20086 0.9 + . g148 4_related_000013F_2 AUGUSTUS transcript 18920 20086 0.9 + . g148.t1 4_related_000013F_2 AUGUSTUS start_codon 18920 18922 . + 0 transcript_id "g148.t1"; gene_id "g148"; 4_related_000013F_2 AUGUSTUS CDS 18920 20086 0.9 + 0 transcript_id "g148.t1"; gene_id "g148"; 4_related_000013F_2 AUGUSTUS stop_codon 20084 20086 . + 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MSTPIPPAPNTSTEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPYLLHFNAENPPFGGNWEAFLKEFSQWFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g148 ### # start gene g149 4_related_000013F_2 AUGUSTUS gene 20137 21795 0.94 + . g149 4_related_000013F_2 AUGUSTUS transcript 20137 21795 0.94 + . g149.t1 4_related_000013F_2 AUGUSTUS start_codon 20137 20139 . + 0 transcript_id "g149.t1"; gene_id "g149"; 4_related_000013F_2 AUGUSTUS CDS 20137 21795 0.94 + 0 transcript_id "g149.t1"; gene_id "g149"; 4_related_000013F_2 AUGUSTUS stop_codon 21793 21795 . + 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MFATSSYDSHPSCTILSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPQVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPTENPHIEVPLEATLEPSESAVVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANQDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGTFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g149 ### # start gene g150 4_related_000013F_2 AUGUSTUS gene 28471 28887 0.18 + . g150 4_related_000013F_2 AUGUSTUS transcript 28471 28887 0.18 + . g150.t1 4_related_000013F_2 AUGUSTUS start_codon 28471 28473 . + 0 transcript_id "g150.t1"; gene_id "g150"; 4_related_000013F_2 AUGUSTUS CDS 28471 28887 0.18 + 0 transcript_id "g150.t1"; gene_id "g150"; 4_related_000013F_2 AUGUSTUS stop_codon 28885 28887 . + 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MELHYTSGYHPEANGQTERVDQTLEQYIRIYCSYQQDDWSHILPVAEFTYNNAPNASTGITPFFANKGYHPNITVQPE # VDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPISSKVFVLAKHI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g150 ### # start gene g151 4_related_000013F_2 AUGUSTUS gene 29375 30820 0.28 - . g151 4_related_000013F_2 AUGUSTUS transcript 29375 30820 0.28 - . g151.t1 4_related_000013F_2 AUGUSTUS stop_codon 29375 29377 . - 0 transcript_id "g151.t1"; gene_id "g151"; 4_related_000013F_2 AUGUSTUS CDS 29375 30091 0.89 - 0 transcript_id "g151.t1"; gene_id "g151"; 4_related_000013F_2 AUGUSTUS CDS 30818 30820 0.28 - 0 transcript_id "g151.t1"; gene_id "g151"; 4_related_000013F_2 AUGUSTUS start_codon 30818 30820 . - 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MIRWLECPFDSFLSLSHKNKASSLLGADNDIPDNNDLDDDSGGLPRGEPSDLSGPGEPHGSCSPFSPDIPNKQRAMLE # LLSGFKGSIETLGSVLATLGQPSDSSESKSKVKEPEVFDSSDPRKLKTFFINLALVFNDHPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLP # AWTSSFKALVKELQDNFGVYDVQGEAADSLGNLKMKETKNIRKYNIQFNTLGWLLVPTGILLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g151 ### # start gene g152 4_related_000013F_2 AUGUSTUS gene 31680 32165 0.93 - . g152 4_related_000013F_2 AUGUSTUS transcript 31680 32165 0.93 - . g152.t1 4_related_000013F_2 AUGUSTUS stop_codon 31680 31682 . - 0 transcript_id "g152.t1"; gene_id "g152"; 4_related_000013F_2 AUGUSTUS CDS 31680 32165 0.93 - 0 transcript_id "g152.t1"; gene_id "g152"; 4_related_000013F_2 AUGUSTUS start_codon 32163 32165 . - 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [MPPRTQAQFRVNSEENTFFTTAQSFAPFSESISALGQLRHRNRGSGPATVPTMSIVPEAMEEEEQFEYSTLYTGDGQP # VQVLTPRCGQPPMVAPAQARSITRIDSPILQAIARRTGKQPQCLATSQSPRDPPPHFNLDTGDHNDQDPPVEPDDPVTCLNFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g152 ### # start gene g153 4_related_000013F_2 AUGUSTUS gene 33287 36171 0.71 + . g153 4_related_000013F_2 AUGUSTUS transcript 33287 36171 0.71 + . g153.t1 4_related_000013F_2 AUGUSTUS start_codon 33287 33289 . + 0 transcript_id "g153.t1"; gene_id "g153"; 4_related_000013F_2 AUGUSTUS CDS 33287 33440 0.8 + 0 transcript_id "g153.t1"; gene_id "g153"; 4_related_000013F_2 AUGUSTUS CDS 34202 36171 0.8 + 2 transcript_id "g153.t1"; gene_id "g153"; 4_related_000013F_2 AUGUSTUS stop_codon 36169 36171 . + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [MFGGILESWNQYGPNKDMKIQIKWYLTECRSFLAVPNVYCIKLIVLCDSIFXKPRTSKNSEKAGVLTPEEYRKAGVVF # GRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSISRGRLTYLPRNLKKSSLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIE # STRLIDTLTQTISQASNTIEPVKMTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTF # YKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVYQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPE # VRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDE # FKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRS # SNGTQWACFLCKSTDHFMNECPHLLEFTTRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNP # NVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g153 ### # start gene g154 4_related_000013F_2 AUGUSTUS gene 36201 38038 0.57 + . g154 4_related_000013F_2 AUGUSTUS transcript 36201 38038 0.57 + . g154.t1 4_related_000013F_2 AUGUSTUS start_codon 36201 36203 . + 0 transcript_id "g154.t1"; gene_id "g154"; 4_related_000013F_2 AUGUSTUS CDS 36201 37632 0.94 + 0 transcript_id "g154.t1"; gene_id "g154"; 4_related_000013F_2 AUGUSTUS CDS 37707 38038 0.59 + 2 transcript_id "g154.t1"; gene_id "g154"; 4_related_000013F_2 AUGUSTUS stop_codon 38036 38038 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVDEPDDEDTIKLIPSSRPTNQINNEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSIGENDSK # GNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNGQFNLNPIKSFFLQNGGSSL # NPYERKFRRGDLSNLYFKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g154 ### # start gene g155 4_related_000013F_2 AUGUSTUS gene 39864 41481 0.68 + . g155 4_related_000013F_2 AUGUSTUS transcript 39864 41481 0.68 + . g155.t1 4_related_000013F_2 AUGUSTUS start_codon 39864 39866 . + 0 transcript_id "g155.t1"; gene_id "g155"; 4_related_000013F_2 AUGUSTUS CDS 39864 40825 0.74 + 0 transcript_id "g155.t1"; gene_id "g155"; 4_related_000013F_2 AUGUSTUS CDS 41136 41481 0.87 + 1 transcript_id "g155.t1"; gene_id "g155"; 4_related_000013F_2 AUGUSTUS stop_codon 41479 41481 . + 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHV # KGATHGPDGLSRITPGGWQTKCPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNH # MLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRNTDQPDQP # QLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVECLVEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLK # MILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g155 ### # start gene g156 4_related_000013F_2 AUGUSTUS gene 41665 41970 0.46 + . g156 4_related_000013F_2 AUGUSTUS transcript 41665 41970 0.46 + . g156.t1 4_related_000013F_2 AUGUSTUS start_codon 41665 41667 . + 0 transcript_id "g156.t1"; gene_id "g156"; 4_related_000013F_2 AUGUSTUS CDS 41665 41970 0.46 + 0 transcript_id "g156.t1"; gene_id "g156"; 4_related_000013F_2 AUGUSTUS stop_codon 41968 41970 . + 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [MVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIF # DAIPHLRLSDTDSDEALSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g156 ### # start gene g157 4_related_000013F_2 AUGUSTUS gene 42231 42796 0.41 - . g157 4_related_000013F_2 AUGUSTUS transcript 42231 42796 0.41 - . g157.t1 4_related_000013F_2 AUGUSTUS stop_codon 42231 42233 . - 0 transcript_id "g157.t1"; gene_id "g157"; 4_related_000013F_2 AUGUSTUS CDS 42231 42443 0.5 - 0 transcript_id "g157.t1"; gene_id "g157"; 4_related_000013F_2 AUGUSTUS CDS 42503 42654 0.65 - 2 transcript_id "g157.t1"; gene_id "g157"; 4_related_000013F_2 AUGUSTUS CDS 42736 42796 0.79 - 0 transcript_id "g157.t1"; gene_id "g157"; 4_related_000013F_2 AUGUSTUS start_codon 42794 42796 . - 0 transcript_id "g157.t1"; gene_id "g157"; # protein sequence = [MFLLVSARFIATADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLHLEKSPR # FWLDSCSDASFATAQSIPTTGSEDTVVTPTEMAVPVPKTVERATTSIHSWCYSYDGRQRHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g157 ### # # ----- prediction on sequence number 6 (length = 68763, name = 4_related_000135F) ----- # # Predicted genes for sequence number 6 on both strands # start gene g158 4_related_000135F AUGUSTUS gene 1187 2653 1 - . g158 4_related_000135F AUGUSTUS transcript 1187 2653 1 - . g158.t1 4_related_000135F AUGUSTUS stop_codon 1187 1189 . - 0 transcript_id "g158.t1"; gene_id "g158"; 4_related_000135F AUGUSTUS CDS 1187 2653 1 - 0 transcript_id "g158.t1"; gene_id "g158"; 4_related_000135F AUGUSTUS start_codon 2651 2653 . - 0 transcript_id "g158.t1"; gene_id "g158"; # protein sequence = [MSLRTNPPCKADNRPTKPTAACAHRKHIFDKDDIKDRYHDPDGSKYRVCKDQPCPNRYDKITTGYIPSFARLIDRKQE # NLILGQGAPPEQVASSSSRKPQGTPEAASAPEPEYPVLPPPSPALDQPSSPISSLPRSSPPPPDPEDPDPGAEVSDPESDNDDNMCKVFKAFDKVSTL # KSDGSNWDTWKNQVELATQSIGFSDHLTSNPKDDTEAWEAKKDNDGNLLNAIVGCLSDQIYRQYKNYENVFDLWKNLLSDFDSKSALTEAHLQQQLHS # MRCHEPSKVNEHLDKLLEIRDSLEAWKITIPEEMFNNMIIASIPNIFKPTINTLVVVAARTSVLLTTRELVSMIRAEASGHTRGQSGKKESANYAGGN # INCGRGGFNRNRGNFRGQSRGRGNGNRGGGQSRQNSNNSTCYNCGGKGHFANKCSLPKRQQANEAQESSQKKEKNQPSGSGSNSWRSKNKEVGSSATI # EEIVGSRGSYQNYVTGNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g158 ### # start gene g159 4_related_000135F AUGUSTUS gene 11033 11578 0.99 + . g159 4_related_000135F AUGUSTUS transcript 11033 11578 0.99 + . g159.t1 4_related_000135F AUGUSTUS start_codon 11033 11035 . + 0 transcript_id "g159.t1"; gene_id "g159"; 4_related_000135F AUGUSTUS CDS 11033 11578 0.99 + 0 transcript_id "g159.t1"; gene_id "g159"; 4_related_000135F AUGUSTUS stop_codon 11576 11578 . + 0 transcript_id "g159.t1"; gene_id "g159"; # protein sequence = [MLFGYSRHPDDLYKNGIQRSSFVPAIELLKSRFDVTDLDSGTGELLLPFSDIRHPIHVYLDYRRVPRALSKVYYHPLT # PSNALEIEKIFKSMTHHDDKDPPVKNRQLTIWGRKLSIPESTSKVAKFRFDELCGKPLSAADYLEITKTFGTLFVLDVPKMGMDSKDKVCGMSADCFC # WADHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g159 ### # start gene g160 4_related_000135F AUGUSTUS gene 12254 12597 0.81 - . g160 4_related_000135F AUGUSTUS transcript 12254 12597 0.81 - . g160.t1 4_related_000135F AUGUSTUS stop_codon 12254 12256 . - 0 transcript_id "g160.t1"; gene_id "g160"; 4_related_000135F AUGUSTUS CDS 12254 12467 0.81 - 1 transcript_id "g160.t1"; gene_id "g160"; 4_related_000135F AUGUSTUS CDS 12545 12597 0.87 - 0 transcript_id "g160.t1"; gene_id "g160"; 4_related_000135F AUGUSTUS start_codon 12595 12597 . - 0 transcript_id "g160.t1"; gene_id "g160"; # protein sequence = [MEFTVFSQIDTISRSGRLTSGNQGLLGQASKQQLENDFGSSKDVDVVEIILKKGRDQPGDAISSQTFITNAARGSGVI # DSKGKGLSGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g160 ### # start gene g161 4_related_000135F AUGUSTUS gene 14589 14954 0.89 - . g161 4_related_000135F AUGUSTUS transcript 14589 14954 0.89 - . g161.t1 4_related_000135F AUGUSTUS stop_codon 14589 14591 . - 0 transcript_id "g161.t1"; gene_id "g161"; 4_related_000135F AUGUSTUS CDS 14589 14954 0.89 - 0 transcript_id "g161.t1"; gene_id "g161"; 4_related_000135F AUGUSTUS start_codon 14952 14954 . - 0 transcript_id "g161.t1"; gene_id "g161"; # protein sequence = [MVIPLQHAADERIRVERFLKELCLGFLRNSSGQEEEGVEMRHLTPPMPVLLTRHEASRLAHSKQIESSFHSWGIRFAD # LAQIELGIDTSSSGFDRDNDRYVQVFTVCVPEVVADKVWEQYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g161 ### # start gene g162 4_related_000135F AUGUSTUS gene 21002 21922 0.98 + . g162 4_related_000135F AUGUSTUS transcript 21002 21922 0.98 + . g162.t1 4_related_000135F AUGUSTUS start_codon 21002 21004 . + 0 transcript_id "g162.t1"; gene_id "g162"; 4_related_000135F AUGUSTUS CDS 21002 21922 0.98 + 0 transcript_id "g162.t1"; gene_id "g162"; 4_related_000135F AUGUSTUS stop_codon 21920 21922 . + 0 transcript_id "g162.t1"; gene_id "g162"; # protein sequence = [MLAGKDWSPSPPPEGTAANTPERPSSAQGLRKSRATSRAMAGSALRSSSGASSPASIRGTGSNAGTPDLSRSGTSDLK # TENENYFASLGQLNANRPLDLHPSQGGRYTGFGSTPAPSAGSSNASYGLSSRAAPSLQELQQNPLGALSKGWSLFSSAVVGASKTINETVIQPGMERV # TDPEFQGNVKGILGEAQKRAGQAASGANDWGRKQFGVDVGERVGTLVGGVGGNPRNQGYGHVGSGYGEEETSGLYHDDDAEYWGRHDGWGSATSDPNS # ASVLAGPPSATSDAPAKSQTKKTDWDDEWKDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g162 ### # start gene g163 4_related_000135F AUGUSTUS gene 22214 23170 0.65 - . g163 4_related_000135F AUGUSTUS transcript 22214 23170 0.65 - . g163.t1 4_related_000135F AUGUSTUS stop_codon 22214 22216 . - 0 transcript_id "g163.t1"; gene_id "g163"; 4_related_000135F AUGUSTUS CDS 22214 23170 0.65 - 0 transcript_id "g163.t1"; gene_id "g163"; 4_related_000135F AUGUSTUS start_codon 23168 23170 . - 0 transcript_id "g163.t1"; gene_id "g163"; # protein sequence = [MKSRRKGVTTSSMGPPASSSSSSNTNSTSSLPPSQSLEPPFTPTNPPTWGYPSWSQNENNSEMVYRPWNNPVNTEPST # WGTQQAFNYDYSSSQAPAMYSSPPSVPSMGHAPPIAIRSSFSHPHTNFTPTVPSIPSTTVPSSSSYSSIPLPRHTYTRTLVGPLSANATRLLDEHRKP # GVFFLFQDLSVRTEGTFRLRMRLMNVGKYPAPETGATGVMSIDDRDGHERGLPGVSPVLAQVYSEPFTVYSAKRFPGVPGVYCYFRNFLLTDHNFPTD # TTALSIAFGNQGQKLPLRNRHGNSSGKRRRRGDDDDEDDSEESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g163 ### # start gene g164 4_related_000135F AUGUSTUS gene 24273 27880 0.73 - . g164 4_related_000135F AUGUSTUS transcript 24273 27880 0.73 - . g164.t1 4_related_000135F AUGUSTUS stop_codon 24273 24275 . - 0 transcript_id "g164.t1"; gene_id "g164"; 4_related_000135F AUGUSTUS CDS 24273 27544 0.96 - 2 transcript_id "g164.t1"; gene_id "g164"; 4_related_000135F AUGUSTUS CDS 27610 27880 0.73 - 0 transcript_id "g164.t1"; gene_id "g164"; 4_related_000135F AUGUSTUS start_codon 27878 27880 . - 0 transcript_id "g164.t1"; gene_id "g164"; # protein sequence = [MLEPVATVIFNTVLSGRSHFGRSIPLHSVVRIVQSTSSRPFTSNFFNPQPRRVKGKARGTQSSNDEYEPAILSSQCRE # WSVQPGSFMSIPIIRNASSSRQRLNKRAGLSRILTLSLHRHLPSGRASERLAQTVLQTRHLSRIAEGSSSDDSFSSIAPPSTSNLDEAVAVEAEQTIQ # KFISALKPGPPLDPGEIWSMYVNIEKANALSRLTVQQLLVFTDKIFVYGDAHYNSSSVELSRLFTWGERVKTLLSYLASRIAPLSVYDYWSKCSMARA # AALMGQVDECLSHIHAAQKITLDYNQDVRIIWSYKTLVFYTFRYYDASQVLTMLAREWLSVGSYLLKSSGQWHIGTSQVVGASFRKAIHRLLSRIPRP # AVLISSNFTQWGPELSKRIGELLIDAYCHDQLPLHALETFNELKKLQVSIPLDTQLRLIRALVKEDTLGLAKDLFNTIPRGTTYKHYLQTALFLFAHC # GDHRRAESYYNSLHQQKFVNERDIGLLMHAYGTQGQAERVRIMFNDFFPVQEDGHRANEPGIQHFGVAIYACTIGGQIGEINYWLEEMVKAGHRPNII # IFNSIMQAFARSGDMASLRAVLDQVKNSDYPPTAVTYVLLMTTLAHRRDVAGVELLYKEAVEERGIVPNRRMVNTLMNAHVIAGSWKGVIRVFDYIRS # DAHPRIRLTIELYTTLLKAYVLIGAPFPVVSKIFSKLEDLNVKPDSYTFALLIQSACDAGEMEIAWEIFREMDKLAQSWTSNLYIDVYILTIIMAGYL # RAGKRQKAKAVYDELVARQIQPSAVTFSVMLTSYGNQRSEEAMRIAEAFINELMNIPERPWAKPSYGKPSALELVYGPLLKGYTTLHKAEDVERLHND # YSAAGGVETLGTLSALFDVYRRTYQIENVKEMWPAIFALGVEYVKETPVINTSKDDPSANRLLNNILCLPLSIYIDALSAAGEHEEIARVWKTFQEHG # FSFDAHNWNHLAVTLIRAGQLERAFQVVEHVILPYQDQARDLIASRNSTPNSPLMYSLEDLDKDEEEFNTTFIESQAQLKKRASWRLPSIRRNKRHAM # PQLEEDEEAHADDLAYPMHVLHQISPAWNVWKIHIAVKRVFLRAIEDLREGYLPRPVGPRRGQLPHSQDFMEDNQETRAEAKELFRQLYDQYPRTYSL # LQEFEIKERRRLGRSFGRKYEYGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g164 ### # start gene g165 4_related_000135F AUGUSTUS gene 29891 31143 0.45 - . g165 4_related_000135F AUGUSTUS transcript 29891 31143 0.45 - . g165.t1 4_related_000135F AUGUSTUS stop_codon 29891 29893 . - 0 transcript_id "g165.t1"; gene_id "g165"; 4_related_000135F AUGUSTUS CDS 29891 30135 0.91 - 2 transcript_id "g165.t1"; gene_id "g165"; 4_related_000135F AUGUSTUS CDS 30207 31143 0.45 - 0 transcript_id "g165.t1"; gene_id "g165"; 4_related_000135F AUGUSTUS start_codon 31141 31143 . - 0 transcript_id "g165.t1"; gene_id "g165"; # protein sequence = [MPDLSPSLLNFDDPHRFMPSDDQLLFDMEDVSFTHDASSGPFSWDLKNDTDSDIKPAYYTAGPSPLSSNYDYLSQASP # TDSFYDPSAYLTHEDSTSFDNNLFGSWIHEPELIPIPSPVAPIPISPNDPQNLEPFFTFGERSHFPQDHGLSPSEFAALQPLPMSPSSSYEESHAFPR # QRVDSMTSISPADISAVQTPEWVSLFDNTATPSSISIRTPASSRPSVRHSPISSDGVQRIRMPRRASITSSQLFQSASAPSHSHLQTQSRSASSMASR # RAESVSLSDDRDATVRRRRKVSNTSVEEHEKSDKPNDSVPTKSALRPPKLAPSAWQLYFTDWIQRQQASNTRKLNVAQAAKEAGQEYASLSAEEKEVS # LCFFSLYACDVGDADIVFSWE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g165 ### # start gene g166 4_related_000135F AUGUSTUS gene 33062 34815 0.49 + . g166 4_related_000135F AUGUSTUS transcript 33062 34815 0.49 + . g166.t1 4_related_000135F AUGUSTUS start_codon 33062 33064 . + 0 transcript_id "g166.t1"; gene_id "g166"; 4_related_000135F AUGUSTUS CDS 33062 33191 0.54 + 0 transcript_id "g166.t1"; gene_id "g166"; 4_related_000135F AUGUSTUS CDS 33308 34815 0.77 + 2 transcript_id "g166.t1"; gene_id "g166"; 4_related_000135F AUGUSTUS stop_codon 34813 34815 . + 0 transcript_id "g166.t1"; gene_id "g166"; # protein sequence = [MSSRTKSKPPAHSMGITAGAEDVKYQAKYKELKRKVKEIEGVSQRQCFVSFALTASPDIFFFLRILYERLAQISPSPV # PNDQHSISTPHPAAVVHHSPIIQPVPNRHRVDVGDLVGIDFDANFVDYSQHSRINPSRPLPAIDTTVAPSVHHHIPPPSSRHGSGSGSDSRQLPPFTQ # FLDQPRSPRSHPHSDSHQRTRSQSSSSRSHNLPPQQAPYHIGNAQGHQYADSLPPMQHALHSPPLLDREREGSRSRRHDLHELAGTHDAHAHSMPPLS # PSVDSRSSARIHNHQRLGPGTYINRDDPRSHEMDRERDWEQERDIRDRELNYSNARQRERDPVVSSMRSPPPVHRRAPSAMDYHDQHIPSSRAREEYY # HENSLGSGGPNGGGGGGIYARVSRSGTPGSGSGSNSAGANEGPSRPDSRSSYFEDRSRGYRFRHVNAGLPTNEEPTLDFVHEDGRSQSRDRSNATGVG # FPLQHRETVDAVGRMDLRRDRENKDAKRKIRGDMDVDTENGSTGVMSSYPGGISDERGGKRYHRDDNIEDVRMGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g166 ### # start gene g167 4_related_000135F AUGUSTUS gene 41745 42152 0.96 - . g167 4_related_000135F AUGUSTUS transcript 41745 42152 0.96 - . g167.t1 4_related_000135F AUGUSTUS stop_codon 41745 41747 . - 0 transcript_id "g167.t1"; gene_id "g167"; 4_related_000135F AUGUSTUS CDS 41745 42152 0.96 - 0 transcript_id "g167.t1"; gene_id "g167"; 4_related_000135F AUGUSTUS start_codon 42150 42152 . - 0 transcript_id "g167.t1"; gene_id "g167"; # protein sequence = [MCFLSSLLLILSLILTTTMLNEHTSAPSSPQQSLTEWVQSRFSGLYEHPSPDTSDTNTTQSRIQSMFTPTAQIYLNHT # GPVPLEEFTKNLEQTFGTNKTEVEWKECFEVPDSNKEEKDDNHEVVEGEVSLCLWDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g167 ### # start gene g168 4_related_000135F AUGUSTUS gene 44378 44767 0.65 + . g168 4_related_000135F AUGUSTUS transcript 44378 44767 0.65 + . g168.t1 4_related_000135F AUGUSTUS start_codon 44378 44380 . + 0 transcript_id "g168.t1"; gene_id "g168"; 4_related_000135F AUGUSTUS CDS 44378 44767 0.65 + 0 transcript_id "g168.t1"; gene_id "g168"; 4_related_000135F AUGUSTUS stop_codon 44765 44767 . + 0 transcript_id "g168.t1"; gene_id "g168"; # protein sequence = [MAFIVSLIATANILRILSTFFLVHAVPIGLGLGNSLSSRDDSYLDITQYLAAHNTIRAVHDAPLLIWSDDLAIGAQAW # ANACNFKHSDGVLSELPYGENMAAATGDFGINAAVESFMSDEGDFLYAPYQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g168 ### # start gene g169 4_related_000135F AUGUSTUS gene 56079 57605 0.49 + . g169 4_related_000135F AUGUSTUS transcript 56079 57605 0.49 + . g169.t1 4_related_000135F AUGUSTUS start_codon 56079 56081 . + 0 transcript_id "g169.t1"; gene_id "g169"; 4_related_000135F AUGUSTUS CDS 56079 57605 0.49 + 0 transcript_id "g169.t1"; gene_id "g169"; 4_related_000135F AUGUSTUS stop_codon 57603 57605 . + 0 transcript_id "g169.t1"; gene_id "g169"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQVLKPKVEDEFKD # LLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPKSSNG # TQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVN # LAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g169 ### # start gene g170 4_related_000135F AUGUSTUS gene 57635 60545 0.37 + . g170 4_related_000135F AUGUSTUS transcript 57635 60545 0.37 + . g170.t1 4_related_000135F AUGUSTUS start_codon 57635 57637 . + 0 transcript_id "g170.t1"; gene_id "g170"; 4_related_000135F AUGUSTUS CDS 57635 59066 0.97 + 0 transcript_id "g170.t1"; gene_id "g170"; 4_related_000135F AUGUSTUS CDS 59141 59381 0.37 + 2 transcript_id "g170.t1"; gene_id "g170"; 4_related_000135F AUGUSTUS CDS 59474 60545 0.99 + 1 transcript_id "g170.t1"; gene_id "g170"; 4_related_000135F AUGUSTUS stop_codon 60543 60545 . + 0 transcript_id "g170.t1"; gene_id "g170"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDPPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSQYNEPKNVTPDNEKSTGENDLK # GNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSLGENCDKSES # TETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPINKLEERIK # LNQQDRSPINLIDETNKQVDNEAIGVEKPIKLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFAPTGRYTEERKEIID # KNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVI # KKDGKSLRLVHSLEPLNKVTNPTLRRTSCNCRSSKILQWKILWRNLRFICWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g170 ### # start gene g171 4_related_000135F AUGUSTUS gene 61047 61265 0.61 + . g171 4_related_000135F AUGUSTUS transcript 61047 61265 0.61 + . g171.t1 4_related_000135F AUGUSTUS start_codon 61047 61049 . + 0 transcript_id "g171.t1"; gene_id "g171"; 4_related_000135F AUGUSTUS CDS 61047 61265 0.61 + 0 transcript_id "g171.t1"; gene_id "g171"; 4_related_000135F AUGUSTUS stop_codon 61263 61265 . + 0 transcript_id "g171.t1"; gene_id "g171"; # protein sequence = [MFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g171 ### # start gene g172 4_related_000135F AUGUSTUS gene 61675 61980 0.7 + . g172 4_related_000135F AUGUSTUS transcript 61675 61980 0.7 + . g172.t1 4_related_000135F AUGUSTUS start_codon 61675 61677 . + 0 transcript_id "g172.t1"; gene_id "g172"; 4_related_000135F AUGUSTUS CDS 61675 61980 0.7 + 0 transcript_id "g172.t1"; gene_id "g172"; 4_related_000135F AUGUSTUS stop_codon 61978 61980 . + 0 transcript_id "g172.t1"; gene_id "g172"; # protein sequence = [MGKRKSPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEF # VQNNPYPEAHRSSEGNRLDELIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g172 ### # # ----- prediction on sequence number 7 (length = 60989, name = 4_related_000140F) ----- # # Predicted genes for sequence number 7 on both strands # start gene g173 4_related_000140F AUGUSTUS gene 3285 4595 0.79 - . g173 4_related_000140F AUGUSTUS transcript 3285 4595 0.79 - . g173.t1 4_related_000140F AUGUSTUS stop_codon 3285 3287 . - 0 transcript_id "g173.t1"; gene_id "g173"; 4_related_000140F AUGUSTUS CDS 3285 4595 0.79 - 0 transcript_id "g173.t1"; gene_id "g173"; 4_related_000140F AUGUSTUS start_codon 4593 4595 . - 0 transcript_id "g173.t1"; gene_id "g173"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFATWNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDVILGLPWLRKVNPEIDWEKGRLSVKPPRVAIEEVPDEEISYSHRAAANTESPIPELPN # LEPPAEPPHIEVPLEATLEESESAVVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLIPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGPLQPHEGCSSLRLCSLVSPTPLQRFKHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g173 ### # start gene g174 4_related_000140F AUGUSTUS gene 4646 5722 0.99 - . g174 4_related_000140F AUGUSTUS transcript 4646 5722 0.99 - . g174.t1 4_related_000140F AUGUSTUS stop_codon 4646 4648 . - 0 transcript_id "g174.t1"; gene_id "g174"; 4_related_000140F AUGUSTUS CDS 4646 5722 0.99 - 0 transcript_id "g174.t1"; gene_id "g174"; 4_related_000140F AUGUSTUS start_codon 5720 5722 . - 0 transcript_id "g174.t1"; gene_id "g174"; # protein sequence = [MEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKSQAKLIKSALGFFTESAGDWATPHLLHFNAEHPP # FGGDWEEFLKEFVQRFESVDPGMEAHSEIKNLKQSKGQTVAEFAQKFKDIGDRTGMSDIDLRERFFTALLPEIRQNLIIVNIAQGLAPTLKEAIKRAI # SVDVYMHDPTMTGRNSGHTPTHAAHTTLADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVKQNCPHRETTCRYCGRRGHLEAVCQDKFMGL # GRDRGRRQQPRRQQISTTGPTPFSLFPNESVQIASSTPTSAPATVPATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g174 ### # start gene g175 4_related_000140F AUGUSTUS gene 10861 14529 0.16 - . g175 4_related_000140F AUGUSTUS transcript 10861 14529 0.16 - . g175.t1 4_related_000140F AUGUSTUS stop_codon 10861 10863 . - 0 transcript_id "g175.t1"; gene_id "g175"; 4_related_000140F AUGUSTUS CDS 10861 13479 0.48 - 0 transcript_id "g175.t1"; gene_id "g175"; 4_related_000140F AUGUSTUS CDS 14161 14529 0.16 - 0 transcript_id "g175.t1"; gene_id "g175"; 4_related_000140F AUGUSTUS start_codon 14527 14529 . - 0 transcript_id "g175.t1"; gene_id "g175"; # protein sequence = [MFPFGFGLSYSAFEYSALNCSEISSEGKFTVAFTIKNTSSVYGREVAQIYIADDEASLPRPQKELKGFKKVALQAGES # QSVETELDREALGFFNDRRGEWVAEKGVFSVLVGASSEDIKLKGSAPGEAEAELAFLNRIGVIDGILSDDVDNFLFGAHTVIRNHSSTHASAKSTIEK # AKVYTYSLPHPAFPDVDREDLIFIALCSGGDYGTGLDNCGIKISYGLARAGFGKKLCRAALNHNEKSDELRNFIRQWKSELAQELKTNASGFLPRKSP # KLASTIPNSFPDIKVLLAYLRPVTSESLGRSERYDDLLVNDGGCDGWLKKDPSLPLLAEKCEFYFEWGFLESIIKRFRTVIFHGITLRIMRRACILKP # TRGAKSIDLETICAHFAAGDHAIEDTESPTPEFIKDVSKTRTHESTSNTLEYRVAIDPTILVQLATRGVKGIRRPDDKDEWAEFEEELENDSSDNEGG # AKGRAKKKEYPDPTLSLKVWLPAVLVKEAVPGLIETYEEMRRQKEEKKAGKGRKVKVVEPKTKARPKPKPSASAATLTTKSSSSQLMLKTNQVDSSDD # DMDYDSRLFISGRPAHSTTHPRKDHMGWISQSTLPDLLSSDYPSPSTSSVSPPRKPKSAGSSSHTSYTHVKFSLKSSQQDKGKQKATTVSRGNSLLST # IDGIATPKKNKRSDIRQMSRFGSSSPEKTTPRPFPVSVENTFDEDSDDCGYNGPFNPNHIHSPAPPGPPQTPSPQKKTRKANAVHCSDSSVSEENTSP # REDKVDVLNKSPRKSKDHRYPKGFDYGDFPNGEQARKTIRDIPHPSRAARAASPTPMRRTPNKSTSTYAVTKAAVSARIPSSSPPPSPLSSSSTRPLP # PSAIAPTIVGPIIISDSEDEEQQPPKVIPIIAPQPKSRPRPKLKAATTSDIPKSHPDHRLGRSGAFQAGRTEFSDTEDDDIPPLLRARARVKVADQPQ # YKVKAKAKVRTTTTTMTTTRTKTVVDIIELSDDSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g175 ### # start gene g176 4_related_000140F AUGUSTUS gene 16926 17460 0.66 - . g176 4_related_000140F AUGUSTUS transcript 16926 17460 0.66 - . g176.t1 4_related_000140F AUGUSTUS stop_codon 16926 16928 . - 0 transcript_id "g176.t1"; gene_id "g176"; 4_related_000140F AUGUSTUS CDS 16926 17311 0.98 - 2 transcript_id "g176.t1"; gene_id "g176"; 4_related_000140F AUGUSTUS CDS 17451 17460 0.68 - 0 transcript_id "g176.t1"; gene_id "g176"; 4_related_000140F AUGUSTUS start_codon 17458 17460 . - 0 transcript_id "g176.t1"; gene_id "g176"; # protein sequence = [MSDVFNGVPSSCFPSSTGLGASFDVDLAYKVGIALGEECRAKGCHILLGPTVNTQRSPLGGRSFESFAEDPTLNGLIA # AAYINGVQSKGVSATIKHYVANDQEFERFSISSEHVFLNSTTDNNENLTVNLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g176 ### # start gene g177 4_related_000140F AUGUSTUS gene 18223 19873 0.23 + . g177 4_related_000140F AUGUSTUS transcript 18223 19873 0.23 + . g177.t1 4_related_000140F AUGUSTUS start_codon 18223 18225 . + 0 transcript_id "g177.t1"; gene_id "g177"; 4_related_000140F AUGUSTUS CDS 18223 18584 0.59 + 0 transcript_id "g177.t1"; gene_id "g177"; 4_related_000140F AUGUSTUS CDS 18691 18926 0.32 + 1 transcript_id "g177.t1"; gene_id "g177"; 4_related_000140F AUGUSTUS CDS 18984 19873 0.94 + 2 transcript_id "g177.t1"; gene_id "g177"; 4_related_000140F AUGUSTUS stop_codon 19871 19873 . + 0 transcript_id "g177.t1"; gene_id "g177"; # protein sequence = [MLKLTSPEALVKVLERTLYPTLDTLPAKPRSDIVEVLQKALKDTERVHELRTTIEYETRRKSLESQIKNLEKDAKRNW # KHGYEEQGEMMSEIATEVLEWLPDLWRIGVEEGIEIQAIQRCFAEFSDMDFELTIEDSDGQTIYKHRYQPVSDTVAWMWRELWISASASQSPFEAGIL # DDVESLNLKDSVLGLIRTGNLGQFEQEEGDEDDDEYQDAHWTPSMRAAASRVLDARHAARLVEFNTNLSTAVYNTLLQESPKIKPMLLDTLRKHVFGA # QTTNFSSNVYRSAAEIFAKDSPDDLPKLHDALPSWEKSSDIMQLFVKHFSTQESSTLREKGLQIIEQGFCDARSSVMSEIEDTFPGFDEAYDWLEERV # SEGKISKKEPQQRFGPEARKRDAFIDKFEDIAIRNRYGDSYSEEFGYWDDRDVGVDSDDSDYEEQMDIRQPDMSRPFLIWATALCEWPDKEEAQKLWE # RMNSSGDDDNLLFSVEGVADSLAGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g177 ### # start gene g178 4_related_000140F AUGUSTUS gene 22631 26075 0.12 + . g178 4_related_000140F AUGUSTUS transcript 22631 26075 0.12 + . g178.t1 4_related_000140F AUGUSTUS start_codon 22631 22633 . + 0 transcript_id "g178.t1"; gene_id "g178"; 4_related_000140F AUGUSTUS CDS 22631 22642 0.49 + 0 transcript_id "g178.t1"; gene_id "g178"; 4_related_000140F AUGUSTUS CDS 22817 22841 0.47 + 0 transcript_id "g178.t1"; gene_id "g178"; 4_related_000140F AUGUSTUS CDS 24106 26075 0.54 + 2 transcript_id "g178.t1"; gene_id "g178"; 4_related_000140F AUGUSTUS stop_codon 26073 26075 . + 0 transcript_id "g178.t1"; gene_id "g178"; # protein sequence = [MTIHSNRPIKLHGKPRTSRNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQITTEESRESSVL # RGTGSSISRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTNNTIEPVKMTTNNYGMPALSAEAK # AEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDLVKKPNWDQFKKDLKNMFPQSVGDERGS # RLLLEQLVHQFNPIDAGEQEKMRIFRLLFNAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGMLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKY # MIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEI # RAVKSLQLHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGD # SKRYKLRDNTRMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNG # KK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g178 ### # start gene g179 4_related_000140F AUGUSTUS gene 26105 28698 0.83 + . g179 4_related_000140F AUGUSTUS transcript 26105 28698 0.83 + . g179.t1 4_related_000140F AUGUSTUS start_codon 26105 26107 . + 0 transcript_id "g179.t1"; gene_id "g179"; 4_related_000140F AUGUSTUS CDS 26105 26878 0.89 + 0 transcript_id "g179.t1"; gene_id "g179"; 4_related_000140F AUGUSTUS CDS 26963 27536 0.94 + 0 transcript_id "g179.t1"; gene_id "g179"; 4_related_000140F AUGUSTUS CDS 27611 28698 0.98 + 2 transcript_id "g179.t1"; gene_id "g179"; 4_related_000140F AUGUSTUS stop_codon 28696 28698 . + 0 transcript_id "g179.t1"; gene_id "g179"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVDESDDEDAIKLIPSSRPTNQINDEHRPYDHVQPRMYRPIQINTPTQVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQADMFEVLTESRNDIPVGSISVAYEDHSDHPVVVAN # QSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPF # DVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDLKGNFHSSMNGYKRCEQETFSKKELSEAYV # LASREHLKSQDDQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDNQLNNDQFNLNPIKSFFLQNGRIKPKPVQKKVQKRRFVEPILQNFSLGENCDK # FESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENIQADVVNEPPTNKLEE # RIKLNQQDRSPINLIDETNKQVDNEAIGVEEPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTKERKE # IIDKNHPEGFLWKQERDLMHEMMCKQEAGFAWDQVKPEPLKMNSFHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g179 ### # start gene g180 4_related_000140F AUGUSTUS gene 29046 31918 0.75 + . g180 4_related_000140F AUGUSTUS transcript 29046 31918 0.75 + . g180.t1 4_related_000140F AUGUSTUS start_codon 29046 29048 . + 0 transcript_id "g180.t1"; gene_id "g180"; 4_related_000140F AUGUSTUS CDS 29046 31248 0.75 + 0 transcript_id "g180.t1"; gene_id "g180"; 4_related_000140F AUGUSTUS CDS 31335 31918 1 + 2 transcript_id "g180.t1"; gene_id "g180"; 4_related_000140F AUGUSTUS stop_codon 31916 31918 . + 0 transcript_id "g180.t1"; gene_id "g180"; # protein sequence = [MTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRF # VWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSN # VPFEWNKKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYSLKLALEASYYHV # YGCRCLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGEMEEP # YQFDDFKDQIDPRSGYLYETAQEADDVELDVQEALDEERSYEIRRNHMLESKNATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGK # YLSNPSDESLGEMSKDEWIKFIRLIKKFQVYDQGRLYHRNTDQPDQPQLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRS # CKECQNRQMKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNM # LAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGLESTWLVNPPNRILTRDELIGYRAQALSKH # NSFIEKVRCRVNANKVAELRRFERKYRHTIKDWGFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHF # TRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSKGEHQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g180 ### # start gene g181 4_related_000140F AUGUSTUS gene 32179 33632 0.07 - . g181 4_related_000140F AUGUSTUS transcript 32179 33632 0.07 - . g181.t1 4_related_000140F AUGUSTUS stop_codon 32179 32181 . - 0 transcript_id "g181.t1"; gene_id "g181"; 4_related_000140F AUGUSTUS CDS 32179 32812 0.68 - 1 transcript_id "g181.t1"; gene_id "g181"; 4_related_000140F AUGUSTUS CDS 32928 32956 0.37 - 0 transcript_id "g181.t1"; gene_id "g181"; 4_related_000140F AUGUSTUS CDS 33032 33199 0.42 - 0 transcript_id "g181.t1"; gene_id "g181"; 4_related_000140F AUGUSTUS CDS 33465 33632 0.89 - 0 transcript_id "g181.t1"; gene_id "g181"; 4_related_000140F AUGUSTUS start_codon 33630 33632 . - 0 transcript_id "g181.t1"; gene_id "g181"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLSFQNTLVRNRLLDRARSVHSDH # EASTRSDNSRFIRKSKKKATRFASSRDVKREPRSMNSASEDELVTPYPTIGSNKGSNKDEKSVVNEVSPRLSKVHCHTDSHVSSNCMSCLAEDKGESI # QFKSVSNGFLFHDLVTHSKHINHALAQVVSSNLDTPPAPLELQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSS # ASDASFATAQSVPTTGSEDTVVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g181 ### # start gene g182 4_related_000140F AUGUSTUS gene 35857 36588 0.3 - . g182 4_related_000140F AUGUSTUS transcript 35857 36588 0.3 - . g182.t1 4_related_000140F AUGUSTUS stop_codon 35857 35859 . - 0 transcript_id "g182.t1"; gene_id "g182"; 4_related_000140F AUGUSTUS CDS 35857 36588 0.3 - 0 transcript_id "g182.t1"; gene_id "g182"; 4_related_000140F AUGUSTUS start_codon 36586 36588 . - 0 transcript_id "g182.t1"; gene_id "g182"; # protein sequence = [MCMVSSKDLDVFASLRGKVSPAVASKISTPSPSLEIKPPTSVPKAPVAPPRLIRRNRELESLKADASTFCEYQFSSLI # SYFIHLIFVFDSVSSPRSIRSRDSDNELLSGFPSVSSAPVASSSTKISVGKKEPKSKTTVKVVEDLEADHPPPAGMAYKRVRLPPRSRKNTSIALKGK # ARQVVVTEEDSTSNEVESEDEDEDEDTAPPPKRLKTTSSISGNILFFIFRLILFIQFECSFTTSSFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g182 ### # start gene g183 4_related_000140F AUGUSTUS gene 46760 47517 0.57 + . g183 4_related_000140F AUGUSTUS transcript 46760 47517 0.57 + . g183.t1 4_related_000140F AUGUSTUS start_codon 46760 46762 . + 0 transcript_id "g183.t1"; gene_id "g183"; 4_related_000140F AUGUSTUS CDS 46760 46928 0.92 + 0 transcript_id "g183.t1"; gene_id "g183"; 4_related_000140F AUGUSTUS CDS 47010 47160 0.83 + 2 transcript_id "g183.t1"; gene_id "g183"; 4_related_000140F AUGUSTUS CDS 47220 47517 0.61 + 1 transcript_id "g183.t1"; gene_id "g183"; 4_related_000140F AUGUSTUS stop_codon 47515 47517 . + 0 transcript_id "g183.t1"; gene_id "g183"; # protein sequence = [MFCIHDSFHVVESSQHSLSHYWFQQGSNKEEKSAVNDVPPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTP # PAPLSRKVPNSLLLHSTFRQLNSNLTQTCILKSRQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKDTS # LPRSAIHLIDIHLINTSSFRCIRLKPIIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g183 ### # command line: # augustus --species=saccharomyces split/input_2/input_2.fa_chunk_0000008