# This output was generated with AUGUSTUS (version 3.4.0). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /opt/augustus-3.4.0/config/ ... # saccharomyces version. Using default transition matrix. # Looks like split/input_1/input_1.fa_chunk_0000014 is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 5311644, name = Scaffold_1) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 Scaffold_1 AUGUSTUS gene 8859 10002 0.78 - . g1 Scaffold_1 AUGUSTUS transcript 8859 10002 0.78 - . g1.t1 Scaffold_1 AUGUSTUS stop_codon 8859 8861 . - 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_1 AUGUSTUS CDS 8859 9886 0.79 - 2 transcript_id "g1.t1"; gene_id "g1"; Scaffold_1 AUGUSTUS CDS 9996 10002 0.78 - 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_1 AUGUSTUS start_codon 10000 10002 . - 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MINGIGATSLEGSESDRSPLGLYSLLLDQTGIPSPASPSFGMYEEYKCPWTPRSLDSSSNDDGNARYITKSMTTAPHL # SYPSPKSSHWPHQIPLHPPSHPPLLSPHISTELPMQSEFPHPVSPSIRYIELNGPVYDGEAPGSQSPSIRTFELPELEEDEDLETGFDSGLGLSLTSF # PTMSEISPAPEDSSSRFSSLSQYILQNSPSLITCSPPTSGPISKPTLESDWDTPTSNLSPANFNDAGYDSATPSSMLLLDVNIESSQNIKFNPGRLPS # PNTLVESLDSRLSHLPLDSSPSDISSYADCPEYAVLRAQPDLYQDLLRLLACTGKHRHLRRRRKLRKESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 Scaffold_1 AUGUSTUS gene 12522 13220 0.98 - . g2 Scaffold_1 AUGUSTUS transcript 12522 13220 0.98 - . g2.t1 Scaffold_1 AUGUSTUS stop_codon 12522 12524 . - 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_1 AUGUSTUS CDS 12522 13220 0.98 - 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_1 AUGUSTUS start_codon 13218 13220 . - 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MRSHRTLVPLVTIALTLAANAVPTSYYHDSGNSAGAYSTSVIGVASPTLSARGSGKPLSPIPEQDERPAPEPKASAAV # VIKSKFTKSPGPPPDHPAPKLVDLRIPGDPPPHRPLPPIPKPKEHSQPPAPPPVPARNPNRPTPKSHERVPSSDPAVPNFSRPLTHSPSTSFNGLTPD # KKNEPGAKTNETAVGEKNSSTGEKVAIAGALMAAAATGYVIAKETETVSLPTLVFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 Scaffold_1 AUGUSTUS gene 13547 14600 0.33 - . g3 Scaffold_1 AUGUSTUS transcript 13547 14600 0.33 - . g3.t1 Scaffold_1 AUGUSTUS stop_codon 13547 13549 . - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_1 AUGUSTUS CDS 13547 13756 0.97 - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_1 AUGUSTUS CDS 13806 14600 0.33 - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_1 AUGUSTUS start_codon 14598 14600 . - 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MRTYSTLIPFVTLAVALAANAAPPTYSSSEGSYTHTALIRDAMSPDGFVEARGFADDDRYLFERSPPSSSDAPPPPPS # GVQDTSPGGATSPAAVPGSLFSGPSPYAPPTKPLPPIPQGSPQYRREAAPEHHNLPAPEGGEKKEPLTQQKVEEPHHTGQAPHPVDEKKNPEHSPPPP # VPTKKPGFMNKLKGFTNKATTSAKDPNKQAALKNKGKKLAKYGGFAAAGMGAGALITGLGLMHAGSKESSPTGSTGSEGTASSTVSPLRGTGNIDATS # GGGTSSSSSDTSSGSAAAGSDTTASDTTASDTSSSDGTTPAKRTVSRSMYRRRVSGWDLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 Scaffold_1 AUGUSTUS gene 21790 23006 0.36 - . g4 Scaffold_1 AUGUSTUS transcript 21790 23006 0.36 - . g4.t1 Scaffold_1 AUGUSTUS stop_codon 21790 21792 . - 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_1 AUGUSTUS CDS 21790 22507 0.9 - 1 transcript_id "g4.t1"; gene_id "g4"; Scaffold_1 AUGUSTUS CDS 22582 23006 0.36 - 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_1 AUGUSTUS start_codon 23004 23006 . - 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MMSVATRAAMLARRPGLRTLVITRSTFAGAGAHVGKWLGDNFSSWQEYRLSIAGMLGMAGVYQIPMVGSDICGYAENT # TSTLCARWAMLGGFYPFMRNVSGFVTSFGNELILYSLIGSSIMPTRLLVKNSIGGLLLRKRRRMYRLMDYFYTTFHQASLDGSPVLQALWYKYPKDTS # TYPIDLQFLFGPSILVSPVTDENSTSVTIYLPRDTFYEFLTLEPVSGTGANVTLTNVDFTEIPVHIVGGSILPLRVNGTMTTTELRQNDFEIVVAPSA # AGNASGRLYVDDGVSLEQTNGTTALTFDYQDGALSVNGTFGYNLGVNVASVKILGVNQSPKNVSVVDQSGQSIGNGTFSYDAGTKVVEVALGVAFDKA # FELHLQEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 Scaffold_1 AUGUSTUS gene 26535 26831 0.74 + . g5 Scaffold_1 AUGUSTUS transcript 26535 26831 0.74 + . g5.t1 Scaffold_1 AUGUSTUS start_codon 26535 26537 . + 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_1 AUGUSTUS CDS 26535 26831 0.74 + 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_1 AUGUSTUS stop_codon 26829 26831 . + 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MTAKRLSRFFPWISPSSFKATGHESSVESAPPLRALAAVVDATPSAKTWKDLPNFDDLPMFKNMKGCAWEVWGKDDQL # GTINLLTDEVVKKAAAEEIM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 Scaffold_1 AUGUSTUS gene 28993 30111 0.4 - . g6 Scaffold_1 AUGUSTUS transcript 28993 30111 0.4 - . g6.t1 Scaffold_1 AUGUSTUS stop_codon 28993 28995 . - 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_1 AUGUSTUS CDS 28993 30111 0.4 - 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_1 AUGUSTUS start_codon 30109 30111 . - 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MLAYKHWHELELTIYCTCGLITQYFLFYEPNRAPMGQYWRIMNIDNEESTGGLGKLGEFFWYSSQIISYLKTPPVIPS # SFHTSSGIFEENHRNASKYDYYINISLLMLSQICREDPTSIILSLPNELLLAIAEELLEEYLDLICFSLTCSCIWDVTEQVRYRSLYSRLKTSSWAGG # RIILLGDYAGALPKGLLTDAEKKQFELHGHDDDDLGALLYYYADEKFERPPANISLLTDKRIQANRILRKELLAYSHREPFSPWIWLWGDFTPIRSPQ # DRWIVRNLTKQEYVIKTRSRNLTQILYCLIGCSDDPSVSMRGGELLIHGAWAGDRIDITLVSFHKQEHEDESGWTNITAGVKKTLEELAAREMREFEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 Scaffold_1 AUGUSTUS gene 33562 34664 0.29 - . g7 Scaffold_1 AUGUSTUS transcript 33562 34664 0.29 - . g7.t1 Scaffold_1 AUGUSTUS stop_codon 33562 33564 . - 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_1 AUGUSTUS CDS 33562 34360 0.41 - 1 transcript_id "g7.t1"; gene_id "g7"; Scaffold_1 AUGUSTUS CDS 34474 34664 0.3 - 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_1 AUGUSTUS start_codon 34662 34664 . - 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MPRRRSPSSAALTVGVSTTLLFVTSLAVAGRNSKTIIRCESELDDELASSDKKDLSKGFQRPRCSLKKSIITLAITSS # RNPESEDSIAVYFPSTDDEDDRRSYMALFDGHNGPAMSDFLCDHLVEYVASAISKLPQQYELSGYLEMHNSDESNSSAIPADDVISDTIKHAFKEVDD # AMIDVSDVLSSTSKTNAIRTLRHAHSGSCALMSIYDTDTQILRVALTGDSRAVLGRKVLSKDGKTNGYQVHVLSQDQNAHNPKEIVRLETEHPGEEVV # KNGRVMGWGMARAFGDAAYKWSVDIQEKLYEKYLGDRVRSNMKTPPYLTGAWISL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 Scaffold_1 AUGUSTUS gene 41860 43149 0.68 - . g8 Scaffold_1 AUGUSTUS transcript 41860 43149 0.68 - . g8.t1 Scaffold_1 AUGUSTUS stop_codon 41860 41862 . - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_1 AUGUSTUS CDS 41860 42402 0.7 - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_1 AUGUSTUS CDS 42461 42678 0.71 - 2 transcript_id "g8.t1"; gene_id "g8"; Scaffold_1 AUGUSTUS CDS 42729 43149 0.99 - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_1 AUGUSTUS start_codon 43147 43149 . - 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MKVKRLSASRLPLLSRVSSPPPITVPIDRSTNSASNSTRRKPIRRQSGLLVRQGSPVAGSHEAAEDDELAAVLDEAEE # EVPVVKKEKRKIIREKGKEKEKDHETSLRKKLRDEMGNEGKKFKLADVTNSPRSQPSQSVDAVLSEVELDVARTSNNRREFLSSSPPRSSSGSHFSSN # NYLPIPQQSSSPPQIPATHDNQDLDSELAQIGGRERRNLFTNMSDFCPHSKMRKPDSEPGGSSLRKRKSASAVMSSRSEECVPGHEVDADGDYEDPDG # GARSSLEGPNAKPSRARSRATDPAQLILPASRPGSSADVASQPLASATSSTSIPSRRAKSRSYLYTAEDVPSPESDDADTEYIPSSGVARGGPSWVNT # SERKKAGSGYLLRMTRRGDIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 Scaffold_1 AUGUSTUS gene 48864 49691 0.87 - . g9 Scaffold_1 AUGUSTUS transcript 48864 49691 0.87 - . g9.t1 Scaffold_1 AUGUSTUS stop_codon 48864 48866 . - 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_1 AUGUSTUS CDS 48864 49691 0.87 - 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_1 AUGUSTUS start_codon 49689 49691 . - 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MEDVHNYKGESRYNHGRLVQYDFGGDPEIEQWLTANLNRVNLGTVGLVFLDAQTGLIQNVSESDLSDVHQTLDLWTGI # MSSEFTYEDTTIYVTTTSAQDISAITVTVSSPLLYPNTSNALTRLGIFLDFPWGDRSQMFSAPFVGNFSSALFDNHTTTLLDHSEIQAQIQHQMVDAI # FYTAVESSTKFDITRDSPIAHRYTILPHSDTNSLSPVISYNSTLPSSLPSSDSLVQSSIAAWESYWMKSGFVDLFSGSTDSRADESQRMIILFEVFNE # S] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 Scaffold_1 AUGUSTUS gene 52424 53599 1 - . g10 Scaffold_1 AUGUSTUS transcript 52424 53599 1 - . g10.t1 Scaffold_1 AUGUSTUS stop_codon 52424 52426 . - 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_1 AUGUSTUS CDS 52424 53599 1 - 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_1 AUGUSTUS start_codon 53597 53599 . - 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MQNLPLDLQGTYEQAVQKCKNGPNSTEAYHILLWLLYAFEPLDQKQITAILSIDLEQQVVESSDEIAFKIENIVDSTL # VAINSDGVVQLAHASVKEFLLLKQVAIQMKASFDMDAHLAHDTLAQMCIVYLLQWKDEEVLEQDFPFESYAIQHWAGHTASSLQGDQLGNVLRDLSHE # ILKASSFQYHHWTDKYKLQTFPYTTKKGMNPFWWAACLGLLPAVNDITLLDKNFLNQPTGDLGTPLSAAAYFERENSVHFLLHIGADVNAQGGEFGNA # LQAAACCGNINIVKCLFESGANVNAQGGLFGNALQAASWNDHRDVVQYLLKNGADANVQGGQYGSALVAAAYEGNEIIVKWLVAHGADVNIQVEFFLG # MLSKLLHMKAMKPLSNIFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 Scaffold_1 AUGUSTUS gene 53721 54665 0.66 - . g11 Scaffold_1 AUGUSTUS transcript 53721 54665 0.66 - . g11.t1 Scaffold_1 AUGUSTUS stop_codon 53721 53723 . - 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_1 AUGUSTUS CDS 53721 54377 0.74 - 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_1 AUGUSTUS CDS 54654 54665 0.66 - 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_1 AUGUSTUS start_codon 54663 54665 . - 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MRIVLDQAKQSYCNHPNSKVRLFEVVLTGTSHFSSTLIESLQTDPQKLVCYHYFDTRDTTGVKSSYQGLLSSILQQLG # SSNSRIHPALKVLHQSSKTGLMYAKPSNKSMENAIKTIINDLQSEGPVCVILDALDECNESSSLQKFCTNLVSDMHHLWLVVTSRHLPDIHWGSRILI # SLDIENTSGDIDVYLATKIAEDFQDFKSEPFKLEVKKTLKTKAEGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g11 ### # start gene g12 Scaffold_1 AUGUSTUS gene 69715 70203 0.98 - . g12 Scaffold_1 AUGUSTUS transcript 69715 70203 0.98 - . g12.t1 Scaffold_1 AUGUSTUS stop_codon 69715 69717 . - 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_1 AUGUSTUS CDS 69715 70203 0.98 - 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_1 AUGUSTUS start_codon 70201 70203 . - 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MIDSGATGLFLHQKFVNKHHIYVQSLPRPIELYNIDGTANLAGRITHSARLLARVDQNQPQILEFLVTNIGSEDVILG # LPWLRKVNPDINWRDGQIQIPAKPKVQHHVAIEEIPECKEPNVGGNTEQILEPNRPESSGLPHAVPRTEPGLETTETGTSSEMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 Scaffold_1 AUGUSTUS gene 70378 71462 0.95 - . g13 Scaffold_1 AUGUSTUS transcript 70378 71462 0.95 - . g13.t1 Scaffold_1 AUGUSTUS stop_codon 70378 70380 . - 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_1 AUGUSTUS CDS 70378 71161 0.97 - 1 transcript_id "g13.t1"; gene_id "g13"; Scaffold_1 AUGUSTUS CDS 71281 71462 0.97 - 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_1 AUGUSTUS start_codon 71460 71462 . - 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MSSAQDVRDTITELTKNQAKLQDVVSELVSGLSTTKSVGKPQNYNGKRGEDARRFLAAFELSSITGSGVPFPYDTWEE # FVTAFKTRFETTDASADAKQLLKRLYQNRTTVGTYASTFQQYADRTGYSDKDLRDRFYDHLADRVKDGLVFTTCPTGSLQELIEAAIDVDNRQITRAW # EQGKKLVDDGILTNFRPTTVATPFTAPTRDPNAMDIDATTTRSPDAFRRFMIGRCYGCGSKEHRKADGHHERDICRHCGLNGHVEAVCRRKFLGLPGR # KATTISATSIPDTTQSAATPDLAALLKELAANQQVLAGQIAELHKNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 Scaffold_1 AUGUSTUS gene 84108 84872 0.24 + . g14 Scaffold_1 AUGUSTUS transcript 84108 84872 0.24 + . g14.t1 Scaffold_1 AUGUSTUS start_codon 84108 84110 . + 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_1 AUGUSTUS CDS 84108 84156 0.24 + 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_1 AUGUSTUS CDS 84226 84872 1 + 2 transcript_id "g14.t1"; gene_id "g14"; Scaffold_1 AUGUSTUS stop_codon 84870 84872 . + 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MSSRYDFHWKSWSKFFAGSSDLWVPSSSCTSSTCSAKSTYDSSASSTSSKESGSFSIEYGDGSTVSGPVYEDTVTVAG # IQVSKQKFSPVTTLSSSFASDPVDGILGLAFPAISNLDADPFFVNANSQNAVDLNEFGFYLASSGSELYLGGANSDLYSGSIEYHDVDTSTGFWQISG # ASIASDGTTAVSNFATIIDSGTTIMYGPPSAVKEFYAQVSGSKLYDSTDGLLIPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 Scaffold_1 AUGUSTUS gene 88573 89313 0.81 + . g15 Scaffold_1 AUGUSTUS transcript 88573 89313 0.81 + . g15.t1 Scaffold_1 AUGUSTUS start_codon 88573 88575 . + 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_1 AUGUSTUS CDS 88573 89313 0.81 + 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_1 AUGUSTUS stop_codon 89311 89313 . + 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MFSPDGSLLAHATGKSCVYGKFRVVFLSVDPFFTIQKFSPWKSADNRYIASAAMSITDHSYDLSLNVVVFRVTTETMS # PIFFRGIKVATVPEQTTMKFMVFSTDNKQLHTVTDYLDFGQEMDTWYIETGEPIKPSPQHTLPPSNLQSTKKAIFEHATGWLLNDNHFGASSAYCFIP # YYAWNIRNIMLQLPCATAVHESSVIALVFDTNPIIVQFPKVWEVSYGFVIIMNQLMPSKRRKTYGAEAIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 Scaffold_1 AUGUSTUS gene 98788 100155 0.51 + . g16 Scaffold_1 AUGUSTUS transcript 98788 100155 0.51 + . g16.t1 Scaffold_1 AUGUSTUS start_codon 98788 98790 . + 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_1 AUGUSTUS CDS 98788 99075 0.51 + 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_1 AUGUSTUS CDS 99211 100155 0.97 + 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_1 AUGUSTUS stop_codon 100153 100155 . + 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MALSTAEKLRIRSTRHAKFINELRELYVTESGLAAPSFRWDRSRDADYRCLAQAVYALSKWGPERNTALKTTGTLSQV # EKWLDDDTSPMSGEFADQVSPMEIIGVVILIYVHSIIAPPFEKLTLSELSAAVAQMRQDVRREHKDIRLNDRVGKTVVTYVKAYRKPAPLPMTVPQAS # RILSIGELTGHHQPKAVDTSIPAQAQIKSTSPKRKREPSLSDQHGAKRLTTKLSAPTLAPLPTSGVVPSNDYRARFSSFLSAPVPYPTPPAATSHLPH # PSQYGAPPPYLIGTSGYQHPTKTAPQPFVHSYPSYYGHVPPPPLPPPQSQPPVPTPFRSEPSPSLSTSSSEPRDELRLVYPPIAVKAEPSPSPSPATM # PLDALRHLQELNKMFDRRPPSAHQGGPWQSYQPYSDSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 Scaffold_1 AUGUSTUS gene 129238 129668 0.43 - . g17 Scaffold_1 AUGUSTUS transcript 129238 129668 0.43 - . g17.t1 Scaffold_1 AUGUSTUS stop_codon 129238 129240 . - 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_1 AUGUSTUS CDS 129238 129353 0.48 - 2 transcript_id "g17.t1"; gene_id "g17"; Scaffold_1 AUGUSTUS CDS 129425 129668 0.5 - 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_1 AUGUSTUS start_codon 129666 129668 . - 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MFLTTSWSFTLFFSLMLSSNAYSIPIQRQQSRSTLIHPSAKHSVHLFHGTFESSLANSILKVGFDVNKAGKPEGGDFH # RSPVHAGYMTDSIYAAAQFVCHAPDQDDGSMQTSAYVVGKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g17 ### # start gene g18 Scaffold_1 AUGUSTUS gene 133259 134425 0.91 + . g18 Scaffold_1 AUGUSTUS transcript 133259 134425 0.91 + . g18.t1 Scaffold_1 AUGUSTUS start_codon 133259 133261 . + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_1 AUGUSTUS CDS 133259 134425 0.91 + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_1 AUGUSTUS stop_codon 134423 134425 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 Scaffold_1 AUGUSTUS gene 134476 135549 0.55 + . g19 Scaffold_1 AUGUSTUS transcript 134476 135549 0.55 + . g19.t1 Scaffold_1 AUGUSTUS start_codon 134476 134478 . + 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_1 AUGUSTUS CDS 134476 135549 0.55 + 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_1 AUGUSTUS stop_codon 135547 135549 . + 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMCTKIYPMSLTSRRSWIVSRRKPMERLYRPLKSPISSPVFFVRRRMGNSVSYKTTGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 Scaffold_1 AUGUSTUS gene 139361 140752 0.95 + . g20 Scaffold_1 AUGUSTUS transcript 139361 140752 0.95 + . g20.t1 Scaffold_1 AUGUSTUS start_codon 139361 139363 . + 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_1 AUGUSTUS CDS 139361 140752 0.95 + 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_1 AUGUSTUS stop_codon 140750 140752 . + 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGVVRMDPV # KVAAVRDWPVPTNLRELRGFLGFANFYRCFIRNFARIARPLNDLTKKDTSFNWTGTQQEAFDTLREAFISAPILALWAPDRTRIEVDASGFATGGALM # QQQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQAPFELTYGYLPLFNIPVGQRSGI # PAVDDRIRILREARQDAGAALHLGKKQQKEGYKRGKRKAHQFKVGDLVWLGAEDINLQLSSEKIGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVF # HVDKLYPWKGNPINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAPNLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 Scaffold_1 AUGUSTUS gene 146099 146530 0.6 - . g21 Scaffold_1 AUGUSTUS transcript 146099 146530 0.6 - . g21.t1 Scaffold_1 AUGUSTUS stop_codon 146099 146101 . - 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_1 AUGUSTUS CDS 146099 146530 0.6 - 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_1 AUGUSTUS start_codon 146528 146530 . - 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MDTSESQVGTGSAADASSYMVEPNAHLTRGLKTLLVTFLPHSAYPPYGKMTEATEREQEQINEQLKMFFTSPAVVNKL # GNVELTFVEGQKSWVCTTVFHYVQWKISNTDGLTRNGALWLLKDYSQWESGQININSELLHIKNE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 Scaffold_1 AUGUSTUS gene 148783 149130 0.46 - . g22 Scaffold_1 AUGUSTUS transcript 148783 149130 0.46 - . g22.t1 Scaffold_1 AUGUSTUS stop_codon 148783 148785 . - 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_1 AUGUSTUS CDS 148783 149130 0.46 - 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_1 AUGUSTUS start_codon 149128 149130 . - 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MEVVKAALGVVQATVGGNPLIGDDTLLGDDDGQILFDITGDPNSKECIHGVMWAHESKIRSFKIARRYSLPIQYLAPD # VKVSYPLFTSAVLIISAQPFEMFRTWPMPENMPQSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 Scaffold_1 AUGUSTUS gene 150135 151046 0.28 - . g23 Scaffold_1 AUGUSTUS transcript 150135 151046 0.28 - . g23.t1 Scaffold_1 AUGUSTUS stop_codon 150135 150137 . - 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_1 AUGUSTUS CDS 150135 151046 0.28 - 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_1 AUGUSTUS start_codon 151044 151046 . - 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MYFSPPSRVVQTTNNFVIAMLYLIFTFALVPSILAAAVPSPATLDLVSIFRSVYRLCSFGVMKHIQQRRISLRSTDPV # NDFRRAKLDPRGGAQSSVQTYEMIQMSDVSATETAKLMQRAVAIIHFPNPTRPSKKYYSKKAQKRAIEGTSKLLEAAMTELGIKLPDSELRKAMLVYG # FIGKPDPTMAQYDFKVEFLMSVGKGEDNKGEWMDCKGRVGYIYHEGEMKVTGSILNPEGKRIVRLRKGKIFHKVMSFYLIFLSQRWVRTLSTTFFVFQ # SLPQDLGTESHNPAEMGGKVTGVHWADNP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g23 ### # start gene g24 Scaffold_1 AUGUSTUS gene 156039 157475 0.37 + . g24 Scaffold_1 AUGUSTUS transcript 156039 157475 0.37 + . g24.t1 Scaffold_1 AUGUSTUS start_codon 156039 156041 . + 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_1 AUGUSTUS CDS 156039 156137 0.85 + 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_1 AUGUSTUS CDS 156199 156329 0.66 + 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_1 AUGUSTUS CDS 157313 157475 0.37 + 1 transcript_id "g24.t1"; gene_id "g24"; Scaffold_1 AUGUSTUS stop_codon 157473 157475 . + 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MLHKTNVLLDTSLNTQLESALKNKLQHGPATQEVEILSWMGRTALELIGQAGLGYSFDPLTDEDSAHPYSQISKELFT # RRDTMIPLLKPIIGLDGTEIHEVAAPNDTRVIVSIYNSNRNPDLWGEGKGLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 Scaffold_1 AUGUSTUS gene 158614 159186 0.86 - . g25 Scaffold_1 AUGUSTUS transcript 158614 159186 0.86 - . g25.t1 Scaffold_1 AUGUSTUS stop_codon 158614 158616 . - 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_1 AUGUSTUS CDS 158614 159186 0.86 - 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_1 AUGUSTUS start_codon 159184 159186 . - 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MTKTDIMNAIKAQKIDIVFQYPEKNRPPIVSLSLQANVQKGSLLLVKAAMEALGIDIKPSFSINYSGFVSKPRSIEDR # FKVWFLKKEDGGGGMDKLIEFTGFLKMRLKDKNVEKKEVGEKEVKEADKLVFYGKVIDSKGEPIVTLNHKGKIVPKVCLTLFFSLAYIGFSFHNTDHT # VVLSSPVETPWPIE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 Scaffold_1 AUGUSTUS gene 161724 162074 0.5 + . g26 Scaffold_1 AUGUSTUS transcript 161724 162074 0.5 + . g26.t1 Scaffold_1 AUGUSTUS start_codon 161724 161726 . + 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_1 AUGUSTUS CDS 161724 162074 0.5 + 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_1 AUGUSTUS stop_codon 162072 162074 . + 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLLSMRKIPLSEEIGRRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g26 ### # start gene g27 Scaffold_1 AUGUSTUS gene 162940 164370 0.91 + . g27 Scaffold_1 AUGUSTUS transcript 162940 164370 0.91 + . g27.t1 Scaffold_1 AUGUSTUS start_codon 162940 162942 . + 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_1 AUGUSTUS CDS 162940 164370 0.91 + 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_1 AUGUSTUS stop_codon 164368 164370 . + 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETRSELPEL # EPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFSE # SASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLV # ADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMV # REVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g27 ### # start gene g28 Scaffold_1 AUGUSTUS gene 172504 172851 0.73 - . g28 Scaffold_1 AUGUSTUS transcript 172504 172851 0.73 - . g28.t1 Scaffold_1 AUGUSTUS stop_codon 172504 172506 . - 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_1 AUGUSTUS CDS 172504 172851 0.73 - 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_1 AUGUSTUS start_codon 172849 172851 . - 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MQNQTSLTNPDVHRGPTGTNRHLFGLNPKGYFMNFGMWTPFGRWFSKYPDRQFIFENADFDGDYEQRFPSDAMYEELG # PNARVWKTYLAETNSLDENMIGEARDGLDSMLVFVCG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 Scaffold_1 AUGUSTUS gene 174834 175524 0.99 - . g29 Scaffold_1 AUGUSTUS transcript 174834 175524 0.99 - . g29.t1 Scaffold_1 AUGUSTUS stop_codon 174834 174836 . - 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_1 AUGUSTUS CDS 174834 174979 0.99 - 2 transcript_id "g29.t1"; gene_id "g29"; Scaffold_1 AUGUSTUS CDS 175054 175333 1 - 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_1 AUGUSTUS CDS 175402 175524 1 - 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_1 AUGUSTUS start_codon 175522 175524 . - 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MSSIHLYPTVGGLDPILNNTYKDSKARSNTLYVHQLPLRVLAEYCDDGADQDRILTDSDRTSINLDEAPVVADKQSLS # TTENVEETVVEVEEDRMIEVGKIGWALFKSSMITFGKGPEQKADRYFQKESWVFGEGPDGKEYKWVLGFYTPEVSKTNRVVFESISHEMIIIDSSSST # TGPTPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g29 ### # start gene g30 Scaffold_1 AUGUSTUS gene 181982 182890 0.82 - . g30 Scaffold_1 AUGUSTUS transcript 181982 182890 0.82 - . g30.t1 Scaffold_1 AUGUSTUS stop_codon 181982 181984 . - 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_1 AUGUSTUS CDS 181982 182890 0.82 - 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_1 AUGUSTUS start_codon 182888 182890 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MRGGKQWSIDHEADEPPPLALISQTPYSFVATLGELWVPQTYKQAMKWSDLWFAPMKREYDTLLEKDCWELVPLPTDV # NLTGSRWTYAIKFDAKGNLLKCKARYVAQGYTQIQGQDYDKTYGRVARMESVRLVLAIIAVLCLSIFQVDFTAAFLNSPITHDVYLKQPNGFVKPGSE # HLVCKLKKSIYGTMQGSHNWQETLTADYAEDGFIASRADPCIHYQRTGQEYTITSTYGDDVCGGLTTKTGRDRAVADLGKQWEANEVTTEVLLGMTIT # QDPDTKVITITQKTYFQRMLSNFGLQNA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 Scaffold_1 AUGUSTUS gene 195676 196935 0.6 - . g31 Scaffold_1 AUGUSTUS transcript 195676 196935 0.6 - . g31.t1 Scaffold_1 AUGUSTUS stop_codon 195676 195678 . - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_1 AUGUSTUS CDS 195676 196935 0.6 - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_1 AUGUSTUS start_codon 196933 196935 . - 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFRNNPRLVRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 Scaffold_1 AUGUSTUS gene 196986 197978 0.54 - . g32 Scaffold_1 AUGUSTUS transcript 196986 197978 0.54 - . g32.t1 Scaffold_1 AUGUSTUS stop_codon 196986 196988 . - 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_1 AUGUSTUS CDS 196986 197978 0.54 - 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_1 AUGUSTUS start_codon 197976 197978 . - 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSE # IKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTP # ADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVKQNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPN # ESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 Scaffold_1 AUGUSTUS gene 199711 200250 0.91 - . g33 Scaffold_1 AUGUSTUS transcript 199711 200250 0.91 - . g33.t1 Scaffold_1 AUGUSTUS stop_codon 199711 199713 . - 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_1 AUGUSTUS CDS 199711 200250 0.91 - 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_1 AUGUSTUS start_codon 200248 200250 . - 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MHDNIRDPRNKVTKDNEQIDIAISYMQGPKVSSWVQNYTDDNFNDDKEEWRVTWKGFKDALNASFLDEGLTENAQEKL # EHLHQGPNERAEDFFKEFEVIMRDAGYAKDAPYVIRLIEMNVKPKLIDQVYGTSNEQIKKFDELKQKIISINNMWWRCREMRRNWSSRYQRDAGQGPS # NQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 Scaffold_1 AUGUSTUS gene 206434 206904 0.76 - . g34 Scaffold_1 AUGUSTUS transcript 206434 206904 0.76 - . g34.t1 Scaffold_1 AUGUSTUS stop_codon 206434 206436 . - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_1 AUGUSTUS CDS 206434 206904 0.76 - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_1 AUGUSTUS start_codon 206902 206904 . - 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MLSLLTPMPWILMPPTPVMGILGKHSWPACRDDVLAVVLKVMSSKTAHTEKLPAAIVDVEDIWKQSAKTSSWDSDETE # ADASNLDANRYPLRDPRHSPYSQMNPSRSVLDPNICCTVPATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 Scaffold_1 AUGUSTUS gene 207163 207600 0.97 - . g35 Scaffold_1 AUGUSTUS transcript 207163 207600 0.97 - . g35.t1 Scaffold_1 AUGUSTUS stop_codon 207163 207165 . - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_1 AUGUSTUS CDS 207163 207600 0.97 - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_1 AUGUSTUS start_codon 207598 207600 . - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MSTPIPPATPAPPAPPASAEDLMTLLIKQVANLATAMEERSSSKSSMNKPEVFKGKDSNEARCFRAQFQNWASEQPDL # SNSQAKLIKSALGFFTEGAGDWATPHLLNFNAENPPFEGDWQKFLTEFSQRFELIDPGMEARNDPIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g35 ### # start gene g36 Scaffold_1 AUGUSTUS gene 209442 209807 0.63 - . g36 Scaffold_1 AUGUSTUS transcript 209442 209807 0.63 - . g36.t1 Scaffold_1 AUGUSTUS stop_codon 209442 209444 . - 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_1 AUGUSTUS CDS 209442 209807 0.63 - 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_1 AUGUSTUS start_codon 209805 209807 . - 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MLPGDFKPTSTSSSKDLWMVRNLTKQEYAIPTRPQSLTQIVYSLIGCSDDPSVSMQGERCSVLIDGPWAGDRIDITLV # SMHRQEHAPEEESNWKDVTISVKELLEALAAEDDDYSVGDFKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 Scaffold_1 AUGUSTUS gene 213618 214801 0.8 - . g37 Scaffold_1 AUGUSTUS transcript 213618 214801 0.8 - . g37.t1 Scaffold_1 AUGUSTUS stop_codon 213618 213620 . - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_1 AUGUSTUS CDS 213618 214154 0.8 - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_1 AUGUSTUS CDS 214211 214801 0.83 - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_1 AUGUSTUS start_codon 214799 214801 . - 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MENANELCFFLNSARFRVWIENPVQQHRAPPPAALMSVVLLWGVHLSQDSTLRQLEEDLFARVLRETAGISSAHRPDN # FLYNLQTEFLLARYLFSTGKIIEGRYHVSCALSIGVGSGINKIRSNQPPPPRYAAISLLPPVSDMIEEGERIRCCWSGFMLDKSWAAALQTSSDMLCP # AEIPGAQTDTPWPQDEEVYEQGGNFLPEGYSFTTLNFIRGTPTSDLGDSIEARLAKAVFCWERACNLTKDTWTLCKPSRSICPLAQPLKAASEEYIEY # LISYDQRRQCIARFISTLSYTEDIEGLIPSKALKRLKAHSMAHAANIEILRILPSFEQNEDSQPQARSMVSSAEEIMKLLASPLLHTLQYIDSVMGVR # FVP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 Scaffold_1 AUGUSTUS gene 217616 217975 0.95 - . g38 Scaffold_1 AUGUSTUS transcript 217616 217975 0.95 - . g38.t1 Scaffold_1 AUGUSTUS stop_codon 217616 217618 . - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_1 AUGUSTUS CDS 217616 217975 0.95 - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_1 AUGUSTUS start_codon 217973 217975 . - 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MSATLLEPLKSLIDIISTQTAVLQSAYSKNNTEAPSLNTTFQPSLLEIDPIVLAARHLIVAAATQLIATVQSPVEFLQ # SHAGRIYDTVTLGFVIDVNIPEILKEAGTQVAFISRCFSLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # start gene g39 Scaffold_1 AUGUSTUS gene 236066 237404 0.29 + . g39 Scaffold_1 AUGUSTUS transcript 236066 237404 0.29 + . g39.t1 Scaffold_1 AUGUSTUS start_codon 236066 236068 . + 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_1 AUGUSTUS CDS 236066 236918 0.29 + 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_1 AUGUSTUS CDS 237001 237404 0.99 + 2 transcript_id "g39.t1"; gene_id "g39"; Scaffold_1 AUGUSTUS stop_codon 237402 237404 . + 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MAETLLAILLVNSSAKGSTLVYHWPPDPVVPPRLRRALPMDLTASQSISQSHIQQEDIDPSYRWERTNSSNRDRSLSY # THSPSSGRTTPAQNDIDELEDREVRNKDKYENVFGYASEFLASILCPSTSMCHQKFQLTVDDLAFIGHPVCADWDGVWRFNSGRAKTTSSSRGGNSRD # RGGAESGSPSPANRSLSLDKKNSGQEMSNSAGPSTKCTWLHTFNFVLVLDLPDPSSSASGNLSKYFDILYDQIGFIVAAVLFQEQVLSNFVEQECDLL # GSLKDDCIRKSISSVASAMKTLYDAIKSSSVAYLSIHDLPLELQLPPHLDDLLHNEEDSELDTSHLDTNANYSEAEEFWGTEMSFGWQLPALAPWKSL # LLLDEIDSEQGQEAFANLRSPYITPEDRPVVEGLMRFLDTVNVTLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 Scaffold_1 AUGUSTUS gene 237934 238731 1 + . g40 Scaffold_1 AUGUSTUS transcript 237934 238731 1 + . g40.t1 Scaffold_1 AUGUSTUS start_codon 237934 237936 . + 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_1 AUGUSTUS CDS 237934 238731 1 + 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_1 AUGUSTUS stop_codon 238729 238731 . + 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MLKHDLIIVLHLRIRVVATPEVKSLVKAQKGNANARKVQRLDRKKKRKEKTDSDGNNERIIERGRERKRSTPALTTLN # SSSFTTAESGLGLEIGASPISTPEQNQYDNDNKKAFAWLSMSPKSARKHSQNSQPTRAVSATRSTSTRVPSSDSVHSNHSGQSKLSELILDETDEDEG # CGRDEGPDASDGDGRRMSQDIEEEGEDDDEADDENEEETEVDAETDTGSHNVDVPSMIKDPGRATSLQRRWLNAMSLGKDQILTRRFEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 Scaffold_1 AUGUSTUS gene 261892 262371 0.29 + . g41 Scaffold_1 AUGUSTUS transcript 261892 262371 0.29 + . g41.t1 Scaffold_1 AUGUSTUS start_codon 261892 261894 . + 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_1 AUGUSTUS CDS 261892 262371 0.29 + 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_1 AUGUSTUS stop_codon 262369 262371 . + 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MYQSRYSKLGIPSSSYSSGTLFEEGSSSSISQRATELSGPSSQGVSLFPSNSSWPSQEFLSESQPLGLFCSDLSAEPS # QAYHEPNELPQNYPTQMIPDVLHPPLPQATSQSNLLSPLTELTHQVPMGSNNDISVLPSFEMDHLVCFPEADLRILDSLDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 Scaffold_1 AUGUSTUS gene 263321 264410 0.78 - . g42 Scaffold_1 AUGUSTUS transcript 263321 264410 0.78 - . g42.t1 Scaffold_1 AUGUSTUS stop_codon 263321 263323 . - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_1 AUGUSTUS CDS 263321 264314 0.92 - 1 transcript_id "g42.t1"; gene_id "g42"; Scaffold_1 AUGUSTUS CDS 264388 264410 0.78 - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_1 AUGUSTUS start_codon 264408 264410 . - 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MNRFPTRECGEANMYFEGIRCQVTPGSDPKPLGTPKAPVWCEDDTSACVTGPKQMLFWHQASGNNIEVDGLDLAGEFK # SPGYNAKCGFSNGEIDRFNYALCRTHFCNLGAQNDIFDDSGTVSSSPSSSTSSSSTSAAATTSASTSAVAAAAITSAAGAVAVNIANPSSASDDSASS # STDSSTTATDSSTSSTDALTTATDSLTSYTDASTSATDSWTSSSDTWTSSSDTWTSSSDTWTSSSDTWTSSSDTWTSSSDTWTSSSTESWTSTSDATL # STTSDSSTYVATSTDVAAAAAVTTSTSSDGRRCKRREPRVGRRDLNHRAASVHRRNAYKHHDLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 Scaffold_1 AUGUSTUS gene 270441 270896 0.8 - . g43 Scaffold_1 AUGUSTUS transcript 270441 270896 0.8 - . g43.t1 Scaffold_1 AUGUSTUS stop_codon 270441 270443 . - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_1 AUGUSTUS CDS 270441 270896 0.8 - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_1 AUGUSTUS start_codon 270894 270896 . - 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MESLGATIVDPANLPSADEIKGLDHLVLYVDFKIELNEYLSALKEVPTGVRTLADLIQFNIDHAELELPEGYSDQGEL # IKSQATNGRDEIYGKALAKNLELGATRGIDAVLKEYNLDALVLPAKDTHTPAAIAGYPTVTGMSQPLEFCFAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g43 ### # start gene g44 Scaffold_1 AUGUSTUS gene 273124 273498 0.74 + . g44 Scaffold_1 AUGUSTUS transcript 273124 273498 0.74 + . g44.t1 Scaffold_1 AUGUSTUS start_codon 273124 273126 . + 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_1 AUGUSTUS CDS 273124 273498 0.74 + 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_1 AUGUSTUS stop_codon 273496 273498 . + 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MSSTVTVPTTARAAVIATIKEDLVIKEVNVIQPSELAAGECLVKVEYAGKFNGSSTIFTTDKLSGCCHSDVHVKNNDW # GRTQTPVIGGHEGVGHVVAIGANTVGSPVKVGDRVGMKWFANACLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 Scaffold_1 AUGUSTUS gene 275315 275641 0.57 - . g45 Scaffold_1 AUGUSTUS transcript 275315 275641 0.57 - . g45.t1 Scaffold_1 AUGUSTUS stop_codon 275315 275317 . - 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_1 AUGUSTUS CDS 275315 275641 0.57 - 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_1 AUGUSTUS start_codon 275639 275641 . - 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MEEYATTHESVQYVVEWHNRAKRKAKIKRFNKSNDDLSSEDLPVHNKTIGTISRPKKPTEKRTSPAMKRSRFSAAVFD # PARIARMINATKRTTDQTRQVMVFNEKMEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 Scaffold_1 AUGUSTUS gene 286503 286904 0.62 + . g46 Scaffold_1 AUGUSTUS transcript 286503 286904 0.62 + . g46.t1 Scaffold_1 AUGUSTUS start_codon 286503 286505 . + 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_1 AUGUSTUS CDS 286503 286904 0.62 + 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_1 AUGUSTUS stop_codon 286902 286904 . + 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MTSIVRSTNDAVQAYPISSSCGAFSPELDAKMERQGSDFGETLNIHEEYTFPLPAQSRDDFPPRIVQSSALKTVPPTF # TNPFDGNKKIEFRETCPGEVIYSTERAWTQRNYFGSDDDEVYIPLKRGMRSKFST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 Scaffold_1 AUGUSTUS gene 295543 296403 1 + . g47 Scaffold_1 AUGUSTUS transcript 295543 296403 1 + . g47.t1 Scaffold_1 AUGUSTUS start_codon 295543 295545 . + 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_1 AUGUSTUS CDS 295543 296403 1 + 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_1 AUGUSTUS stop_codon 296401 296403 . + 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MPVEPASTSGISFATNLTPITFNDPDTGSVIAGDAPESELFPFANDPSSPRRPAHTKKKAENHIPRPPNAFILFRSSF # IKSQHVSTEVETNHSTLSKIIGLTWQNLPEDERQVWHSKAKAALDDHRRKFPQYAFRPLHTKAKGGTEKRKVREVGPKDMKRCAKIAELLVEGKKGHE # LDAAIQEFDKYHVPEMVTRFEAPITERTFQCSSESTVKTEDSDAIGPIPSRPSRSTSRSPQMQSPSVDGDAQYTQSRSASPGPPPLVDRDQVEQYLSQ # LASSGFPPPLSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 Scaffold_1 AUGUSTUS gene 307451 307975 0.54 + . g48 Scaffold_1 AUGUSTUS transcript 307451 307975 0.54 + . g48.t1 Scaffold_1 AUGUSTUS start_codon 307451 307453 . + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_1 AUGUSTUS CDS 307451 307975 0.54 + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_1 AUGUSTUS stop_codon 307973 307975 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MDMMRGVTGVVRESLERADAWVERLKTIGVQRGDGSSNPQADSDRPTSSSSSSPMEMDRGRTNHDLASMPYVYRDSED # SALLSPLSLAGRSRRGSFGSSTGFDQRGGSLPTTPGLTSYPSGPYVPSPFLHNGLSMDASGPEVGLGLRRMSIRGDEGDMVDVKKEEQEVEMDLDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 Scaffold_1 AUGUSTUS gene 309932 310540 0.78 + . g49 Scaffold_1 AUGUSTUS transcript 309932 310540 0.78 + . g49.t1 Scaffold_1 AUGUSTUS start_codon 309932 309934 . + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_1 AUGUSTUS CDS 309932 310540 0.78 + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_1 AUGUSTUS stop_codon 310538 310540 . + 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MVPRTITSFEDRGVPSPPPHAYYPGHPSFPLSSAHPYSSSAYASASYSSGSPRNDRRASSTSSSPPASFLSSEWIDRP # IGTEDRVERAQLNRNSARLEYDISVERIDQLPLEKSGHGAKGGKGSKEGKEQLRVAVQEVVELETEYEVDLLPEEHPQQLPLWRKWLAVVVVSCCSFC # VTGSSSMVRLPCILYFLCQTHRILLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 Scaffold_1 AUGUSTUS gene 314076 314528 0.83 + . g50 Scaffold_1 AUGUSTUS transcript 314076 314528 0.83 + . g50.t1 Scaffold_1 AUGUSTUS start_codon 314076 314078 . + 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_1 AUGUSTUS CDS 314076 314528 0.83 + 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_1 AUGUSTUS stop_codon 314526 314528 . + 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MGRSLIDTNSFLHTSDDEHAVSLPDATIGDIFGDRNNVATTPVSPPPPMPRRRTIDHNFIYVAQIDWKVFRSSKIRFG # TGQRSGLEIPVKDLFRKEGWGFWGRHRVFTGEDGQEYRWNLWEDSSPGTYIRLAVALFSDPRFKFGTPVSPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g50 ### # start gene g51 Scaffold_1 AUGUSTUS gene 323367 325185 0.63 - . g51 Scaffold_1 AUGUSTUS transcript 323367 325185 0.63 - . g51.t1 Scaffold_1 AUGUSTUS stop_codon 323367 323369 . - 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_1 AUGUSTUS CDS 323367 324469 0.69 - 2 transcript_id "g51.t1"; gene_id "g51"; Scaffold_1 AUGUSTUS CDS 324519 325185 0.69 - 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_1 AUGUSTUS start_codon 325183 325185 . - 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MARCRRDGSDEQPCRCQECLKHNPEGLLVSSSTLNAHRHRERLRAAFSGVENPESNRTDEKNNSESISSGSAQPGPMP # HIPSPPPLSVEMEENENWLRSIVSEKDIRLETLYDSETHLEFINHPSPNLSFVSPDPETLLHVNSGDFSLKTTSTRNMRFLETEARLCGLLKQIQALP # PAVRSIGELDVENELYTALDKIHRFKGRQWKLQAYPNGIGGMTVNNTRHFTAHKPNPDIAPIFIAALIIYIKFQTPVRQMRVILALLRCIIRALKRNL # VDSHLSSQIPMDVHTIVDCYDIDPTLHAFVACPTCYALYPLTDEALKNAESVFQADQPLPVCDERSHPDSAPCGTTLWRTRRIDHRMFVTPIRKQIFQ # DLKEWIGRIVATPGIEDAMDQHQQSSPPADGDPERDFVDSTTFRQFKGADGEPYAIPQVGPSGSPDLRLVTSLGFDAFNPFHSKTAHAIVQSTALYMV # ILSLPEHLRYRPENMYLLTVMTGKPSQHHINFTLRKLVKQLLPFWEGLFYVRTARYLLGRRVFIVLIPAVCDTEGAHQLSGFASHSHTYFCRRCLLQI # GDIHNLVPETWIMRDPLSIES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 Scaffold_1 AUGUSTUS gene 328740 330506 0.16 - . g52 Scaffold_1 AUGUSTUS transcript 328740 330506 0.16 - . g52.t1 Scaffold_1 AUGUSTUS stop_codon 328740 328742 . - 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_1 AUGUSTUS CDS 328740 328888 0.57 - 2 transcript_id "g52.t1"; gene_id "g52"; Scaffold_1 AUGUSTUS CDS 328977 329279 0.49 - 2 transcript_id "g52.t1"; gene_id "g52"; Scaffold_1 AUGUSTUS CDS 329408 329815 0.42 - 2 transcript_id "g52.t1"; gene_id "g52"; Scaffold_1 AUGUSTUS CDS 329918 330506 0.72 - 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_1 AUGUSTUS start_codon 330504 330506 . - 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MPLMLYWGSLNNWSIPPTLDHLISTPNSSIINTLISEQRPYPPPPLPIEEQIPREILTNKPRLRLPRLDGGSLPRPNE # SLFDFIQRREVHRLKVIASESPVERQSRLQREENATKDRPRVEKVLAVYYWDLVEGTRVRTPVGRSNYEDIWERYGSHQRRYDSVADEWEVCTDFDPN # DAPDDYDLDSDDDSDYFITVQFNEAIEDVAYHRFGFLKQPFAENRDIVLKSQVWKKVLGLFGCGRRHAALEVDIHIKLQLCRFISALSDAADLRHAPE # VYDLSFRSLMQPLIPFEVDTLTSYNGRYYLIQAKDAKDNEEYVIAFRSAATVMELTRRSFRPVGFVPTLQDYRSYELIRNDFLRSARGRSALLAGGII # ARLARGIVNVNDVYDGPTGHALHEGEQALCVWEAGQACAFWDDQLTGEEMDLICGSYEVATDGDKVLVASFRFLEILWSQLWILVERCRRLVPKPFGP # NPKIYGAIDPDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g52 ### # start gene g53 Scaffold_1 AUGUSTUS gene 339359 339766 0.73 + . g53 Scaffold_1 AUGUSTUS transcript 339359 339766 0.73 + . g53.t1 Scaffold_1 AUGUSTUS start_codon 339359 339361 . + 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_1 AUGUSTUS CDS 339359 339766 0.73 + 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_1 AUGUSTUS stop_codon 339764 339766 . + 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MEMRLPALFSLSTNTVDIDRSSDSDSSRTMDSYDSVPQSPDAGEDDPMPLAPLNPQTMPQMAPQVPQAHFHTQSPHPP # QTPPPQTPPPQTPPPQTPPPQTPPPRSEDFQMDDINATPRAPPDMTPRAPQAPEINR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 Scaffold_1 AUGUSTUS gene 342753 343226 0.56 - . g54 Scaffold_1 AUGUSTUS transcript 342753 343226 0.56 - . g54.t1 Scaffold_1 AUGUSTUS stop_codon 342753 342755 . - 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_1 AUGUSTUS CDS 342753 343226 0.56 - 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_1 AUGUSTUS start_codon 343224 343226 . - 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MFEYNSGLDTTLRPPTPHVKLWTHLNNYQHDHVMFEYNSGLDTTLRPPTPHVKLWTHLNNYQHDHVMFEYNSDLDTTL # RSSTTSNSSCQTLDAPSHLPLDQWNCVIWFRYQRNVLPNSMNCGINAQKMSRRRSTTRDPLTISSLKQFNRFFTFSSID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g54 ### # start gene g55 Scaffold_1 AUGUSTUS gene 361362 362369 0.5 - . g55 Scaffold_1 AUGUSTUS transcript 361362 362369 0.5 - . g55.t1 Scaffold_1 AUGUSTUS stop_codon 361362 361364 . - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_1 AUGUSTUS CDS 361362 362369 0.5 - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_1 AUGUSTUS start_codon 362367 362369 . - 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MPSISKIRQTNAAALSAKQYIPTAVFVGGTSGIGEGMAEAFAKTHSRECSYHPRRSKSRRGREHHITLPQANLADAKH # EFVQCDVALMRNIRNASAEIRSKLPKLNYLAMSPGFMTTSGRNETEEGIDRKLAVHYYSRWMFTKELISLLEKAQEQGEDAKVFTVLAAGAGGPIDVN # DLGLKKTYSLKNAALQAPTYNDLMTEVRFLAQRLFSTDTARQEFAARHPTITFAHAIPGAVRTNLFSAAEVSTFTKKAMGLSMTMFGFLLTSIEDCGE # YMLNGMLNVASAPGAWRIDSHGEDLAKRRYYGSEEERKKLWEHTVEATREKLRGVTRLALF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 Scaffold_1 AUGUSTUS gene 369503 370839 0.88 - . g56 Scaffold_1 AUGUSTUS transcript 369503 370839 0.88 - . g56.t1 Scaffold_1 AUGUSTUS stop_codon 369503 369505 . - 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_1 AUGUSTUS CDS 369503 370528 0.88 - 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_1 AUGUSTUS CDS 370591 370839 0.95 - 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_1 AUGUSTUS start_codon 370837 370839 . - 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MHTQVISRSTVKTKSLAPEWNELWRVKNVPTTSELRVEILDKDTDTPHDDYIGKFKTTIEAGEKEIDIQGPLFRKDRG # TFKLKIETAPSTDPAEPKYLFDGPIRYSRHFSPLVGKLTDLDDARLYSTWKMYLIDVPVYFKDVYQHWNVKYKAAQSIFGSGPTSLAIRAGIHAGHKM # LYARSTSNGFGVIQSVDDVMRLFEGGSLDPKGILRSEREDLSQEEQRQLEVAEEVDATAAPTKESPFARRIKPAVYTYIISAQDDSLRFSETGAAFFV # DFASKHALHANCAEQVRYSGEFHLRPRAKDHSSWCGWQDFNDSMPDDSVDWEVVIDNNSGTYAPDKAMLPTLRDLIDCNFPGLDVVALDREDEELKKS # VDACQEYALKYRGVKSEHLQPHQQEGHRSLLKPLGAVMGKVAHLQRGNKEEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 Scaffold_1 AUGUSTUS gene 371746 372861 0.38 - . g57 Scaffold_1 AUGUSTUS transcript 371746 372861 0.38 - . g57.t1 Scaffold_1 AUGUSTUS stop_codon 371746 371748 . - 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_1 AUGUSTUS CDS 371746 372351 0.75 - 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_1 AUGUSTUS CDS 372427 372861 0.38 - 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_1 AUGUSTUS start_codon 372859 372861 . - 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MQAIVVKFNRQVVVCSLFKSKVTVCDLPGPFEIIVVVSRDQTRTTWISFPMKRTPSSPSSPTHKASRTTASKSNSANP # LLCTLPPTCSTHPTALADTRELEAHYAKYHAWVCQAAKPTSGTCGNVFPDARLLELHHTECHDPIAAFACFLPLTVCPKVFASPKARRLHLIAVHGYP # KEYFFAVVNKGVAGLLAKWGDGAGMIRRTWKPRPKEGEQVNNPNKTEDDQEDSEGTTDSEESEDSSEPETTTKAKTSNGNQPSSMAMDIDALATSFQT # SLSVSSVPSSIRFGRGAKRGTRGGRGANSITSKSHRYRLSDPDEEATMDAAPSRDRGGYRGGRVMRGRINRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 Scaffold_1 AUGUSTUS gene 375475 376119 0.95 + . g58 Scaffold_1 AUGUSTUS transcript 375475 376119 0.95 + . g58.t1 Scaffold_1 AUGUSTUS start_codon 375475 375477 . + 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_1 AUGUSTUS CDS 375475 376119 0.95 + 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_1 AUGUSTUS stop_codon 376117 376119 . + 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MTSFESSGAATIDKVADFPDALLLNGMGLLNLEEGLVYVADPYAGAISILNVNTGAHYVAINNSLTIPAAPFTTPLGV # NGVHVFQEPDGPLYVYFSNTAQSLLARMPIDATGTPIGDAEVVASGIMADDFTFDSDGNVLQAVIGSDEIVKIDPSTGTVTVIAGSPNNTELRSVSAA # QFGRLSNETTTLFVTLNGGNLGAGGPVVPGAVKMLDLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g58 ### # start gene g59 Scaffold_1 AUGUSTUS gene 383045 383623 0.61 + . g59 Scaffold_1 AUGUSTUS transcript 383045 383623 0.61 + . g59.t1 Scaffold_1 AUGUSTUS start_codon 383045 383047 . + 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_1 AUGUSTUS CDS 383045 383623 0.61 + 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_1 AUGUSTUS stop_codon 383621 383623 . + 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MLSTKITSFTTLADQRPRREGLRSNNKQVSDSLPVERAPSCQIGSDRSSPVQITESQDTSPDSNCPDSNSPRLSLPSS # DDSMTTRVNESGNIELCSGKYGPRVKPGVVLSPEDLDDLYEEARRHAKTKSTEDIENVREIIADAFPSRVHRDWFRSEKLGHLGLALESKDASDETAP # PTFPFLDALPTQILRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 Scaffold_1 AUGUSTUS gene 386886 389702 0.64 - . g60 Scaffold_1 AUGUSTUS transcript 386886 389702 0.64 - . g60.t1 Scaffold_1 AUGUSTUS stop_codon 386886 386888 . - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_1 AUGUSTUS CDS 386886 389702 0.64 - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_1 AUGUSTUS start_codon 389700 389702 . - 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIIS # RLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLT # RLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKA # FDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDH # SNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEG # LKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHP # RAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLG # IKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQ # DAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSING # EIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 Scaffold_1 AUGUSTUS gene 390650 391812 0.14 - . g61 Scaffold_1 AUGUSTUS transcript 390650 391812 0.14 - . g61.t1 Scaffold_1 AUGUSTUS stop_codon 390650 390652 . - 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_1 AUGUSTUS CDS 390650 390858 0.43 - 2 transcript_id "g61.t1"; gene_id "g61"; Scaffold_1 AUGUSTUS CDS 390954 391812 0.14 - 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_1 AUGUSTUS start_codon 391810 391812 . - 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYYIRYGTRFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 Scaffold_1 AUGUSTUS gene 392569 394601 0.79 + . g62 Scaffold_1 AUGUSTUS transcript 392569 394601 0.79 + . g62.t1 Scaffold_1 AUGUSTUS start_codon 392569 392571 . + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_1 AUGUSTUS CDS 392569 393717 0.86 + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_1 AUGUSTUS CDS 393795 394601 0.89 + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_1 AUGUSTUS stop_codon 394599 394601 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MIGAAYFIDNDPGANKIFLVTDASDWRHGAILMWGPTLDSARPVAFDSAQFSGAELNYPVHEKELLAIIRALRKWRAD # CLGMRVHVLTDHRTLENFEKQKDLSRRQMRWQEEISQFDLEIAYIPGDENLGADALSRIRAWALPSEIREQLPGSSNVESWKANPFTCASVLSLSADK # EFLNQIKLGYVSDPFIVKLVEGGSLVPNVTREHGLWFVSGRLVIPNYLSLREDLFHLAHDTCGHFGADKTYAMLADSYYWPHMRRDLYKFYVPGCEDC # QRNKGRTAKNVKGPLHPLPVPEGRCDSVGMDFIGPLPNDQGFDCILTMTDRLGSDLKIIPTNIDISAPALAKLVFDHWYCDNGLPLEWVSDRDKLFVS # DFWRTLNGLTGAIRFYVERNQMGWVNALPKIRFDIMNTVHASTGLSMFELRHGRSPRVLPPLVGDVDVSGFDPSQNDNDAKVFLDNIALTVREARDNL # TLAKVVQAFQSDKNRGPCELFEEGDWVMLSTYHRQEVFKKSGEKRAAKFFARFDGPYEVIKAFPETSHYTLDMPNQPGAFPSFYVDQLKRFVPNDAAL # FPGRERHMPEPTIVDGHEEFFIDRILDSRRRGRGWQFLVRWVDQGPSEDRWLSYTSLHNCSALEDWVRNGGDGPADLLNSVEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # start gene g63 Scaffold_1 AUGUSTUS gene 398628 399263 0.91 - . g63 Scaffold_1 AUGUSTUS transcript 398628 399263 0.91 - . g63.t1 Scaffold_1 AUGUSTUS stop_codon 398628 398630 . - 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_1 AUGUSTUS CDS 398628 399263 0.91 - 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_1 AUGUSTUS start_codon 399261 399263 . - 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MISIACDAYHNFSIDGHRLTVIEVDGENHEPATVDNIQIFPGQRYSFVLTATQPVDNYWVRALSSSGVGFSGFTGGLN # SGILRYQGAPDADPTTTNSTGVVLTESMLHPLENPGAPGLPFPGGADEVLNLTLGFNLPATFFMNDTQYIPPTVPVLLQILSGAQSPQDLLPPGSVYT # LPINKTIEINFFGNATPGGPHPFHLHGVRLIQSSY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 Scaffold_1 AUGUSTUS gene 409467 409991 0.34 + . g64 Scaffold_1 AUGUSTUS transcript 409467 409991 0.34 + . g64.t1 Scaffold_1 AUGUSTUS start_codon 409467 409469 . + 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_1 AUGUSTUS CDS 409467 409991 0.34 + 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_1 AUGUSTUS stop_codon 409989 409991 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MNVFDSHCGSKPVQTQHTQPPLSLPQSKHQGLLDGLSDIFEGKETRNGRQEEEKAERQRLELKADTAKHAHLPLDIFE # KLGFGNPPESKYHSAPPSKANGETLLEQLGSKLHPSGGDVGEHSLSLKDQSFAERLDSMMHHRKADNSSQLSGGITDKIQSALGGGSEAEENEGQE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g64 ### # start gene g65 Scaffold_1 AUGUSTUS gene 412599 414736 0.72 - . g65 Scaffold_1 AUGUSTUS transcript 412599 414736 0.72 - . g65.t1 Scaffold_1 AUGUSTUS stop_codon 412599 412601 . - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_1 AUGUSTUS CDS 412599 414517 0.97 - 2 transcript_id "g65.t1"; gene_id "g65"; Scaffold_1 AUGUSTUS CDS 414571 414736 0.72 - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_1 AUGUSTUS start_codon 414734 414736 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MEPDIWTSIPNTTNAQEAQHWKLYSAVGRDHGLLEGLEALHAVAETTVKLFTANLEGGLIRYGKAEPWKAMINLIGRS # KPSRAPGGRSTKQKSDGRPPDTKKDLLSRTPKKSKELPSTHHTNSAIVGPASYRWDNMSCWADSAWDLLYRSIVKDWASFSSRFSSDSQTERPIRDFY # NLMLLRRNAEHDSFILKVPDYDLSTALSSQRDQFRRRLVEWRIIKSDNAVGNAFVSYSSYVSQQSYLNLTYCWKDWFPQVLKDKLNDDLDDDNWTQSY # FQTMFVTIKHCSGDGNGHHYQVCQKPEIRYLIVLRQAACQEFKGDLLSWLQTFANVNHSPQALPTCWRARDGESWCKGSQTDVKFILSLPVVLILEEE # ECTTSTEFWNFPALLQPYKSGELATVTYDIVGRIFYSRSKNHYISRFLDEDGKTVWTYDDMAHGGCPYVEPGATAGTHLTGSSSTLKLPSDFIGAFAI # YHLRNGTSTQEAIYTSQLAVARRVHHMMVEPDSLRHHVPKIWLSRVKFAQLTPHDLTWLKNPFRLDTLDYQETTESSGTIRIPPRSTLSYQPNHESSP # FLSSPTSKNLLEPNSVSPQEQDQMHSVETLDHGLNVDLIEEYLQEGTSDFQFMCRCGITTTNETLVVHNSSTGDIIQCDNCDIWSHIACQKEGRAGGL # RQTREPFQCDGCAGNSRAIIDSFIPGKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 Scaffold_1 AUGUSTUS gene 415095 416456 0.61 - . g66 Scaffold_1 AUGUSTUS transcript 415095 416456 0.61 - . g66.t1 Scaffold_1 AUGUSTUS stop_codon 415095 415097 . - 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_1 AUGUSTUS CDS 415095 416456 0.61 - 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_1 AUGUSTUS start_codon 416454 416456 . - 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MPMYGFAHNQVFPQPPVSTSGPPVQPVQNPTLGKKNSSQQPNTVPGHLSAADAGLNTVPSINIVPPTPVLGSVVLPSQ # QTAKSTSPSEYQLAGKKNPLLSPNTTPESWDGWLDGNLEADFTWEELAQTGDLRVHWARKDYGSRAGVGNAFAEHWSAGKKNTRSCLGVISCTNEQCL # TIIRPHSVSGGIQRQLLKQCQCGAQLQHFPCAVKTIIWTWQGGKHWQNIGFHNHQRITHILHLLPGEQTRFEELIDINPDTTPSQLLVGRRTLHGKRK # SASDISPVYNNRDRIAKDRQKVINGAKYSGGDSFVSGFRDFHRDFPGFIVHTIFGEINMICLQSEFMRSRLGGMFKHHQEPVNGIVSDAAHGFWRERN # SLLITSSIYEAELHCWVPGLFSYSDGASAEHYMHHFLVLMLSIAHECEANDTIIADRHFAGVRSSTHSHQNWNLNDILVDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 Scaffold_1 AUGUSTUS gene 418639 418974 0.55 + . g67 Scaffold_1 AUGUSTUS transcript 418639 418974 0.55 + . g67.t1 Scaffold_1 AUGUSTUS start_codon 418639 418641 . + 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_1 AUGUSTUS CDS 418639 418974 0.55 + 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_1 AUGUSTUS stop_codon 418972 418974 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MYTERINDAGFAFVSADYRLIPTGSITAHHILEDVKDAFAFLRSKTFEAALDSLDVEGKLPYPKFRVDPRRIAAAGSS # AGGTCAYFAATHVEPKPAAILSVFGMGGDILVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g67 ### # start gene g68 Scaffold_1 AUGUSTUS gene 420467 421288 0.4 - . g68 Scaffold_1 AUGUSTUS transcript 420467 421288 0.4 - . g68.t1 Scaffold_1 AUGUSTUS stop_codon 420467 420469 . - 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_1 AUGUSTUS CDS 420467 421288 0.4 - 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_1 AUGUSTUS start_codon 421286 421288 . - 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MEFCEEHILRRQYEPDDYIFPTINANGVTFQSKQPITPEAVQKMIDNFTVAAGVPGAFTTHCFRRGGAQYRFMFAPIG # ERWTLARIRWWGGWAPNEKVILSDSLSLLVTAIKRDTLIRYLLDELNTYEEDHSDALAPIDRRASESHAGEAAEMGPLSAAEGRQLFTMVGSTIKKEF # AAIYTSQHHLPQGSAPYGPYPYQGYIWPSLPVPKPSLMPSLSSYLSQMAAPAPNQVIYSSTGSFTPQPSTKILPELDYLPNYSEDTTFPECMEASHH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 Scaffold_1 AUGUSTUS gene 427020 428383 0.81 + . g69 Scaffold_1 AUGUSTUS transcript 427020 428383 0.81 + . g69.t1 Scaffold_1 AUGUSTUS start_codon 427020 427022 . + 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_1 AUGUSTUS CDS 427020 427031 0.87 + 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_1 AUGUSTUS CDS 427118 428383 0.81 + 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_1 AUGUSTUS stop_codon 428381 428383 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MSKPPVPLPRELSDFIPADIYELIISFLNHDPVTLKFCSLTCKSWLWPSWKTLFQSRTIHIHRKNIDDFLKLINLNAH # TITIIRFIQHLHIEQGGSKRLPVSWQLPWGIQESGDYEIFQFDDFLHLFTGLTAVKTLKLGWIRCDTSKSTSDALRGNFGSVTTLDLDSVILSSSDHF # FDILGAFPLLSSLSLTGVLFNGGRLYDGLDNWDELDARRTVLEHTPPPPSSLNELYTNVTEDVSEFLFSWMTYHHIPLPMRSLSTGLFSESSNAALSK # FLFHSGSTLENIMIRDAHESTALDLSPCVNLRTLEIGCVDLQSSSVDERELGSETFVTNILRTVASDNVEYLKIVLAISGYEDAHVQIRAFDWRGLIS # ILERSQFQDILVEISVSGYETDVEDAISEYVLAVNTAQRAALLATFNVKKWTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 Scaffold_1 AUGUSTUS gene 429712 430077 0.91 - . g70 Scaffold_1 AUGUSTUS transcript 429712 430077 0.91 - . g70.t1 Scaffold_1 AUGUSTUS stop_codon 429712 429714 . - 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_1 AUGUSTUS CDS 429712 430077 0.91 - 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_1 AUGUSTUS start_codon 430075 430077 . - 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MDWLDDLDQSWAAVLQAQVWNPSEGIGEDLIVDAGDVVRGVKSTPMSQTERTRLKSLLLGGVATLEEWLEGKPIGVNR # QATAVEEEDGLNDIFSNTLEELGHLGLVAVEPEELCSMDLDDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g70 ### # start gene g71 Scaffold_1 AUGUSTUS gene 434119 435063 0.81 + . g71 Scaffold_1 AUGUSTUS transcript 434119 435063 0.81 + . g71.t1 Scaffold_1 AUGUSTUS start_codon 434119 434121 . + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_1 AUGUSTUS CDS 434119 435063 0.81 + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_1 AUGUSTUS stop_codon 435061 435063 . + 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MRAQQLRPDRKRLSTAFTDFIQVLTLRIIVVALLDPDRDIESIDAEDLRVSAMLITKLWGISKLKISSTVPLMDAPCT # SPDIDDLTTLNYHLRRLLPDTEKYPNPINFVIPTWETLWRVVATCLAHVHENVEFRQVFEELLEDPTSERFKTTSFDSKLCADWIVSETLRLHPPSRH # ISRSFVVEQPPFLQFVRTLLPRSVSDQLGLAPLIRSEIADVEGIHLSIGIWGADALEFNPRRWARYTSSLEAPTLFAFGYGPLICIGKNWAPMAAALI # VGAILEGIEREELEIVGTGIIGGRAGWIGWRVQSREAFKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g71 ### # start gene g72 Scaffold_1 AUGUSTUS gene 439876 440466 1 + . g72 Scaffold_1 AUGUSTUS transcript 439876 440466 1 + . g72.t1 Scaffold_1 AUGUSTUS start_codon 439876 439878 . + 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_1 AUGUSTUS CDS 439876 440466 1 + 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_1 AUGUSTUS stop_codon 440464 440466 . + 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MAWRSFLKKKDWCTSQTVGVGIVNILNVNTGENFVAINNSLTNQPPGASEISNCVHGVHVVQLTPNSQKYLYFSNYAQ # GIIGRVPIHDSGLASGAAEVVAGNLTTPEDFILDTEGNIFLALFQANQFIRIDAHTHEITVLAGSPDSSEYKWAAAVEFGRRESDKDSLYATIDGGYL # ESDNVGGALFRIRGGDIAVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g72 ### # start gene g73 Scaffold_1 AUGUSTUS gene 440844 442010 0.52 - . g73 Scaffold_1 AUGUSTUS transcript 440844 442010 0.52 - . g73.t1 Scaffold_1 AUGUSTUS stop_codon 440844 440846 . - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_1 AUGUSTUS CDS 440844 441229 0.79 - 2 transcript_id "g73.t1"; gene_id "g73"; Scaffold_1 AUGUSTUS CDS 441349 441501 0.66 - 2 transcript_id "g73.t1"; gene_id "g73"; Scaffold_1 AUGUSTUS CDS 441770 442010 0.53 - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_1 AUGUSTUS start_codon 442008 442010 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MSFENRVQKALVIESPKTPFVLKTVPIPKPGPGEVLVKIIASGLNPADWVIQTRDYFAPHTPYPAIIGFDIAGDVEEV # GPASVSLTFTTAVYGLLPAHPIGMGLNPTFDDTVSYPEEAALVIGGSTSVGQYEFLKSLGATHVIDRNQISFADLPAALPKVYVQPIKVIYSAVTLPE # AQNAAYACLANDGKLAVATPQLALKEDAETTGKKLYGVFGSPYTPANREFGLVLWRHLPRLLESGVFVVSTKSKFVSLLTFRP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 Scaffold_1 AUGUSTUS gene 442943 443380 0.74 - . g74 Scaffold_1 AUGUSTUS transcript 442943 443380 0.74 - . g74.t1 Scaffold_1 AUGUSTUS stop_codon 442943 442945 . - 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_1 AUGUSTUS CDS 442943 443380 0.74 - 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_1 AUGUSTUS start_codon 443378 443380 . - 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MVDDAIMKLLTFPDRPTDNTASLSRLDTDNQNTDVGNEKEFLCPRLEQLTLRRCIAAADGKTSRMVKSRWTLPSPGLS # NGRIDVDVDKEGDELARKLRCVHIEFSNPEHAEDFDVLKEMYSTGLGGDVVVKKGYNSPHVYSHSRH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g74 ### # start gene g75 Scaffold_1 AUGUSTUS gene 460324 462856 0.32 + . g75 Scaffold_1 AUGUSTUS transcript 460324 462856 0.32 + . g75.t1 Scaffold_1 AUGUSTUS start_codon 460324 460326 . + 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_1 AUGUSTUS CDS 460324 461517 0.32 + 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_1 AUGUSTUS CDS 461996 462856 0.93 + 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_1 AUGUSTUS stop_codon 462854 462856 . + 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MFSFFRQSPYVDIFSSSTVSQSDGLVSISPSPPKNLTSIVVNGQTYYASDDPTFTNLVLSPSSPLRGGAPARSVVTNP # VSSRMDSPSSRPSSFLPDVVGVDHQVDEDSFDLCYPPESPKNTMSPIPAPSSSHGLSIEDYDSMDIDLPANFRSIPALRTPSPDLPSNPLEGWIPTPR # SSSTLESRMRPVLPTTSSSKTKIFPSKLERGMSPLKIPYGASPSPPRSLLSSPSHSNSDTSTVNTSPSKSSATGSPSSRLKGKDHLRFHPFSNSKRTT # PSPLVTTPVKTPKPSAAGKKHRDAIIHRALTDALPSPSIPPSGFDNLASSSPPRKSRKELICDALSENDLMDSGDSAGFEEQYHEPQDVVPFIDNNLG # ENGVLNAEWIDPRFAASFRSVVDLPSESQRLFAFFGSLIGSSKFGCPVSEGIIDFRSNQRFDSDAWKDDPDNLSPLEPGQSSPIIIIRPFHVLFFALV # TPGKKRDISNVPKNIHCKNPLPFSRAGAYRSYFPYFVVLTSITVPIFDGRDSFVAAPAQLNQIGSRTYPLYKNSEEDPPTGCIVCVGYTAHTWQSSGS # YKAPPLSLSLGLQFVVVLALPPGYDGPDLPKPISSRPFPKPIYNTPTRTKDFPGPPRRKPPRSKPSSEDAAGSSRISRHAKVNSDDDSPYLHAGGLKE # GFEYHEDVMASKSNRNGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 Scaffold_1 AUGUSTUS gene 465961 469207 0.62 + . g76 Scaffold_1 AUGUSTUS transcript 465961 469207 0.62 + . g76.t1 Scaffold_1 AUGUSTUS start_codon 465961 465963 . + 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_1 AUGUSTUS CDS 465961 467770 0.62 + 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_1 AUGUSTUS CDS 467883 469207 0.91 + 2 transcript_id "g76.t1"; gene_id "g76"; Scaffold_1 AUGUSTUS stop_codon 469205 469207 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MQRNFGGGRPPNKLKGVLAPTLFIEPFTFTCPIQKTNTAPPKMIENLTFKFPPPPISRSHMAGVIDKWCKASTAVHFE # EAGCAVCGQLTLCTNLSALKNMKNYLHLLEAQSVTRAFRDSPNVPFSDIKGPVLDKSAGDRICNNCRSSLRSGTVPKLALCKGLWLGDIPDELKNLTF # YEKMLIARVRHTKCFVRVQKGSTNYSKLVSNVIAFENPIPKIYDTLPPPREEIEEVLAVMFSGSTKPTQDDYARALLLVRRNVVAKALQVLILNHFDY # NDVVFSSANLNSYADNVPIVAVEYFQKGSNRNAEGVSVHDDLNDDGTEEGTCVFTVHGIVGPSIKNMTRDQMIGIAAMHLDNEGKFMRTSHAENPESL # WNNPQLYPKMFPWLFPFGLGGIGTSNIKSFSESSHLNFLLLYHDKRFQLDPNFPLIAFSHQQVKASSSQSYLLAESNKFDEVSNRFLSIDKSVLQNIA # TRMANGEHVKPANDSEIQCFKLLGDLSHAGAKTQGSISSKKNMQSEIWSLINHIGGPSWYITVSPCDFKHPICIYYADTKEKFDVPLRTSSECRLLIS # NNPVAGARFFHLLVNLFLKHVVDIESSEGGLFGPTNPASSFQSQLISFLESVRIGEFLTGSHAYVKETVALQSKSNINYISPERTLPTPPPPYCDCGI # TDCHKCSTFQHWFEEFKCTVDDLLLKSNVHDCFRGISPDGSVLNQDKFETSCLNNAHKKCKARFPRECFQQTSVDPDNGHIDLKKLEEWLNDISPGLT # YLVRGNTDVTSILSGTAIKSAVIYIADYITKTGLKTHVVFDSIKTIFDKSTEIIDGSFSTKEKSRRLISRIVNLLSTKLELGSPMISLYLLKNPDHYT # SHNFIPFYWKTYVSTARSFFGENDSTSEPKLILTKRWDKIVGLSSSLDYTHRPVQHVNYNLYNWVCSFYKVAKRKSKDEVLSDHETELKSSKSVKSTK # GLPFLVGHPLVETHVISTRRNSSMTVPNFIGALPRPNKDDREYYCCTMLTLFCPWRTGEDLKKKDQSWHEPLKLMIFVNKVNCI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g76 ### # start gene g77 Scaffold_1 AUGUSTUS gene 469363 471351 0.9 + . g77 Scaffold_1 AUGUSTUS transcript 469363 471351 0.9 + . g77.t1 Scaffold_1 AUGUSTUS start_codon 469363 469365 . + 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_1 AUGUSTUS CDS 469363 471351 0.9 + 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_1 AUGUSTUS stop_codon 471349 471351 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MNSSDIEDIGHNYDQYTEDKKGNFFLRRESAMRAMKDMLFNIGWVIPLTGSVQSKSITTCSPILLPKEKPQHWDLILK # GMRDQVLATRDKDRGLPPSNNNENINDPGKYRPNIVEICDKHYFDKLGIDYGSIKELTLNIIKCHNLNNEQERAFRIIAQHSAGLVSEPLYMYIGGMG # GTGKSQVIKAVLQFFADRNSSFAIVTSAPTGNAAALLGGSTYHFLLGLNNKVEEVGRGTMAQVCARLEHVQYMILDEVSMLSCSDLYRISVQLCGAKN # KHDIAFGGMNMIFAGDFAQLPPVGGESVSLYSYRRPTDANKYNGQCAAMGKSLWHNVTHVVILRKNMRNTGSSKADISFRLALDNMRYKSCTKEDIGF # LNTLVSSKSPGRPFVGKSPWRDAAIIVGENKHKDEINRLGCLRFASDTNQILTHFYSDDLASSNTDQPMYVKSKKKKQIKSSISKELQHHLWELPTCA # HETHAPPVLSLCIGLPIIIRHNIATELSITKGQRGTVYAWHESTGAFDQCVLDVLFVLLDNPPTPIHVPGLPPNVVPLTRRKTKGIVTLRNDVKISVT # RNQVDILPGFSMTAYASQGQGLNPNATDLNTLNDHHAIYTALSRSRTAASTVILQGFDSRLITGGASGPLRKEYRELEMLDEITCLRYEGALDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 Scaffold_1 AUGUSTUS gene 471719 472624 0.8 + . g78 Scaffold_1 AUGUSTUS transcript 471719 472624 0.8 + . g78.t1 Scaffold_1 AUGUSTUS start_codon 471719 471721 . + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_1 AUGUSTUS CDS 471719 472624 0.8 + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_1 AUGUSTUS stop_codon 472622 472624 . + 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MSLGNKLRRSSAGRQALLKRSQKNIVNSDFANPTQLASLPISLLWSNNSCAFDSVVTIFVYIWMETNITGDEYTNLPQ # LIKDFTEYRQGKHTLESVRDSLRSSLNSKRPREFSLTGFCSSTTILEELLKMKSSFMTTKLQCEQGHLSKRRPHNLKHSLLEDHRLDLPSSTNEWISV # NSPASSNLLCDTCKGSLKKFFHIECAPNVLAFACDGRPHLSIDNVVHLRYNNEDFVYVLKGVIYYIPMREHFVSRIVSSENVIYIYDGMTNNGVPVLE # YTNVNEIDWAQCQSGSASAAIYSRSNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 Scaffold_1 AUGUSTUS gene 474660 475711 0.32 - . g79 Scaffold_1 AUGUSTUS transcript 474660 475711 0.32 - . g79.t1 Scaffold_1 AUGUSTUS stop_codon 474660 474662 . - 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_1 AUGUSTUS CDS 474660 475157 0.92 - 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_1 AUGUSTUS CDS 475258 475610 0.56 - 2 transcript_id "g79.t1"; gene_id "g79"; Scaffold_1 AUGUSTUS CDS 475702 475711 0.62 - 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_1 AUGUSTUS start_codon 475709 475711 . - 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MSKTFYDRVYTAIRAVDPEHAIFFDGNTFASDFSHFGDSHKKWENTAYSIHDYSTFGFPAAPEDYVGTESQQRRLRRS # YEKKREWMDARGLCVWNGEWGPVYARKQYEGKATEKINEVRYHDRLSWSIWCVYSEPSLNIFAYVYVRLYKDIGFQGMVYVSTKSAYMTKFADFLAKK # HRLAVDAWGADVSAVQHVYQPLINHVLEEIPERFRDLYPAPVWKLSDRVGRLARNILVAEFLVNEWAAHFVGMDEAQLDELAKSFLFEECEKREGLNK # ILTDNATLVKEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g79 ### # start gene g80 Scaffold_1 AUGUSTUS gene 504807 505595 0.92 + . g80 Scaffold_1 AUGUSTUS transcript 504807 505595 0.92 + . g80.t1 Scaffold_1 AUGUSTUS start_codon 504807 504809 . + 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_1 AUGUSTUS CDS 504807 505595 0.92 + 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_1 AUGUSTUS stop_codon 505593 505595 . + 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGTEACRFMAQFQNWASEQSDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIQQHLITINIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 Scaffold_1 AUGUSTUS gene 508139 508543 0.82 + . g81 Scaffold_1 AUGUSTUS transcript 508139 508543 0.82 + . g81.t1 Scaffold_1 AUGUSTUS start_codon 508139 508141 . + 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_1 AUGUSTUS CDS 508139 508543 0.82 + 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_1 AUGUSTUS stop_codon 508541 508543 . + 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MDTQQQAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREM # LAIIEALKDWRNFWRDYPSHLTSSLITLTSNFGAQLKTSPAAKLAGLYTFHGLTST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g81 ### # start gene g82 Scaffold_1 AUGUSTUS gene 514391 516491 0.45 - . g82 Scaffold_1 AUGUSTUS transcript 514391 516491 0.45 - . g82.t1 Scaffold_1 AUGUSTUS stop_codon 514391 514393 . - 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_1 AUGUSTUS CDS 514391 515774 0.56 - 1 transcript_id "g82.t1"; gene_id "g82"; Scaffold_1 AUGUSTUS CDS 515896 516491 0.66 - 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_1 AUGUSTUS start_codon 516489 516491 . - 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MVDSYPKLFTLFFAGRDFAPKCIIDGKNIQDYLQEHYIEAMGQMADRIRDAGDLLEECVIGWDSMNEPFEGFCGWEDL # NANPTKQGSTLKKGSSPTPAQSFRLGMGTAQTVDNWNFGTFGPSKNGSVTIDPNGDKIWADPDIEDTDGIHPRWGWQRDSGWKLGTCIWAQHGVWDLE # TGDILRPDYFRYLPRPENLSTVVHHVHPTSCVCCSPPIEETGVDGLNGRCAFAGHYYDGLTLITRHWNWFNADALGVIRGRYSSPIQAVKIGERAIRK # SLQEQLGILKSDTLTLGPYPTIIGEIGTPFDMDDKRSYGWTDDGKYRGDYSRQERALDASLNGADGPNAINYTIWTYCPDSTHQWGDGWNMEDLSLWS # ADDIGLTGRTPTIGDLLKQQGDEASMYGMGRDDSQAVLLRKKVEASQGRIFRQPSAADSSALSLATLGPLEVWSEITSRWKENPFDFLTDGARAVKAF # ARPWPTKVVGKPSNIQFDIASTSFKLTVLVRSEDKLNEEGIDDKDLATEVYVPLVHFAHPRLLPSRENEQTPSEDDTLDGGEVRIAPSPSEISTSTTP # TITNASVGWEGLTEQPDVLDIEVTVSAGRWSVQGQTIKWWYEVPQVGEVDREYTMEIRRTGGAIKTNESLNYESWFEQLCPDLCPESCCVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 Scaffold_1 AUGUSTUS gene 516825 517196 0.59 - . g83 Scaffold_1 AUGUSTUS transcript 516825 517196 0.59 - . g83.t1 Scaffold_1 AUGUSTUS stop_codon 516825 516827 . - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_1 AUGUSTUS CDS 516825 517196 0.59 - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_1 AUGUSTUS start_codon 517194 517196 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MPPVPSISPATGNPTTSSFIHTLDSNFVDNAGRTLLLRGVNLSGSSKAPVDQPSYILDNFWESAEHGGKTFIGRPLDL # DDGSADVHLARLRGWGFNMLRFPITWEALEHEGPYVPLSGIQDIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g83 ### # start gene g84 Scaffold_1 AUGUSTUS gene 517573 518232 1 + . g84 Scaffold_1 AUGUSTUS transcript 517573 518232 1 + . g84.t1 Scaffold_1 AUGUSTUS start_codon 517573 517575 . + 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_1 AUGUSTUS CDS 517573 518232 1 + 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_1 AUGUSTUS stop_codon 518230 518232 . + 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MSTLSTVTVPTSSKTHATVTSLPTVSMSASSKTSTTVTSTALLTVSVSASSKTSKTVTSSALLTVTVTSSSKTGATVS # SLPAVSVSASSKTSTTFTSSTFLAVSMTSNNETGTTVTSLLAVSVLTGSKAGATFSSFPTVSVSASSKTNTTVTSSTFLAVSVTSSNKTGATVTSLLA # IAMLANSEASTTIPSLPAVSVSASSKAGTAIIFRALGCRRAYE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g84 ### # start gene g85 Scaffold_1 AUGUSTUS gene 523710 524393 0.73 + . g85 Scaffold_1 AUGUSTUS transcript 523710 524393 0.73 + . g85.t1 Scaffold_1 AUGUSTUS start_codon 523710 523712 . + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_1 AUGUSTUS CDS 523710 524393 0.73 + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_1 AUGUSTUS stop_codon 524391 524393 . + 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MSVLNKAEIHAPIQSKLLGVAKDMEERLRPIFFQLQLERDEKRTLQEKVNLWQHRVTQVEASEVEVARLKKELERAKR # ANQGMAAENCRLTKRLEAEVTESEKLRKDVIDERRLNKERDELVQQLERELENAGKLVRYKRPRFSRSLISEQAGLTNKKLKVLARSSNRMPFANSAD # DSLIVEPAVLECSSSVSLHGNDHHQLHKGHSMKWESFLKVVNLVLMDSDSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 Scaffold_1 AUGUSTUS gene 525852 526959 0.89 - . g86 Scaffold_1 AUGUSTUS transcript 525852 526959 0.89 - . g86.t1 Scaffold_1 AUGUSTUS stop_codon 525852 525854 . - 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_1 AUGUSTUS CDS 525852 526743 0.89 - 1 transcript_id "g86.t1"; gene_id "g86"; Scaffold_1 AUGUSTUS CDS 526826 526959 0.96 - 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_1 AUGUSTUS start_codon 526957 526959 . - 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MSEVQEFDAIIVGAGFAGVHQLIQFRKLGLKVRLLEAGGGLGGTWVDSENPIYQFSDPELYKDWNYTEKFPGWREIQQ # YFEYVDKKLDLSRDVSYNSRVVSAVWDDTTDRWTLTTEAGDVYRVQWLSLCTGIGSKYYIPPYKGLDSFKGEVHHTSRWPTDYDLKGKKVGVIGTGST # GVQFIQEIAPVVEHLTVFQRTPNLSLPMKQTKLDLEEQKKLKEYLYPIQFGRRNQTFSGYLHDLDMKPTLEATLEERVLNYEDKWEKGGFHFWIGSYG # DIFFNQDANDVAYAFWRDKTRARINDPEMKDKLAPMKSPHPFGVKRPSLEQVSSNFSIYENMILTGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 Scaffold_1 AUGUSTUS gene 528475 528954 0.72 - . g87 Scaffold_1 AUGUSTUS transcript 528475 528954 0.72 - . g87.t1 Scaffold_1 AUGUSTUS stop_codon 528475 528477 . - 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_1 AUGUSTUS CDS 528475 528954 0.72 - 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_1 AUGUSTUS start_codon 528952 528954 . - 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MVDNGVLRLNEAQQVHEMLNQNLGINLTVVDASDLFLSRLQDVEDPEKKRKIIGNTFINVFEEEATKIEAAANEEEKQ # GAEAKGRIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKDMKLKLIEPLRELFKGIVGSLPSDQHIKNADIDFPVF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 Scaffold_1 AUGUSTUS gene 535946 536362 0.45 + . g88 Scaffold_1 AUGUSTUS transcript 535946 536362 0.45 + . g88.t1 Scaffold_1 AUGUSTUS start_codon 535946 535948 . + 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_1 AUGUSTUS CDS 535946 536362 0.45 + 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_1 AUGUSTUS stop_codon 536360 536362 . + 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MINGGSTHFISATPYQVHVSAAKAAVDALSNVLAVEEGPHGVRSNVIAPGFIAGTEGFDRLSNKDDQSHGFSAPLGRF # GDVKDVANAAVFLFSDAASYVTGQVIPVDGGSEHLRSTFFPYPQSVLDPTSMQKLMKGKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 Scaffold_1 AUGUSTUS gene 537947 538471 0.88 + . g89 Scaffold_1 AUGUSTUS transcript 537947 538471 0.88 + . g89.t1 Scaffold_1 AUGUSTUS start_codon 537947 537949 . + 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_1 AUGUSTUS CDS 537947 538471 0.88 + 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_1 AUGUSTUS stop_codon 538469 538471 . + 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MELQLVYRILRKISDWAVTGYYSEILIDGPENVLNVQQGVDGKGAKRTNGPVILCSSHHNEMIDIATLAMTMPKCQGE # RRHVSFWAKDSMFKNTVGGWVMRSSGAIPVKRNPNKSESAELNRKGKLGKDNRSESLFASTTGTLALGKVVGVFPEGTSLPNRESSKSCLVRQGLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 Scaffold_1 AUGUSTUS gene 549893 550513 0.42 + . g90 Scaffold_1 AUGUSTUS transcript 549893 550513 0.42 + . g90.t1 Scaffold_1 AUGUSTUS start_codon 549893 549895 . + 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_1 AUGUSTUS CDS 549893 550513 0.42 + 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_1 AUGUSTUS stop_codon 550511 550513 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MEETHVAVSPSKKRPFLQFRSKSSRTIPTSSSHPPSSSLDLPRPNFLGEIKSISSPVTVELGHASSPSIATNASWEHI # QGSTSLDLLRSTDNPPVNTFLHGKHSPAPGIPFPSQRESRGGSLFLKLSTAVARPFSAGSIHPDLDACSSAASSTTNSIRRTQSRPPEATEALKVTPL # RTNFPSSFSSPSSPIGANPTTRALAAMEVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g90 ### # start gene g91 Scaffold_1 AUGUSTUS gene 551429 552178 0.93 + . g91 Scaffold_1 AUGUSTUS transcript 551429 552178 0.93 + . g91.t1 Scaffold_1 AUGUSTUS start_codon 551429 551431 . + 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_1 AUGUSTUS CDS 551429 552178 0.93 + 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_1 AUGUSTUS stop_codon 552176 552178 . + 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MFSPTPTSFPTYPTPTVEIIDGKILALPPETTSTVTEFVTAIVTVLPISTSTSTVEVVVTDTVTPSTAVPATTTVDIV # TVTVVPSPSKPTTWTAPAQMTDLSAFNITNFAGGSQNLRIVDNLSTNSSTELSNSSAPTEVVTFEVSSDHSSNNDSSTVWTNATSALQILYPENSIDP # ARKPQGGAEFYAAPLELKNAKNVTLEYSVFFPQAFDWVLGGKLPGLYGGRQGCSGGDAAVDCFSTRLMWRKMV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 Scaffold_1 AUGUSTUS gene 553909 554307 0.39 - . g92 Scaffold_1 AUGUSTUS transcript 553909 554307 0.39 - . g92.t1 Scaffold_1 AUGUSTUS stop_codon 553909 553911 . - 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_1 AUGUSTUS CDS 553909 554307 0.39 - 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_1 AUGUSTUS start_codon 554305 554307 . - 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MSMVGYQGLCAGIPSSRVLSRNSFEDIFAEVERPVLQSIPLKSDAVTDVNCVFRRRCVHCRRISKISRRISSGTGTTS # RGVNHPSIVDTFMTGELVGGIPDFDFIHSVAQRQRGCRDSTGQEAGPEEDEQAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g92 ### # start gene g93 Scaffold_1 AUGUSTUS gene 555132 555858 0.78 - . g93 Scaffold_1 AUGUSTUS transcript 555132 555858 0.78 - . g93.t1 Scaffold_1 AUGUSTUS stop_codon 555132 555134 . - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_1 AUGUSTUS CDS 555132 555622 1 - 2 transcript_id "g93.t1"; gene_id "g93"; Scaffold_1 AUGUSTUS CDS 555681 555858 0.78 - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_1 AUGUSTUS start_codon 555856 555858 . - 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MSSFDSDPNNFDNTNNESQNRRREFTGQPGGGYDQQASRFDNSNSMGGGGFDQQTPGHDQFSASGYNDDSFGPQSQSQ # TGRSEFKNERSYGGDSYGQSPSLILTHSPRSNQSLLPKGAGNGTESNRSTGYGTGNDFSGDRNDDSSYGSGNNNSNNKPSFGDKMKGTCSFLHQTAKF # LCAHDFVLLGTAEVAAGKMTKNPGMVERGQDRKVCYPSIALTQEFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g93 ### # start gene g94 Scaffold_1 AUGUSTUS gene 556305 557037 0.25 - . g94 Scaffold_1 AUGUSTUS transcript 556305 557037 0.25 - . g94.t1 Scaffold_1 AUGUSTUS stop_codon 556305 556307 . - 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_1 AUGUSTUS CDS 556305 556594 0.33 - 2 transcript_id "g94.t1"; gene_id "g94"; Scaffold_1 AUGUSTUS CDS 556669 556812 0.65 - 2 transcript_id "g94.t1"; gene_id "g94"; Scaffold_1 AUGUSTUS CDS 556872 557037 0.59 - 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_1 AUGUSTUS start_codon 557035 557037 . - 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MASFDSNSNDNFDSTGRDSQNRQVQFDQSDTVGSGMAGVGAGGYNDQQNQTSGRDQFSSSANNDDSFGADSQTGQGYG # ASTNQSDFAQSYGDTTGSQQGSQGTGNGNGSVNEFENNNHSAGNYGSGNDNTSSGYGTSDDFSGNRNDNSYGSENTKPSFGDKVKGTFIPSCIHSNTN # DLSLFFQVLLKLQLVKSQGTVAW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g94 ### # start gene g95 Scaffold_1 AUGUSTUS gene 563196 564547 0.47 + . g95 Scaffold_1 AUGUSTUS transcript 563196 564547 0.47 + . g95.t1 Scaffold_1 AUGUSTUS start_codon 563196 563198 . + 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_1 AUGUSTUS CDS 563196 563449 0.9 + 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_1 AUGUSTUS CDS 563971 564547 0.54 + 1 transcript_id "g95.t1"; gene_id "g95"; Scaffold_1 AUGUSTUS stop_codon 564545 564547 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MLFTVPSPSLPCTARLSPTTPDHSNTSNPIGKFLDIEAAASDADSNGEYDTSVNKYEVDSVIVADEAGDGSPIEWSPS # PSRGHVFNAPMSPLPPSKLISNCPSCRTYYASDDPVFTDLVSFPSSSQRHGSVQHPGAANTVSSHLDPTSPRPFPISSNSVDADVGLQVDDDSSSYCY # PPEEPTIPTSAPTLSSALSADEYDDMDIDSAADFRSSEHCELLHLIYHLTVRRLVAYSSLTSLPRFCVKEKGRNLMGTPTNQSNTQYASSLLSNLFNS # KG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 Scaffold_1 AUGUSTUS gene 567245 567950 0.25 + . g96 Scaffold_1 AUGUSTUS transcript 567245 567950 0.25 + . g96.t1 Scaffold_1 AUGUSTUS start_codon 567245 567247 . + 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_1 AUGUSTUS CDS 567245 567455 0.35 + 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_1 AUGUSTUS CDS 567514 567950 0.7 + 2 transcript_id "g96.t1"; gene_id "g96"; Scaffold_1 AUGUSTUS stop_codon 567948 567950 . + 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MMRLAPSKDLDVFASLRGKVSPAVTSKITTPSPPLEIKPSTPAPKAPVAPPRLIRRNRELENLKTDASSFLASPRSAR # SKDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRSRKVAPAASKGKARQIVVTDEDSASNEVESED # EDEEEDSAPPPKRLKTTSSISGKVYSSFISFYFTNLMGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 Scaffold_1 AUGUSTUS gene 568862 569206 0.46 + . g97 Scaffold_1 AUGUSTUS transcript 568862 569206 0.46 + . g97.t1 Scaffold_1 AUGUSTUS start_codon 568862 568864 . + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_1 AUGUSTUS CDS 568862 569206 0.46 + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_1 AUGUSTUS stop_codon 569204 569206 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MATLFRWPSPFNLSGLDFDNRTPGEWIDLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGAS # SQVGGSIPMELDLPAIESLAEPALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 Scaffold_1 AUGUSTUS gene 571205 571727 0.12 + . g98 Scaffold_1 AUGUSTUS transcript 571205 571727 0.12 + . g98.t1 Scaffold_1 AUGUSTUS start_codon 571205 571207 . + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_1 AUGUSTUS CDS 571205 571219 0.12 + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_1 AUGUSTUS CDS 571311 571727 0.19 + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_1 AUGUSTUS stop_codon 571725 571727 . + 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MFLLTQAYQSCSCSSRIFNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQ # DSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g98 ### # start gene g99 Scaffold_1 AUGUSTUS gene 571988 572671 0.65 - . g99 Scaffold_1 AUGUSTUS transcript 571988 572671 0.65 - . g99.t1 Scaffold_1 AUGUSTUS stop_codon 571988 571990 . - 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_1 AUGUSTUS CDS 571988 572671 0.65 - 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_1 AUGUSTUS start_codon 572669 572671 . - 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANK # VAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHEL # IDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g99 ### # start gene g100 Scaffold_1 AUGUSTUS gene 573343 574415 0.37 - . g100 Scaffold_1 AUGUSTUS transcript 573343 574415 0.37 - . g100.t1 Scaffold_1 AUGUSTUS stop_codon 573343 573345 . - 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_1 AUGUSTUS CDS 573343 573857 0.86 - 2 transcript_id "g100.t1"; gene_id "g100"; Scaffold_1 AUGUSTUS CDS 573995 574415 0.38 - 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_1 AUGUSTUS start_codon 574413 574415 . - 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MASCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLA # VDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGE # PINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSS # EGNRLDELIPLIGKYLSNPSDESWVKCQKMNGLNLLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 Scaffold_1 AUGUSTUS gene 575444 576700 0.37 - . g101 Scaffold_1 AUGUSTUS transcript 575444 576700 0.37 - . g101.t1 Scaffold_1 AUGUSTUS stop_codon 575444 575446 . - 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_1 AUGUSTUS CDS 575444 575921 1 - 1 transcript_id "g101.t1"; gene_id "g101"; Scaffold_1 AUGUSTUS CDS 575977 576253 0.54 - 2 transcript_id "g101.t1"; gene_id "g101"; Scaffold_1 AUGUSTUS CDS 576328 576700 0.69 - 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_1 AUGUSTUS start_codon 576698 576700 . - 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTV # GTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDLKGNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQ # VFCVWRDGVLGEFDDQLNNDQFNLNPIKSFFLQNGGSSLNPLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTES # FQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKR # LTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g101 ### # start gene g102 Scaffold_1 AUGUSTUS gene 577083 577757 0.49 - . g102 Scaffold_1 AUGUSTUS transcript 577083 577757 0.49 - . g102.t1 Scaffold_1 AUGUSTUS stop_codon 577083 577085 . - 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_1 AUGUSTUS CDS 577083 577757 0.49 - 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_1 AUGUSTUS start_codon 577755 577757 . - 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKLLCARYAIGESVQGLKRITTYQLYPKMEKLKFWTIHLGYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 Scaffold_1 AUGUSTUS gene 577787 578107 0.4 - . g103 Scaffold_1 AUGUSTUS transcript 577787 578107 0.4 - . g103.t1 Scaffold_1 AUGUSTUS stop_codon 577787 577789 . - 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_1 AUGUSTUS CDS 577787 578107 0.4 - 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_1 AUGUSTUS start_codon 578105 578107 . - 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEE # LSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 Scaffold_1 AUGUSTUS gene 578418 579312 0.57 - . g104 Scaffold_1 AUGUSTUS transcript 578418 579312 0.57 - . g104.t1 Scaffold_1 AUGUSTUS stop_codon 578418 578420 . - 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_1 AUGUSTUS CDS 578418 578773 0.66 - 2 transcript_id "g104.t1"; gene_id "g104"; Scaffold_1 AUGUSTUS CDS 578835 579312 0.64 - 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_1 AUGUSTUS start_codon 579310 579312 . - 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNKTVVKDVSVTSMSDRRK # EDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTKNNSK # WLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 Scaffold_1 AUGUSTUS gene 581775 582848 1 + . g105 Scaffold_1 AUGUSTUS transcript 581775 582848 1 + . g105.t1 Scaffold_1 AUGUSTUS start_codon 581775 581777 . + 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_1 AUGUSTUS CDS 581775 582848 1 + 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_1 AUGUSTUS stop_codon 582846 582848 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKGWETPFRTGLPETE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 Scaffold_1 AUGUSTUS gene 584637 585482 0.37 + . g106 Scaffold_1 AUGUSTUS transcript 584637 585482 0.37 + . g106.t1 Scaffold_1 AUGUSTUS start_codon 584637 584639 . + 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_1 AUGUSTUS CDS 584637 585482 0.37 + 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_1 AUGUSTUS stop_codon 585480 585482 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGY # LPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKVGPLDYR # LDLPLSLDRLHPVFHVDKLYPWKGNPINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAPNLSRAPKIVRAFHKK # HPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # start gene g107 Scaffold_1 AUGUSTUS gene 592625 593469 0.38 + . g107 Scaffold_1 AUGUSTUS transcript 592625 593469 0.38 + . g107.t1 Scaffold_1 AUGUSTUS start_codon 592625 592627 . + 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_1 AUGUSTUS CDS 592625 592855 0.44 + 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_1 AUGUSTUS CDS 592908 593179 0.6 + 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_1 AUGUSTUS CDS 593247 593469 0.78 + 1 transcript_id "g107.t1"; gene_id "g107"; Scaffold_1 AUGUSTUS stop_codon 593467 593469 . + 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MVLFDAFSNSCLKRMIFNFNHGTEVAALQRQGRVGGDMIPFGTRVPKGGAPADGLRPFEGINATTTSGVDEFFAQAEN # AMAYDKVAKYLDPDLYHEIQRRTIDSEKLGRIGGTVYSCHNYMAIQHLENTDACRSFCSQLELIRNHQYEMAFVYSQMGYWIETESNTFCLVHGTMLP # AEKTAAQMRTRTRLRDGQPAGGGGDVPVSNGQHKPTRERDNRRAAEHVRIQREREQRDAYWNIAE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 Scaffold_1 AUGUSTUS gene 596354 597867 0.12 + . g108 Scaffold_1 AUGUSTUS transcript 596354 597867 0.12 + . g108.t1 Scaffold_1 AUGUSTUS start_codon 596354 596356 . + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 596354 596391 0.47 + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 596456 596661 0.49 + 1 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 596775 596962 0.28 + 2 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 597073 597087 0.79 + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 597161 597187 0.84 + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS CDS 597247 597867 0.97 + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_1 AUGUSTUS stop_codon 597865 597867 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MLADNVELKIQANTNDDEELDELGMDEFSECVKFLRPFIIRLNFHSDELRGPAQAFDFGSDAEDDEPEVIIGKSKKSK # QSEQQAAAEDALDVEEMQQAAFNEEDDDDDLDMDEDEEETDGEPFRLPTREENEAESKAGGPDVHVISKFTLFQLFPVAEAIEFFEANEVPRPVTIRT # NTLRTRRRDLAQALINRGVNLEPIGKWTNVGLQVFESSVPIGKCAELSCKCIIEHSLGATPEYLAGHYMLQAASSFLPVIALSPQPNERVLDMASAPG # GKTTHIAALLQNTGIVFANDANKARTKSLSANVHRLGCKNVVVCSYDGREFPKVIGGFDRVLLDAPCSGTGVISKDSSVKVNKVCTYFPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 Scaffold_1 AUGUSTUS gene 598195 598392 0.98 + . g109 Scaffold_1 AUGUSTUS transcript 598195 598392 0.98 + . g109.t1 Scaffold_1 AUGUSTUS start_codon 598195 598197 . + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_1 AUGUSTUS CDS 598195 598392 0.98 + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_1 AUGUSTUS stop_codon 598390 598392 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MDGFYVAKFKVEKRGKISKASDSTAEVGLTGIEEEGEQIASEKEKIAFDDDEDRPYIEGMPSLHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 Scaffold_1 AUGUSTUS gene 600591 601835 0.64 + . g110 Scaffold_1 AUGUSTUS transcript 600591 601835 0.64 + . g110.t1 Scaffold_1 AUGUSTUS start_codon 600591 600593 . + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_1 AUGUSTUS CDS 600591 600749 0.82 + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_1 AUGUSTUS CDS 600798 600977 0.87 + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_1 AUGUSTUS CDS 601029 601205 0.95 + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_1 AUGUSTUS CDS 601551 601835 1 + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_1 AUGUSTUS stop_codon 601833 601835 . + 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MSAMETVAAPVALVEEVKPIESTTEPAAPVETTPAPAEDAPKAEEATTVRLIFVEAKAEVRVFRILRACYLTYSVQET # HAAAAEEPVASTEPASEAAPAEETTKDAAKDEAKPAEESSKKEDAPKSPTLLAKLLAPFKSDKHKAEKKVKAAKSPKKEKKKEEKKEEKKETSEKEEK # VAKPTKVGRRLSARVGDFFKPKPKSEVSTPAKVDEHPPKIEEPTPVAPLENPASEPTTEAPAATAEATEEAVADKPTETSEAAPVVAAAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 Scaffold_1 AUGUSTUS gene 602658 605068 0.1 + . g111 Scaffold_1 AUGUSTUS transcript 602658 605068 0.1 + . g111.t1 Scaffold_1 AUGUSTUS start_codon 602658 602660 . + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_1 AUGUSTUS CDS 602658 602911 0.55 + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_1 AUGUSTUS CDS 603609 604178 0.56 + 1 transcript_id "g111.t1"; gene_id "g111"; Scaffold_1 AUGUSTUS CDS 604231 604660 0.57 + 1 transcript_id "g111.t1"; gene_id "g111"; Scaffold_1 AUGUSTUS CDS 604739 605068 0.99 + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_1 AUGUSTUS stop_codon 605066 605068 . + 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MVKTRLRYQNCTYSNCKRDVLPGDAMRDIYTRGLVTGDFVLVMGDLVSNIRIDEVVKVHKERRKTNKDAIMTMVVKES # GAKHRTRTSTVGNKCLIGSSTRVSDNAQIISSVVGRDCFIGAGAIIDNSYIFSGTRIGPGCVIERSIIGSNVDIKENTRIDRGSLVGDGVIIGPNAHL # KAFGRLSKKRETKTTGDESDADEYADSEEEEVESGNRFLIRFSGSSTLIQIHLPAQDSITVDLGTASNAIVWPPNAPDEDEDSEDVENVKNQRFMRLG # SASDLAFSDPGSESSGEESESSDEDSDFDRHLDNLPTSSATSLSLDPNGSSTDAIAESEFRNEVRLSLERAFTEGHSVDNAAVELKTLRMASNVPLSR # VRESVVSAIVEKIKIIDGGGVTQRQEIANVVSRWGPLINKIGGVDMTHCASSERLPLFGQILAALYQDDIIEEDDIREWHQAATSQGLGLSPSVRTDN # IKRCWEIGSHMIQQFDEQADDSENDSEEEEGEGTEDEDEEGDNSVDEDDEEEDEEDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 Scaffold_1 AUGUSTUS gene 606775 607263 1 - . g112 Scaffold_1 AUGUSTUS transcript 606775 607263 1 - . g112.t1 Scaffold_1 AUGUSTUS stop_codon 606775 606777 . - 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_1 AUGUSTUS CDS 606775 607263 1 - 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_1 AUGUSTUS start_codon 607261 607263 . - 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MPSQFSPVEGAGGFQQSNPSILAIASLLGSLQTFKKAGMMAPLRKQSILLTNYLEKLLFQSKYFVPLEEVSTKYKEGK # GPPGFTIITPRDTKDRGAQLSLLFLPSGTGVMQKIFESLQSHGVIGDERQPDVIRLAPIHLYNNEADCEAAAQYLNRAFDEFEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 Scaffold_1 AUGUSTUS gene 613342 613937 0.52 + . g113 Scaffold_1 AUGUSTUS transcript 613342 613937 0.52 + . g113.t1 Scaffold_1 AUGUSTUS start_codon 613342 613344 . + 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_1 AUGUSTUS CDS 613342 613389 0.52 + 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_1 AUGUSTUS CDS 613461 613937 0.99 + 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_1 AUGUSTUS stop_codon 613935 613937 . + 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MSDTILLVKETRTCAYAQIRCREIVHTQSEEFHDVPETDYPQKIPRIKKALPPKSAEKFEKSSGGVSTESILLKTLEA # FFGENSNGQVVVQQVTDDGEMVIEFLDDLSDDGDDGEDVADKITNVLRAAGYNIKGEERNKQTTPGDSDKKRQDRSSDSSSSEKQAALQEQVRDEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 Scaffold_1 AUGUSTUS gene 615182 616906 0.79 - . g114 Scaffold_1 AUGUSTUS transcript 615182 616906 0.79 - . g114.t1 Scaffold_1 AUGUSTUS stop_codon 615182 615184 . - 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_1 AUGUSTUS CDS 615182 616906 0.79 - 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_1 AUGUSTUS start_codon 616904 616906 . - 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MTTDNVVKLIDFGTATVFHYPGKTTHTKAKGVVGSDPYLAPEVLADEEYDPRKTDVWSVAVIFLCMVLRRFPWKSPDV # KNDASFRAFVNAHPDLSVPKTTKPKALTSTSQVELGLGQTIKKPPIPIRHSTMPSEMKIAAASPRKDLLNSIEVDQNLASPTASSYRVPSPSSSSFSS # DYDDDDESERSDSQLSHTPSVVSKQRNSERQFALATSPRISRSTATLPAFVLGAIQNDLYNELSIAGEVDMDPSVRRFGRPGNSTESLPVSASRTFGI # TNGIFNGGINTAPATPGSTVPPPASPIGLLSAPYMSEDELPTPKVANGIIPLPPASALSSRTVRARSATLNSIGGPELLASMKEDHSVSNGIPTTSPM # ASAPINSPTSDMIPNITISEREPETPKELPAPEQTTRRRQRSDSVTTFHGGGAESIFRLLPRETRPALRRMLHVEPGARCTLTDLLKGRGKHGNLLCG # CQAGFPHLNIDGSISTLTGTTIGGGKEPGLNGSVNGDSGTNSSTSTLSTVHQPYCVDHDCEPEEEDNGDPWLTSIIPCSTLGVKPDHVHIKVAIDEKA # GKRKLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 Scaffold_1 AUGUSTUS gene 623615 624069 0.35 - . g115 Scaffold_1 AUGUSTUS transcript 623615 624069 0.35 - . g115.t1 Scaffold_1 AUGUSTUS stop_codon 623615 623617 . - 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_1 AUGUSTUS CDS 623615 623889 0.35 - 2 transcript_id "g115.t1"; gene_id "g115"; Scaffold_1 AUGUSTUS CDS 624051 624069 0.96 - 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_1 AUGUSTUS start_codon 624067 624069 . - 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MGSIVDPSCLLAVNAQGNIDWIVHDVKDSSIQETLLQKGLLNTDVEIVALQEGQFIMPGFVDTHTVCDIYFSGSLNRT # DPRISMLLKYPILERESTP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 Scaffold_1 AUGUSTUS gene 641886 644194 0.84 - . g116 Scaffold_1 AUGUSTUS transcript 641886 644194 0.84 - . g116.t1 Scaffold_1 AUGUSTUS stop_codon 641886 641888 . - 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_1 AUGUSTUS CDS 641886 642487 0.94 - 2 transcript_id "g116.t1"; gene_id "g116"; Scaffold_1 AUGUSTUS CDS 642544 644194 0.84 - 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_1 AUGUSTUS start_codon 644192 644194 . - 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MVAEIEVMVRGIEDEKVEWEDREKTRDVLGRIEWGEGNGSGSGGSGKEWVGRPKPGRVLVEESVYLPPSPIPPPPTSS # SSSSASPLSPIQIKKSKSSFRRLSDALSSSNPSSPSSSSNQGTQSNKPVKAFSKKDLWVVHFNDVVLLCQRTGLTTVPIWSSGGNGSGSGGGSGNGLE # RLNKGKDPPGGGLGPGRRQLRVTPRNLYKFIKVETWVIGDVVQPREGVVAMADIERARLQQQQQQQLPPQQQQSYPSKQRSNHNHNHNSLHPSTQPRI # IPMPPDDENLPRLRPNHLNSNSDPDDSDPDSSDSDRKSKMSFSYWGADKVTIQRPPRTTTNTNPNTNNTPGSGSGSGMTKVIIRGGRGTGVGGSAGSG # TGRMRVVGLGTRSLTSSSTGSGSGSGAGTPSYRSGVGVPGGGGGGAPQGRIVVPSRRGGGGTGGGHGHGHGHLGHGHGHLGGGYGVGVHGHVIPPSAY # SRESSANAKFGSRLVSERDRGERERDREKDRDRDRDRDRERDRDRDRERDRDRGDKEKDKDKDKEKDKDKDKEKERPSSRPKATVTRSPAGASTPVTA # SASSTASASASSSTPTPSSNSNPNSNSNPNTLPPPPRITPSTSQTSARSRRSSTTTATTTTTPVPVPVPVPVPVPTSTPTVQGSAKSKPTTTGGERGE # RGTGTGGAISRGPSNTGPSASTPGNARGSSSTTSTASTTGTTGTTPKATTGTTPVSPAASEDSGVGLYRQMMAKERRGRGGGCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # start gene g117 Scaffold_1 AUGUSTUS gene 645906 646328 0.84 - . g117 Scaffold_1 AUGUSTUS transcript 645906 646328 0.84 - . g117.t1 Scaffold_1 AUGUSTUS stop_codon 645906 645908 . - 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_1 AUGUSTUS CDS 645906 646328 0.84 - 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_1 AUGUSTUS start_codon 646326 646328 . - 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MKAFFSRLHLGSNNTTNTSNPNSTSNNPNSTNGSNTLGGNFSNNFSGTLGNTFGTNSANASREKEIGKLPASLRTWPP # QPVPVPSPSPSPSTTPASLPPHPLPASVPAAPVRTESRESGRRTSQYAVYKPLPEVLGWEVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g117 ### # start gene g118 Scaffold_1 AUGUSTUS gene 654098 655014 0.35 + . g118 Scaffold_1 AUGUSTUS transcript 654098 655014 0.35 + . g118.t1 Scaffold_1 AUGUSTUS start_codon 654098 654100 . + 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_1 AUGUSTUS CDS 654098 654562 0.78 + 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_1 AUGUSTUS CDS 654613 655014 0.43 + 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_1 AUGUSTUS stop_codon 655012 655014 . + 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MAIKRARDIGVRATAEVIRTLEPAGHISELDSDDELDPPTKRTRAMSPVDDVENGSKAPTPPPPSPPMDFEVPGTASF # DPDELMNFDLDREILAITGFMDTMGSVPSSDLDHMGYTNAPSSVAVAKTCKSAFEPDLLSHLYNYRIDAKYISNEHFRNQPKWWMNDSGCSEHTTFDL # SDFIEYEDLEEKVLIATATTTAYITGVGTVLINFKDVRGRMHSARIAPVFYMKELSHRLIAQGHFLQDGKTVRGNADKVDFWDKDGLFLSFEPRTHSN # TIYISKIIRHSLWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g118 ### # start gene g119 Scaffold_1 AUGUSTUS gene 655047 656482 0.08 + . g119 Scaffold_1 AUGUSTUS transcript 655047 656482 0.08 + . g119.t1 Scaffold_1 AUGUSTUS start_codon 655047 655049 . + 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_1 AUGUSTUS CDS 655047 655655 0.11 + 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_1 AUGUSTUS CDS 656147 656482 0.24 + 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_1 AUGUSTUS stop_codon 656480 656482 . + 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MHRRMGHPSREALTQLRKHAEGVPTFSIPHEEDLCEGCAKGKMTLRPFPPTNRRASRPFEIIHSDLKEWPTISYHKYK # YTIFFIDDYTSHGFYCHLKKKSGALPVIKQFIATVKNLYETNVKEWMSDGGGEFRSNALDEFFKNEGIKAQWSSPHITSRMEEPKGLSGLLLRKVNHS # AFKPVFLIPGGNSLLHTLCMCITALLCLRRSGRVRKPPTRLTGDPRSSTKLPAEQQVERPKRDIQRRAPQPGSSSAEQERPEPEQVPGPSTEHPTPEN # GEQPSVTPGDEANTLIRLCREGGAELIYFLMAKAVPFEGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 Scaffold_1 AUGUSTUS gene 657799 658637 0.39 + . g120 Scaffold_1 AUGUSTUS transcript 657799 658637 0.39 + . g120.t1 Scaffold_1 AUGUSTUS start_codon 657799 657801 . + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_1 AUGUSTUS CDS 657799 658051 0.93 + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_1 AUGUSTUS CDS 658120 658637 0.41 + 2 transcript_id "g120.t1"; gene_id "g120"; Scaffold_1 AUGUSTUS stop_codon 658635 658637 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQLSTALYTGDGQPV # QVLTPRPRRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGLVVPAVPAAGSWWTWWTSFSNSP # DIPNEQRAMLELLSGSRVPLRPLVPSSPLSAVPLTALNPRARSRSQRYSTVRIPENSRRSSSISPWSSMTVPSTSPTNGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 Scaffold_1 AUGUSTUS gene 662251 663246 0.17 + . g121 Scaffold_1 AUGUSTUS transcript 662251 663246 0.17 + . g121.t1 Scaffold_1 AUGUSTUS start_codon 662251 662253 . + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_1 AUGUSTUS CDS 662251 662439 0.39 + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_1 AUGUSTUS CDS 662555 662859 0.28 + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_1 AUGUSTUS CDS 662934 663246 0.72 + 1 transcript_id "g121.t1"; gene_id "g121"; Scaffold_1 AUGUSTUS stop_codon 663244 663246 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MDFIEQLPMSNGFTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSIVTLEQYIRIYCSYQQD # DWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEKISWSFQGHQS # TWYFVLRAQAPRLSSPHSSGFPRLTAGAGYAESFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDDSLGCC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g121 ### # start gene g122 Scaffold_1 AUGUSTUS gene 665546 666490 0.56 + . g122 Scaffold_1 AUGUSTUS transcript 665546 666490 0.56 + . g122.t1 Scaffold_1 AUGUSTUS start_codon 665546 665548 . + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_1 AUGUSTUS CDS 665546 666490 0.56 + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_1 AUGUSTUS stop_codon 666488 666490 . + 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MAKKIYIDQCAYLDKVLKRCGMENAKMADTPLPAGFQPEPTIGQSNSALRSKFQMVIGSLLYLMLGTRPDISFAVTKL # AQHAANPSQEHLNKALYICRYLLGTRSYALCYDGESGIGLSAWTDSDWASDPYTRRSQTGFFMKLANGIFSWTSHAQKTIAHSSTEAEYMALSDCSRQ # VVWIRNLLEELGYKLDAIPIAGDNQGSIFMASNPVTSKHSKHIDIRYHYIREVVERGLVQVFFVDGSNNPADLFTKNLGRIKFELFAQCLDLSSTRPP # ILRLSVLSDAYRYCFEQSTLLCCSARGCVERGYAVHMPLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g122 ### # start gene g123 Scaffold_1 AUGUSTUS gene 670028 670417 0.76 + . g123 Scaffold_1 AUGUSTUS transcript 670028 670417 0.76 + . g123.t1 Scaffold_1 AUGUSTUS start_codon 670028 670030 . + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_1 AUGUSTUS CDS 670028 670162 0.76 + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_1 AUGUSTUS CDS 670244 670417 0.98 + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_1 AUGUSTUS stop_codon 670415 670417 . + 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MHAADIKGSIAYAKGLKRVGILTEDEEAKMIAGLEAVGKEWEDGTFEPAPDDEDIHTANERRLVSSLVLSEESYTPDD # RETTKSLLTCGYGSSKRSRTSKTD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g123 ### # start gene g124 Scaffold_1 AUGUSTUS gene 671006 671332 0.99 + . g124 Scaffold_1 AUGUSTUS transcript 671006 671332 0.99 + . g124.t1 Scaffold_1 AUGUSTUS start_codon 671006 671008 . + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_1 AUGUSTUS CDS 671006 671074 0.99 + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_1 AUGUSTUS CDS 671153 671332 0.99 + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_1 AUGUSTUS stop_codon 671330 671332 . + 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MPQKKNPDSLELLRGKSGRVFGNMAGFIMTLKGLPSTYNKDLQEDKEPLFDALVNVSMSFKIAEGVIATLDVSFWFII # DFES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g124 ### # start gene g125 Scaffold_1 AUGUSTUS gene 678413 680080 0.57 + . g125 Scaffold_1 AUGUSTUS transcript 678413 680080 0.57 + . g125.t1 Scaffold_1 AUGUSTUS start_codon 678413 678415 . + 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_1 AUGUSTUS CDS 678413 680080 0.57 + 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_1 AUGUSTUS stop_codon 680078 680080 . + 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MVKEAFSSKLVTIIWWFFTVSVSLITLSSYHNDEYHQRCQLTPGDIVDEDSLNPPEFHDHEGIPTISVQAFTPILGTL # LLSPNVLVGGATRYAVVALLGRIKRVNAMESKPGSDSPNVQIPRLNEVANSQNFSVGSLAEIDDEEEIVIGYFGKEERSLFQKEILFQVVVGMGRLDS # DEPDAESTGERDQHAIGSSPSDSGAAWQTHTGRTDLEPQIDIVIDEAEAPTQQPPQGFQIISPQREAPDTELALSQVDAKAISQTNNPYFPPLPSSGF # THIKVTSSGSPMSTSSSGSSSSTPSSTTDTSASGSESSFSPHSNISPRISTSSPSPNSSSSSTARASSSPSMSPPPPFPTGTDTTPFARPASPSSRRS # DFDMFSSGSTADPFNSNSPVTLASPSVASAFPIATTDLTPQNGLSPPSSYRPDIHAFPHESNWPPSPSRFQRQDTNAFGANISADVSMSSPSINSDIQ # SYDELDEEGEYDQATIGRLSSMSLVAAVAASGRQYYINLFIFQEKLFLQDIWMISQPIFSCPRLRVFPRILSTGFAGKRALLLEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g125 ### # start gene g126 Scaffold_1 AUGUSTUS gene 680319 681185 0.44 + . g126 Scaffold_1 AUGUSTUS transcript 680319 681185 0.44 + . g126.t1 Scaffold_1 AUGUSTUS start_codon 680319 680321 . + 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_1 AUGUSTUS CDS 680319 681185 0.44 + 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_1 AUGUSTUS stop_codon 681183 681185 . + 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MDESADVRAGVLEALGEVIYTFHEEDKLKIDHNFADTEMKESQTPPEELLKMFLGRTQDRRIIDGQQPLAFEEEERVK # PVRRIVDKQKASEAFYTDPNRPLICAFNFPAVALTVGRTRWASTLRDTYLWLAESSIPGVKRTLAASLGEMAKIIGEDHAQQDLLPVWGNAFRVPEDD # VRLKLIDCLAPFIVALPRNGRLEVFNALLDAWSSGAFTSWREREGIAKSLNDLLSVGGLEVTQVVANLLMYALADTVNTVREAAITNVSFMAIFPTYV # TDSTIKSTSFQVFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g126 ### # start gene g127 Scaffold_1 AUGUSTUS gene 684365 685126 0.9 - . g127 Scaffold_1 AUGUSTUS transcript 684365 685126 0.9 - . g127.t1 Scaffold_1 AUGUSTUS stop_codon 684365 684367 . - 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_1 AUGUSTUS CDS 684365 685012 0.97 - 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_1 AUGUSTUS CDS 685103 685126 0.9 - 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_1 AUGUSTUS start_codon 685124 685126 . - 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MSFIQNLVSHSNLTHLTIRGIFAEGPNELVHLLQCVSSVTSLELEDHILIDDARTIRPVLILLVVPWHSGEEGLRVGD # ISDEDTPRSDEDSDCDPKPQELDYYKTPGEQCLLPRLKDFSLTIRPHRKTLRTLLKVVHSRWIRPETASSSYSVNHQFVVPDTLQMCVCLKKLRVKST # LVTRLPAQVLTERFHGLQKDLEEFKKDGMEIDIEIPEHRLDDPTWRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g127 ### # start gene g128 Scaffold_1 AUGUSTUS gene 692689 695274 0.97 - . g128 Scaffold_1 AUGUSTUS transcript 692689 695274 0.97 - . g128.t1 Scaffold_1 AUGUSTUS stop_codon 692689 692691 . - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_1 AUGUSTUS CDS 692689 695274 0.97 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_1 AUGUSTUS start_codon 695272 695274 . - 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MNPPPPRQKKGGGGGGSSSHHSAPPKTRSLPVLGTTTEAGISAPGAGESISSGPVTRGRSPLRSASSKGVKRPRSTTP # PPAVEGGAAVTVTMPPSDSGPSGISGVSAPQSKKTRTSLRTITKPQPEAQSQSQSQRPQSQRNTSKVNIGGGGVSITTPVTSNQGFVRPISTATPAIS # AQSQNQTSTLTLSEIKSLKSQVDNLIQRDEKSQAVLDQHSAMLDAVLVNMRMLLGDKFVDVNAKGDGSRSPPVQQRKEKGIGEDGNKDGKVSVSAVVQ # DVDQDELDELDELTPIEKLTPTPSNGIGGSTAVNATSTNAIALAASKSPVPPPSGLIGPAVAGSYEPQRVDPPPRLISVPSGRVPVQAPVPIIAAVPA # PIPIRDTIRDVPRDSSRDNAAHIAASVPSPHFTQINNGIHTDKLKLKAKAKNPYPNISPVLSAPVISSTAPHVAHPPPPPRDNPPRAIISSARMVNPP # PNIPAISTLPAISTLPAPAAPLSPASTTSAVDDEEGVDKADGVDGIDRGYIADASHGPTPVVTPALIPRGTNREHRSRSPPRRSRSPLPGRAVRGVHN # SFFTSRHPLASHGSHVSHRSSHASRPSYKPLASHAPRRLSRSPPPPSHIRRPTSLSRSPTPPHIRYGYPDPYRAQQPQQPNDAQPSTQRHHVYSPLPR # SRSRSPYSRSPPPYAHSSLSAHPPNPSSRPSQPPRPLHARDNTDMHIDSLVEPYPDYVYTETRDSRDHVDHDEDRLGRSSRPRTSSPKDVQESRSEDT # EDIRDLNGASDERLGRGGGEGGGGKPDRGNSTGRGDEVDGADAADGGDMELEYPSDDIRDTGIVRDTKDTRDAGDAEHPEDDEDMYYPEEVRYSSSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g128 ### # start gene g129 Scaffold_1 AUGUSTUS gene 701916 702422 0.26 + . g129 Scaffold_1 AUGUSTUS transcript 701916 702422 0.26 + . g129.t1 Scaffold_1 AUGUSTUS start_codon 701916 701918 . + 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_1 AUGUSTUS CDS 701916 702422 0.26 + 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_1 AUGUSTUS stop_codon 702420 702422 . + 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MNTTNMTSKIENVDTVPHVTTVIPTNNTTIRSTYPARRPKPFAALLSNFSSSPLQSEESKQNQPSAYSSLVRKNHILL # DSACTNHIVNDRQFFHTYDVDGAIAVQTANSGLLSSLASGTCYFETQIKGTNDTLILEMNDCLFALDAPVSLISVARCLNMALPSRYYPT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g129 ### # start gene g130 Scaffold_1 AUGUSTUS gene 703890 704426 0.78 + . g130 Scaffold_1 AUGUSTUS transcript 703890 704426 0.78 + . g130.t1 Scaffold_1 AUGUSTUS start_codon 703890 703892 . + 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_1 AUGUSTUS CDS 703890 704426 0.78 + 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_1 AUGUSTUS stop_codon 704424 704426 . + 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MLLRSDANDWIAAEEKEIAGLFELEYLRYTETCPKGKFPIGLKMVYDLKIDGTKKAQLVAQGFTQRPEDYGNVHAPVT # RMVSYRIVMAWTASMNLELYSFDVKQAFLNAPLEEEIYVKQIPGRPFRINPPLYTVYDEHSMVYQASAAWYSTLCNALEDLGFTVVNATMQFHWKMDD # TS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g130 ### # start gene g131 Scaffold_1 AUGUSTUS gene 714682 716004 0.82 + . g131 Scaffold_1 AUGUSTUS transcript 714682 716004 0.82 + . g131.t1 Scaffold_1 AUGUSTUS start_codon 714682 714684 . + 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_1 AUGUSTUS CDS 714682 716004 0.82 + 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_1 AUGUSTUS stop_codon 716002 716004 . + 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MFSFVLLDESVAPSRIIAARDPIGITTLYQGWSSKRPGTVYFASELKALVNDCDKIISFPPGHVYDSQDQSTTRYYTP # SWWNGDLDGDAANIPTTKADLELIRTTLEDAVRKRLMSEVPYGVLLSGGLDSSLIASIAARETEKVAQAQYELRQKKLKELSSGPSTPTLASELSKSN # DLSISSVHLNLIFPATLVAWPQLHSFSIGLENSPDLIAARKAAHFLGTVHHEYVFTVQEGIDAIPEVIYHLETFDVTTVRASTPMYLLSRKIKAMGVK # MVLSGEGSDEILGGWSSINGCTDNLLINSQVISTSTLHRMQNHSIKNALSGSRTSIPPTACELTSKFACVVLDIALIHPVSIPFRSTMAWGLEARVPF # LDKQFLEVAMNVDPKEKMFSKGSSQEVDEDGRPKMEKVEISFHQCYQVSPALYSTFSGKHLTVRQTER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g131 ### # start gene g132 Scaffold_1 AUGUSTUS gene 724191 724733 0.4 + . g132 Scaffold_1 AUGUSTUS transcript 724191 724733 0.4 + . g132.t1 Scaffold_1 AUGUSTUS start_codon 724191 724193 . + 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_1 AUGUSTUS CDS 724191 724733 0.4 + 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_1 AUGUSTUS stop_codon 724731 724733 . + 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MSKTGKGFQIEYPSITLHAVSRGDTPPSIYCQLDESSAKAMEMLVDPEAPKTNGNVKKPSADESDEEDENEEEETQEG # MDMRVLNIVPSRVESRAFDAFSLSFSKTDLNYPVDPIFEALSLCAALHPDPPGSDDEEDFDEAFIDAPDDTFEVFTGTEDEELSEVGRVRGDFINDNR # YAPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g132 ### # start gene g133 Scaffold_1 AUGUSTUS gene 725208 727019 0.62 - . g133 Scaffold_1 AUGUSTUS transcript 725208 727019 0.62 - . g133.t1 Scaffold_1 AUGUSTUS stop_codon 725208 725210 . - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_1 AUGUSTUS CDS 725208 727019 0.62 - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_1 AUGUSTUS start_codon 727017 727019 . - 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MSSTDMDAIRSRYLGVDKKKRKIRKMNDRKFVFDWDAQDDTFANDPPPANRQGAQTMFGRGHLAGMDDIRPTSTQTSS # ITANLADPLERRKALKSGLDERHWSEKPLSELKERDWRIFREDFSISARGGQIPHPLRSWEESEIPKPILDVIATIGYKEPSPIQRQAIPIGLSNRDV # IGIAETGSGKTAAFVIPMLAFISSLPTFTDENRHLGPYALILAPTRELAQQIESESRKFATPLGFKCVSIVGGRAVEEQQFNLREGAEIIIATPGRLK # DVLERHVLVLSQCRYVVMDEADRMVHLGFEADLLFILDRLPRSAMDDGGAVESAFDLTPMDVDSNEYGEGQESEDLSLDSKSKVRNRVTTLFSATMPP # AVERLARKYLKRPAIITIGEAGRAVDTVEQRVEFVHGGEEKKKQKLLEILNTGQWGSPIIVFVNQKKTADLIAKEVGRAGWSTSTLHSGKNQEQREAA # LQALRDGAADILVATDLAGRGIDVQDVTLVINYQMASTIEAYVHRIGRTGRAGKLGTAITLLTNEDDEVMCVSTDFFTRCLCFLTCFSSCRYDLKQEI # SKSPVSKVPPELAKHEAAQHKVSREMKRKREDDVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g133 ### # start gene g134 Scaffold_1 AUGUSTUS gene 727252 727770 0.72 - . g134 Scaffold_1 AUGUSTUS transcript 727252 727770 0.72 - . g134.t1 Scaffold_1 AUGUSTUS stop_codon 727252 727254 . - 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_1 AUGUSTUS CDS 727252 727770 0.72 - 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_1 AUGUSTUS start_codon 727768 727770 . - 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MNWRISSFVSSENGSPLVSEAQESSPAESKYAFGGNSPEKGNVDFGLQYFVKICFKQFSNDSEIAPSSSRSDAMILLG # DKKISAKNAWVRRFLGVSLNLLRIIIMSRTEPVSIESLLKKQKEEKEAAAKVYIVKALRDRSNHPAAKIPVQRGASSTGHCETNTGNQGAETQG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g134 ### # start gene g135 Scaffold_1 AUGUSTUS gene 731509 731832 0.41 + . g135 Scaffold_1 AUGUSTUS transcript 731509 731832 0.41 + . g135.t1 Scaffold_1 AUGUSTUS start_codon 731509 731511 . + 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_1 AUGUSTUS CDS 731509 731832 0.41 + 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_1 AUGUSTUS stop_codon 731830 731832 . + 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MALPQWELTSVKVGYSMRVECLHSSIWLLQAQLRLTSQRLGHLQEKNDSRGSITRRDIATLLQQGNVGLARVKAQNLF # QDDIQGDVFEMLVMHVGVILEHIMELEHK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g135 ### # start gene g136 Scaffold_1 AUGUSTUS gene 734357 736111 0.99 + . g136 Scaffold_1 AUGUSTUS transcript 734357 736111 0.99 + . g136.t1 Scaffold_1 AUGUSTUS start_codon 734357 734359 . + 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_1 AUGUSTUS CDS 734357 736111 0.99 + 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_1 AUGUSTUS stop_codon 736109 736111 . + 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MEPPPSPLERSRSSSPSVPHTPSSPSIVVTESEPPASTSKGWPSSTSLWNYAEKLKESNAAATFSKVSSNWQAKALAS # SWSTRKSDTTENHPVHPHSVDPLRHSDPHQDSWFKSTETRRISVPDPDRSKVYSPPARPAFFKPPRDTMVFHGNGPVVDVPSSPELSPSSEGGLMQKT # RNLQASLAALTRSSETTPVVPATPQPRPKSGPRPLLLGSTSVITPRGERPISRSENSTPLNGPAQWNEVMQTRNKHPIHRDSLSSVSSLSPSDALARN # RSEYDSDSPAPVSRKVALNRKSISPMAPHARTGSIPAGSNVPPVPHFRTGSTSHLSLSSSSGSSAALASPIAVSPLKSPGWGQVYLPDSPPAALNGLH # MRSPSLASSIQTIIPEEHPLEKTQSADEMPLEPPLQSRKLMRKKTPPPPGDTSDSSVPEIPRRNNRVRTKRNVRPPNLRLQQQPTDDSPERIITASPN # SLAVEWPHDEQELATTPKASSFSDVNNSTSPRSARKVRKVSAEGRSPTRQRKTSGEGQESRPRKISTEARTRKASDVKKYRDSTADMGDDEGYDELLS # AYSESEGSSRPILSDN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g136 ### # start gene g137 Scaffold_1 AUGUSTUS gene 737651 738172 0.49 - . g137 Scaffold_1 AUGUSTUS transcript 737651 738172 0.49 - . g137.t1 Scaffold_1 AUGUSTUS stop_codon 737651 737653 . - 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_1 AUGUSTUS CDS 737651 738172 0.49 - 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_1 AUGUSTUS start_codon 738170 738172 . - 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MNRKIVLSLPTSASTAYLMSLTILLNLRLDTLATNVVRSACSLPDFPVYLHDAFDLDRFKDYVSAKVPDFSIQDHHSY # YVYTPQDDAEPAENHTTDVQTTVTSQLASANDTLPHNLIIGEWSCALTPDSLKNESDPQQARRDFCTAQYVAYTRDTPGNSFWCTSSTFSTCFPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g137 ### # start gene g138 Scaffold_1 AUGUSTUS gene 738353 738712 0.64 - . g138 Scaffold_1 AUGUSTUS transcript 738353 738712 0.64 - . g138.t1 Scaffold_1 AUGUSTUS stop_codon 738353 738355 . - 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_1 AUGUSTUS CDS 738353 738712 0.64 - 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_1 AUGUSTUS start_codon 738710 738712 . - 0 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [MVPSIFECAAEPKIAEIDIANGGCNPQGILEKHWDNFITQQDFNYLASIGINTVRLPIGYWSLGPNFVQDTPFANVSS # VYENAWPHVVRAINMAEVSNIAVIVDLHGAPGSQKWPGTWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g138 ### # start gene g139 Scaffold_1 AUGUSTUS gene 741128 742079 0.49 - . g139 Scaffold_1 AUGUSTUS transcript 741128 742079 0.49 - . g139.t1 Scaffold_1 AUGUSTUS stop_codon 741128 741130 . - 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_1 AUGUSTUS CDS 741128 741537 0.53 - 2 transcript_id "g139.t1"; gene_id "g139"; Scaffold_1 AUGUSTUS CDS 741584 742079 0.54 - 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_1 AUGUSTUS start_codon 742077 742079 . - 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MPLPEEASTSTDPVSFSSLGLIKPLLEALEQLKFTEPTEIQQQSIPYALEGRDIIGVASTGSGKTAAFALPILQKLWD # EPKGLFACVLAPTRELAYQISQQFEALGSAMGVRCAVIVGGMEITAQAVALAKKPHIIVATPGRLNDHLENTKGFSLRNLKYLVRTFDEADRLLDMDF # GPVIDKILKVIPKERSTYLFSATMTTKSQNYNEQVCQIPSGWKYRLSELYAHPVSLSTTKNCYRYQTVSTLLQYYCLMPQKEKDTYLIYLANTLAQNS # IIIFTRTVHDAARCGIPETLCFSCSQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g139 ### # start gene g140 Scaffold_1 AUGUSTUS gene 742227 742901 0.37 + . g140 Scaffold_1 AUGUSTUS transcript 742227 742901 0.37 + . g140.t1 Scaffold_1 AUGUSTUS start_codon 742227 742229 . + 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_1 AUGUSTUS CDS 742227 742901 0.37 + 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_1 AUGUSTUS stop_codon 742899 742901 . + 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [MDEIGIEIQKHVRWSKLIDMQYSSHIALQEPTFESVVTEKTALFQELQEEDLYTKYKKLSRHLELLEIQEGYIKDEQA # NLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQHTGIVGSTTGSNYVVRILSTLDRELLKPSSSVALHRHSNALVDILPPEADSSISMLGASEKPDVTY # QDVGGMDTQKQEIREAVELPLTHFDLYKKIGIDPPRGVLLYGPPGILS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g140 ### # start gene g141 Scaffold_1 AUGUSTUS gene 744672 746516 0.96 - . g141 Scaffold_1 AUGUSTUS transcript 744672 746516 0.96 - . g141.t1 Scaffold_1 AUGUSTUS stop_codon 744672 744674 . - 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_1 AUGUSTUS CDS 744672 746516 0.96 - 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_1 AUGUSTUS start_codon 746514 746516 . - 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [MPSAADAWSFNLRNHNLDFSDSDSDSDSGDASSNIAPAFDETKLLNDFDLSTREETVIYKPNPFNIARINAASRAQKF # ISSAPKPDLLLTSKSGLAKGTIIDCFRLQAQKSKLVAPSTSNDIDIDKPATPLNHHLVKSQNDNTPSSLPSSIPNLSDAKNNGHNKYPVAHIFPHIAP # GSHAPRFRQNSGTFSSPIRPAASIANLKSHLNRGHASSPVAPSHRLELHAPLPHSSSSYHPPNALAISNDHSCVDSTKFPALASIYPLRPQDNIYSEI # HDPAFTYSPLRAHMTTTPPNRPLQVQVPNQTLNSNNLKHRTNFIRHSPILSPRSSRLPAHKIASAKKHRDTTSRSARTNLKPNPYDSLPMGEGEEWGT # LEPAKKKMKPSRQVDTFETICSSIETPQFRENEFGIRTSSKFTLGSLGMDLGKGKKTGMSAESSRRVITFLPPPLNSKSRSLSEDETRSPPPKIVEDA # IDLNYTSVQARNFEHDDHDLCASPEHSNVQHHITMVLLGGRAHKSPVTPARKISNPYPSPQVSALSVGDAPRDLEVPSGRRVTAIDKTCSDLYRPPSP # PTSDPPQQNETFGRDTSIPLDIGSISRRYPGIQRMSRKVRVERNYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g141 ### # start gene g142 Scaffold_1 AUGUSTUS gene 750811 751212 0.69 + . g142 Scaffold_1 AUGUSTUS transcript 750811 751212 0.69 + . g142.t1 Scaffold_1 AUGUSTUS start_codon 750811 750813 . + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_1 AUGUSTUS CDS 750811 751212 0.69 + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_1 AUGUSTUS stop_codon 751210 751212 . + 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [MTSMQRLLQAVSPWHGRILIYVWAVEQDDLSKRQIPVVDDPHAVGQSGKDVFVPWVLSSSADSEKLQAEQVFNRYYHM # FAKGELEQLVSEAAKELGLHVGLKSESAGACRGIDFEQDGWERSNHYVELRCWAV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g142 ### # start gene g143 Scaffold_1 AUGUSTUS gene 751349 752320 1 - . g143 Scaffold_1 AUGUSTUS transcript 751349 752320 1 - . g143.t1 Scaffold_1 AUGUSTUS stop_codon 751349 751351 . - 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_1 AUGUSTUS CDS 751349 752320 1 - 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_1 AUGUSTUS start_codon 752318 752320 . - 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MSAYIQNKLAKGEKLQFFITGATGYIGLVLTEFAIAQGFSVRGLSRSEAGDEKLKSLGATPVRGDITTHEVLARESAA # ADAIIHLAWNHDWSGDYNKIVDTDIAAVEAICAQIKDTGKPLVIASGCAGAQPNADGSDSDENAPLRPNLPVARRLESEINAIKKQGIHGCSIRLSPY # VYGRGGKGFLVMLMGQAVKLNESLYINDGSFHTSVLHVEDAARLFIAAVLKGKAGEAYNGVGQTDVSLKDMAEAIGKVIGVPVRPASLEEAIEKWSPP # ILPRFNYLDVRGSNKKAKELLGWKPEGVDFITDIVSGSYVPVAAYLKTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g143 ### # start gene g144 Scaffold_1 AUGUSTUS gene 754230 754966 0.58 - . g144 Scaffold_1 AUGUSTUS transcript 754230 754966 0.58 - . g144.t1 Scaffold_1 AUGUSTUS stop_codon 754230 754232 . - 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_1 AUGUSTUS CDS 754230 754670 0.86 - 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_1 AUGUSTUS CDS 754745 754966 0.58 - 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_1 AUGUSTUS start_codon 754964 754966 . - 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [MSAHIEEVTSDHSDHEGHVHDHDHDHDHDHDHNHDHDEDPTSAAALDKIQSRSERKARKALISLGLKRVPNITRILFV # LASPDVYKSPNSDCYIVFGEAKVRSLISASKIPAHGFVDRGHERAKSKSAQQLAGAGGADIPNLESSGVGGGDDDDIPELEAAEEEGPVDETGVDPKD # IDLVMTQVRNQYPGRHWTHITDILGELLPGKGCSSTKRKWRRPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g144 ### # start gene g145 Scaffold_1 AUGUSTUS gene 758843 760022 0.23 + . g145 Scaffold_1 AUGUSTUS transcript 758843 760022 0.23 + . g145.t1 Scaffold_1 AUGUSTUS start_codon 758843 758845 . + 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_1 AUGUSTUS CDS 758843 759154 0.23 + 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_1 AUGUSTUS CDS 759228 760022 1 + 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_1 AUGUSTUS stop_codon 760020 760022 . + 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MEALSSGADISMIGQFGVGFYSAYLVAERVQVISKHNDDEQYIWESAAGGTFTITQDTVNPPLGRGSEIRLHLKEDQL # EYLEEKRIKDIVKKHSEFISYPIQLAEVSDDEAEEEEDAENKPKIEEVDDEEKPKDKKTKKIKEVETTNEELNKTKPIWTRNPSDITPDEYSAFYKSL # TNDWEDHLSVKHFSVEGQLEFKAILFVPKRYGIHSWVSNALLNHFHSAPFDLFESKKKRNNIKLYVRRVFIMDDCEDIIPEYLNFVKGIVDSEDLPLN # ISRETLQQNKILKVIRKNIVKKCMDMFSEIAEDKDNFNKFYEAFGKNLKLGIHEDAQNRSKLAEFLRFFSTKSTDEQTSLKGKLIILVFRVAYH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g145 ### # start gene g146 Scaffold_1 AUGUSTUS gene 760049 760462 0.99 + . g146 Scaffold_1 AUGUSTUS transcript 760049 760462 0.99 + . g146.t1 Scaffold_1 AUGUSTUS start_codon 760049 760051 . + 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_1 AUGUSTUS CDS 760049 760462 0.99 + 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_1 AUGUSTUS stop_codon 760460 760462 . + 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MPEVQKSIYYLTGESLAATRDSPFLEVLKKKGFEVLLLVDPIDEYAITQLKEFDDKKLVCVSKEGLELEETEEEKKAR # EAETTAFSELCTVVKDALGDKVEKVVISNRITDSPCVLVTGQFGWSSNMVRCVVFSYPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g146 ### # start gene g147 Scaffold_1 AUGUSTUS gene 762981 763688 0.91 + . g147 Scaffold_1 AUGUSTUS transcript 762981 763688 0.91 + . g147.t1 Scaffold_1 AUGUSTUS start_codon 762981 762983 . + 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_1 AUGUSTUS CDS 762981 763688 0.91 + 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_1 AUGUSTUS stop_codon 763686 763688 . + 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MTEARPVNFGAGPSALPESVLEEACKGLFNFKGTGIGIAEISHRSKEFTSLVADLENNIRTQLGVPPTHKIIFTQGGG # TGQFSAVVLNLLARHRLLHPDLSDEQRVLDYVITGSWSKKAMEEAKRLGGGSVHIAVDARAKSEDSKSYDNIPAHEDFDFSADPALIYYCENETVDGV # QFSNDVQSPASFPFHLLPAGGLWPLVADYSSSFMSRKIPRIADHAVIFAGAQKNIGPAD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g147 ### # start gene g148 Scaffold_1 AUGUSTUS gene 768988 769770 0.63 + . g148 Scaffold_1 AUGUSTUS transcript 768988 769770 0.63 + . g148.t1 Scaffold_1 AUGUSTUS start_codon 768988 768990 . + 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_1 AUGUSTUS CDS 768988 769098 0.64 + 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_1 AUGUSTUS CDS 769197 769282 0.85 + 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_1 AUGUSTUS CDS 769341 769770 0.89 + 1 transcript_id "g148.t1"; gene_id "g148"; Scaffold_1 AUGUSTUS stop_codon 769768 769770 . + 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MAHVVQPLDQPSNYKDSQARVDRKRQNEMLSNSTTLYIYELFSKCANAADGGGIKRIIMGLDRNTRTPCGFCFVEYYT # HTEALASMRYVSGTKLDERIIRCDLDLGYKEGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRLEVERRRAVEERYADAQDGPGAVAGGGEDWKEI # ETSEGKLKRGRSPEDEGDNARMVRSATFSLLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g148 ### # start gene g149 Scaffold_1 AUGUSTUS gene 772623 773249 0.97 + . g149 Scaffold_1 AUGUSTUS transcript 772623 773249 0.97 + . g149.t1 Scaffold_1 AUGUSTUS start_codon 772623 772625 . + 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_1 AUGUSTUS CDS 772623 773249 0.97 + 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_1 AUGUSTUS stop_codon 773247 773249 . + 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MVTSATEVHKKKKPPSFNHYPEAKGKTLINVLSLNHLIYVSLAKSLKKAWVEKTKIKSKWRAERRKMGLPSRSFPTQN # VDAQKEKQNDKADSEAEDDKESELADETVTTPELPVKFQRGPPRPNVSSTAQSKQPKEQLKEHETPDLRELTRKAYSRETLHTYKSDPLNRRGGINGG # KRHSRGGNRGRGQPNMKLRMGVMLEKIKRDFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g149 ### # start gene g150 Scaffold_1 AUGUSTUS gene 773266 774674 0.29 - . g150 Scaffold_1 AUGUSTUS transcript 773266 774674 0.29 - . g150.t1 Scaffold_1 AUGUSTUS stop_codon 773266 773268 . - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_1 AUGUSTUS CDS 773266 773639 0.98 - 2 transcript_id "g150.t1"; gene_id "g150"; Scaffold_1 AUGUSTUS CDS 774080 774308 0.98 - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_1 AUGUSTUS CDS 774549 774674 0.3 - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_1 AUGUSTUS start_codon 774672 774674 . - 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MSQYFLTVNTSAYAKPKVIILRCLEPLLSIEKSTARAELHKPQKITDHDNVLKQIADTDVVEYEQSTVPVSISINDHD # SVKWDLLKDIIKYKTEQVHPPSLLFPIIPNDGSFTGRTFPXSQPLSIPNTPLFSPIPFLHNDARRSKSRSPPPSPLALSSAGPVSGGHPETLSLEPAP # LGLVDELDDPRPGHMSDHPTALSAVTTVDDGKEGTPIVQSLESRFVKAEDEDSTMAVDENKENQST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g150 ### # start gene g151 Scaffold_1 AUGUSTUS gene 776541 777299 0.7 - . g151 Scaffold_1 AUGUSTUS transcript 776541 777299 0.7 - . g151.t1 Scaffold_1 AUGUSTUS stop_codon 776541 776543 . - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_1 AUGUSTUS CDS 776541 777299 0.7 - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_1 AUGUSTUS start_codon 777297 777299 . - 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MVLQFLLSPLDAPASALSSVATTSASSYPQSVSSSSHGRNTVDPFTMSSYLLSASSLVSDTRGLPSRLQRLSVARGGS # GADVILDDELLAEGEWEIMQRTSEEMQQLEQRWRDDGTLDTMDEASFKASQKHETTRRKEKQTQARTESLAADSARHPVSKRINPEALSSFMLNPGNG # FDQALDLDTSEILGLEFLEDDMDDKGAGDEILVLDEGNEADAFRMAPDTGSGDEITVDDWRPPSPGLNNTFDDYYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g151 ### # start gene g152 Scaffold_1 AUGUSTUS gene 777440 778234 0.9 - . g152 Scaffold_1 AUGUSTUS transcript 777440 778234 0.9 - . g152.t1 Scaffold_1 AUGUSTUS stop_codon 777440 777442 . - 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_1 AUGUSTUS CDS 777440 778234 0.9 - 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_1 AUGUSTUS start_codon 778232 778234 . - 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [MHGFIKSLTLTLSVSGLSPRVCNLFDQAMKTAQFKWGTKAKAVAGACLSIALRESSRPDSLKDIAFLIEQSDVNLKRT # LSSVLSALKLTLKSSSPAQFLTILQSHLSSILQAPMDSSGMDISLWSELKSLSIRSAVETARLFIDILSRSASESTILRNSPAAAACAIFIMSLEAEK # RGPLSCLADISACFADSCTVAKVTVTSRYQALHKEVSSWIKEVEWLDSYQKPNQRAKVSKRLLCARGLKDVLNCKNVHGKPGRGGRQV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g152 ### # start gene g153 Scaffold_1 AUGUSTUS gene 781295 781609 0.85 + . g153 Scaffold_1 AUGUSTUS transcript 781295 781609 0.85 + . g153.t1 Scaffold_1 AUGUSTUS start_codon 781295 781297 . + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_1 AUGUSTUS CDS 781295 781609 0.85 + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_1 AUGUSTUS stop_codon 781607 781609 . + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [MANARIALQLSTREGFEVKVSEAIHAGVPIIASLTGGIPLQVEHGKSGYLTAPGDNAAVAKHLLELYTDDDLWQKVSD # YAKTHVSDEVGTVGMYCSPFLSVLQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g153 ### # start gene g154 Scaffold_1 AUGUSTUS gene 783604 784125 0.95 + . g154 Scaffold_1 AUGUSTUS transcript 783604 784125 0.95 + . g154.t1 Scaffold_1 AUGUSTUS start_codon 783604 783606 . + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_1 AUGUSTUS CDS 783604 784125 0.95 + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_1 AUGUSTUS stop_codon 784123 784125 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [MDATKSQGSMTGQEERDVLFARLFGMTAIIQSGLIVRTKPLPTSQSSATLASSFEGYEQVLTELLALGEKKSWLRESA # WWAISLAADSLKATEVPWKDEAVHATAQHLFVENKIWSPEKIALALKLQSAFEEFNWRPLFSPTFKNPDLLSNVNLQTLALILKASERHDKVTGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g154 ### # start gene g155 Scaffold_1 AUGUSTUS gene 786081 787155 0.6 + . g155 Scaffold_1 AUGUSTUS transcript 786081 787155 0.6 + . g155.t1 Scaffold_1 AUGUSTUS start_codon 786081 786083 . + 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_1 AUGUSTUS CDS 786081 786396 0.67 + 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_1 AUGUSTUS CDS 786467 787155 0.91 + 2 transcript_id "g155.t1"; gene_id "g155"; Scaffold_1 AUGUSTUS stop_codon 787153 787155 . + 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MDEVEVEDNEDEDKSANGEDAEDGSQSSDDDEEDDENEDSDNEEVDEELRQRILEALAVNGIKAANEEDEDSEEEEYM # DDDQMMAIDEHLAEVFRSRVNEKKASKDLDAQREATHFKNRVLDLIDIFIKKQPSSPLIVRLIIPLVDLITRSTTDEKQLSDKARGIARSRIGKAKEF # ASAEKKKVGGGGEKEEGEGEEQEEVTSIFETLHKRARTERSPDHLSILSDCCIYISQVMLRAGMQDHVVVQYRHSLIDFISRKNSSLNVSFFQQFFRR # SRTAAWNLRNDLLEVSGKAANLYRQFQAYQLIHDLLTEPPFDVSTTSLLLSFVYNQFADP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g155 ### # start gene g156 Scaffold_1 AUGUSTUS gene 789446 790847 0.36 - . g156 Scaffold_1 AUGUSTUS transcript 789446 790847 0.36 - . g156.t1 Scaffold_1 AUGUSTUS stop_codon 789446 789448 . - 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_1 AUGUSTUS CDS 789446 789784 0.91 - 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_1 AUGUSTUS CDS 789908 790176 0.99 - 2 transcript_id "g156.t1"; gene_id "g156"; Scaffold_1 AUGUSTUS CDS 790283 790847 0.38 - 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_1 AUGUSTUS start_codon 790845 790847 . - 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [MDPRLLAAFNVSGPPIWRIVTGAQDQQQNQSQDIINMRPMLFGVSLQRVTNTGDSYGDGDIFHPGHGYGYGYGYGVDL # ELGGEAAAPCEHPRASIISQNHISGLLTIGGLPPNLTDADLTWALVRRYTVPQGGLKGGVGAEDEVYPITWEIPIDGVYLDGNRIPDPAELESGDIGV # TALIDTVSFMKRWREDASSSSHPSTDTSTSCTTPHTLAFQIGGRMFPVEWRDLVWVEEEDEDRDSQQGDSEYENDEDNGEAEEEKGNGSRKRQCYLNL # APTDWCICGRVSVFHPSIHFINSQLSSSGFFNALSLTPFSIPSVIAAFYYGDTVHPSWDPPRIGLISTVIHGVDLGVDVEGGEDVGAEESESDVRSTV # AFEGGVEKDIGSEGVSLN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g156 ### # start gene g157 Scaffold_1 AUGUSTUS gene 795833 796480 1 - . g157 Scaffold_1 AUGUSTUS transcript 795833 796480 1 - . g157.t1 Scaffold_1 AUGUSTUS stop_codon 795833 795835 . - 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_1 AUGUSTUS CDS 795833 796480 1 - 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_1 AUGUSTUS start_codon 796478 796480 . - 0 transcript_id "g157.t1"; gene_id "g157"; # protein sequence = [MPQSPEVQHQTRLSSYFTPSPSPKKAKRRASAIVDLTIDSSDEERPFKRQRGSSTSLDISPGPSKSSSASASYNRAEQ # WSFDSSHSTSTEKDRTHISNSELGSNKLSKREALKKKLLLERESSFFLQSRSSTEKGSSSRIQSGAIDENRDTDSEPEFWATSNASTSNISKGKQKVM # PRAKRPEELGPSGEPWTPLEKQVALQFPIFLRLLTNYCH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g157 ### # start gene g158 Scaffold_1 AUGUSTUS gene 803388 806560 0.91 - . g158 Scaffold_1 AUGUSTUS transcript 803388 806560 0.91 - . g158.t1 Scaffold_1 AUGUSTUS stop_codon 803388 803390 . - 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_1 AUGUSTUS CDS 803388 805425 0.97 - 1 transcript_id "g158.t1"; gene_id "g158"; Scaffold_1 AUGUSTUS CDS 805500 806560 0.91 - 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_1 AUGUSTUS start_codon 806558 806560 . - 0 transcript_id "g158.t1"; gene_id "g158"; # protein sequence = [MSPPFLQRSPVDPAQRGERGVELIDFGSSAVPGRRRPASPLSGPSYQPFTAAAVSTSRPGTPSNVTWTIPASKSSPQK # SSGHNRNGSWFSDAEGSTDPHGGYSTSNGHSKSASASRSLRSPALPDSPILERGHANTAYFGGTYPYDNRPPSTISGIDLNSPTSNRPMRSPTPTQSP # ARSPTSPTFSGVDGSPKHSRRSSKQNGTSVPFSLAPYNPVLFSPLANSSRSSLESTGSSYHSWEADKFLFVDADSQVPPWHDLSLSSQSSSTTPAGSP # DTEWNPEDVIGSYAGLHKLDFAAIQETLVSAVASKNMTVSETRERVPSLRRRRPSTSQSNYSLNYTVRLSSFYYWSLIHLDQISKASALLNSVLESIN # TQHNDVSYDSSSPAINTADTPSASQDVSPTTRRNRDLAQILFGEDTHEGSPPAGASSPEDDSLQPKTFKEKELTTTLPLNVTTSSLDTSTIGLSSPSQ # SALYNPLRSPSTPHIPQTSEAQAELAREIQRKTDAAMLALRKRPSNSNLSKEGLVSPGPVRKKFNTNQISTPTLLSASTSVDTIPLRTPPFTSATSSG # PPSKIASRFRKLRGTLRKGNIPIEEIKVTPYPLDVKSNPSSHGSQPQFARYDSSKLHPMDSAVSATEIGRFRVPAVPVPSPPASAGPGLKGFMARFRG # KVRTADSVEYKGQQLRPSPYQMSPAQNPLFLSNSPLTEEVKPEREMNAQFLHPSQSPSSSSQPPLTPQLHMHPSDDSGDGVNQYESQALKQLFNAAND # LGLDQSKLSELLVRSGSISSKSTDWTMLTRNNSSATKSRQESRDERQFQSPTPQSEWSTFEDPGHRASKMPVSRKSSMKQSENVGVRRPRQRGPDDTN # TVIRRTIIYPEDRGVSVADLNALGRKNSSHRRRASAISATSSNRSIHERVPTPPPPHSPTGKRFSADESPPVPQLPQSWAARMDKGLVVPSAGGQSNT # PYDSVYAYNSNVIPPILISESRYDMYTGEKGSQSAPAEGSGSSDPGPALEVIELANGETIWWVHLIISGSLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g158 ### # start gene g159 Scaffold_1 AUGUSTUS gene 806620 807463 0.15 - . g159 Scaffold_1 AUGUSTUS transcript 806620 807463 0.15 - . g159.t1 Scaffold_1 AUGUSTUS stop_codon 806620 806622 . - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_1 AUGUSTUS CDS 806620 806907 0.95 - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_1 AUGUSTUS CDS 806994 807330 0.15 - 1 transcript_id "g159.t1"; gene_id "g159"; Scaffold_1 AUGUSTUS CDS 807444 807463 0.32 - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_1 AUGUSTUS start_codon 807461 807463 . - 0 transcript_id "g159.t1"; gene_id "g159"; # protein sequence = [MRQSTRSKHGSSRVTSAAPSEVSTSTSSVFGPSHEFRSTTPENDVLNNKQAVRSAPLIPPAPYGERSIPASAEYRLSK # SLGPSAFKRASLALEEAIRELEEDAEDEIVMPRSAPITRANDNPNSLPLDVYQAGMAISSDHQGQTETEEKRMSPIPSRILPGYIPGMPRPMTPREDM # DNDILRSHSITPRAATVTNPNDPTAFYPDMPNTPTPPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g159 ### # start gene g160 Scaffold_1 AUGUSTUS gene 809707 810931 0.52 - . g160 Scaffold_1 AUGUSTUS transcript 809707 810931 0.52 - . g160.t1 Scaffold_1 AUGUSTUS stop_codon 809707 809709 . - 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_1 AUGUSTUS CDS 809707 810647 0.53 - 2 transcript_id "g160.t1"; gene_id "g160"; Scaffold_1 AUGUSTUS CDS 810709 810931 0.64 - 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_1 AUGUSTUS start_codon 810929 810931 . - 0 transcript_id "g160.t1"; gene_id "g160"; # protein sequence = [MPKSLPGAVLDPASTSINSRWLWFHKGFVEGLKRARAPSETDQNFENLAYDLAETQVKLEETQTKLDDTAQVLGEVQK # LFREEIIVSSQGSDNNNDCTPSTNSSPTSPSLQSTRTYAESLQLPITPVATPLSARRALTLSNRRPNSRSSYEAIPDYYSTSEASQTSVDAALGTLIQ # KAHDGDERSISLIKVLCREAHGTPPERKTYGQRYILARWRNPSFCPRRGRSNTNPSSTSNPHLPQLINPQSNDPPEAWIAYYTRYPKSLPKGVRVNSK # TRAPLFGDIVASRLLARLRPTASQYRAEFNVAMINLFIHRGQFRQMVQDGQIQIPRIADIYQPFEPEGRIEQGQLISVLDVARHYAKCGVSIEDVENY # VEPWTEEYAKQKYEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g160 ### # start gene g161 Scaffold_1 AUGUSTUS gene 813221 813604 0.97 + . g161 Scaffold_1 AUGUSTUS transcript 813221 813604 0.97 + . g161.t1 Scaffold_1 AUGUSTUS start_codon 813221 813223 . + 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_1 AUGUSTUS CDS 813221 813604 0.97 + 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_1 AUGUSTUS stop_codon 813602 813604 . + 0 transcript_id "g161.t1"; gene_id "g161"; # protein sequence = [MYDDLIIVDDDEPQAGPSNTNTSSDAMNVPTSPAASTSTPGPSGPRTSSRLRASSQAQQNAPLVSTPSLASTAPEKVS # TRSGSQRGKPQPKLKLKLSEKLAAQAPGMSFLGQYDRELDSDDTRGSNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g161 ### # start gene g162 Scaffold_1 AUGUSTUS gene 813836 815038 0.47 + . g162 Scaffold_1 AUGUSTUS transcript 813836 815038 0.47 + . g162.t1 Scaffold_1 AUGUSTUS start_codon 813836 813838 . + 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_1 AUGUSTUS CDS 813836 814001 0.51 + 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_1 AUGUSTUS CDS 814123 814242 0.79 + 2 transcript_id "g162.t1"; gene_id "g162"; Scaffold_1 AUGUSTUS CDS 814301 814698 0.81 + 2 transcript_id "g162.t1"; gene_id "g162"; Scaffold_1 AUGUSTUS CDS 814760 815038 1 + 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_1 AUGUSTUS stop_codon 815036 815038 . + 0 transcript_id "g162.t1"; gene_id "g162"; # protein sequence = [MESQKTLDNKQMFKVADICQVIHVLYETDHTLARIDLPIQMLVVENRIDNEDVVTLPLRGADADDHPCCGQTIETVEQ # EVERLLEEDNLAKEIKYEILENVNPDLSDSEFLEREEPIDAPTPAISDLGDPSTPSVIPGDDGEDDEEGDEEPEGDIDEELAAELDLALGDEDEDGDD # EEEEDSDEDDEDDDDDEISQARKLLNEEIRDLQAAVAKKGSEIASSANPLIRKRFEDALKKLTSDLEMKLAQRDELQEKQRMEDEGIVVNNVGGGGDS # DFEEVEVDGIAGGVLGSVVGGSGQLGQLGPEDDDLFGGEDATMDMT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g162 ### # start gene g163 Scaffold_1 AUGUSTUS gene 817857 818821 0.86 + . g163 Scaffold_1 AUGUSTUS transcript 817857 818821 0.86 + . g163.t1 Scaffold_1 AUGUSTUS start_codon 817857 817859 . + 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_1 AUGUSTUS CDS 817857 817872 0.92 + 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_1 AUGUSTUS CDS 817935 818821 0.86 + 2 transcript_id "g163.t1"; gene_id "g163"; Scaffold_1 AUGUSTUS stop_codon 818819 818821 . + 0 transcript_id "g163.t1"; gene_id "g163"; # protein sequence = [MPFIEEEPTTNSQPDIVVANTGFIQERINDEPSLSSTQAADSEPHKPASITTLPFDIIEEITLLATGYYDDCVDLPDT # LDTHADVPAKFVQVCSRWRSAVFASARAWSTVIIKDTRTPYFRLRKLQASISRARTTPLRVYIDLKHGACVKIFEEIMESFSESRLFDLEVRVPGYLF # SCLRELPPQSTETTLRRLSLVQLPYADRIPIDDLVGVIPFTPSFITRDISSPIILRSVPELRELSLRDIAYPRFMLKKIKSKRLTTLALSFPHTRRSR # TPHPPSEPERAFGFSITQSAFTSHDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g163 ### # start gene g164 Scaffold_1 AUGUSTUS gene 819887 821456 0.32 - . g164 Scaffold_1 AUGUSTUS transcript 819887 821456 0.32 - . g164.t1 Scaffold_1 AUGUSTUS stop_codon 819887 819889 . - 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_1 AUGUSTUS CDS 819887 821195 0.81 - 1 transcript_id "g164.t1"; gene_id "g164"; Scaffold_1 AUGUSTUS CDS 821431 821456 0.4 - 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_1 AUGUSTUS start_codon 821454 821456 . - 0 transcript_id "g164.t1"; gene_id "g164"; # protein sequence = [MDDRLDLGIGGLAPPNTGNPVQSTKSKNPQTSTFTTNNTLRPLPTLPNSRIAFFINGQPQGTAFHTLYDFLQLPQSER # KFKEKDKRKPRTRDGLKESHKDNPFDDGSLGYYPFISLFNDAEVRINPGPVFEYPPVEDIDAVLDGTNDPDAIIPDTPTDPSLNPNPRPSTRTWRPLS # ARYPEYMAEQWELDEREELEAQETLAELDAQDRAVAQRERQKKVQRERKRKEKEKEKETEARKRTRVGSKDKGGVVKEKSKSPSVGLAGGLGLLSQPQ # PSPLRHASVTAYEEYEEYGEFKDSPAAYAAPGTPLETPLEPLHHTLQYTLPDITMDTLPDITTDTPVDIDTPPHDTPMEMIIIQETPSSPAPVVDPVD # TPGPDFDIGNGDDVLNGGEDRGGGGGGVEDRGGGEEEEEEEEGYVVSGVGNDTAGIGDIAGIGIVTEAVEEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g164 ### # start gene g165 Scaffold_1 AUGUSTUS gene 824357 825244 0.4 + . g165 Scaffold_1 AUGUSTUS transcript 824357 825244 0.4 + . g165.t1 Scaffold_1 AUGUSTUS start_codon 824357 824359 . + 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_1 AUGUSTUS CDS 824357 825244 0.4 + 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_1 AUGUSTUS stop_codon 825242 825244 . + 0 transcript_id "g165.t1"; gene_id "g165"; # protein sequence = [MQTFNNSSHSRIPELNLLSFTFLPLVHEDNYALALLYIDYNEHIQLVSRNLRISPSSESNVDLDISSYSHLLPPTTIS # YKHLPNPAETAVHLIPIPPDEDYMYDMHMHMDEDEHETDVFLGGILVVGGRKVLLYELTSQETREFKPVKGKGKRKRDSKKQIDVSTSTPTPNTDFGS # SKQKNLNEIKKRDPRATVEWPWSWVTAYVFVALPDCLNYAHILCIILLCSCTPVDEDESSHKILIGDAFGRLAMLSLYRFKEFGMALIPLGEVSSSFL # PRSLLNVQKLFVLCLTGNGLM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g165 ### # start gene g166 Scaffold_1 AUGUSTUS gene 828361 828876 0.43 + . g166 Scaffold_1 AUGUSTUS transcript 828361 828876 0.43 + . g166.t1 Scaffold_1 AUGUSTUS start_codon 828361 828363 . + 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_1 AUGUSTUS CDS 828361 828876 0.43 + 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_1 AUGUSTUS stop_codon 828874 828876 . + 0 transcript_id "g166.t1"; gene_id "g166"; # protein sequence = [MEWNHNYMVTSLSAYRNHLVVADQFSSVSLLRLEGEEGDDNGDGDGDGDDDGGGNRKLVTVARDYSPLWPVCVEAVDD # KSFVGADVSFFFKLCWMNGGFLREIVVDLWFGTYASCGSQQSLNMFTFSLSGSTTNNRTILVRDGFYHVGDLITKFIRGKIHSPIYLSFCLPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g166 ### # start gene g167 Scaffold_1 AUGUSTUS gene 831838 832353 0.49 + . g167 Scaffold_1 AUGUSTUS transcript 831838 832353 0.49 + . g167.t1 Scaffold_1 AUGUSTUS start_codon 831838 831840 . + 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_1 AUGUSTUS CDS 831838 832353 0.49 + 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_1 AUGUSTUS stop_codon 832351 832353 . + 0 transcript_id "g167.t1"; gene_id "g167"; # protein sequence = [MISIPIKRSPHSITGIEGHEAQWHTSPNGSTRSGPSNIAWLRHDPSRDEDQLPVRPPAARLGMVRHTAIPLSRSISSP # ASSQLQVYPARRLGMNPAHAGSTFSLRMDGQSHVSTLYGDAYNYPLVKPLSPIAEQDYFSPESLRKTIQLPPDTSTSISPSVSSPAGSHSTRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g167 ### # start gene g168 Scaffold_1 AUGUSTUS gene 832793 833716 0.7 + . g168 Scaffold_1 AUGUSTUS transcript 832793 833716 0.7 + . g168.t1 Scaffold_1 AUGUSTUS start_codon 832793 832795 . + 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_1 AUGUSTUS CDS 832793 833716 0.7 + 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_1 AUGUSTUS stop_codon 833714 833716 . + 0 transcript_id "g168.t1"; gene_id "g168"; # protein sequence = [MDYGSTPSPLPVPAPVAQSQSYSKILPVEFTETDVSMIRSDGSSVQAYTRSPASVSSSFIRRRWDKDAGYPVGPGAFN # LKPKRQCFYIDATPALWAFLLGFFFPVLWFVGGWHFTNFGEQPARLTLWEFYFNGAYWRELFCCGRGKLKWNDQLKESESSESKKGKGKEREKPLRIR # HPPPLPRWITEKLSTDVKKARLNDAKRSLRGISFGYPFVPRPVVCSSSSHSNATQAARRIMSVLSRPNRFLDQFYGVRLRDVRGKREGPRRIFDPWIQ # RCRYAFCYAMVLFLCGLATAATTLIIFSLRDFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g168 ### # start gene g169 Scaffold_1 AUGUSTUS gene 845249 845623 0.4 - . g169 Scaffold_1 AUGUSTUS transcript 845249 845623 0.4 - . g169.t1 Scaffold_1 AUGUSTUS stop_codon 845249 845251 . - 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_1 AUGUSTUS CDS 845249 845623 0.4 - 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_1 AUGUSTUS start_codon 845621 845623 . - 0 transcript_id "g169.t1"; gene_id "g169"; # protein sequence = [MEGDPVAGSELPVPIPVVNAGPSTSPTTPSAHTQYNIYITTPSSALSWYSPDSCTYSTIEAAQEAGIWDFPLNLQDRA # RYGVFKDLWEQGYFLGGGIRFGGDYLVYPGAYGLSSPGVTPLMFKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g169 ### # start gene g170 Scaffold_1 AUGUSTUS gene 848450 850181 0.7 + . g170 Scaffold_1 AUGUSTUS transcript 848450 850181 0.7 + . g170.t1 Scaffold_1 AUGUSTUS start_codon 848450 848452 . + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_1 AUGUSTUS CDS 848450 849226 0.75 + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_1 AUGUSTUS CDS 849310 849566 0.9 + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_1 AUGUSTUS CDS 849620 850181 1 + 1 transcript_id "g170.t1"; gene_id "g170"; Scaffold_1 AUGUSTUS stop_codon 850179 850181 . + 0 transcript_id "g170.t1"; gene_id "g170"; # protein sequence = [MDVDTSSFHLEPPPPAYSFPQAVASAAPTVTTFADAIDNLFYESMSPRRCVESPPAHQPKKRRSLSPNPPRLVEDHSS # PSPALPVSPVQRKLERKASGPLLASFSKPSLQGLGNPSINGLKRPRRPALSAMVPPSDAALHSAYPAPTSADNQITDGRFPPTRRAFSAMLPPAPSSP # LGESSGDSSFDLSADMSSPAQAYAKRQQMKTIRRCDGTDDFRPLTGATAMIMNESPSSKFMVDGGMPGFGDNETHGKILPCHRLQMDLLLDGAFDDKI # RDFHVIDCRFDYEYAGGHVPGAVNINTTASVEDLLLGPSLMKPKPSVSGDGQKKTVLIFHCEFSAKRAPTFAKHLRSKDRAMNNHFYPKIHYPELYIL # EGGYCSYYKRSAHRCEPSGYVSMDDPQHAASRKGDLDQFRKNKFGRHKSYAYGDGASKLSLASQQIKRNSAPTVGGPPVLFAAGNAARHRRGTIGNGS # LSTLSEDSHHTTEGDETDIDLGDSPCPAPSKSIALKVKKGNRAPLSRAETYGPTRMPFLGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g170 ### # start gene g171 Scaffold_1 AUGUSTUS gene 855163 855651 1 - . g171 Scaffold_1 AUGUSTUS transcript 855163 855651 1 - . g171.t1 Scaffold_1 AUGUSTUS stop_codon 855163 855165 . - 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_1 AUGUSTUS CDS 855163 855651 1 - 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_1 AUGUSTUS start_codon 855649 855651 . - 0 transcript_id "g171.t1"; gene_id "g171"; # protein sequence = [MGYTYPEFNNLDVGNEVAVRSAIAAQVNKLYGGPFTKFAAAIQQPSCQTTADASAIGNVTSDASSHLVDSKINLTLNR # SIDDAPQVKIASTVRNNEQKEFWEWTARVQVKKYEIGGSFKVLFFLGSVPSDPKEWATDPHFVGAFHGFVNRLAAISLSQYFNL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g171 ### # start gene g172 Scaffold_1 AUGUSTUS gene 859346 859876 0.99 - . g172 Scaffold_1 AUGUSTUS transcript 859346 859876 0.99 - . g172.t1 Scaffold_1 AUGUSTUS stop_codon 859346 859348 . - 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_1 AUGUSTUS CDS 859346 859876 0.99 - 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_1 AUGUSTUS start_codon 859874 859876 . - 0 transcript_id "g172.t1"; gene_id "g172"; # protein sequence = [MLLTTGNYFASHGIVAVIINYRLVPDVAYPGGGNDIQMAREWVYHNISKQQSGNGDPEKVVLVGSSVGGLHIATNIYL # ADHSNVNSKPVFPPIAGIVYLSTPFSFDTTPEDRQTALRAYYETEDAKEIYEYSPVGLIEALSASSLVLDPRKFPCLIVLAQYDPYVITFGLLSRDDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g172 ### # start gene g173 Scaffold_1 AUGUSTUS gene 861700 862811 0.23 - . g173 Scaffold_1 AUGUSTUS transcript 861700 862811 0.23 - . g173.t1 Scaffold_1 AUGUSTUS stop_codon 861700 861702 . - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_1 AUGUSTUS CDS 861700 862028 0.98 - 2 transcript_id "g173.t1"; gene_id "g173"; Scaffold_1 AUGUSTUS CDS 862089 862580 0.67 - 2 transcript_id "g173.t1"; gene_id "g173"; Scaffold_1 AUGUSTUS CDS 862697 862811 0.24 - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_1 AUGUSTUS start_codon 862809 862811 . - 0 transcript_id "g173.t1"; gene_id "g173"; # protein sequence = [MGTITNHFPLDDARKTKLQSLKAQVEDAQKQLDAAHARRSGAEKEAENKPLTSAERVVSNDADTETRPNSSKRRRTDA # GYEDSAATSLARTKEEISGLHVTLREVLERVSIVENNIASQETEVREVMQAYHAQGEAGESSIVNPLEASYQSYAGEQMDDIAMNLTELSEWIAELYI # DNASIDERHKDMIAKKEGEEAEIRVVTRVEEHEKSRAKDRNEIEALSAALTAYYEKPVSPPSSPFDPETVVLDMEEQIKELVRNAIKPHVEETRTTLS # EDLQKYDSELYRSLWKKLSMTNQVIAAVSEATTRPPT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g173 ### # start gene g174 Scaffold_1 AUGUSTUS gene 868166 868555 0.6 + . g174 Scaffold_1 AUGUSTUS transcript 868166 868555 0.6 + . g174.t1 Scaffold_1 AUGUSTUS start_codon 868166 868168 . + 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_1 AUGUSTUS CDS 868166 868555 0.6 + 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_1 AUGUSTUS stop_codon 868553 868555 . + 0 transcript_id "g174.t1"; gene_id "g174"; # protein sequence = [MDPTFTPDTKSNSPIYATPSVRHIARQRGVDLSQLAPGSGKDGRIERRDIDDYLAGAATTGAPVALQDDQDVVVELGR # TRHSMWKAMEKVHSSINHVDINTDQQSRVYIYPTLGEFLDTSTRSGLNTQW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g174 ### # start gene g175 Scaffold_1 AUGUSTUS gene 868932 869303 0.75 + . g175 Scaffold_1 AUGUSTUS transcript 868932 869303 0.75 + . g175.t1 Scaffold_1 AUGUSTUS start_codon 868932 868934 . + 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_1 AUGUSTUS CDS 868932 869303 0.75 + 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_1 AUGUSTUS stop_codon 869301 869303 . + 0 transcript_id "g175.t1"; gene_id "g175"; # protein sequence = [MYALSSQLKYLSHLGRQIPCGLTPKEMPKRGGTLTVSNVGAIGAGDFAAPVLVPGGGVAIVALGRAKWVWDVDRGDGS # GERRLKLGVSWSADHRVIEGAELAAFVECWRGYVENPARLIADSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g175 ### # start gene g176 Scaffold_1 AUGUSTUS gene 869385 869876 0.19 - . g176 Scaffold_1 AUGUSTUS transcript 869385 869876 0.19 - . g176.t1 Scaffold_1 AUGUSTUS stop_codon 869385 869387 . - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_1 AUGUSTUS CDS 869385 869770 0.99 - 2 transcript_id "g176.t1"; gene_id "g176"; Scaffold_1 AUGUSTUS CDS 869867 869876 0.19 - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_1 AUGUSTUS start_codon 869874 869876 . - 0 transcript_id "g176.t1"; gene_id "g176"; # protein sequence = [MGKFLDVDSHSILIDFEGLAGSVTSIAPSPTFMVSVARDRYCRIHSTFPAPEQPGQQQEHKGEVLEKIFSKSTPTVVV # WDGDHSSTKPIASSQELEEGDGDSDEDVWDNMEEVDDDGKVQGSKTTKKQRND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g176 ### # start gene g177 Scaffold_1 AUGUSTUS gene 875717 876908 0.32 + . g177 Scaffold_1 AUGUSTUS transcript 875717 876908 0.32 + . g177.t1 Scaffold_1 AUGUSTUS start_codon 875717 875719 . + 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_1 AUGUSTUS CDS 875717 876080 0.49 + 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_1 AUGUSTUS CDS 876303 876609 0.39 + 2 transcript_id "g177.t1"; gene_id "g177"; Scaffold_1 AUGUSTUS CDS 876710 876908 0.53 + 1 transcript_id "g177.t1"; gene_id "g177"; Scaffold_1 AUGUSTUS stop_codon 876906 876908 . + 0 transcript_id "g177.t1"; gene_id "g177"; # protein sequence = [METYIKKAEDLEAVNNNFMPPLLDAILGDYNRNVPAARDAEVLNVMATITSRLGVRPVSNTSLLYCADCRSQALLTPQ # IPAILDAVFEPTLTMINQDFAEFPEHRVGFFKLLRAININCFPLCLEVVNNFANAGDPSVSNAFFQQYFLSIVQDIFFVLTDTDHKSGFKLQSALLAR # MFELVELNAIQTPLYDPSQVSDPNVTNSMFLREYTANLLKTAFPHIQPDINRFKLALRDFLIQLKEFSGDNTELFLEEKEAENLKKAEEERQAALRIP # GMLKPSQLEDKDEEI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g177 ### # start gene g178 Scaffold_1 AUGUSTUS gene 878668 879522 0.99 - . g178 Scaffold_1 AUGUSTUS transcript 878668 879522 0.99 - . g178.t1 Scaffold_1 AUGUSTUS stop_codon 878668 878670 . - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_1 AUGUSTUS CDS 878668 879522 0.99 - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_1 AUGUSTUS start_codon 879520 879522 . - 0 transcript_id "g178.t1"; gene_id "g178"; # protein sequence = [MSSETSSSLSSLARSKLHQCNLHRWVLLKNSIINALPVASTSSTTDYADAGLPQAEVEDEEISTEDTDSFMFPDAGKL # VDSSGRDNASEAQWLDSLLETLGDDEEDDFGADSGSVSQIDDDYDQMLSPLPSPMSSSDDLINDSYLSSSFSYPYLAPYPPFHPPLINPYHFDSTSAS # SPYVDPLPYYELDDDVPDLPVPDAIEDTSDDESDSPLTPSGQSSSSLTLIDPAAIPLPADRPRIVSRAALHIFIDSDDSSFYPYELGPDPLPFSDDFR # SPYNMYQQEC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g178 ### # start gene g179 Scaffold_1 AUGUSTUS gene 880062 880611 0.62 - . g179 Scaffold_1 AUGUSTUS transcript 880062 880611 0.62 - . g179.t1 Scaffold_1 AUGUSTUS stop_codon 880062 880064 . - 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_1 AUGUSTUS CDS 880062 880463 0.82 - 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_1 AUGUSTUS CDS 880522 880611 0.62 - 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_1 AUGUSTUS start_codon 880609 880611 . - 0 transcript_id "g179.t1"; gene_id "g179"; # protein sequence = [MSKLRLAEYHFRKAVEIHPDNAVLLGCVGMVAERRGDREGARAFFDKAVGISPDNALVRYRRAKILISAKAYKVSDRV # NTCYKNSSVHTQAAIKDLEHLRNSSPEESNVVFQLAKVYRLVGDEVKSAQLLAIARDISPKSMGKIKKLLDTKKDDGGDDKMDEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g179 ### # start gene g180 Scaffold_1 AUGUSTUS gene 883954 884965 0.28 - . g180 Scaffold_1 AUGUSTUS transcript 883954 884965 0.28 - . g180.t1 Scaffold_1 AUGUSTUS stop_codon 883954 883956 . - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_1 AUGUSTUS CDS 883954 884280 0.47 - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_1 AUGUSTUS CDS 884375 884965 0.59 - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_1 AUGUSTUS start_codon 884963 884965 . - 0 transcript_id "g180.t1"; gene_id "g180"; # protein sequence = [MDRYFSTPTSFIALQPLSTKDLPFLTAVLVAFTPPHTSTSSMTFPADSEIFFDLVQADLECLEESCSLIESLSLDVED # VRLCLALGFKTPSEHPTGSSLRSILDFIEKGEYPSLWANAPDDFDVPRKQKAFDMCRAALIKTVVEVAGEEAAEMSLWDDSEGRAGGEFVVRMVEWLK # GYVIDMDAGKGAFFDRSDWQHNATVLLSPPHYLAPALSSQHLLSISTDIKVKHGVLGLLKHIAQAGPPGSDIHVILGRAGLIQSICDSGVWDEKTDGM # AEVLQVSAIGVVKHMCNTNGWIVSFNLHLVC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g180 ### # start gene g181 Scaffold_1 AUGUSTUS gene 890392 890849 0.58 + . g181 Scaffold_1 AUGUSTUS transcript 890392 890849 0.58 + . g181.t1 Scaffold_1 AUGUSTUS start_codon 890392 890394 . + 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_1 AUGUSTUS CDS 890392 890692 0.58 + 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_1 AUGUSTUS CDS 890818 890849 0.66 + 2 transcript_id "g181.t1"; gene_id "g181"; Scaffold_1 AUGUSTUS stop_codon 890847 890849 . + 0 transcript_id "g181.t1"; gene_id "g181"; # protein sequence = [MYSHPDDFIPFLPSTSGEDGPGALNAGIISPKGFEYYCQAIRDTSEWGGEPEILALSRAFNVPIHVIQSGQPPIVIHN # PTGTPNDGDVRDKRVVRISYHRQYPELNTPKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g181 ### # start gene g182 Scaffold_1 AUGUSTUS gene 890916 891239 1 - . g182 Scaffold_1 AUGUSTUS transcript 890916 891239 1 - . g182.t1 Scaffold_1 AUGUSTUS stop_codon 890916 890918 . - 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_1 AUGUSTUS CDS 890916 891239 1 - 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_1 AUGUSTUS start_codon 891237 891239 . - 0 transcript_id "g182.t1"; gene_id "g182"; # protein sequence = [MGPIVVAGPGPTEPQAQSSPVAPLPPAKTDVDTSALPTQSSQLISPTQDDVANDQDETEEDDEPPHSRQASNLDPYSN # LDNAFGGYLADEPRPMASRQHDDDDDLLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g182 ### # start gene g183 Scaffold_1 AUGUSTUS gene 897555 897908 0.46 - . g183 Scaffold_1 AUGUSTUS transcript 897555 897908 0.46 - . g183.t1 Scaffold_1 AUGUSTUS stop_codon 897555 897557 . - 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_1 AUGUSTUS CDS 897555 897908 0.46 - 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_1 AUGUSTUS start_codon 897906 897908 . - 0 transcript_id "g183.t1"; gene_id "g183"; # protein sequence = [MPSWAYDAVVENVMFTRNVLAMNPDIMNADGSVNLASIGSTPMMVPPDVGSALNAASSPSSDSSSTSTASSVASSSAS # SASSTSSPVGASSTNGAMSVTSSKALVGAVVLAVTFFAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g183 ### # start gene g184 Scaffold_1 AUGUSTUS gene 898868 899233 0.21 + . g184 Scaffold_1 AUGUSTUS transcript 898868 899233 0.21 + . g184.t1 Scaffold_1 AUGUSTUS start_codon 898868 898870 . + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_1 AUGUSTUS CDS 898868 899233 0.21 + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_1 AUGUSTUS stop_codon 899231 899233 . + 0 transcript_id "g184.t1"; gene_id "g184"; # protein sequence = [MVLVESIIMVLVESIIMVLLDSIIMVLLESIIDIDVSEQSPLEQPEEIIELEDEQSPLLQLESEDEDEQSPLLHPLDA # ADDDEPEQSPFVQALVELELYGRADAKPDKRATAIKDLGRTML] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g184 ### # start gene g185 Scaffold_1 AUGUSTUS gene 904553 905771 0.49 + . g185 Scaffold_1 AUGUSTUS transcript 904553 905771 0.49 + . g185.t1 Scaffold_1 AUGUSTUS start_codon 904553 904555 . + 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_1 AUGUSTUS CDS 904553 905075 0.53 + 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_1 AUGUSTUS CDS 905170 905771 0.61 + 2 transcript_id "g185.t1"; gene_id "g185"; Scaffold_1 AUGUSTUS stop_codon 905769 905771 . + 0 transcript_id "g185.t1"; gene_id "g185"; # protein sequence = [MGKSIRRRFKSVTGVLTRRSMSISYSANRTRDTGFPFEASELKKKPRGSMSLDSKTVMRPLQSSQNGLLRTTLNSPSI # HPLELPESLSETETQHTEIAFIFPVQSPSPHAAAIDQFIPEDQMLSPIIPFSDSILTESLIDFVVPQFLQQGTPLLKISKKRHKPIQFVFRLDADQVA # VENIKEIRTGQAALHHITQLQCTPVEDYLPRWLTLIYLGPSPSKARSKPNLSPLPLGSPKSNYSVHTYKTLHLVASSHLVIQLWERTLRSMVALRVSL # TSGLGFGGGMNSDRIMEETRQALWERSFWTAAGENMRSRFGSNADWSVGEGDESLELSGAHEGQRLTFNEMRALCERLNVRMSEKEVRRLFNVCGQMY # RM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g185 ### # start gene g186 Scaffold_1 AUGUSTUS gene 907373 908566 0.54 + . g186 Scaffold_1 AUGUSTUS transcript 907373 908566 0.54 + . g186.t1 Scaffold_1 AUGUSTUS start_codon 907373 907375 . + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_1 AUGUSTUS CDS 907373 908566 0.54 + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_1 AUGUSTUS stop_codon 908564 908566 . + 0 transcript_id "g186.t1"; gene_id "g186"; # protein sequence = [MLHKVRGRGKPDSSPPPSSYSPRRPIKKALASGHSSTSSVASSKTRMRMSPDLLSLLVYTVGVKYRGINKKEVYRSEE # MFSLSENMANKMLKVGMIDLIKHTRGHLVRIYPKGTRVRSTNYQPHRYWSAGAQLVAINWQTVGKLPGTAFFSAETYQRSDLGYMINHAMFQRNGGCG # YLLKPLPLRMPHKGLLSKQTQHYLELTIVSAQHLPAPKDASGKDVSESSPVNPYVQVTIHVPDWPTPPSVSANSIASGLVSANDAVSAVLSQGSGPPS # PASGYFPTNPRFPGSTSYCTSVVKNNGFNPVWEENMRIPFTCVGDMKDLIYVNFAVRHTEREDVEPLAQFFASLGCLQHGMCFHWKLDLANGVVSSGY # RHLPLHDSQMSQYLFSTLFVRIDIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g186 ### # start gene g187 Scaffold_1 AUGUSTUS gene 910692 912643 0.28 + . g187 Scaffold_1 AUGUSTUS transcript 910692 912643 0.28 + . g187.t1 Scaffold_1 AUGUSTUS start_codon 910692 910694 . + 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_1 AUGUSTUS CDS 910692 911840 0.46 + 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_1 AUGUSTUS CDS 911899 911993 0.42 + 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_1 AUGUSTUS CDS 912244 912643 0.38 + 1 transcript_id "g187.t1"; gene_id "g187"; Scaffold_1 AUGUSTUS stop_codon 912641 912643 . + 0 transcript_id "g187.t1"; gene_id "g187"; # protein sequence = [MSAPPNVSPSSSPAKSSFIPTFSPPQSKFEPEIPEFDNSRLSSPPPRTSSQWKFVSKPYTPPSRSSRRQEVQYEDVEV # PLRDEDEPQSSFPDPVPMKLVAELDRDAGEISEIDLPNMESEGSDDADEQNAVIQQHIADEGTIVKLSRQSLLTEDTKPMSVLSRLLLLALVGVVSYF # TFEYKEESASIGYCDTGSSTNRVLEELKSTRSLIIECNNENRTTLYDHVLVLDSPPCPVVPIPLYPESCTPCPEHAICSGHTIACEKAYILKSPFLLS # FLPPIADPSKTTLSTSVSPSDIAWKVISIIFDGLPGFGNVAFPPSCVEDPRRKRHIGALGKGIEALLGQHRGSLLCNAEADMIIKDVDGGEARRWGMQ # VHELKEKMREGPQHVLPNFDDLFNEAVQQLVQWGGVLISEDANRRSKKKIESKRIASLVQIAIDALQHQELAHYTDPVSTPQPFLSSIQLRDLVLQEE # HSVTVRQKVWEKVEKIVEGNANVRANLEEVYGGDELRVWRWVGSTAGSIDGGRGIVKQNDSLELNSPSSFHEDMEEM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g187 ### # start gene g188 Scaffold_1 AUGUSTUS gene 918020 918865 0.54 + . g188 Scaffold_1 AUGUSTUS transcript 918020 918865 0.54 + . g188.t1 Scaffold_1 AUGUSTUS start_codon 918020 918022 . + 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_1 AUGUSTUS CDS 918020 918865 0.54 + 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_1 AUGUSTUS stop_codon 918863 918865 . + 0 transcript_id "g188.t1"; gene_id "g188"; # protein sequence = [MSTAPNYPEQTPRTTIIHRQEPPNCTQQLEHCEPQLDSLIGSMQSTFTSIAGIEQALAEETTAFVSDHKAQNRQRHQL # HKSVSVPLSSDYHSPATTIVTSEKPLAAPITPTKLYLFTDAMLPLIVNLDKLPGDGVAYLCLQLDVPKPQAISSLAKKSLSGFGVQLEATCPVTRSPF # TNYKCITQVWGVSSDLNYSARTIGFPGTKQEPLAASPYMLRREVLVAQTPHKISEDQVPMSCLARQEAVVTLSEQALSRSSNRRLMMLYFPESALSSC # QLLEQGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g188 ### # start gene g189 Scaffold_1 AUGUSTUS gene 924475 924888 1 + . g189 Scaffold_1 AUGUSTUS transcript 924475 924888 1 + . g189.t1 Scaffold_1 AUGUSTUS start_codon 924475 924477 . + 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_1 AUGUSTUS CDS 924475 924888 1 + 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_1 AUGUSTUS stop_codon 924886 924888 . + 0 transcript_id "g189.t1"; gene_id "g189"; # protein sequence = [MDGPPPQEEDFSSIPVAERLAHKNWKARVSAYETLLKTFQNTASDTDPAFKPYTNNPDLLKRIATDSNAVAQEKAIEC # LVAYVKFAGETAAKTREVVLPALVDKCYGSSRAGTKANALELTLQYVEIENSGTGVVVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g189 ### # start gene g190 Scaffold_1 AUGUSTUS gene 925263 926884 0.16 + . g190 Scaffold_1 AUGUSTUS transcript 925263 926884 0.16 + . g190.t1 Scaffold_1 AUGUSTUS start_codon 925263 925265 . + 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_1 AUGUSTUS CDS 925263 925404 0.9 + 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_1 AUGUSTUS CDS 925488 925840 0.27 + 2 transcript_id "g190.t1"; gene_id "g190"; Scaffold_1 AUGUSTUS CDS 925906 926385 0.59 + 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_1 AUGUSTUS CDS 926441 926884 0.89 + 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_1 AUGUSTUS stop_codon 926882 926884 . + 0 transcript_id "g190.t1"; gene_id "g190"; # protein sequence = [MEKEGKGKGTLKPERLTRAQAREAEATAENDGDGDNEQTLDGAGDDVEPEDIVSKLPASLSTALTSSKWKERKEVLDE # LQAVLNATPRIKDAPALGDLAKSLAARVQADANINCVMTAAACLEALAKGMSASFSRFRETVVPPMLERLKERKATVTDAIGTALDATTLSDIIPDLG # PALGHKNPQVKEGTLKFLRRCLAISRTPIQPPQVKPLAETLASILEDSFEGCRNEAANCLGTLMKMVGERSLNAVIDSLADVRKAKIKEAFEKATVKC # KVGGAAPPTMKPAAPLAKKAPPKIAPPMKEELLIDDVEPPKKVAKPPARLMKAKPSVPSGTSSVPPSAPPPKKPPPATGAKPAKSTAPAAPGALDTFK # YKHTPEDAETLAADLITASILTDLGDANWKTRLAALDEMSAWLDGVIVNVDSEVMIRLLAKKGWAEKNFQVNFPLTSNSNLFKSDSEYRFQRKYTVSA # LC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g190 ### # start gene g191 Scaffold_1 AUGUSTUS gene 927273 929077 0.74 + . g191 Scaffold_1 AUGUSTUS transcript 927273 929077 0.74 + . g191.t1 Scaffold_1 AUGUSTUS start_codon 927273 927275 . + 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_1 AUGUSTUS CDS 927273 927294 0.76 + 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_1 AUGUSTUS CDS 927351 929077 0.9 + 2 transcript_id "g191.t1"; gene_id "g191"; Scaffold_1 AUGUSTUS stop_codon 929075 929077 . + 0 transcript_id "g191.t1"; gene_id "g191"; # protein sequence = [MKLFAGSGIKDLLEDLNPQLLNTISSEFDKVEGIAPSEPTRLSADVAAAPTATSQSGGTGSDALDELFPRVEIDALLK # GTTILADAKNEAWKTKKEALETLQGILDQGSNKRLKPNMGERCSSCCVDLSLTKLPGEIAQVLKARVVDTNKSVQLLALDIVARIATGMGKPFEKQNR # FFVIPIATVLADQKAPIRSAALTTLTCIANACETLDSLVPGIASGLETANPLQKATLLHWISDWFKEHEPTPGLDLSGWAAPIVSSLDDRNGDVRKGA # QALLPVLITCAGFDYVLQQTNSLKPASRTSAAPLIQAARPLAPVEPPAAPASKGKASAPPFQSQASSPRSESPAITENPPSKSVKLTGVRRKLPLGST # RRPESRSETPVEATASKLAKPPAGLKRPGPLASSAVKGAPIAASPASPSLSLPFFSSNVEARKSRCNRDPGRWINESGTTRKDLADLLCSQMEGHASK # EVISRLFSHDHNAINDHIAGINMLCDMYNLAQGADETVEAVCLANFDLPLKYASIKAHEPQPSLISKCLELVETVLAFLRNINYQLTDNEALCFIPTI # IFKVGPEFYPTIFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g191 ### # start gene g192 Scaffold_1 AUGUSTUS gene 929763 931641 0.21 + . g192 Scaffold_1 AUGUSTUS transcript 929763 931641 0.21 + . g192.t1 Scaffold_1 AUGUSTUS start_codon 929763 929765 . + 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_1 AUGUSTUS CDS 929763 930433 0.72 + 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_1 AUGUSTUS CDS 930949 931394 0.85 + 1 transcript_id "g192.t1"; gene_id "g192"; Scaffold_1 AUGUSTUS CDS 931445 931641 0.64 + 2 transcript_id "g192.t1"; gene_id "g192"; Scaffold_1 AUGUSTUS stop_codon 931639 931641 . + 0 transcript_id "g192.t1"; gene_id "g192"; # protein sequence = [MKGPTTSHLPGPSQSSTPLSPTIANRKPTLPSRLGRPKSHFSHPSDSHLTLTNEKPLLDKNINGGDEDPDDLQPAGSD # DITLTISSILSSDPSRSVDALKKIQKILSVGPEGCNSSPLYRDLAEHTEGLIETITLQMAHIFERPEDIASEENFRLAKHLIQTLNNFCDHPLLAESL # TIDILTSLLEELTLRLLETDDSSVKQVKDLSRFINMIILRLFATGRRIAHATSEPPQNGHDDLDRRSRPVSTTSSRPISPQTASSATSGGLRQSPGRR # DSPLPASGNGYAPVEEPDPDAQLLVIIGHISSETTGALHKEGITELHHFLKAYPHKRPRVEKMLESTGAAFRKYINRALASRAAEDQERGVAVADTLS # KLESNHQEPPSSPIHSDSAPQSPRRVSGGAAEDKLSRLHDIFQYRSSTVSNGSSQGPAPTRTSAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g192 ### # start gene g193 Scaffold_1 AUGUSTUS gene 945638 945901 0.97 - . g193 Scaffold_1 AUGUSTUS transcript 945638 945901 0.97 - . g193.t1 Scaffold_1 AUGUSTUS stop_codon 945638 945640 . - 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_1 AUGUSTUS CDS 945638 945901 0.97 - 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_1 AUGUSTUS start_codon 945899 945901 . - 0 transcript_id "g193.t1"; gene_id "g193"; # protein sequence = [MLSQKEANSSAGVFRAVSPGVSDIDEGPTVPVDRSRAYLESVQRWMNDVVDSNHVMEPVDEPEPQPAENAAQHPPFDG # GEWLAPDGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g193 ### # start gene g194 Scaffold_1 AUGUSTUS gene 951687 952808 0.2 + . g194 Scaffold_1 AUGUSTUS transcript 951687 952808 0.2 + . g194.t1 Scaffold_1 AUGUSTUS start_codon 951687 951689 . + 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_1 AUGUSTUS CDS 951687 951832 0.2 + 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_1 AUGUSTUS CDS 951905 952808 0.53 + 1 transcript_id "g194.t1"; gene_id "g194"; Scaffold_1 AUGUSTUS stop_codon 952806 952808 . + 0 transcript_id "g194.t1"; gene_id "g194"; # protein sequence = [MASNRHRVASSHRDGQPFDTSERGKVTEQIHNRGLSTTINGNTLNKVRSASILATDSKRPQTIVTLPTFPTVSQEEAK # GRAERFVSMFRDVAMYVGTVTGTLLTPMLNFHCRVSSQIIQDTVLLDQEERKLQTFNEISSTLAKISASSAASVAGPIADILLAHAQSKERLDENFRL # LGAAWEKVFNSLMVEFSMGLENRLQAALASVKNEAEIVMNGIRVESNSLKRRSDRASMSPEPDRQRRRSRDHRTNEEHNGSYRRSRSSTRDRKRRKLA # PSSRSCSPDPGLDPKGEAHSSRNSIVRVSLDDILNQMKMKIDQQTNSLQQLSKENEEVPCNHIIFIHLRAERRSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g194 ### # start gene g195 Scaffold_1 AUGUSTUS gene 953484 956434 0.74 - . g195 Scaffold_1 AUGUSTUS transcript 953484 956434 0.74 - . g195.t1 Scaffold_1 AUGUSTUS stop_codon 953484 953486 . - 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_1 AUGUSTUS CDS 953484 954729 0.75 - 1 transcript_id "g195.t1"; gene_id "g195"; Scaffold_1 AUGUSTUS CDS 954804 956434 0.74 - 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_1 AUGUSTUS start_codon 956432 956434 . - 0 transcript_id "g195.t1"; gene_id "g195"; # protein sequence = [MRAHDNPSPPPQSPEIFNHLNLPTLSLPFPLVSTSEDTSDSSTPASPPSIFTPLPVSELTGDESGTLISFETSTFLSN # TLETPTRLGLPNNILHQSLTSDITPIAQPDMSLFHDTDLAPTDTVDEQSVADALVLSVDEVETINPESTSNDTQDPFEESSHKPFQRSTRPRRSTARY # SIRPETFEFDASDTDDPGPSDETKRDDSETKISSPRRKTITLVPNQVEMPEPLLFSQQPRSRSPIRKSALKNMRELGSLSPSSSTILKSLFPPAISPP # GEPPETEPTSTQPPSEQILTPARPTPPIRFTSPVRKASPKKFQLQPADLDNPNRTPARRIPIEAAVANGQVSVQKAARLMANGRTTTSSRPVFNIPST # DSPVRRVLLHDANPINSPTKHLLGSPMRSRSVEPNPVEPMRLNLKKRSESVEPATSKSQGKVSSRASPFSRSNLAERVPLPSKVNLSLHPAIPEEGQS # TKLHEKFQRPAARTGPAPVERSHLRQPTSKIPRIGLKPYARPPITSTSKSQEKTTTMRMVDSHKLQPSSNKVLRRSHTPSHVPTFSPTKQRDPVPGTP # LSLKRKRGPEASSPTKPTPVVLLSRRLAAPSPSPAKKSGVTKLRMVSESDGTLPDRSNAASSGTEGMKSAESTATRDNTNTLRPATTLRMVSDSDGVL # PDRFVVMPSVLQAVDEEKTTSSSPPSTVTTQSMDLPPQAQDEVTPSSDNIPDSSDPAEPQSSSPVETVRRTTRSSRNAAAAMKPVSSSRPPSARRKNI # PTFTDTGPFSGMTALALRTLTDSNTTKNKEYVTVLLKTEVVRREGARPESPGMNVKSISQKEKESKTLERNARADRRAKRDNSTELGTDENEAYEDED # CENDWASSPSDHKHTWGPGDEEDYQTPVQSKRLRLDEEISEDEYEKKRVKWDRGLYQEIYLDEIKPRTTHARITQESIQKGCLAPIAKVSCHAFFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g195 ### # start gene g196 Scaffold_1 AUGUSTUS gene 956498 956920 1 - . g196 Scaffold_1 AUGUSTUS transcript 956498 956920 1 - . g196.t1 Scaffold_1 AUGUSTUS stop_codon 956498 956500 . - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_1 AUGUSTUS CDS 956498 956920 1 - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_1 AUGUSTUS start_codon 956918 956920 . - 0 transcript_id "g196.t1"; gene_id "g196"; # protein sequence = [MRIQFKLNFESRSSNHYILNAFALPLASYLVMSNGDASSSGLLQLYTTDVSNNVQARIFSGPVDPPEKPIAASESNNY # LSPSPPSPSRRSPRLLKGPEPDYTDPNGGSVGAIVNQDEELFGLSRPLTPENEAIVQNGECQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g196 ### # start gene g197 Scaffold_1 AUGUSTUS gene 957185 959431 0.14 + . g197 Scaffold_1 AUGUSTUS transcript 957185 959431 0.14 + . g197.t1 Scaffold_1 AUGUSTUS start_codon 957185 957187 . + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_1 AUGUSTUS CDS 957185 958180 0.33 + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_1 AUGUSTUS CDS 958231 958578 0.26 + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_1 AUGUSTUS CDS 958667 959431 0.26 + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_1 AUGUSTUS stop_codon 959429 959431 . + 0 transcript_id "g197.t1"; gene_id "g197"; # protein sequence = [MQAAPRAPSPLRQFETRRGESTPGIDSDPHFRNSDSDDDSDDDREHDSAASVTQFAANFANKFGNFVGGMTSPSPSPS # PGPVMMSSSEIEREAQRERERGRREAERILQAENQRTSLENRVLAMLDSTRALPPPPSRSQTMPNPESSQPSSPSSNVSWWSAAKNRLTPTKDKDLTP # AQQVIIDVKRSEKDRERAEKEFQKEVKRLSKGKEKEWPAVAETKYSDPAFFNLNVPQTPTPQHRRTGSPTSPSPNPNSSPGRVLGSPSATGSPARSFT # APNLTPSPNRSTTSTGAGASPGRAEQPPLYAQFNPQGGLDVHLTLITIAKRQVPFLLFLEKWTVGHVRALEERMGDVERWLVDKEEREQRTTGKDNEA # EVTDSSSKEEGSNQVQDGDIRNEVQNLREEVLELQGRISELGREMAESSRERAFEKVMPEKLSSSKQSQSAQIRRSRVPSVRESTSPPLLRSLSRQTT # GSRLPYPTGDYAPIPLDAGAVMTGTFSPPVSPPGSLNSRTPTGKITSAISGVSANTNHTPSGIGLGLAIAAPSGAPGISSSASTYSTSYSNASFSSVS # SISPSTSPSPSPRPRGPQQSANVNASPSNASKGRVLPIPPSSAKDQQGMSTSPSGGRKRYTVALGTPITRASAMMAGDNGSDSSYVNGNTGNEEHGRL # PRKGSNSSIGRAFFSSSPVSVSRGEDVGGGGEERIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g197 ### # start gene g198 Scaffold_1 AUGUSTUS gene 967516 967920 0.75 + . g198 Scaffold_1 AUGUSTUS transcript 967516 967920 0.75 + . g198.t1 Scaffold_1 AUGUSTUS start_codon 967516 967518 . + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_1 AUGUSTUS CDS 967516 967920 0.75 + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_1 AUGUSTUS stop_codon 967918 967920 . + 0 transcript_id "g198.t1"; gene_id "g198"; # protein sequence = [MDHDDPISTFFPAEESVDLYAVLSVSKDSKLDEIKKSYRRLALKYHPDKHATASESAKSEASLKFQQVGFAYAVLSDE # KRRRRWDLTGKTDEGFDLAPGEDGWEAYFEQMFDRVTRGKLDEMKKEYQCMYDNCL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g198 ### # start gene g199 Scaffold_1 AUGUSTUS gene 968234 968626 0.74 + . g199 Scaffold_1 AUGUSTUS transcript 968234 968626 0.74 + . g199.t1 Scaffold_1 AUGUSTUS start_codon 968234 968236 . + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_1 AUGUSTUS CDS 968234 968626 0.74 + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_1 AUGUSTUS stop_codon 968624 968626 . + 0 transcript_id "g199.t1"; gene_id "g199"; # protein sequence = [MEVVKTGKRKGKGKGKGKDDREEKGEEDVSALQALILKKKQKNTDSFFDSLAAKYAEPAVKTKGKGKKRAKPVDDEEL # EESPKNVQKKAAPPPPDIDDAEFEKLQQKLFGDKAKDSSQSGGKKGKGRKAK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g199 ### # start gene g200 Scaffold_1 AUGUSTUS gene 968778 969197 0.81 - . g200 Scaffold_1 AUGUSTUS transcript 968778 969197 0.81 - . g200.t1 Scaffold_1 AUGUSTUS stop_codon 968778 968780 . - 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_1 AUGUSTUS CDS 968778 969197 0.81 - 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_1 AUGUSTUS start_codon 969195 969197 . - 0 transcript_id "g200.t1"; gene_id "g200"; # protein sequence = [MAPLPSTPPKKKDTNKTFSESPFAPHYQKTGAIVVEPFVAPVPASSPWTPVKTPRKWNPDEEDVFGAGWSERTPAHTT # QDDSDEEESEKKTTTGDAFEVAGQRRDFRREHQRARCNYSCPSKFRNRLCKIPLGFHNWSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g200 ### # start gene g201 Scaffold_1 AUGUSTUS gene 969461 970082 0.4 - . g201 Scaffold_1 AUGUSTUS transcript 969461 970082 0.4 - . g201.t1 Scaffold_1 AUGUSTUS stop_codon 969461 969463 . - 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_1 AUGUSTUS CDS 969461 969905 0.68 - 1 transcript_id "g201.t1"; gene_id "g201"; Scaffold_1 AUGUSTUS CDS 970009 970082 0.48 - 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_1 AUGUSTUS start_codon 970080 970082 . - 0 transcript_id "g201.t1"; gene_id "g201"; # protein sequence = [MTTKKKPLYTLVSGREKSPISGEPFTGYDNYLRDAFFYVQDQPAYQLDDIDRVDTEARQKAKHRINVNDPIISTVLES # LRRFFSNTPEHNIALTGVLSTLAIHPDRSLAGWLTFASNDSTPSNNDDIDAGLDANSDGDDRSIDFVLRKNSPTTIAFCRRLAWTRNRVPSCML] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g201 ### # start gene g202 Scaffold_1 AUGUSTUS gene 970433 971407 0.74 - . g202 Scaffold_1 AUGUSTUS transcript 970433 971407 0.74 - . g202.t1 Scaffold_1 AUGUSTUS stop_codon 970433 970435 . - 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_1 AUGUSTUS CDS 970433 971407 0.74 - 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_1 AUGUSTUS start_codon 971405 971407 . - 0 transcript_id "g202.t1"; gene_id "g202"; # protein sequence = [MIFFHDKHWYRSEPLFSLEEQDEDEEEEDEEESIANAVAEPHRPSSPTPSQTTVTSMPVSSVATKKPEYEFLLFNYLL # RFGHREGQIGEFARAGLLLLMDVAMSPGEPVHRLTGEETSSEATADPITDAALALAEYILDGDFSEVLGAGLGAVYSMLPSKLEFRPPTNADRSQETG # MVIGSMWLETEDEKEVLEVFRTKSWAMGVEDANSPDFKSRLDHFLKMLEFIQDVLRRNIIQEDVDASSLVGTAIVNSILDAVRRIFLENVLYPTILEC # SDADGSAVAVSYIDIMIRTLQDGQLADLWSTSSLVRITRKLDHVLALNPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g202 ### # start gene g203 Scaffold_1 AUGUSTUS gene 973415 974889 0.32 + . g203 Scaffold_1 AUGUSTUS transcript 973415 974889 0.32 + . g203.t1 Scaffold_1 AUGUSTUS start_codon 973415 973417 . + 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_1 AUGUSTUS CDS 973415 973570 0.41 + 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_1 AUGUSTUS CDS 973645 974128 0.81 + 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_1 AUGUSTUS CDS 974216 974889 0.95 + 2 transcript_id "g203.t1"; gene_id "g203"; Scaffold_1 AUGUSTUS stop_codon 974887 974889 . + 0 transcript_id "g203.t1"; gene_id "g203"; # protein sequence = [MRGVLEEELRKQRLKQSSPDDNSHDISTSPHVRQISVPAITLEHQGPLRAQLNRISGLQRNITQCLDSSAQALELERE # LRAEVEEYSRSLAEENSRLQDKIRDLQKAERQNDTAVPEIKPALDDVSDALKDTTKRQESLTHAAVLFEPHIPHHDLCGDVQNISVDVRNVTLSPVVD # GRSDEFQARDETALKARHRELLFNQQFRVSSTKVRTCLAPPTITGDLPGMSQSVMGNTSPSALPRRIVTPVNHGHNIKSSSATAPARYSRPPLLGTSN # PLAAEAQIPTKRDSIVLKPLHLVSSVEVTPKRLTLYAPSRPMSVVEPSPTFPPAPPSTPKKDQTTQGKPNYWFRNSSTASADYPCTPDSSSSTLVASS # PAPASVDKGKSNVIANTLLRKPSLDSKLKATTTLFVSSSFYQIRLEFLADSGRSLTCTGIVKNTN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g203 ### # start gene g204 Scaffold_1 AUGUSTUS gene 976066 977004 0.63 + . g204 Scaffold_1 AUGUSTUS transcript 976066 977004 0.63 + . g204.t1 Scaffold_1 AUGUSTUS start_codon 976066 976068 . + 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_1 AUGUSTUS CDS 976066 976351 0.73 + 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_1 AUGUSTUS CDS 976406 977004 0.76 + 2 transcript_id "g204.t1"; gene_id "g204"; Scaffold_1 AUGUSTUS stop_codon 977002 977004 . + 0 transcript_id "g204.t1"; gene_id "g204"; # protein sequence = [MKYCCLFFSRGCCPYGWECEYLHTLPDPSTALPDSSKDCFARDKFADYRDDMGGVGSFNRQNRTLYVGRIKETGTGLE # TEEVVRRHFKEFGEIEHDDSETGWAVKVLQYRSVAFVTYKSEFHAQFAKEAMACQSLDNDEILNVRWATEDPNPVSKVNEKRRLEDMGQAVIREKMDP # RVVDAMRTIRALEDGDVLDEDGNLLENGPMDADKEDDEGSDRGAKRRKLDVDDRVSISPPPQQELPKLTGLLSADTMDSLKYFSEIRKRNGIQPSTAV # RITKPSAGLGLGDYGSDDED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g204 ### # start gene g205 Scaffold_1 AUGUSTUS gene 977377 978727 0.11 - . g205 Scaffold_1 AUGUSTUS transcript 977377 978727 0.11 - . g205.t1 Scaffold_1 AUGUSTUS stop_codon 977377 977379 . - 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_1 AUGUSTUS CDS 977377 977987 0.5 - 2 transcript_id "g205.t1"; gene_id "g205"; Scaffold_1 AUGUSTUS CDS 978445 978727 0.24 - 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_1 AUGUSTUS start_codon 978725 978727 . - 0 transcript_id "g205.t1"; gene_id "g205"; # protein sequence = [MDLDPPSSPVNNSDEDIIQPKSSARKTSAAALPRAHITISSDEGNTVEELNDDQEESVPGSESESESESEEDNRDSDV # DVIGDSIGIESMPVPSTREAVRVDTTVQEVQEVPGNQSITSLSLENELDSDDDAAVNVRMSPATPVPNTPTPAMSPPILDLSSPSLASITFSPFRGRS # VTFAEEAPPSTLDSRYPPPPPANDPLGPAAQRPYLPATSDDGKIVIQYSCRSGGPYLYDLLGLLPLDEFGVLSWLVLDREAEIFENEDISDEWKVMHA # LWGRWIMMNRYRVLKMRNEVTSY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g205 ### # start gene g206 Scaffold_1 AUGUSTUS gene 982407 983377 0.37 - . g206 Scaffold_1 AUGUSTUS transcript 982407 983377 0.37 - . g206.t1 Scaffold_1 AUGUSTUS stop_codon 982407 982409 . - 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_1 AUGUSTUS CDS 982407 983007 0.8 - 1 transcript_id "g206.t1"; gene_id "g206"; Scaffold_1 AUGUSTUS CDS 983217 983377 0.38 - 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_1 AUGUSTUS start_codon 983375 983377 . - 0 transcript_id "g206.t1"; gene_id "g206"; # protein sequence = [MSRRKFKFAISMQRFSKFNKEEQENAEFLLRAYPDLQIAYLDEEPGPKGSEARLNILGEFEEYSVSSQSPYAQWGHKE # FKKAPVAIVGTREYIFSENIGVLGDIAAGKEQTFGTMTARALAWIGGKLHYGHPDFLNATFMNTRGGVSKAQKGLHLNEDIFAGMNAFGRGGRIKHSE # YYQCGKGRDLGFGTILNFQTKIGTGMGEQMLSREYYYLGTQLPIDRFLTFYYGHPGFHINNILVIYSIQIFMLTCTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g206 ### # start gene g207 Scaffold_1 AUGUSTUS gene 987881 988819 0.79 + . g207 Scaffold_1 AUGUSTUS transcript 987881 988819 0.79 + . g207.t1 Scaffold_1 AUGUSTUS start_codon 987881 987883 . + 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_1 AUGUSTUS CDS 987881 988819 0.79 + 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_1 AUGUSTUS stop_codon 988817 988819 . + 0 transcript_id "g207.t1"; gene_id "g207"; # protein sequence = [MREQRRERSSLPSSSRRAIWSEFDNSDRSKKKRRLTNTETTTTQSPSGHFLLMLYRTPPPWHHAEPLAPTAMHHQKSN # RPQTSRPADVTNAATVNRSRVKLQMVADLQFSVGTAARNRRLGDPMANFDGVKSSYDESTRLRSKYATTTVQPILRGKNPFRRSNTEATVQSTLSEGC # STDPVLVDSSSKEVREQTHTLSIATAQSKQKTPTYPRPFLKPISSVRVPELPPEEMRKLKKSMVKQPPSDFISRKSLPIGTDIRRPTADALSYRKRNP # DGDSKMMQLPKDGKSFRSGMGTNAERKMVFDWKSWGST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g207 ### # start gene g208 Scaffold_1 AUGUSTUS gene 999623 1000516 0.41 + . g208 Scaffold_1 AUGUSTUS transcript 999623 1000516 0.41 + . g208.t1 Scaffold_1 AUGUSTUS start_codon 999623 999625 . + 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_1 AUGUSTUS CDS 999623 1000516 0.41 + 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_1 AUGUSTUS stop_codon 1000514 1000516 . + 0 transcript_id "g208.t1"; gene_id "g208"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKD # LLGIKLESLIPRELTKNNSKWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g208 ### # start gene g209 Scaffold_1 AUGUSTUS gene 1000600 1001148 0.24 + . g209 Scaffold_1 AUGUSTUS transcript 1000600 1001148 0.24 + . g209.t1 Scaffold_1 AUGUSTUS start_codon 1000600 1000602 . + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_1 AUGUSTUS CDS 1000600 1001148 0.24 + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_1 AUGUSTUS stop_codon 1001146 1001148 . + 0 transcript_id "g209.t1"; gene_id "g209"; # protein sequence = [MTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMP # EGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQD # SSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g209 ### # start gene g210 Scaffold_1 AUGUSTUS gene 1001178 1002581 0.82 + . g210 Scaffold_1 AUGUSTUS transcript 1001178 1002581 0.82 + . g210.t1 Scaffold_1 AUGUSTUS start_codon 1001178 1001180 . + 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_1 AUGUSTUS CDS 1001178 1002581 0.82 + 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_1 AUGUSTUS stop_codon 1002579 1002581 . + 0 transcript_id "g210.t1"; gene_id "g210"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQKKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g210 ### # start gene g211 Scaffold_1 AUGUSTUS gene 1004484 1006948 0.49 + . g211 Scaffold_1 AUGUSTUS transcript 1004484 1006948 0.49 + . g211.t1 Scaffold_1 AUGUSTUS start_codon 1004484 1004486 . + 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_1 AUGUSTUS CDS 1004484 1005414 0.53 + 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_1 AUGUSTUS CDS 1005666 1006948 0.86 + 2 transcript_id "g211.t1"; gene_id "g211"; Scaffold_1 AUGUSTUS stop_codon 1006946 1006948 . + 0 transcript_id "g211.t1"; gene_id "g211"; # protein sequence = [MPEEHIAQVVLEWPPCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLESKDAHVKSSVGILVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRSCKECQNRQMKLLK # APPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGI # RISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQ # ALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFR # VLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g211 ### # start gene g212 Scaffold_1 AUGUSTUS gene 1007205 1007770 0.56 - . g212 Scaffold_1 AUGUSTUS transcript 1007205 1007770 0.56 - . g212.t1 Scaffold_1 AUGUSTUS stop_codon 1007205 1007207 . - 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_1 AUGUSTUS CDS 1007205 1007421 0.88 - 1 transcript_id "g212.t1"; gene_id "g212"; Scaffold_1 AUGUSTUS CDS 1007481 1007631 1 - 2 transcript_id "g212.t1"; gene_id "g212"; Scaffold_1 AUGUSTUS CDS 1007713 1007770 0.64 - 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_1 AUGUSTUS start_codon 1007768 1007770 . - 0 transcript_id "g212.t1"; gene_id "g212"; # protein sequence = [MFLLVSARFIATDSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANCILKSRQDS # GSDSSASDASFATAQSIPTTGSEDTVVTPTEMAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g212 ### # start gene g213 Scaffold_1 AUGUSTUS gene 1009678 1010335 0.26 - . g213 Scaffold_1 AUGUSTUS transcript 1009678 1010335 0.26 - . g213.t1 Scaffold_1 AUGUSTUS stop_codon 1009678 1009680 . - 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_1 AUGUSTUS CDS 1009678 1010225 0.68 - 2 transcript_id "g213.t1"; gene_id "g213"; Scaffold_1 AUGUSTUS CDS 1010287 1010335 0.26 - 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_1 AUGUSTUS start_codon 1010333 1010335 . - 0 transcript_id "g213.t1"; gene_id "g213"; # protein sequence = [MDALNALHKASTSSTHNLANSLRRATDLNDQLKQIGSLFDTTRELFLRSILDLQNAGEDPVVVLEALKAAEPNRRAIN # LNEWTLMATLFRWPSPFNLSGLDFDNRTPGEWIELLCSIHSGESTAHIDKHGHLVEASPPPDSATEALEGLKEVERGSADEGASSPVGGSVPMELDLP # TIESLAERTLSPEKGAESAQIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g213 ### # start gene g214 Scaffold_1 AUGUSTUS gene 1018520 1019158 0.57 + . g214 Scaffold_1 AUGUSTUS transcript 1018520 1019158 0.57 + . g214.t1 Scaffold_1 AUGUSTUS start_codon 1018520 1018522 . + 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_1 AUGUSTUS CDS 1018520 1019158 0.57 + 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_1 AUGUSTUS stop_codon 1019156 1019158 . + 0 transcript_id "g214.t1"; gene_id "g214"; # protein sequence = [MSPFELTYGYLPLFNIPVGQRSGIPAVETAYGYSEKPDRTGAALHLGKKQQKEGYERGKRKAHQFKVGDFVWLSAEDI # NLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPISLDRIHPVFHVDKLYPWKGNTINGEIPPPPEPVYLEDEDEPEYEVEEILDSRVRWKRLEYLVKW # KGYDAGHNSWEPAPNLSRAPKIVRAFHKKHPTAAKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g214 ### # start gene g215 Scaffold_1 AUGUSTUS gene 1022374 1022973 0.48 - . g215 Scaffold_1 AUGUSTUS transcript 1022374 1022973 0.48 - . g215.t1 Scaffold_1 AUGUSTUS stop_codon 1022374 1022376 . - 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_1 AUGUSTUS CDS 1022374 1022683 0.48 - 1 transcript_id "g215.t1"; gene_id "g215"; Scaffold_1 AUGUSTUS CDS 1022810 1022973 0.54 - 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_1 AUGUSTUS start_codon 1022971 1022973 . - 0 transcript_id "g215.t1"; gene_id "g215"; # protein sequence = [MSSPNSDEPTLPPPTTPVQNGQQYSQQDSGNQQYANYYIPPKAILECKEDWELEANAGPPTMGGQDQHEIGHARPRPR # PRMNPVDFTLPDSFGAPFQPNTASGYQPPPDPRPLSSDTFPSPSELAASAGNGQQGATKQKKKKARMAKRLRITELQSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g215 ### # start gene g216 Scaffold_1 AUGUSTUS gene 1026913 1027971 0.42 + . g216 Scaffold_1 AUGUSTUS transcript 1026913 1027971 0.42 + . g216.t1 Scaffold_1 AUGUSTUS start_codon 1026913 1026915 . + 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_1 AUGUSTUS CDS 1026913 1026917 0.88 + 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_1 AUGUSTUS CDS 1027029 1027407 0.96 + 1 transcript_id "g216.t1"; gene_id "g216"; Scaffold_1 AUGUSTUS CDS 1027477 1027971 0.48 + 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_1 AUGUSTUS stop_codon 1027969 1027971 . + 0 transcript_id "g216.t1"; gene_id "g216"; # protein sequence = [MPFPQANVPPEPALATVNDLGSAAASKGKAHKVKLAPNVTWSPLPTQLKVNDAEDRIFIREFILRFSGIPGMALTRNQ # LEELEFIAGTHDLSDDENDYVDWVSETCVKSLVISLIGVLAAEEDSSATLVMKKAIQDVRNSGANLTKIWTALSSLRAALGRPEEVSVGKLQAEEPSD # DDDESSEDRIILEYPDPLPAPANHEHNVRSTRFAVADISLVVHSAQMIPVILGLIDAVMECHAIRVELDNGTKEGRKRFRESREVIKLENESWKSLEE # SREPNVTVGTLSNSCVKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g216 ### # start gene g217 Scaffold_1 AUGUSTUS gene 1031477 1031797 0.33 - . g217 Scaffold_1 AUGUSTUS transcript 1031477 1031797 0.33 - . g217.t1 Scaffold_1 AUGUSTUS stop_codon 1031477 1031479 . - 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_1 AUGUSTUS CDS 1031477 1031797 0.33 - 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_1 AUGUSTUS start_codon 1031795 1031797 . - 0 transcript_id "g217.t1"; gene_id "g217"; # protein sequence = [MGPSMDLVLRRHTNPDPELLKQAMRRPKLKKTDVEKGLGKKRKNLDVDEMGDLRGRVHVGKQDLSRLQTRKMKGLKAG # AFEDGGDDGAGDSGSDDDKASKKKRKLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g217 ### # start gene g218 Scaffold_1 AUGUSTUS gene 1032162 1032591 0.48 - . g218 Scaffold_1 AUGUSTUS transcript 1032162 1032591 0.48 - . g218.t1 Scaffold_1 AUGUSTUS stop_codon 1032162 1032164 . - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_1 AUGUSTUS CDS 1032162 1032431 0.85 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_1 AUGUSTUS CDS 1032490 1032591 0.53 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_1 AUGUSTUS start_codon 1032589 1032591 . - 0 transcript_id "g218.t1"; gene_id "g218"; # protein sequence = [MEARQPKEVEDARIAIFVKGTKTGEVLNGVMKDMMALKRPDAISFSKKNVIHPLDAQNTASGSSSMSSLEFWSSKNDA # SMFVIGQTSKKRPNDLTFVRMFDGKVLDIVEAGVENYVSMESVPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g218 ### # start gene g219 Scaffold_1 AUGUSTUS gene 1033055 1034326 0.25 + . g219 Scaffold_1 AUGUSTUS transcript 1033055 1034326 0.25 + . g219.t1 Scaffold_1 AUGUSTUS start_codon 1033055 1033057 . + 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_1 AUGUSTUS CDS 1033055 1033099 0.4 + 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_1 AUGUSTUS CDS 1033169 1033307 0.43 + 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_1 AUGUSTUS CDS 1033383 1034326 0.35 + 2 transcript_id "g219.t1"; gene_id "g219"; Scaffold_1 AUGUSTUS stop_codon 1034324 1034326 . + 0 transcript_id "g219.t1"; gene_id "g219"; # protein sequence = [MLAQRKSRYFLDGQRLSLIDSFEIEVFISGFATSRRSADVISRSQRAFLKLAKGKGELLTSSTTGVLLEPRTLSHSED # LLKSVKLPPRPEDISEDYEVQLLERKFQSLNGISEDADSLHSPVYSQSSSRASSVNDLTLHDNTPESSYLGTVVKNTAADELRKLHANLESRLQPFWS # SVVPNRTVRLRLYTSPNHISTPSNSSVSMDNGPVSIQDVVTAPDGSFQARFTVGWTDLANHPGAEHIAFGDPAEEHELLVAAELLPLPSPISSVASSA # ASSTTDFSSSSRPSKNNTTRSYQSNSPYDSSVTLPSIPPTTLRIPLTYSPVRVISDIDDTIKYSNVTGGARAVFHNVFVKELKDLVIPGMGSGMKRCG # RRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g219 ### # start gene g220 Scaffold_1 AUGUSTUS gene 1049786 1050373 0.8 - . g220 Scaffold_1 AUGUSTUS transcript 1049786 1050373 0.8 - . g220.t1 Scaffold_1 AUGUSTUS stop_codon 1049786 1049788 . - 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_1 AUGUSTUS CDS 1049786 1050373 0.8 - 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_1 AUGUSTUS start_codon 1050371 1050373 . - 0 transcript_id "g220.t1"; gene_id "g220"; # protein sequence = [MRNIEKQLDKASKLGFGRKRRTSKADRQARVAAAHAARRKQRLPPSPSKADNEEERKQPSHPLSKADSDEDKSKEKGN # FEKLVAETAELERTVDNLRKKSRYWKAKTMELRGKRRGWKRYEKERGGGAEEEEGSRGRGERNEQKIEDLEMELEREKKLHKIEIAEHEATCVELEET # YNNLRLQFDPIFERLRPFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g220 ### # start gene g221 Scaffold_1 AUGUSTUS gene 1061136 1061453 0.29 + . g221 Scaffold_1 AUGUSTUS transcript 1061136 1061453 0.29 + . g221.t1 Scaffold_1 AUGUSTUS start_codon 1061136 1061138 . + 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_1 AUGUSTUS CDS 1061136 1061453 0.29 + 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_1 AUGUSTUS stop_codon 1061451 1061453 . + 0 transcript_id "g221.t1"; gene_id "g221"; # protein sequence = [MDTFYFRVLLGYMAAKEIIGNYNTKTYDEIMKALELAKAGKTNAAVAEEEPGDDVSSSLPSGGGSTQPAHDSLGTNSQ # GGGATNLPPRISVLSMLNARVNTLPNH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g221 ### # start gene g222 Scaffold_1 AUGUSTUS gene 1067116 1069414 0.48 - . g222 Scaffold_1 AUGUSTUS transcript 1067116 1069414 0.48 - . g222.t1 Scaffold_1 AUGUSTUS stop_codon 1067116 1067118 . - 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_1 AUGUSTUS CDS 1067116 1067164 0.48 - 1 transcript_id "g222.t1"; gene_id "g222"; Scaffold_1 AUGUSTUS CDS 1067247 1069414 0.48 - 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_1 AUGUSTUS start_codon 1069412 1069414 . - 0 transcript_id "g222.t1"; gene_id "g222"; # protein sequence = [MLQETRIQPNSTIRSPTGFTAHALNRRRSADNIENPWGGVATLVRDGLESRVRVDLSSPDILAVQVNGIVLFNTYIIP # ESSRTDWTQWADLHPWDALAQSIHLATTLDIPFVISGDINARTGTSIPYQEHAIRTSSDSVVSTRGRRLLELCSELRLTIMNGCSAIPGTHSSSTSFQ # HRHSMDGTPTTYSSVIDYVLASPLASFFISELAVSTETKWSDHAYLSWDLLVPGPELTRLPPTQHPRPHIMIPIISEIDHLQQQLLHSQKLTHPQRLL # KLYGHSSTSSSSFPLKVFTDSSCLRNNTAAACAGLGIYIGPNHHLNLSARILGPQRNNRAELYAILVTIQRTSAHRQLEIYTDSSYAIQSIVYNAPEN # AQCGWDCPNGDLLNTLSQWISARTATIVFTHVRAHRGIIQNELADQLAKAGACLPLPHEGSELDFISCPIPSPHLPQLLSNIPKVSTSLPDPRSLAPP # PQLVHTPSAVCHRGRTHRRELEDTNLSRLQSAAAAGGAAFWKFYKSLSNSDKPLPRVTLEQLTNCFIPRMNPPDPRTTSFDPQILQQETNRANAIPDP # SPPSAFPSFNSVICENDIATIKSYLKRTTHSDSTGADLITYSIIQDIDNDRLASFFDRAFQLKEFPTSWLVSLIVAIPKPGKDSVDPNNYRAVALESC # ILKFASLLLHLKLSQALEEAHILPASQNGFRAGYRTNNNVFILRTLIEKAKSLGDPLSPANTLTGSVPSTAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g222 ### # start gene g223 Scaffold_1 AUGUSTUS gene 1070107 1071063 1 - . g223 Scaffold_1 AUGUSTUS transcript 1070107 1071063 1 - . g223.t1 Scaffold_1 AUGUSTUS stop_codon 1070107 1070109 . - 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_1 AUGUSTUS CDS 1070107 1071063 1 - 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_1 AUGUSTUS start_codon 1071061 1071063 . - 0 transcript_id "g223.t1"; gene_id "g223"; # protein sequence = [MANNDSGEYPVDFEDEYFSEVDLGNLENQPSQEADQFGLDNRTAEWMDPTEVATTDPNSLPPTAIVSAPNSLDSRFRD # LGRELRARLYTVSSHQQTSNRSADNFAAAGGVVTTSSPTRLQVPSRRGHKLGSTSKPRKSRNSETALQPITYPQSSLLDQGSSKETKGQQMHRLESNI # VRLETLINRRVEDIQTSTASAASSLREQMLQDIQQETSRGADRLASTQASHHLQLKNLIHQELHLLEDQLKSLISSSIPLEAMNDLLATMENLFSGTP # SFSAPSVTSPLSSPLLLSHLLLLNPPSLLPRYSIASQTLPYQDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g223 ### # start gene g224 Scaffold_1 AUGUSTUS gene 1072231 1072791 0.66 - . g224 Scaffold_1 AUGUSTUS transcript 1072231 1072791 0.66 - . g224.t1 Scaffold_1 AUGUSTUS stop_codon 1072231 1072233 . - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_1 AUGUSTUS CDS 1072231 1072791 0.66 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_1 AUGUSTUS start_codon 1072789 1072791 . - 0 transcript_id "g224.t1"; gene_id "g224"; # protein sequence = [MTTIAAPGTQHTVGTVIHTVPQRRKKGPGISAAYQQLQITPDCDKFNDWSHTPPPPYAHDLGYNEPGTTLVDFLKSIK # NLQSALHDCANPNLDITVVIDSPVSYILAVLDYLYSKGMLIAYDKPSIKDLLDTISLLAKIPGPSRLSWGFLESKSKTNKQRWLKFPNIHSGKTLLCF # LVFPIVLGWR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g224 ### # start gene g225 Scaffold_1 AUGUSTUS gene 1087886 1088608 1 + . g225 Scaffold_1 AUGUSTUS transcript 1087886 1088608 1 + . g225.t1 Scaffold_1 AUGUSTUS start_codon 1087886 1087888 . + 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_1 AUGUSTUS CDS 1087886 1088608 1 + 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_1 AUGUSTUS stop_codon 1088606 1088608 . + 0 transcript_id "g225.t1"; gene_id "g225"; # protein sequence = [MAFHRLDSYDDSAHNYYPSHDDSDDIADEYEYGPSSSTEGGYSGYASTDYLGSSSASVPRYQPGQHLAPIHTGETLQF # DEHSTLYTQSNPSSTLSYAQNSQSHNNSVSEEYFGYQPEYAAASNHSYASHSYTSAGSAYSSTTGLRSVPPPRSRSPTPAGDDEDYYVVGNDSVHYTG # GLHDPEKADNYNNYNNYSSYDSRYAYDSLPTPTEPITPVETRHFGPAQVVESRVAQYEETSAVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g225 ### # start gene g226 Scaffold_1 AUGUSTUS gene 1092576 1093236 0.57 - . g226 Scaffold_1 AUGUSTUS transcript 1092576 1093236 0.57 - . g226.t1 Scaffold_1 AUGUSTUS stop_codon 1092576 1092578 . - 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_1 AUGUSTUS CDS 1092576 1093106 1 - 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_1 AUGUSTUS CDS 1093222 1093236 0.57 - 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_1 AUGUSTUS start_codon 1093234 1093236 . - 0 transcript_id "g226.t1"; gene_id "g226"; # protein sequence = [MLSASPDRQAAASLDTPPVTDLDTSSSLFDSDTDFGSSAFADSDAESVVSQPGIVAAHNNLSDIDELGSQSDDMSPEL # DTDTWSVIGDSDADGELSEAEHSVERQFTSMSMRVGSEDPERTLEAISPRNLRQTGPSDRWPVQRSTSSPSRSRVRTAPRRLVLRNSPPAIKETKTLY # AYLYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g226 ### # start gene g227 Scaffold_1 AUGUSTUS gene 1094124 1094936 0.85 - . g227 Scaffold_1 AUGUSTUS transcript 1094124 1094936 0.85 - . g227.t1 Scaffold_1 AUGUSTUS stop_codon 1094124 1094126 . - 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_1 AUGUSTUS CDS 1094124 1094936 0.85 - 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_1 AUGUSTUS start_codon 1094934 1094936 . - 0 transcript_id "g227.t1"; gene_id "g227"; # protein sequence = [MGVLHTAARHGLPDIATDVLRVLNLTGVPLQERHFAPLIEAFCRAGQVKEAFMTIDIMQETTPPLPSTLLPILEHVKK # NTDTFDSTWALMDEIHQERPLQVSSLNIIIGAAVALGDLQRAVGAYKSFPDYNVKADRNTFHLLLEGAVAARHQPLGARILQDMKEADIALESRTYEL # MIELAITQDTYEEAFEYLEEMKGAGFKPPATTYKSLVKKCAINGDPRYTIALEEMEEMGYEKDPEFLRKAKDVFSKESTGMMFIEEAENTTVAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g227 ### # start gene g228 Scaffold_1 AUGUSTUS gene 1096696 1098502 0.17 + . g228 Scaffold_1 AUGUSTUS transcript 1096696 1098502 0.17 + . g228.t1 Scaffold_1 AUGUSTUS start_codon 1096696 1096698 . + 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_1 AUGUSTUS CDS 1096696 1097227 0.28 + 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_1 AUGUSTUS CDS 1097281 1097532 0.25 + 2 transcript_id "g228.t1"; gene_id "g228"; Scaffold_1 AUGUSTUS CDS 1097688 1098502 0.28 + 2 transcript_id "g228.t1"; gene_id "g228"; Scaffold_1 AUGUSTUS stop_codon 1098500 1098502 . + 0 transcript_id "g228.t1"; gene_id "g228"; # protein sequence = [MSSSFFFLPRLLQDFDEDRPAPAHGQHQARIDDITLPPTDTFEPLDFDNDNFDLGPSDGIGSQDFLDLGVDFGDAPIQ # SEKGADESMSVDGSVGVGRDAASHRDSIGDQFMDLDGNFDLLSRRSRTRELSEHPFGADMALDMPEFGDIDLGDLGIGFDPIPMDIDKTPGQTRSSSR # ASSPLSSVPATPPPDVGITENAEATPTVSKLKRKIKEKKQIIDMVTELKDGPGAKIGRGRDVQNNRDLSDILTEPHFLPRSAVVMRPSPGGKGPNKRQ # RLDNAAEDEEIEVGRRADSIAPASDILGRGSMGPDALEFGDQSGIIDDFQLDIPQFDPVNVDLDRRSKSAAPSVRSRMSTPLWKELYLKREMRTTPIQ # LALSAFDSQTQTQVTGTEKGVQPVDSYSRNTVKAISVIRKELRPTEGDAEEKVLSFRKMADKVGIIYIVRFFPLTVFSLGISTCCCFVFLRIARPSTR # DCIAVNQPTPFENIEVRAKDKLWDVQHHAPSRMTSVAPSVAPSTAPSRAPSVARSLASSLGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g228 ### # start gene g229 Scaffold_1 AUGUSTUS gene 1102023 1102406 0.74 - . g229 Scaffold_1 AUGUSTUS transcript 1102023 1102406 0.74 - . g229.t1 Scaffold_1 AUGUSTUS stop_codon 1102023 1102025 . - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_1 AUGUSTUS CDS 1102023 1102406 0.74 - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_1 AUGUSTUS start_codon 1102404 1102406 . - 0 transcript_id "g229.t1"; gene_id "g229"; # protein sequence = [MNGNTAFILITITNCLSRLQHESVGRMAGLTTEQLLAIRLAPPFFASQGVNLTSILGADLVAAMTFTDWITKNVHVPD # DVFNALKTFLNDSQLVEATATAAGYSFISRFVVALNVDAKMDVPVPVPT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g229 ### # start gene g230 Scaffold_1 AUGUSTUS gene 1103607 1104029 0.53 - . g230 Scaffold_1 AUGUSTUS transcript 1103607 1104029 0.53 - . g230.t1 Scaffold_1 AUGUSTUS stop_codon 1103607 1103609 . - 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_1 AUGUSTUS CDS 1103607 1104029 0.53 - 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_1 AUGUSTUS start_codon 1104027 1104029 . - 0 transcript_id "g230.t1"; gene_id "g230"; # protein sequence = [MPQARNHTGCVFPTPLNRFAQNNSGVFRQVISSNCDAAVNYNQGCGVASTTPNSYGSGFNNNGGGWIVTWRSSNAISH # WFWPRNAPNVPNEIRQSESDCDPITPGDNWGTPDSTFVWSQCDYNPHFDPHQIIFDLTLCVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g230 ### # start gene g231 Scaffold_1 AUGUSTUS gene 1105943 1106575 0.88 + . g231 Scaffold_1 AUGUSTUS transcript 1105943 1106575 0.88 + . g231.t1 Scaffold_1 AUGUSTUS start_codon 1105943 1105945 . + 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_1 AUGUSTUS CDS 1105943 1106575 0.88 + 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_1 AUGUSTUS stop_codon 1106573 1106575 . + 0 transcript_id "g231.t1"; gene_id "g231"; # protein sequence = [MSVRARIVGRQASAVSVDGSVTDLPAVTPGVQTTTNSDAVSVDGPVTMLPPESPGLQPASVTVTSDLFTLSTFGIGLP # TPAATNPSTATSSIDGGAIAGGVVAAVVVAVIAVALLLRYRNKRSSRHWRNRIKGGAFGPSHNRSGWQNLDIKSDAVNGDSGFQAGRSNRVLDDHKSP # ITSPVTAKFSTPLMTYPPGASHLPNEKELESMRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g231 ### # start gene g232 Scaffold_1 AUGUSTUS gene 1107073 1107495 0.76 + . g232 Scaffold_1 AUGUSTUS transcript 1107073 1107495 0.76 + . g232.t1 Scaffold_1 AUGUSTUS start_codon 1107073 1107075 . + 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_1 AUGUSTUS CDS 1107073 1107495 0.76 + 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_1 AUGUSTUS stop_codon 1107493 1107495 . + 0 transcript_id "g232.t1"; gene_id "g232"; # protein sequence = [MAPEILDGIFPAPENDMQDFVQSNYVNEVKPDTDTIMEQVIGPVDVSDVLLTMGMTDVIVNEVDMLYYGDLAIGTPGQ # GLTFDVDTGSADLWVPSPWCGNSKNHYDGSQSSTYVDQDRRFAVSYVSCIRSVNGISLTLHK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g232 ### # start gene g233 Scaffold_1 AUGUSTUS gene 1114355 1114888 0.77 - . g233 Scaffold_1 AUGUSTUS transcript 1114355 1114888 0.77 - . g233.t1 Scaffold_1 AUGUSTUS stop_codon 1114355 1114357 . - 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_1 AUGUSTUS CDS 1114355 1114888 0.77 - 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_1 AUGUSTUS start_codon 1114886 1114888 . - 0 transcript_id "g233.t1"; gene_id "g233"; # protein sequence = [MTATAIDVDRPRDIVVDEMSEVKMAPVSMSGVKPTHRVSNGADNHGTSAMPSQTLTLPQSSNSKIPQPHLSNRLRDHH # STPPSTQLLPEDETDGVTSGAVQPPGSTGEPLIRSITHDSDEDTDGTHFTEDQGEDLQQSLLSEEQAEEERLIRNGGSGIPIGPVSTRSEGLLPIHSL # C] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g233 ### # start gene g234 Scaffold_1 AUGUSTUS gene 1116329 1116658 0.84 - . g234 Scaffold_1 AUGUSTUS transcript 1116329 1116658 0.84 - . g234.t1 Scaffold_1 AUGUSTUS stop_codon 1116329 1116331 . - 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_1 AUGUSTUS CDS 1116329 1116658 0.84 - 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_1 AUGUSTUS start_codon 1116656 1116658 . - 0 transcript_id "g234.t1"; gene_id "g234"; # protein sequence = [MTTSKTIPFPLYPVPLLQPPVDFLLLTGTARAEAGLEVEADEDLEAKAEDLISLGEEAMTVDAELGEHEAQRFQLGVG # QPKPDILPTDDLLHQPKQVQRPRAENGTPTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g234 ### # start gene g235 Scaffold_1 AUGUSTUS gene 1117869 1118246 0.76 - . g235 Scaffold_1 AUGUSTUS transcript 1117869 1118246 0.76 - . g235.t1 Scaffold_1 AUGUSTUS stop_codon 1117869 1117871 . - 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_1 AUGUSTUS CDS 1117869 1118246 0.76 - 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_1 AUGUSTUS start_codon 1118244 1118246 . - 0 transcript_id "g235.t1"; gene_id "g235"; # protein sequence = [MFGFDMIANGMRGESLDEVAMTDEELEVFGLDWEGLRDETLLRSLRRNYCNEGSGSWLGQQGPPPELNRVVVDPPSGL # FTPEQIAHMDEQLLGLGRGPQIEDVVHLWTTALAIARSISSNDPTLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g235 ### # start gene g236 Scaffold_1 AUGUSTUS gene 1122897 1123346 0.51 - . g236 Scaffold_1 AUGUSTUS transcript 1122897 1123346 0.51 - . g236.t1 Scaffold_1 AUGUSTUS stop_codon 1122897 1122899 . - 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_1 AUGUSTUS CDS 1122897 1123346 0.51 - 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_1 AUGUSTUS start_codon 1123344 1123346 . - 0 transcript_id "g236.t1"; gene_id "g236"; # protein sequence = [MSEQDILAIILLPDNPQPIAAKIPSIPSDEYGNPSTTAVHDLLKRKHYKLGLDYLFPVVVTKFVNLTNAETKFVSRMH # VFGWGDPELPLHNDVCEAENCSRGEGEAYWRVPILAICVSEDGKAQSAKVEDAALLMTFFQRCVSSIFCYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g236 ### # start gene g237 Scaffold_1 AUGUSTUS gene 1128849 1129507 0.36 + . g237 Scaffold_1 AUGUSTUS transcript 1128849 1129507 0.36 + . g237.t1 Scaffold_1 AUGUSTUS start_codon 1128849 1128851 . + 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_1 AUGUSTUS CDS 1128849 1128897 0.36 + 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_1 AUGUSTUS CDS 1128960 1129507 0.89 + 2 transcript_id "g237.t1"; gene_id "g237"; Scaffold_1 AUGUSTUS stop_codon 1129505 1129507 . + 0 transcript_id "g237.t1"; gene_id "g237"; # protein sequence = [MDALNALHKASTSSTHNLANSLRRATDLNDQLKQIGSLFDTARELFLRSILDLQNAGEDPIVVLEALKTAEPNRRAIT # LNEWTLMATLFRWPSPFNLSGLDFDNRTPGEWIELLRSIQSGESTVHIDKHGHLVEASPPPDSATEALEGLKEVKRGSADEGASSPVGGSVPMELDLP # TIESLAERTLSPEKGAESAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g237 ### # start gene g238 Scaffold_1 AUGUSTUS gene 1133195 1134076 0.38 + . g238 Scaffold_1 AUGUSTUS transcript 1133195 1134076 0.38 + . g238.t1 Scaffold_1 AUGUSTUS start_codon 1133195 1133197 . + 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_1 AUGUSTUS CDS 1133195 1134076 0.38 + 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_1 AUGUSTUS stop_codon 1134074 1134076 . + 0 transcript_id "g238.t1"; gene_id "g238"; # protein sequence = [MREYTRGGPSPVVPQPRSWQATEPISFNRNTPTGARDGNPQVEQAGQIPDTPSVDRRRIHEWGARVQRAELGEYGRPE # GGAYALENEGGGKGGFNPPPRVPPPHFSSQSRDRERPPSQGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSNSEGSNEGEQNQSSRNGGRREEDRG # ELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIMLGKRT # SALPQLVISLVQHSPTSTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g238 ### # start gene g239 Scaffold_1 AUGUSTUS gene 1138581 1139900 1 + . g239 Scaffold_1 AUGUSTUS transcript 1138581 1139900 1 + . g239.t1 Scaffold_1 AUGUSTUS start_codon 1138581 1138583 . + 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_1 AUGUSTUS CDS 1138581 1139900 1 + 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_1 AUGUSTUS stop_codon 1139898 1139900 . + 0 transcript_id "g239.t1"; gene_id "g239"; # protein sequence = [MHNPVIDWKELCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVPQ # QTPEAPLRAPRTRVKLEEVKDEEYEASQPGPHKLFPSDKDLGPDDPILMGINEWLAFASESTEEEVEEILEAGRSAMEKVTPKPTKDSEEAYQKWKSR # DTERSSSWPGAKQKVRWRKKRREHGPYPDLPTLDIESLNIPKIPSRSGLTPKGSIRRNNFRRKQLIAGTHVVERKSDPTIQGKPISLIGAAGMDRLLR # EGTPAYFLHISPRRRSPLLKKCSGRVIAAQRVQQPKDPESGDPSSEQGGVVKELDRRSKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYDIK # IETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTLRLCVDYRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g239 ### # start gene g240 Scaffold_1 AUGUSTUS gene 1141643 1142317 0.48 + . g240 Scaffold_1 AUGUSTUS transcript 1141643 1142317 0.48 + . g240.t1 Scaffold_1 AUGUSTUS start_codon 1141643 1141645 . + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_1 AUGUSTUS CDS 1141643 1142317 0.48 + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_1 AUGUSTUS stop_codon 1142315 1142317 . + 0 transcript_id "g240.t1"; gene_id "g240"; # protein sequence = [MPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQTERVNQSVEAYLRIYCSYDQDDWDLLLPMAEFVYNN # TPNTTTGVSPFFANKGYHPKLSITLEQVQEAEVNEYASNLKELRIEVANKVYAKYANQKRQEAPDWKEGDQVWLNMENVRTRRPMKKLDHKWTGPYTV # LSKVGSHAYRLDLPGDLHKIHNVFHVDRLKPHFHDKFKRQTSPPPQSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g240 ### # start gene g241 Scaffold_1 AUGUSTUS gene 1142743 1144909 0.15 - . g241 Scaffold_1 AUGUSTUS transcript 1142743 1144909 0.15 - . g241.t1 Scaffold_1 AUGUSTUS stop_codon 1142743 1142745 . - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_1 AUGUSTUS CDS 1142743 1144071 0.51 - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_1 AUGUSTUS CDS 1144127 1144909 0.17 - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_1 AUGUSTUS start_codon 1144907 1144909 . - 0 transcript_id "g241.t1"; gene_id "g241"; # protein sequence = [MLDEQDAVDADQQELQQFLTLQRDEAAVAAKRKRNRSPMPVAGPSSKKIRSDAPKTDAPKKRSRRKSPAVEVNVEPFR # RVRLVVPPVRSVAPTSLPVPPPASPSLMGVLNRDLPMQGPSDLVRLADAAEVHPGLVQQAGSSSPARTPIKGTGQDLLSSTMPPILRPALVPRNPASH # PYRAENQRLAARVRLLETQLADSQRENSSLTSALRDTSHALESRQREVEQLRSSSQEFLQRQEEYRHIIDQFNTLDRALSGPSDQSLLERFQKVEEEL # RITRRIGTTTGKLSTSSRRISELTTALLYQHGITDEGNALSTRQRARLEELQEEVHRTRGRAAFVERMIKEYPDEGYYEVVLPPLSQLEGDLVKVRAD # LRRVATLAHRLYRSDPATVLHHHNRYIGAIIEAVVAFLRRALETEDPDIMEHNIRLALDYMQTARGVHGDLHIRSISSIQWFFNNAVDQDEGLYTLML # ENSRFDSDRPFLTAAQHAGFTSPPPDSLEPPLHRRMLSLSTALPHRGGAGRWDDLVPAIPSDDQLTQDWEQLMLQYMHHITDTPLPVPDPPVPMSSTG # PVPESSDETNVEQSLEAPIVQVSSPSGGSHPPVPLFLSEQESPTSPSPPPRSPVPPLLFGSVASLSIDLTGDDDELYETEEAYASRIDVAMEGTELAV # GQGIVKESRCSIPFVVLVPFPFCTSVKYYACLIFCFC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g241 ### # start gene g242 Scaffold_1 AUGUSTUS gene 1156130 1156510 1 - . g242 Scaffold_1 AUGUSTUS transcript 1156130 1156510 1 - . g242.t1 Scaffold_1 AUGUSTUS stop_codon 1156130 1156132 . - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_1 AUGUSTUS CDS 1156130 1156510 1 - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_1 AUGUSTUS start_codon 1156508 1156510 . - 0 transcript_id "g242.t1"; gene_id "g242"; # protein sequence = [MQIKLQSYEDSNENIDHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKV # GAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYCDDTRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g242 ### # start gene g243 Scaffold_1 AUGUSTUS gene 1157446 1158219 0.97 - . g243 Scaffold_1 AUGUSTUS transcript 1157446 1158219 0.97 - . g243.t1 Scaffold_1 AUGUSTUS stop_codon 1157446 1157448 . - 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_1 AUGUSTUS CDS 1157446 1158219 0.97 - 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_1 AUGUSTUS start_codon 1158217 1158219 . - 0 transcript_id "g243.t1"; gene_id "g243"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIHNRRVRPRTKTDNYVSTLSEDGETEILDKPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPWVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g243 ### # start gene g244 Scaffold_1 AUGUSTUS gene 1158249 1161237 0.31 - . g244 Scaffold_1 AUGUSTUS transcript 1158249 1161237 0.31 - . g244.t1 Scaffold_1 AUGUSTUS stop_codon 1158249 1158251 . - 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_1 AUGUSTUS CDS 1158249 1160218 0.62 - 2 transcript_id "g244.t1"; gene_id "g244"; Scaffold_1 AUGUSTUS CDS 1161222 1161237 0.38 - 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_1 AUGUSTUS start_codon 1161235 1161237 . - 0 transcript_id "g244.t1"; gene_id "g244"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQ # SHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLR # DNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g244 ### # start gene g245 Scaffold_1 AUGUSTUS gene 1168317 1169483 0.88 - . g245 Scaffold_1 AUGUSTUS transcript 1168317 1169483 0.88 - . g245.t1 Scaffold_1 AUGUSTUS stop_codon 1168317 1168319 . - 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_1 AUGUSTUS CDS 1168317 1169483 0.88 - 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_1 AUGUSTUS start_codon 1169481 1169483 . - 0 transcript_id "g245.t1"; gene_id "g245"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g245 ### # start gene g246 Scaffold_1 AUGUSTUS gene 1177518 1177977 0.49 + . g246 Scaffold_1 AUGUSTUS transcript 1177518 1177977 0.49 + . g246.t1 Scaffold_1 AUGUSTUS start_codon 1177518 1177520 . + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_1 AUGUSTUS CDS 1177518 1177580 0.49 + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_1 AUGUSTUS CDS 1177618 1177977 1 + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_1 AUGUSTUS stop_codon 1177975 1177977 . + 0 transcript_id "g246.t1"; gene_id "g246"; # protein sequence = [MSSADAEPSPTTFISSDHELDNGVDDPPPSPGAESVSTGAASSDDGDSDEDEDEGAEENERVDENGAIVIDDDDDDDE # RGGTSNDIQEPSITIKDEPSSSNAAPALLNESNNAPKPNSETVNKAENHLLANLHSDYEAKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g246 ### # start gene g247 Scaffold_1 AUGUSTUS gene 1180587 1181912 0.95 - . g247 Scaffold_1 AUGUSTUS transcript 1180587 1181912 0.95 - . g247.t1 Scaffold_1 AUGUSTUS stop_codon 1180587 1180589 . - 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_1 AUGUSTUS CDS 1180587 1181912 0.95 - 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_1 AUGUSTUS start_codon 1181910 1181912 . - 0 transcript_id "g247.t1"; gene_id "g247"; # protein sequence = [MVAEDFRLPQGLYEAYGEPGIKPFEGLSGCKPTAKHAVRMLELPEFIHSYLVSGGERPFAFWPPVDSEAFCLSPIPSI # ERELLVALLNEYPATIDRGTVANKQDLSLRVIFVHVNSLRLAPSQGNIRDLPNLSGYRAGNDVRFIAYGSSDIVNPRFPDIMEEIWHIGMRQLMVSIA # IADTDILGGITTFTASALLSDPLGVNERILQIEEHEFWVCYILPAVIGMAVSVAYSGREHLIQKRIACDALEHGVHRTEAQSVMMVVDEDGVDEIPCT # CDGFAYEWLLDAIDEEFVSVIGAPPLHSSDPNLGGHGAIIHPGVPRDGRPRGKEEWKQLSDTLQHSSSSTAFKNTAPPPQEFPPFSVEAQYNDPFASW # ILQLFDSDVRSRSQTLDFCVQEFKRICGTMPQEEWENVIKKEITEELGRMQISRGFREELRRFRRCHWK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g247 ### # start gene g248 Scaffold_1 AUGUSTUS gene 1182145 1182480 0.99 - . g248 Scaffold_1 AUGUSTUS transcript 1182145 1182480 0.99 - . g248.t1 Scaffold_1 AUGUSTUS stop_codon 1182145 1182147 . - 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_1 AUGUSTUS CDS 1182145 1182480 0.99 - 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_1 AUGUSTUS start_codon 1182478 1182480 . - 0 transcript_id "g248.t1"; gene_id "g248"; # protein sequence = [MINVDDNNEAQTISIEGMLLPSDPSAGQIALQQGVMPLKVAMSYNDSKLLMKSRSFYRLEDLNGIVAACNPVQEWGWL # DAETEQGARNLGKVADFLSHEKLVNTFQSFCNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g248 ### # start gene g249 Scaffold_1 AUGUSTUS gene 1183155 1183688 0.59 - . g249 Scaffold_1 AUGUSTUS transcript 1183155 1183688 0.59 - . g249.t1 Scaffold_1 AUGUSTUS stop_codon 1183155 1183157 . - 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_1 AUGUSTUS CDS 1183155 1183688 0.59 - 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_1 AUGUSTUS start_codon 1183686 1183688 . - 0 transcript_id "g249.t1"; gene_id "g249"; # protein sequence = [MSGNYVIRQSTFSSQQASAVDDPAFLFTPEKSATQKLSRQSPEEKEAESLSHTSPVPSSSMPTISAQAEAKKKASLPR # LPPVRAASGLSTEKSTSFPILPALKAHNPALQPKLSIQTKLRTDSPVSAGGISTKQRLAQAALQMTTPTEKVAEASRPLPPQKASSLSGMNFKRIVDP # P] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g249 ### # start gene g250 Scaffold_1 AUGUSTUS gene 1186372 1187156 0.5 + . g250 Scaffold_1 AUGUSTUS transcript 1186372 1187156 0.5 + . g250.t1 Scaffold_1 AUGUSTUS start_codon 1186372 1186374 . + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_1 AUGUSTUS CDS 1186372 1186665 0.5 + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_1 AUGUSTUS CDS 1186738 1186759 0.6 + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_1 AUGUSTUS CDS 1186822 1187156 0.6 + 2 transcript_id "g250.t1"; gene_id "g250"; Scaffold_1 AUGUSTUS stop_codon 1187154 1187156 . + 0 transcript_id "g250.t1"; gene_id "g250"; # protein sequence = [MPSTPNPAGLLITGIVTYTDGSTSPIVSDTTWRTSEGGLPSGFQDLSFDDSTWAPAVTEGGNGVAPWGTVALAGIDPI # SFDTAQWIWTNEASIGLYPLTQTTSTPLENVQGPQVVFAVYAENTNTVPNPAGLLAAIQLNSQDGYCADCVSTSSIVTSVAWKAFPGAVPSGFEQQGF # DDSSWPAAVEEGANGVEPWGTIAVPTAVTTGGSPLPGAPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g250 ### # start gene g251 Scaffold_1 AUGUSTUS gene 1188611 1189943 0.09 + . g251 Scaffold_1 AUGUSTUS transcript 1188611 1189943 0.09 + . g251.t1 Scaffold_1 AUGUSTUS start_codon 1188611 1188613 . + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_1 AUGUSTUS CDS 1188611 1188638 0.45 + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_1 AUGUSTUS CDS 1188798 1189195 0.39 + 2 transcript_id "g251.t1"; gene_id "g251"; Scaffold_1 AUGUSTUS CDS 1189302 1189943 1 + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_1 AUGUSTUS stop_codon 1189941 1189943 . + 0 transcript_id "g251.t1"; gene_id "g251"; # protein sequence = [MFKLMQLARCQRRSNDTTQCLNTRASDGLAKRATPALSFDASQWIWTPELSGGNAPVGSRGLRKTFVPPQGKTPAFLT # IAYAVDNTAILYVNGQEISTQDGWQIADTSCINLADCGCAVIIAVNATNVSNAPNPAGLLVTGIYLGTCSHGGGNGVAPWGTVALAGSDPISFDTAQW # IWTNEASIGLYPPGARAFRYTSTLPGGQSSGSATIIIDTDNEYSLYVNGVFVGTGTDFNTAQKYTVENVQGPQVIFAVYAENTATVPNPAGLLAAIQL # NSQDGYCADCISTSSIVTSVAWKAFPGAVPSGFEQQGFDDSSWPAAVEEGANGVAPWGTIAVPTTVTTGALIARRSKPDQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g251 ### # start gene g252 Scaffold_1 AUGUSTUS gene 1197041 1197475 1 + . g252 Scaffold_1 AUGUSTUS transcript 1197041 1197475 1 + . g252.t1 Scaffold_1 AUGUSTUS start_codon 1197041 1197043 . + 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_1 AUGUSTUS CDS 1197041 1197475 1 + 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_1 AUGUSTUS stop_codon 1197473 1197475 . + 0 transcript_id "g252.t1"; gene_id "g252"; # protein sequence = [MPKPPPPSPAAKHSKATASTRARGKAKATNLPNPTNTNSSSSSSTSRSARLGTQDTITIEDSDNEDEHQSRTRSKAGS # KRKRGAGTNSLDADSATTEESLDLDDDDEIEFAEARRSHKRSTRATPAVRGRHVDDSDVIVIDDED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g252 ### # start gene g253 Scaffold_1 AUGUSTUS gene 1197919 1198593 0.46 - . g253 Scaffold_1 AUGUSTUS transcript 1197919 1198593 0.46 - . g253.t1 Scaffold_1 AUGUSTUS stop_codon 1197919 1197921 . - 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_1 AUGUSTUS CDS 1197919 1198206 0.81 - 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_1 AUGUSTUS CDS 1198281 1198512 0.52 - 1 transcript_id "g253.t1"; gene_id "g253"; Scaffold_1 AUGUSTUS CDS 1198580 1198593 0.54 - 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_1 AUGUSTUS start_codon 1198591 1198593 . - 0 transcript_id "g253.t1"; gene_id "g253"; # protein sequence = [MFLRDYQLAAVNSGVVDSTCSNLQPGASLCLGYEGEDCTSTYTVVAQDTCDSIYDAYGINATLLYGNNPQIDSACDNI # YVGEVLCVASTIAAPPAGSASVNTAIPSTATAAASATPTTSSSAISITVASSSVALPVVTTSTFTSFSATSSTFTSVAASSSSSSDDGDDDDLPYCDE # L] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g253 ### # start gene g254 Scaffold_1 AUGUSTUS gene 1218446 1219306 0.78 + . g254 Scaffold_1 AUGUSTUS transcript 1218446 1219306 0.78 + . g254.t1 Scaffold_1 AUGUSTUS start_codon 1218446 1218448 . + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_1 AUGUSTUS CDS 1218446 1219306 0.78 + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_1 AUGUSTUS stop_codon 1219304 1219306 . + 0 transcript_id "g254.t1"; gene_id "g254"; # protein sequence = [MSTGAELDPSTYKCSGCSHQFSRASYFIQHLEKTSKPQCMAAHEDLKKTIHRSRFMPQKTPPTYHSPELSKISPSAPL # VPPLDTEHDLYVTTPQSVSDFYGHDYSNEDFPGFNEDYNGMGGDIDNDSEDEEQLPPELEDAWELPRVPASSAEHNVDVDAIPTLLTERSLLRDLPSH # RDGIHVESFGGQAGAPVKGRNSRNPVLYSSRDGFLQYRSHIPHKGKNPWSPFASQMDWEVAKWAKHGKLDRLLSATCLLLTVYVLYCHLPFAMTKLLN # STGIQSIRTFIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g254 ### # start gene g255 Scaffold_1 AUGUSTUS gene 1227498 1228319 0.68 + . g255 Scaffold_1 AUGUSTUS transcript 1227498 1228319 0.68 + . g255.t1 Scaffold_1 AUGUSTUS start_codon 1227498 1227500 . + 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_1 AUGUSTUS CDS 1227498 1228319 0.68 + 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_1 AUGUSTUS stop_codon 1228317 1228319 . + 0 transcript_id "g255.t1"; gene_id "g255"; # protein sequence = [MTKTFFVNLALVFNDCPKYFTDQRKVNYTLSYLSVSAKEWFVPDILDPDLDSLPAWTSSFKALVSELQDNFGVYDAQG # EAEDSLGNLKIKETENIWKYNIRFNTLAASTNWDSAALKWAYGRGLAEYIKDGMARLPKPATLTNYRQEVLRIDNRYWKREETRKREAGKPFVARNPK # KGSSDFKTGATNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSLNSGQSSGQRPAFNHPGADGKVLPSEKERRMKNNLCLFCSGKHQIADCNK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g255 ### # start gene g256 Scaffold_1 AUGUSTUS gene 1236628 1236951 0.52 + . g256 Scaffold_1 AUGUSTUS transcript 1236628 1236951 0.52 + . g256.t1 Scaffold_1 AUGUSTUS start_codon 1236628 1236630 . + 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_1 AUGUSTUS CDS 1236628 1236951 0.52 + 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_1 AUGUSTUS stop_codon 1236949 1236951 . + 0 transcript_id "g256.t1"; gene_id "g256"; # protein sequence = [MTTADPIRPSSISSPIMRPMRGSRIDVFYGTGAYAASTASTREKEASEPQLPSLSSLDSAFQLQEYISLVIRKDVHDV # DRIISIPSIPGKEDGKGVDENCWIYEQLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g256 ### # start gene g257 Scaffold_1 AUGUSTUS gene 1236994 1238890 0.72 + . g257 Scaffold_1 AUGUSTUS transcript 1236994 1238890 0.72 + . g257.t1 Scaffold_1 AUGUSTUS start_codon 1236994 1236996 . + 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_1 AUGUSTUS CDS 1236994 1238200 0.73 + 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_1 AUGUSTUS CDS 1238355 1238890 0.96 + 2 transcript_id "g257.t1"; gene_id "g257"; Scaffold_1 AUGUSTUS stop_codon 1238888 1238890 . + 0 transcript_id "g257.t1"; gene_id "g257"; # protein sequence = [MFNRRLAQDLTHPLITALQVECTRRTCPEMKAGEWLYLCVAHGNESTSHSSSSSENGSGGPGGGMMMEQCCAIDYILH # TIDSATALLNSPRAFPSRLSIPVPSVRHFSSLARRLGRVFAHAYFHHRDLFEQAEAESSLYRRFEEMVGRWGLVPREFLVIPSLGKENDLSKLDDDSR # KREEPRLEAAAVNFDDHLGFEDDEDGHFNDKVKPVSILLDNSAVGTGPTVTRITPPLEAGAGGDFSRSKSSSPGNTSGKKFGRNRTGTMVFSEASALV # DELSKSPGGRAQVELAEASAQLANSQSTSAGESKTSVAVAPTESSKSSEIAELPTSSESQNTAASSEPSSESSQSHSPSPPFETDSSLPKEVENDPPH # EATVPAPEEQEVMTQAVEAESPEEAQEKSTREGDGKDAAVPLSNDMVKKDAGEGEEVATETSAEEETKEEAEEKESEANAQETQENEDNEVKTSSEET # PARSSHESASPTSESTEFSESPQSSEPTEEPVQEPVEEDVESKKIEEASTGEIATTAPEAEATVTGSAETGNITEGESDRTEVSEKEEPETVTEKAEV # EKVENDNESKDA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g257 ### # start gene g258 Scaffold_1 AUGUSTUS gene 1242944 1243306 0.62 + . g258 Scaffold_1 AUGUSTUS transcript 1242944 1243306 0.62 + . g258.t1 Scaffold_1 AUGUSTUS start_codon 1242944 1242946 . + 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_1 AUGUSTUS CDS 1242944 1243306 0.62 + 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_1 AUGUSTUS stop_codon 1243304 1243306 . + 0 transcript_id "g258.t1"; gene_id "g258"; # protein sequence = [MASFGQFLGGTLGLGVAEPVFSSELAKYLLKYAPDAPATIVKESPTAIYTEISPSLIPGVVQAYSQSLRIVFVVGVPV # AGLALFTAMFIKNTRIVKTAPPPSSSVPASETEGKGKDIEKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g258 ### # start gene g259 Scaffold_1 AUGUSTUS gene 1248459 1249052 0.54 - . g259 Scaffold_1 AUGUSTUS transcript 1248459 1249052 0.54 - . g259.t1 Scaffold_1 AUGUSTUS stop_codon 1248459 1248461 . - 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_1 AUGUSTUS CDS 1248459 1249052 0.54 - 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_1 AUGUSTUS start_codon 1249050 1249052 . - 0 transcript_id "g259.t1"; gene_id "g259"; # protein sequence = [MQEEEMQDILQQVGKLEQLDQVNETLITALQESMNEAGTRAGEGNEQTPIIVDLDDAPVPTRALAPASAPASGSGSGS # GSGSGSGPGPGPGSGSGSGSGSTVNTIDKENANANVKEGNAKHKDKGKSQPKTGGGVSASHSHSALANPDSSDSNSSDSDSDSSSDSSSSSSSDAGPR # RRPSKYTIDAYHAGNVRFGVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g259 ### # start gene g260 Scaffold_1 AUGUSTUS gene 1252415 1253968 0.3 - . g260 Scaffold_1 AUGUSTUS transcript 1252415 1253968 0.3 - . g260.t1 Scaffold_1 AUGUSTUS stop_codon 1252415 1252417 . - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_1 AUGUSTUS CDS 1252415 1253968 0.3 - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_1 AUGUSTUS start_codon 1253966 1253968 . - 0 transcript_id "g260.t1"; gene_id "g260"; # protein sequence = [MKRIRTARKTTTTFSTRRVKRTREEKRKGQSPSTAILVPSSDDDDDALPIAGKLNGPGPAPAEGPRSAPAPASAPASA # PRQAPAPAPGPTAGRTTIHEIFEITDSEEEKEKGVDSLTKTTPKPLSLPPPLPPTLPLSLQRAPAPPPLDPTHLPISEPTIISSDSEPEPNHHPNPTP # TPHPHSYSEPHPQIHPHPQLPRARPSSPTNDEDTDNDREWLKSFADAFNASGEANFGTARRRRSKDGADTGAGVGAGAGAKKPKPNLKPKPTPKSNLN # PTSKPTPNPNPKSKLPHSPPLRTSPFTPLPGSKAYAYSYSHRRSHPSLNPSLNPSLNPSLGSSLGSLNPLVQKSHPNPNPTKPNKINIKINNKTPCES # SFLPSPSITPPTLVQSTGVETPSPNPSPSPPSSQSPSSQSPSSPSSPSSPSSPSSRSSSPSSSPSNPTPIPNSNPNSNPNSNSNPNSKTPHPPTKKQK # ALALLALLGTPRVTGGSGSGSGSGSGSKSRSQGLGQGESQSRVAEES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g260 ### # start gene g261 Scaffold_1 AUGUSTUS gene 1257272 1258693 0.09 - . g261 Scaffold_1 AUGUSTUS transcript 1257272 1258693 0.09 - . g261.t1 Scaffold_1 AUGUSTUS stop_codon 1257272 1257274 . - 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_1 AUGUSTUS CDS 1257272 1257441 0.88 - 2 transcript_id "g261.t1"; gene_id "g261"; Scaffold_1 AUGUSTUS CDS 1257586 1257609 0.68 - 2 transcript_id "g261.t1"; gene_id "g261"; Scaffold_1 AUGUSTUS CDS 1257685 1257799 0.68 - 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_1 AUGUSTUS CDS 1258073 1258693 0.2 - 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_1 AUGUSTUS start_codon 1258691 1258693 . - 0 transcript_id "g261.t1"; gene_id "g261"; # protein sequence = [MNGLSVKSGLFSHALPLAPATHSASSLLVGVQPQKLGSKQARCESYSLPFSSAYQHPQQVRSIEQADSIRIVPEVHRG # KGEIVPLIKKDAKDVSSYTFNYQRDTYSVAKCSSDSVTFIKLPYPSSGNPSLSSFLKPQGPKFGLSSQTAEQLKELYGLNEFNIPIPSFTELFSEHAT # APFFVFQACLDFNKSMTIPSNKIPDLLCRTMPLHHKPVDAKSKDKETKETKEAHSHEETTVPADILLLHVDELDRGVADGVPEPSLKTPDNGCLGVVL # RTGFGTAQGQLVRHVTQTHRSFSLPTNPTISRSAP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g261 ### # start gene g262 Scaffold_1 AUGUSTUS gene 1261709 1262575 1 - . g262 Scaffold_1 AUGUSTUS transcript 1261709 1262575 1 - . g262.t1 Scaffold_1 AUGUSTUS stop_codon 1261709 1261711 . - 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_1 AUGUSTUS CDS 1261709 1262575 1 - 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_1 AUGUSTUS start_codon 1262573 1262575 . - 0 transcript_id "g262.t1"; gene_id "g262"; # protein sequence = [MLFQSLVPFVAIALALVANSAPAIDPIFARGNALGYSHIFDARTPSSTRPGLADIYRRRQSNAQKRKKQAARLRNAAN # AANTQKLKPIGATSPPTETHHVSLTEAKLAPHPDGVPGEPHKPEAGAKAVPNPAAPHPDPVKEAEEKKKEEENKHNPNIPTPGEPHTEVKAGEVPRPS # TPAPPEQPAPPKTKEEEEKEAKEKADREAKEKAANEHPTEPAADAAPKPGKTDALISGLNAVTALANTANTFGSALHPGGASTGMGGEDAPGGNSMGG # MGGMGGMGGMGGMK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g262 ### # start gene g263 Scaffold_1 AUGUSTUS gene 1265059 1267160 0.75 + . g263 Scaffold_1 AUGUSTUS transcript 1265059 1267160 0.75 + . g263.t1 Scaffold_1 AUGUSTUS start_codon 1265059 1265061 . + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_1 AUGUSTUS CDS 1265059 1265067 0.76 + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_1 AUGUSTUS CDS 1265129 1265256 0.85 + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_1 AUGUSTUS CDS 1265306 1267160 0.99 + 1 transcript_id "g263.t1"; gene_id "g263"; Scaffold_1 AUGUSTUS stop_codon 1267158 1267160 . + 0 transcript_id "g263.t1"; gene_id "g263"; # protein sequence = [MKLLGIDARRTLETLNSSSASSGDPFPEVFLSDHRDLQTRFDLVIHVDLSTAKPRSPNYHETLDSGSASNATLSSISS # VLTQALGDRVRVIAILHPTPNTRPLSQAHPSTSHIIHIGLIYNPVHAWRQVDHGPNPASDPDPVAVEQFREFWGDKAELRRFKDGSIVESVVWDVKTI # DEKTLIPRRIVAFVLKRHFGIGEEGVRGWQEGFDGVLRLPESVSRFYVGENGLGVGVGFKAALGAFDGVVKAIKVLSSDEGGNDALPLSVMNISPTSE # FLRYTSVFSPVPLPDSIASVLSMNTRYLNPIEFVIEFERSSRWPDDLRAVQKVKLAFLEKIARGLMGRVPGLRAAVIVGDAAGTDDMNDVARLEIVTE # EGWAFVGRIWHDREAVLLDRIINNTASTLPHVTRKDKSQSQRQGKDYHTAIQARESYTRLYIHAPMHHRAIAKLCHHFPAFAGTVRIAKRWFAAHWLL # GGADGGGGYVSEEAVELLCAKFFVKEGWEAEMDRDIEEEEKDAEKIEQRKMVVPGSKERGFASLIQFIKEWNWDEQGEGIFVPLYESSSILGLKQPKA # VSSMSTGVWKIRTAMDEEGCIWTMFGPDAIIARRVRALAQATWGCLKGMEMNGMSGGGSVLVSKFILVFQYVSKLALMIRPYSIIPPMTTMLSST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g263 ### # start gene g264 Scaffold_1 AUGUSTUS gene 1268635 1269123 0.38 + . g264 Scaffold_1 AUGUSTUS transcript 1268635 1269123 0.38 + . g264.t1 Scaffold_1 AUGUSTUS start_codon 1268635 1268637 . + 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_1 AUGUSTUS CDS 1268635 1269123 0.38 + 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_1 AUGUSTUS stop_codon 1269121 1269123 . + 0 transcript_id "g264.t1"; gene_id "g264"; # protein sequence = [MAGELGARVWVVREIRVGRGAGGTRFVADEPFISNHLALLDNSEAMPPSVLGNMHIYDIFKPRPVMTRAQTEIGVSMH # PNNSTSSIFPTSTLDQLDNAIGGFGSGAKHYHKSKKERKQKGKKYHLNYEPPGGPRFTSASNVDENVDAQHAGTQVRFVNLLRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g264 ### # start gene g265 Scaffold_1 AUGUSTUS gene 1275921 1276696 0.83 + . g265 Scaffold_1 AUGUSTUS transcript 1275921 1276696 0.83 + . g265.t1 Scaffold_1 AUGUSTUS start_codon 1275921 1275923 . + 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_1 AUGUSTUS CDS 1275921 1276056 0.84 + 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_1 AUGUSTUS CDS 1276248 1276696 0.99 + 2 transcript_id "g265.t1"; gene_id "g265"; Scaffold_1 AUGUSTUS stop_codon 1276694 1276696 . + 0 transcript_id "g265.t1"; gene_id "g265"; # protein sequence = [MPSRTQAQSRANSKENTFFTTAQSFTPFSESISAIGQPHRCNRGFAIARCTGKQPQCHVTSQSPRDPPPHFNLDAGDH # NDQDPPVDPNNPGADNNNPDNDNLDDDSGSLLHGEPGEPGDPSGPGGPGGPCTPISPDIPNKQRAMLELLSGFKGSIETLGTIETLGTILAALGQPSD # SSESKSKVKEPMTRLNFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g265 ### # start gene g266 Scaffold_1 AUGUSTUS gene 1294087 1294371 0.41 - . g266 Scaffold_1 AUGUSTUS transcript 1294087 1294371 0.41 - . g266.t1 Scaffold_1 AUGUSTUS stop_codon 1294087 1294089 . - 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_1 AUGUSTUS CDS 1294087 1294371 0.41 - 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_1 AUGUSTUS start_codon 1294369 1294371 . - 0 transcript_id "g266.t1"; gene_id "g266"; # protein sequence = [MPWEKAEELQRRERAVILKETLVEKKARRVKMDVEIEASARLVEIHREAMLSAKKKLKELNFGKQLIEEREEHLALEE # QELIRSATMNDEQDVY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g266 ### # start gene g267 Scaffold_1 AUGUSTUS gene 1301394 1301780 0.67 + . g267 Scaffold_1 AUGUSTUS transcript 1301394 1301780 0.67 + . g267.t1 Scaffold_1 AUGUSTUS start_codon 1301394 1301396 . + 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_1 AUGUSTUS CDS 1301394 1301780 0.67 + 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_1 AUGUSTUS stop_codon 1301778 1301780 . + 0 transcript_id "g267.t1"; gene_id "g267"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEFR # GPLQWNLGWDHHNGGLPPWVTPNLPVVPWEVSHTPLPGEREDLPLDRYRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g267 ### # start gene g268 Scaffold_1 AUGUSTUS gene 1311753 1312355 0.57 + . g268 Scaffold_1 AUGUSTUS transcript 1311753 1312355 0.57 + . g268.t1 Scaffold_1 AUGUSTUS start_codon 1311753 1311755 . + 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_1 AUGUSTUS CDS 1311753 1312355 0.57 + 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_1 AUGUSTUS stop_codon 1312353 1312355 . + 0 transcript_id "g268.t1"; gene_id "g268"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVPQQTPEAPLRAPRTRVKLEEVKDEEYEASQPG # PHKLFPSDKDLGPDDPILMGSTNG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g268 ### # start gene g269 Scaffold_1 AUGUSTUS gene 1316189 1317097 0.54 - . g269 Scaffold_1 AUGUSTUS transcript 1316189 1317097 0.54 - . g269.t1 Scaffold_1 AUGUSTUS stop_codon 1316189 1316191 . - 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_1 AUGUSTUS CDS 1316189 1317097 0.54 - 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_1 AUGUSTUS start_codon 1317095 1317097 . - 0 transcript_id "g269.t1"; gene_id "g269"; # protein sequence = [MRTSAVSLPSLIAFIVAILPPSFIITIVILGAIIEAVIAFLRRGLDSDDLDVTVHNFRLALDYVQAARGVHGDMYMRS # ISSIQWFFNNAVDEDEGLYRMILEHSRFDSDSPFLTAAHHAGFVPPPDDSVEPPLHRRMLALSTALPHSDGVGRWEDIVPALPSIDQLTADWEQMMLQ # YIHHITDTPLSRIDTQGPMSSVEPANESLPEALVRQSPETPAALESTSSVRPHPQVPLFLPEQGSLTSPSPTPPPLFGSVANLVIDLTGDDDELYETE # EVGAGRFSVTREVIDLAASQDVVKDESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g269 ### # start gene g270 Scaffold_1 AUGUSTUS gene 1322639 1323025 0.61 + . g270 Scaffold_1 AUGUSTUS transcript 1322639 1323025 0.61 + . g270.t1 Scaffold_1 AUGUSTUS start_codon 1322639 1322641 . + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_1 AUGUSTUS CDS 1322639 1323025 0.61 + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_1 AUGUSTUS stop_codon 1323023 1323025 . + 0 transcript_id "g270.t1"; gene_id "g270"; # protein sequence = [MKLFTLPIPIDESESDSDSNSDVDKANQPNSPRLEHTPGPDIPVTEDESDEQPIAIRRPVRTRKPPGEWWKTKHPHLV # FLPIMMTLMILMTTTTGMQNLQHQPLPKWNLEIIESNAQFRSIQVGGGYE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g270 ### # start gene g271 Scaffold_1 AUGUSTUS gene 1332833 1333485 0.39 + . g271 Scaffold_1 AUGUSTUS transcript 1332833 1333485 0.39 + . g271.t1 Scaffold_1 AUGUSTUS start_codon 1332833 1332835 . + 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_1 AUGUSTUS CDS 1332833 1332850 0.93 + 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_1 AUGUSTUS CDS 1333003 1333006 0.98 + 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_1 AUGUSTUS CDS 1333073 1333485 0.41 + 2 transcript_id "g271.t1"; gene_id "g271"; Scaffold_1 AUGUSTUS stop_codon 1333483 1333485 . + 0 transcript_id "g271.t1"; gene_id "g271"; # protein sequence = [MTRVNILVITRSDEALCNVCRKCSITTVCSTEFAYNNAPNASTGITLFFANKGYHPNITVRPEVDMKSDLARDFIVNL # DELHVFLREEILLAQSHYKEQADRKRISHPEFPIGSKVFVLAKHIRSTHPTEKFSEKYLGPFKVIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g271 ### # start gene g272 Scaffold_1 AUGUSTUS gene 1334901 1337605 0.21 + . g272 Scaffold_1 AUGUSTUS transcript 1334901 1337605 0.21 + . g272.t1 Scaffold_1 AUGUSTUS start_codon 1334901 1334903 . + 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_1 AUGUSTUS CDS 1334901 1335585 0.46 + 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_1 AUGUSTUS CDS 1335675 1337605 0.27 + 2 transcript_id "g272.t1"; gene_id "g272"; Scaffold_1 AUGUSTUS stop_codon 1337603 1337605 . + 0 transcript_id "g272.t1"; gene_id "g272"; # protein sequence = [MAPERSTSPDPLASYDISPTAPQIALDKAQIASDKPLQRSQTLPSTSSTQISLDKGKGRAQPAQSTSYIASRPSPELR # SVRIRPRTLQERLQVIPEAGTAPQVTGSEHREASIALSTHSHHSSHQIPLQDRISAAPTPPDALEQVRLTAEALGQVVEQYRNNELSPNDAFRALRSL # TDDPTVVRDFIGQIQEIQRDHLRASRERVAAVKAARVAAAAASKSRISEDHLSEADQMEQDAHQDRSNSLQQALLKLVGQTQSSSSPGTSSGLPPSLL # EAAPHLSALTSSDILSPTVSETWKLRMLFTVDSHVDTTVSLLSAQPFTDPYLSPCSKLIVKDRYVDFEKIHASITSYTSIFDDSTTFGSEYKLVKKEH # SIRSLPVTSEAQWLRVFDAWLAPVLKIYPHRQSELSAYKASIMEFFQGAHQIPLLPLEWTGRRARKLLTLPLTLEMQKTSDFCCLRNFSVLENVPAPL # LALLLLQSARILLVSFGMKGNALPHVQIAASMASVVSVESPTKQLTPNPAMRSLSTVDQRVKTALAGPRSLAGTKRAAPESNSGSSNSIPRFRRGYLW # STSSSSSEIIPPSIQSTYTAPPLPSPPEHLLNNPQIQSTLKAMAPYIKVETPFNVDRLENLLASHPNQPFVASVMRSLREGFWPFYEAEWEVESKQKL # DNYVSEPQDFAALRAHRDQEVAAGRWSEALPEDFVLLPGMKVSPMFVVWQKGKPRVVMDHTGSGLNDNIPKAEGKVKYDDMHTFGQVLNDILKEHPDE # ELILFKSDVSKAFLNLPGHPLWQLCQVVEVDGRYHIVRRLVFGTRTSPRCWCSLSSLMCWFGSEKLGIIGLHVIWMISMAGTLRGICYCSMINSALRD # RSSSLYSGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g272 ### # start gene g273 Scaffold_1 AUGUSTUS gene 1340504 1342000 0.17 + . g273 Scaffold_1 AUGUSTUS transcript 1340504 1342000 0.17 + . g273.t1 Scaffold_1 AUGUSTUS start_codon 1340504 1340506 . + 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_1 AUGUSTUS CDS 1340504 1341137 0.6 + 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_1 AUGUSTUS CDS 1341271 1341549 0.27 + 2 transcript_id "g273.t1"; gene_id "g273"; Scaffold_1 AUGUSTUS CDS 1341663 1342000 0.43 + 2 transcript_id "g273.t1"; gene_id "g273"; Scaffold_1 AUGUSTUS stop_codon 1341998 1342000 . + 0 transcript_id "g273.t1"; gene_id "g273"; # protein sequence = [MEFTLNGSVLFTASVNNKSVGYLNGLTISNGTEDESAHIGGTTLPLNLELWHRRFFHYNYGDVSKLSKNKMVEGFKLE # SSAKPDPVCEPCLGGKMHANPFPSTETRASEVLELVFTDVHDTGIISHEGYRYWIPFICDKARFRAVIPMKKKSDAFAAFKRFKAWAEKVTGLKVKIL # RHDKGGEYISKEFEKFLQDEGMKYNVQLEIDLTKWTVPDVTPYEVFYKKKPNVENLRVWGCMAYVHVQKDKRLHLGSHMEKCVFIGYPEGVKGWKFWN # PVTKKVIISERADFDERYMYASKSPDKPTLHSESNSEVDKGNAPNSPRLEHTPGPDIPVTEDESDELPIAIRRPARNRKPPGEWWKTKPSSSRVPAPN # DDSDDSNDDYYGDAELASISTQQVEPRNYREAMHSSEAFKWEEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g273 ### # start gene g274 Scaffold_1 AUGUSTUS gene 1342805 1343320 0.66 + . g274 Scaffold_1 AUGUSTUS transcript 1342805 1343320 0.66 + . g274.t1 Scaffold_1 AUGUSTUS start_codon 1342805 1342807 . + 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_1 AUGUSTUS CDS 1342805 1343320 0.66 + 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_1 AUGUSTUS stop_codon 1343318 1343320 . + 0 transcript_id "g274.t1"; gene_id "g274"; # protein sequence = [MINIPYMSAVGSLLFLAMILRADIAFATGVLTRFNSNPGPAHWLAVKHLLRYLKGTIDYELELGPDPTAPDLITAISD # ADLGGNKDNGKSTTGYIIKIGSGAVSWSSKLQPVVTLSSTEAEFVASNAVGKEVLAIVLSSPSLVIKSHLLPLSMSTTNPPFKLLKIRNITDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g274 ### # start gene g275 Scaffold_1 AUGUSTUS gene 1347446 1347910 0.46 + . g275 Scaffold_1 AUGUSTUS transcript 1347446 1347910 0.46 + . g275.t1 Scaffold_1 AUGUSTUS start_codon 1347446 1347448 . + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_1 AUGUSTUS CDS 1347446 1347463 0.61 + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_1 AUGUSTUS CDS 1347616 1347619 0.47 + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_1 AUGUSTUS CDS 1347686 1347717 0.47 + 2 transcript_id "g275.t1"; gene_id "g275"; Scaffold_1 AUGUSTUS CDS 1347758 1347910 0.5 + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_1 AUGUSTUS stop_codon 1347908 1347910 . + 0 transcript_id "g275.t1"; gene_id "g275"; # protein sequence = [MTRVNILMITRSDEALCNNYMLGFNPDTLMRCKWYYAKIPSTKAKEDSKSLRSVVWMATVTICKVLIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g275 ### # start gene g276 Scaffold_1 AUGUSTUS gene 1364853 1365110 0.26 - . g276 Scaffold_1 AUGUSTUS transcript 1364853 1365110 0.26 - . g276.t1 Scaffold_1 AUGUSTUS stop_codon 1364853 1364855 . - 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_1 AUGUSTUS CDS 1364853 1365110 0.26 - 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_1 AUGUSTUS start_codon 1365108 1365110 . - 0 transcript_id "g276.t1"; gene_id "g276"; # protein sequence = [MINVPYMSAMILCADIAFATSVLTCFNSNPRPAYWLAVKHLLHYLKGTINYKLELGPDPTALDLITAISDADLGGNKD # NGKSTTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g276 ### # start gene g277 Scaffold_1 AUGUSTUS gene 1368387 1369046 0.65 - . g277 Scaffold_1 AUGUSTUS transcript 1368387 1369046 0.65 - . g277.t1 Scaffold_1 AUGUSTUS stop_codon 1368387 1368389 . - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_1 AUGUSTUS CDS 1368387 1369046 0.65 - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_1 AUGUSTUS start_codon 1369044 1369046 . - 0 transcript_id "g277.t1"; gene_id "g277"; # protein sequence = [MPPRTRAQSRANSKENTFFTTAQLFAPFSEFISAIGQPRCHNRSFSLATVPMSTLPETMEENQQFEYCTLYTGDGQPV # QVLTPCRGQPPVVAPAQGRSITQIESPILQAIGHRTGKQPQCRATSQSPRDPPPHFDLDTGDHDDQDPPVDPNDPGADNVNLDDDSSGLPCGEPSEPS # GPSGPGGPSGPRTPIPPDIPTSNILCWNCSQASRVLSKPSVPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g277 ### # start gene g278 Scaffold_1 AUGUSTUS gene 1374945 1375493 0.65 - . g278 Scaffold_1 AUGUSTUS transcript 1374945 1375493 0.65 - . g278.t1 Scaffold_1 AUGUSTUS stop_codon 1374945 1374947 . - 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_1 AUGUSTUS CDS 1374945 1375493 0.65 - 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_1 AUGUSTUS start_codon 1375491 1375493 . - 0 transcript_id "g278.t1"; gene_id "g278"; # protein sequence = [MESQQSQMNNGNNGGFLDEEDRAVIKLHSAALASPHKAASTIIHFLTSRSGKTKTTKNSNEAEYRAIFDALIQDCLSV # WCWPEWPSASILLSVAVKGMVRSLEEENRDKNSTPGDKDKDSPSDNSVGKSMALDHLGVIAARVRSLVQKVQSQEKEYKEGSHLLPSNREGTARARSR # SNHCAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g278 ### # start gene g279 Scaffold_1 AUGUSTUS gene 1375789 1378264 0.44 - . g279 Scaffold_1 AUGUSTUS transcript 1375789 1378264 0.44 - . g279.t1 Scaffold_1 AUGUSTUS stop_codon 1375789 1375791 . - 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_1 AUGUSTUS CDS 1375789 1378060 0.57 - 1 transcript_id "g279.t1"; gene_id "g279"; Scaffold_1 AUGUSTUS CDS 1378119 1378264 0.44 - 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_1 AUGUSTUS start_codon 1378262 1378264 . - 0 transcript_id "g279.t1"; gene_id "g279"; # protein sequence = [MAHSEYANEIQYLRSNQAQGNQGIVSRDSGYWERARDQAVALLNEQAGGSYPYPPPSQWTTPHTTLPNLFSPYHTPDI # AGVVLSNGYPTPPALPSIPPLASSYTSSLAGALGPTMLPQNQQRQQLPQHPQHNLHLLSSGALPQHPTHQQYTPAESASFFNDILSRKSNQILQNPVN # QPGPFVAESRNLQNDHPSPMKKRKVGMFVEVSSPRKKSNLGNIGIDNHDASQIPSTPSKLRQKLASSSAPSIFPKTPSSTHSLALSVPMTPSTTGLLT # PQSARASSLLSTNSLKRKTLTLDSIESLPALQKPFITPTTGGRTKKAGLHHANTSDFELEDDEDELNLTSSPLKPLLYDSALKSKHKAGRDGHLTHDR # DERSPLDKLISLIQEIFEAEDGLPADPDATDLSQGGVFNPDSQDPSKPQLSARIIRKLTMHFGQIRGARGAGKGVHSSPTKGRGSRNGKLNDIGCDVL # GRLLRIIARSVKIGGEADPFGLLSGTRGDSLMSTHKTPKKKQSGTPVGKGGLDVVESEEKLETLGTLAVERGQSKEPKTPKKDKWKGKSSAGCSIEQP # SAVDLDVLIRKLTQSRDGVLAAESIIALLGGESVKSSKGGEMLSKQLYSEEIILDCFDVVKSALEGGIYPFVEACSGVGSGLLMYLVNGATTSASGQS # SSPYSNRPPSTSTQSTSAKAEASRHLLSEIFAALSATLPRISVLVGGAGTVKDNEIPMSDAVVIKAVYVGIGPFFVSSDEGSHTLKQERDRDEDNRGK # GKAKIRGKKVLGGSLLTATFGKSAMRGLRMDALGLIRSVSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g279 ### # start gene g280 Scaffold_1 AUGUSTUS gene 1381196 1382765 0.38 - . g280 Scaffold_1 AUGUSTUS transcript 1381196 1382765 0.38 - . g280.t1 Scaffold_1 AUGUSTUS stop_codon 1381196 1381198 . - 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_1 AUGUSTUS CDS 1381196 1381789 0.69 - 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_1 AUGUSTUS CDS 1382169 1382765 0.4 - 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_1 AUGUSTUS start_codon 1382763 1382765 . - 0 transcript_id "g280.t1"; gene_id "g280"; # protein sequence = [MTPSDSPEPKKSRPALDVDPSNWEIKSEDAKVQLPSIFTTFEDDNTLRPPANEFRRASLPTLTSDRIRHSPYPPPSLR # QSYAPTTQSSLAAYTFPPSNPADDDKNRSKVSTDLSYSITAGYDSYPTPGLSTSSNYGSPSDFNPGAYPDADSNWHSSPSGIVRPNSTPGQLSAPAVK # YDESLRHASFSAPTQAHMFAVRLLCSSNPRHAIQARRRILAPARPSTNPTTTAPFPPTGRSTSLSGLLDPLGRRASLPATTPDSLNLYHPMSLPSMPG # GHSSDYIGSGRIHGLPQPRPHHHQMPGGNLDYPSTGGRNMNIYPNSMQQSYMNSSVPMSAPPSLSGNPFSTQGGNQSMYSNSAGYLHSPRLPALGQDQ # PHYFSDGTPPNNGSAPGSGYGTPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g280 ### # start gene g281 Scaffold_1 AUGUSTUS gene 1385753 1386826 0.36 - . g281 Scaffold_1 AUGUSTUS transcript 1385753 1386826 0.36 - . g281.t1 Scaffold_1 AUGUSTUS stop_codon 1385753 1385755 . - 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_1 AUGUSTUS CDS 1385753 1386826 0.36 - 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_1 AUGUSTUS start_codon 1386824 1386826 . - 0 transcript_id "g281.t1"; gene_id "g281"; # protein sequence = [MHDMAPSAPSSSSSRLSPLDNDLKRYVSSSTTSSGTTLTTSSVPSYVKHSGPAHIRTIAPSEVPPLDRLGNMMFDRVM # MKWVKSSAPLDEDHSLLEEISEDPFGDIESLKDDSGPTVEDSTAALEEHVDLNHSELSLVEELSEIDDTEEMELTSFETDHPNSRLVHAMSDFITNDG # AETSDSENDTVAHEPFNPIEYDSECEEDEQTNEQSRAQDDKEEDDDANGLIIAAPSMIPAISRSPGTPDRPISSPSSMRSAMKTPASVLKDVSVARYR # TPQRKSKHRRSVSFSDGKRDGPIRGLNKNAEFDDVPGGSRIGFVPSVRSRRIANMLVALEDSGKCHVICRPYFQPKILILRYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g281 ### # start gene g282 Scaffold_1 AUGUSTUS gene 1387231 1388199 1 - . g282 Scaffold_1 AUGUSTUS transcript 1387231 1388199 1 - . g282.t1 Scaffold_1 AUGUSTUS stop_codon 1387231 1387233 . - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_1 AUGUSTUS CDS 1387231 1388199 1 - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_1 AUGUSTUS start_codon 1388197 1388199 . - 0 transcript_id "g282.t1"; gene_id "g282"; # protein sequence = [MFNVSGTSRPAWQTEELEDEWIEAEAEGGEYEDEDQFNGTRSISFTAPLSTQIHTITNTSSPVSSPEPMGTFLVHQSI # PSVPLLPKTPGRNKKANIKDFFSPMPLERMFEPPSPPQPSSPQRPPRSPGEDKIDEIMETDIPNMVSFDGRKPSVGCQFTFSAPRDVFLNLDNRPQAE # STPGNPTVRTTNAPPSTDPPLRLFQFQYDTYTRDHLSAMVDSIAINPALGSGATNSPASLDQGLSRVSEATGISSLNSHLRSAKRVKLSPKSDFLGNG # NSPRPKLLGKDYVGESRSLMQQIKQARDFSTISTVASAQERDTSDMGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g282 ### # start gene g283 Scaffold_1 AUGUSTUS gene 1392167 1392622 0.25 + . g283 Scaffold_1 AUGUSTUS transcript 1392167 1392622 0.25 + . g283.t1 Scaffold_1 AUGUSTUS start_codon 1392167 1392169 . + 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_1 AUGUSTUS CDS 1392167 1392622 0.25 + 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_1 AUGUSTUS stop_codon 1392620 1392622 . + 0 transcript_id "g283.t1"; gene_id "g283"; # protein sequence = [MVHQHGLSFNLKPFSSQDIPIIARDATFLISLAAEEFIKRLCQAGQKAAEKERRTTVQHKDLGEHRLLESISMLFPTN # NLDPATVVRRADEFMFLDGSSSSQKIHLHSHGPNIHFNSRNYFTQPTRTSETSSKSSGSQWHSVTSWFWANAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g283 ### # start gene g284 Scaffold_1 AUGUSTUS gene 1395000 1395371 0.52 + . g284 Scaffold_1 AUGUSTUS transcript 1395000 1395371 0.52 + . g284.t1 Scaffold_1 AUGUSTUS start_codon 1395000 1395002 . + 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_1 AUGUSTUS CDS 1395000 1395371 0.52 + 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_1 AUGUSTUS stop_codon 1395369 1395371 . + 0 transcript_id "g284.t1"; gene_id "g284"; # protein sequence = [MNLQGSPANHGLNEIDSQIQASALKAARNSMLLPSDIHFHRTMDAEFSKDLDIFSSRILSVANQVLALMGTADISTKG # QSKLETEDDVVDNFHSIVVDTMDRMMEKTVRNIPYQVEKSYTSWH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g284 ### # start gene g285 Scaffold_1 AUGUSTUS gene 1396423 1397157 0.31 + . g285 Scaffold_1 AUGUSTUS transcript 1396423 1397157 0.31 + . g285.t1 Scaffold_1 AUGUSTUS start_codon 1396423 1396425 . + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_1 AUGUSTUS CDS 1396423 1397157 0.31 + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_1 AUGUSTUS stop_codon 1397155 1397157 . + 0 transcript_id "g285.t1"; gene_id "g285"; # protein sequence = [MLDYARSDTHFLLYIYDNLRNALLDRAVSPSEDNLEIEGTSYPQAQALLRQVLAKSEVTASRVYEKECYDMERGSGGN # GWDTLAKKWNKIHLYVNSPSSKQKDIYRSIHMWRDEVAREEDESVRHVSISLVRNINETFELRYILPNHYLIQLAEHPPADMAAMLKIFHFVPPVLKR # RAKELLNIIREVIERYDTSGEAKSLQDVVVLEAPPDAMVVEQQSSPIPTESLWTLGKWCAIHRYARLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g285 ### # start gene g286 Scaffold_1 AUGUSTUS gene 1403198 1403644 0.14 + . g286 Scaffold_1 AUGUSTUS transcript 1403198 1403644 0.14 + . g286.t1 Scaffold_1 AUGUSTUS start_codon 1403198 1403200 . + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_1 AUGUSTUS CDS 1403198 1403644 0.14 + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_1 AUGUSTUS stop_codon 1403642 1403644 . + 0 transcript_id "g286.t1"; gene_id "g286"; # protein sequence = [MGIVLLDHSTSDILFLLKGADTVMAPLVQRNDWLEEETGNMGREGLRTLVVARKKVGKEVWAAFESEYAVASTSVGGA # GGGSGDATTDGAVSRAEAQAQVIAKYLEKDMELLGLTGVEDRLQDEVRSTLELMRNAGVKVWMLTGDKVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g286 ### # start gene g287 Scaffold_1 AUGUSTUS gene 1405868 1406938 0.89 + . g287 Scaffold_1 AUGUSTUS transcript 1405868 1406938 0.89 + . g287.t1 Scaffold_1 AUGUSTUS start_codon 1405868 1405870 . + 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_1 AUGUSTUS CDS 1405868 1406938 0.89 + 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_1 AUGUSTUS stop_codon 1406936 1406938 . + 0 transcript_id "g287.t1"; gene_id "g287"; # protein sequence = [MGQSQSDSNDSRNRRVQTSPLSADILSAGDSTDGRRFLAQPQLTPSGKTTVRSSGLTRRRKAVQRRLSSIVKPKLEPE # ATSSRARVNEGRQLAQTDIPEASGHRSAWRRSVRFVKSRRWNKASDHKKDDGRERISISDSNATLPISISSPQSSSSNSTVSIPACGSDSVTTSQPPE # TSVPNSDTAILGSADIPTILTPALSVPPLSGEESSSDPLAVHTESIAALSSPQAAGEMETTDQFAVATAENPIVVASNANSGPTSENVTVLLEPNSTS # TATATVPVSPARPQFPPSGTLVVVQGVVHTSDVQMPTETSAPLLSQTQNHNPNPTAHHCGSSANHGRFQNGPKGTQLCFIRT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g287 ### # start gene g288 Scaffold_1 AUGUSTUS gene 1407919 1408569 0.94 + . g288 Scaffold_1 AUGUSTUS transcript 1407919 1408569 0.94 + . g288.t1 Scaffold_1 AUGUSTUS start_codon 1407919 1407921 . + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_1 AUGUSTUS CDS 1407919 1408569 0.94 + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_1 AUGUSTUS stop_codon 1408567 1408569 . + 0 transcript_id "g288.t1"; gene_id "g288"; # protein sequence = [MYLLGGDGRTTREHGEPAILETDNSVTSRDERLPRPLREPEPEDDTAEDSIPSLHDVSDSDDDTESNNSQGSSLDSFA # SVSPADEAAQHPFNVSESPNDPSIPRPRINYWRLHRFPPIPAARAHAAADNVAQNMRSGLGGLTRAATLASTPTSRSVTSTPAGEDSGTGATPSLSRD # SVVQDSPNTGSANVVVPVIIVGLQSEVLFGRRSQLLPQGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g288 ### # start gene g289 Scaffold_1 AUGUSTUS gene 1410549 1412263 0.95 - . g289 Scaffold_1 AUGUSTUS transcript 1410549 1412263 0.95 - . g289.t1 Scaffold_1 AUGUSTUS stop_codon 1410549 1410551 . - 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_1 AUGUSTUS CDS 1410549 1410992 1 - 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_1 AUGUSTUS CDS 1411040 1412263 0.95 - 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_1 AUGUSTUS start_codon 1412261 1412263 . - 0 transcript_id "g289.t1"; gene_id "g289"; # protein sequence = [MGFSITQARTALASTDSGQNVQAALDILISNGAIGPGEDYGDEAGSFSGRNNSQNQRTPSPQEEPKPRLRRDRQIIQE # RQRERNTSSPSELGGLQADKILAQASEIGFSLFNRANAAWKEGKERVQKVYEEKVAATAEGSTSRRGSGRSTPLAMATKPKWMQDNEGLPDTMIDHTK # KEARPVEKPSFSTHTEVVDLFSDTSSPESSTSQLTSQPSTLSVGSSNGVYVSKFRHAKPKVSDTTSGSASLSPHPITLVSAPESTIALSQESKASGAH # FYKLGDFPAADTAYTRAIEALPAGHALLIPLYNNRALVRLKVGDVQGVIADTKKVEELIGGVGTVREELRKGDLGKIPVKGSKQGSGDDVVINMPDAL # IKAWKRRAEAMEGREKWEDAGKDWEKVASAEWAGKAQGGSSHHTPKFKPSPPIRPPSHQVPSIPSQALNALRAANEAAEVEDSHRYRLKDGVDARLQS # WKGGKENNIRALLASLDTVLWPELGVQKLSMAELLNKGQVKVKYMKCIAKVHPDKLNEGNSTLEQRMIAAGVFGALNEAWNAFKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g289 ### # start gene g290 Scaffold_1 AUGUSTUS gene 1412404 1413204 0.98 - . g290 Scaffold_1 AUGUSTUS transcript 1412404 1413204 0.98 - . g290.t1 Scaffold_1 AUGUSTUS stop_codon 1412404 1412406 . - 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_1 AUGUSTUS CDS 1412404 1413204 0.98 - 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_1 AUGUSTUS start_codon 1413202 1413204 . - 0 transcript_id "g290.t1"; gene_id "g290"; # protein sequence = [MSDSFADLWNSAVPSKPTPQPQKLGSLSSQSNPPYPRQTQNDLFAQLASRGSSVSNSRSATPPSAIPASSHKGFAKPS # SQNSNGDAFSGLFGAGSSLASNRSTANMTIAERAALVEKERLERSIQQRQVPNPTHSTAWDGLDSLGSKTFATSPTNSHLPLDHDWTLTAPSVLKSVV # LPPVLKPEDDWGLANLANTSAPATTSKPSHSGAVWDLDEFSTLDSTSRGLGPGKWDGVTANDGPDDILGDLSRPIEAIQRENMKTVVVMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g290 ### # start gene g291 Scaffold_1 AUGUSTUS gene 1415446 1416195 0.98 + . g291 Scaffold_1 AUGUSTUS transcript 1415446 1416195 0.98 + . g291.t1 Scaffold_1 AUGUSTUS start_codon 1415446 1415448 . + 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_1 AUGUSTUS CDS 1415446 1416195 0.98 + 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_1 AUGUSTUS stop_codon 1416193 1416195 . + 0 transcript_id "g291.t1"; gene_id "g291"; # protein sequence = [MPINRLKPKNPPLPNNGDAIPILDKLRYDDVHAKAFQQVFGKTCVCKDLTVAAAYVKSHGINTITLDGDKVDRKGALT # GGFHDIRRSRIEAIKAVTSWRTKYEEDTKKSKETKTAIVEYDQKITQLAGKMSVLSAQQNQIREARERLLAEGVMLTKEKEKLSGRLGKLEIDVQELE # AELASLQTKHTGYEAELKTPMMQSLSAEEQKLIETLGVEVEQKRRELVELAKAKTSVSILYGSPCTALNFDFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g291 ### # start gene g292 Scaffold_1 AUGUSTUS gene 1419752 1420078 0.6 - . g292 Scaffold_1 AUGUSTUS transcript 1419752 1420078 0.6 - . g292.t1 Scaffold_1 AUGUSTUS stop_codon 1419752 1419754 . - 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_1 AUGUSTUS CDS 1419752 1420078 0.6 - 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_1 AUGUSTUS start_codon 1420076 1420078 . - 0 transcript_id "g292.t1"; gene_id "g292"; # protein sequence = [MKDNPHAEWEMSHTAVLERLKGENQALLKRLIDIEAVLKEAGAAASQASETKSDVSVSTLVPRESLDIAVKDKEDLED # VLKQKEKRLLRLQQVIYPFKYFHNRIKHMQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g292 ### # start gene g293 Scaffold_1 AUGUSTUS gene 1420655 1421984 0.65 - . g293 Scaffold_1 AUGUSTUS transcript 1420655 1421984 0.65 - . g293.t1 Scaffold_1 AUGUSTUS stop_codon 1420655 1420657 . - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_1 AUGUSTUS CDS 1420655 1421789 1 - 1 transcript_id "g293.t1"; gene_id "g293"; Scaffold_1 AUGUSTUS CDS 1421887 1421984 0.65 - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_1 AUGUSTUS start_codon 1421982 1421984 . - 0 transcript_id "g293.t1"; gene_id "g293"; # protein sequence = [MSTTSNSSSLFTSSSTSKSHSNNISASTSGSSSDVESYPDSSLPNTKRHLRTTINNNLNAAAVERKLAILQTNCAELE # KKVREKDQRLDLLEKDRRWLNDRETEEREAREREGKEAREREVKLKNELAAAKISLSNLEVSHAELQDAHSKLERSRNHEVSLLKTQLEETQKQAMFL # EARVEEEKNAAKIAASNIASASSSTPSLSQSTSSIPDTDNRLLTAELKRQATYLRQLESTNTRLNADVVVLKSDNAILRDRNATVEVLKEEKRGLESR # LKMKEVEVEKLVREVVRRDHRSSSSKRSSLPLNPSTLATHLGLDQDDVDASVGVNDSLKDLPHPTVKEISELAALRLEHAALLDQHGTTLSELAALRG # EKEALLQQTSSRGNLAVPEVHSQNIIVRIDDYLLHIRH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g293 ### # start gene g294 Scaffold_1 AUGUSTUS gene 1427055 1429595 0.24 + . g294 Scaffold_1 AUGUSTUS transcript 1427055 1429595 0.24 + . g294.t1 Scaffold_1 AUGUSTUS start_codon 1427055 1427057 . + 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_1 AUGUSTUS CDS 1427055 1427215 0.67 + 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_1 AUGUSTUS CDS 1427361 1427944 0.74 + 1 transcript_id "g294.t1"; gene_id "g294"; Scaffold_1 AUGUSTUS CDS 1428039 1428221 0.4 + 2 transcript_id "g294.t1"; gene_id "g294"; Scaffold_1 AUGUSTUS CDS 1428526 1429595 0.87 + 2 transcript_id "g294.t1"; gene_id "g294"; Scaffold_1 AUGUSTUS stop_codon 1429593 1429595 . + 0 transcript_id "g294.t1"; gene_id "g294"; # protein sequence = [MKPLLPLIYFSALLFSLLVSPVDAVHSSTEHSFARRSMSHAKRRTVLGSSSSSFGVGDLLGATSTTTSSSPTSASSAP # TASTSTAGSSPAPVASSSSSSDSSSSSSSSSSTNVNSVSPSSSSSSTSSSASSSASPTSSSSSSTSSSTSSTVFSNSLPTTSVLDATSTTAVPSTSVV # SATSSDSGLLPSILSSLLPSVTLPSTTTSAAESDSTTAASTSPVDSDPTIAASTTSAADSDTATSTASTTDPASTTGATDTDSVVTSPTASSTTVLSA # TSTTDPGLLSSVLSSLLPSVTLFPSTVSSVADTSSIALPQPSTSGDTTTATSGSLSLSLPVSIPTISATTSDSALPSSIISSLSSVSTSTTDTSPNSL # STTVSGSQSSFSASTIDSASITSSTDSASDTTTTGSASIFSTTGSASVSSTTGSASISSTTGSVSVSSTTGSDSASVTSSTGSASILSSTGSASVTAN # STSIPASVSQSSFSVSGSTTVSLSASSTVTISFPSGSVSSTATVNGTTTVVSTSVTTALTVVSVPSDLSFVLTQTTLEVASVSSSATSQTLSNPDQAT # TTFSQTTLSASAPLATAALPSSLPYRILPQDQLASNEDLSGYTLVSLLFDLQLNWPFVVSSPDSSSQLFAYMPVILQNSLGLTGLSLLRFKNSNINA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g294 ### # start gene g295 Scaffold_1 AUGUSTUS gene 1429691 1430170 0.88 + . g295 Scaffold_1 AUGUSTUS transcript 1429691 1430170 0.88 + . g295.t1 Scaffold_1 AUGUSTUS start_codon 1429691 1429693 . + 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_1 AUGUSTUS CDS 1429691 1430170 0.88 + 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_1 AUGUSTUS stop_codon 1430168 1430170 . + 0 transcript_id "g295.t1"; gene_id "g295"; # protein sequence = [MYLVYIPSSSVSNLQDQIKAQQSAFYTGVDNSVAQQLASLVNSGWNLLSIAAPDDSGSTGSSSSDSDTGASSSDNKSK # EDAIIGVTASLGGIAICVLGFLIYRSYKRRKELAHRRLSEPTGTAGYRPEGREFDQDSVGGQRRRSFYFAEDSLRDIKVTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g295 ### # start gene g296 Scaffold_1 AUGUSTUS gene 1431340 1431804 0.77 + . g296 Scaffold_1 AUGUSTUS transcript 1431340 1431804 0.77 + . g296.t1 Scaffold_1 AUGUSTUS start_codon 1431340 1431342 . + 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_1 AUGUSTUS CDS 1431340 1431804 0.77 + 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_1 AUGUSTUS stop_codon 1431802 1431804 . + 0 transcript_id "g296.t1"; gene_id "g296"; # protein sequence = [MLNLSECILIFRSKFWDAHNIRLKSCHLSHRRGILSILGLSDSPDLTRNHVQKAFLQWDADAFEEKAAESGMCAFVSR # TFEEWDRHPQGLALKNVPPVIVTKIADAPKRQISFLSSYEHPLQNVKVLDVSRVLAGPVAGRTLAGQTYAFYTGFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g296 ### # start gene g297 Scaffold_1 AUGUSTUS gene 1432847 1434443 0.91 - . g297 Scaffold_1 AUGUSTUS transcript 1432847 1434443 0.91 - . g297.t1 Scaffold_1 AUGUSTUS stop_codon 1432847 1432849 . - 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_1 AUGUSTUS CDS 1432847 1433717 0.97 - 1 transcript_id "g297.t1"; gene_id "g297"; Scaffold_1 AUGUSTUS CDS 1433780 1433921 0.91 - 2 transcript_id "g297.t1"; gene_id "g297"; Scaffold_1 AUGUSTUS CDS 1434011 1434443 0.96 - 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_1 AUGUSTUS start_codon 1434441 1434443 . - 0 transcript_id "g297.t1"; gene_id "g297"; # protein sequence = [MQTSLGNDRTAHIIESLHAILKPFLLRRLKSDVETSLPPKKEYVLYAPLSITQREAYDKVLDGTLRAYLMQSKEENKG # ADELLPEVDGPRKLRTQTNKGRPSYLVEEDDDVYFKNLETGENERQQAEREADLTQLRETHRKDLALMQLRKVCSHPFLFDWPVDPTTLQPILNDELV # AASGKMMVLDRLLTELGKFHAVNTSSTIMAHSLPSQDWARELKGWIICRIDGSSSPVERREQMSAFQTGGDSPGAPHLFLLSTRAGGLGINLVAADTV # IFYDQDWVCSHSSILLSISERPSKNPQMDAQAQDRAHRIGQTKPVLIYRLVSAHTIETKIMQRATEKRQLEALVIAKGHSFWVLSLMAFSYSFLGKFR # MPSAAAQRGGKSETIAEMAASLLRLEGEKIDVVPNTNEGKANVLTDEDLDSLLDRSPEVFTDRGKGWTSANPPGKSVVESSKKAAFAVYDAPADEGND # ALAMMLGEDDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g297 ### # start gene g298 Scaffold_1 AUGUSTUS gene 1443349 1444041 0.91 + . g298 Scaffold_1 AUGUSTUS transcript 1443349 1444041 0.91 + . g298.t1 Scaffold_1 AUGUSTUS start_codon 1443349 1443351 . + 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_1 AUGUSTUS CDS 1443349 1444041 0.91 + 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_1 AUGUSTUS stop_codon 1444039 1444041 . + 0 transcript_id "g298.t1"; gene_id "g298"; # protein sequence = [MPPVPPAISLLIFGFALPVALLDVDEPNFGVTNGGNGHGLAHYQATRHPVAVKLGTITPEGNADIYCYLCDDSKLDPS # LSNHLAIFGINLSAQTKTELSVTEMQIEHNLKYDFSLTNEDGKALEPIHGKGLTGLRNLGNSCYMASVLQTIFALPEFKERYYALESARAQDHAEICP # EPLPADCVECQMRKIADGLLSGRYTNPALPISMLHPMLELLILVGSSPHLNSGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g298 ### # start gene g299 Scaffold_1 AUGUSTUS gene 1450139 1451224 0.68 - . g299 Scaffold_1 AUGUSTUS transcript 1450139 1451224 0.68 - . g299.t1 Scaffold_1 AUGUSTUS stop_codon 1450139 1450141 . - 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_1 AUGUSTUS CDS 1450139 1451224 0.68 - 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_1 AUGUSTUS start_codon 1451222 1451224 . - 0 transcript_id "g299.t1"; gene_id "g299"; # protein sequence = [MSNKSTIAFIDRPKDAPRPDLFPVTLVWQDEQTLLLAWADFIKVARVRTRETGFMVEVIKVFQLDSMIAGIMPHPMPI # AIASAPGSRPQSIVSTTSSSRSNNTNGLLKPNSSQPNNPPPLTSFLLLTFSPPETALLDLDVLLTSDTDRTKQAKALSERPELRIISRGGEELAADAL # SVSGYQAWTCGDYKLAGPISADAELARTLDPASAKSPTVNLTDWYVVLSPRDLILVRPRDEHDHVAWLVERERYGEALEALEVIEHSLGSSKKNEEGD # SANGFSEKVVNGVKLTSVDVGQKLAESLISEGESVSFIDYLFTHFYHRTLGSFPKAAELLPKICVRDPKRWEDWIFVFAEKRQLQVC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g299 ### # start gene g300 Scaffold_1 AUGUSTUS gene 1451717 1452028 0.73 - . g300 Scaffold_1 AUGUSTUS transcript 1451717 1452028 0.73 - . g300.t1 Scaffold_1 AUGUSTUS stop_codon 1451717 1451719 . - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_1 AUGUSTUS CDS 1451717 1452028 0.73 - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_1 AUGUSTUS start_codon 1452026 1452028 . - 0 transcript_id "g300.t1"; gene_id "g300"; # protein sequence = [MSTTADTEVNTTREEADSSVTHVDGQEHEVVNSETEKDVSSSEESVEELQDDSEGVEQDSDEEEEEEEEEEGEEEEPA # LKYERIGGATCTAEEGLSLRAGYIE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g300 ### # start gene g301 Scaffold_1 AUGUSTUS gene 1452298 1452999 0.58 - . g301 Scaffold_1 AUGUSTUS transcript 1452298 1452999 0.58 - . g301.t1 Scaffold_1 AUGUSTUS stop_codon 1452298 1452300 . - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_1 AUGUSTUS CDS 1452298 1452999 0.58 - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_1 AUGUSTUS start_codon 1452997 1452999 . - 0 transcript_id "g301.t1"; gene_id "g301"; # protein sequence = [MTTQAAASGLSASSSPFFSTPPPPLPSHSKALSESLPPPRSDYPTPPPSESPCESPTRIPTFNYYGNSLNKLLASHLD # DLPPNAPSVLYEPQARSIGKMKMKTHSLPATLANMMEVEVEEGITFGSLESGPSIEVQSEEGQGSNGITLVASAEEDIIMRDNVSESGSTVSVNVVNR # SKQGRESSRNALAEGVMDPDAKVESELCPEEVGVQNEEFTDDEDYVLNHYDLVYPSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g301 ### # start gene g302 Scaffold_1 AUGUSTUS gene 1460159 1462485 0.38 - . g302 Scaffold_1 AUGUSTUS transcript 1460159 1462485 0.38 - . g302.t1 Scaffold_1 AUGUSTUS stop_codon 1460159 1460161 . - 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_1 AUGUSTUS CDS 1460159 1460449 0.58 - 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_1 AUGUSTUS CDS 1460560 1462485 0.38 - 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_1 AUGUSTUS start_codon 1462483 1462485 . - 0 transcript_id "g302.t1"; gene_id "g302"; # protein sequence = [MSRPSSTMKFLQLSPRQQKNLNNTLTHSSLRHPFSDPRPNLQRSSTLRRHQTGGRWVSEDMSVASSHRTDGEADEDYE # DVPNPQGRRQTLRTGGSADSALTVGVGRSLVGEGLKAAGLKGGGAVGRRGDIFDENTPLREKVIRDRERAQRLERIERSISRTGIRSQSRLGWEHEND # EDEGHFSNIRSRGNGSDIRTRAGTVVGPRASTSMAIRDREREGVGGEPEPRTAPPHLRSYKSSYDLVLSQEALSRHEIDLGRETAQDREDRAPSSLNR # HVPSPFGSTRRSIPNLLSNDGEVSHLNIPRSNHNRLLHDSLHMFETHVTRLPSTSSATTSDLLRNAQNIAGAAEKLNLMTRVAMTKALDAQINAEVDG # GTSDEAADIWRTVGADYRDQMRVSDELVRSVTDFLLGVGRAVKDMTGGGDSHGRSVSLDEVGGRLTRNSLGSDGGSTGSGRRSEESRRSWGDDVKRLS # TGPKRSESALSGRPSSVLNARDHETPISLRSRQSNESTNVSRAQESGRGNLVTFDSQETLHAVAFDPSPTPASRAQLNRNQERPGATLDRARTLPPLS # IPKPLAQLPSESLTRRQTQTPASSTRHRPTTGSNTVRGPFPLSSPNIPTTALTPHTVSNSQRQDFPYFVLIQARQRQRKRTQSNSSASGAESAERVSR # VTRTESGSETERGPARTIGRQGDRSRMSLDGSRTLNGNVHPADRSAATSILPISKPRERRKTVVDMWPRAGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g302 ### # start gene g303 Scaffold_1 AUGUSTUS gene 1462741 1463373 0.95 - . g303 Scaffold_1 AUGUSTUS transcript 1462741 1463373 0.95 - . g303.t1 Scaffold_1 AUGUSTUS stop_codon 1462741 1462743 . - 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_1 AUGUSTUS CDS 1462741 1463373 0.95 - 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_1 AUGUSTUS start_codon 1463371 1463373 . - 0 transcript_id "g303.t1"; gene_id "g303"; # protein sequence = [MINASNLKAFHAAFTDDPPNDDDDDDNNYNGNGEDDTARLNRRHSLKSVSVNENTMAIQRALTLKERTRLTIDKLSSY # SRNTPSPSAHTRSSDSSSSTSRHRFLEQHHSGSETERELIDSDARPSTPKLHRTRLVSAPASPGKALLSIKQSNSTSSSSSESPARSRKRVSMAASDF # AEVTSEEGCVHPMNIKFLKHPDDFLMLHKLRLRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g303 ### # start gene g304 Scaffold_1 AUGUSTUS gene 1466233 1467132 0.98 + . g304 Scaffold_1 AUGUSTUS transcript 1466233 1467132 0.98 + . g304.t1 Scaffold_1 AUGUSTUS start_codon 1466233 1466235 . + 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_1 AUGUSTUS CDS 1466233 1467132 0.98 + 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_1 AUGUSTUS stop_codon 1467130 1467132 . + 0 transcript_id "g304.t1"; gene_id "g304"; # protein sequence = [MESEVQNFEESILFFADAFQIHGPGSRRASPVTLNSDSAVDSEAATPSLTPGSSATSSRASSFAFDSSRRPSFVGRLS # SALMMSTVPEADIVDQYDPDFEDPCMVEDHLSAVEDQWIEKSKIHQLEAWQIEAAAVDRSVRILPGVKKMIDSIPAGRYAVATSGAKTYGSYGSFVKR # RIFDSNYFLFVFIAYGCMTRVGIIPPPVTITADDKRLKAGKPAPDPFLLAASCLGYDPKKCVVFEDSPSGIRAGVASGATVIAVCTSHERSKIENCGA # HFVVENMEKVKCELVDEQLHFTILQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g304 ### # start gene g305 Scaffold_1 AUGUSTUS gene 1477416 1477799 0.81 + . g305 Scaffold_1 AUGUSTUS transcript 1477416 1477799 0.81 + . g305.t1 Scaffold_1 AUGUSTUS start_codon 1477416 1477418 . + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_1 AUGUSTUS CDS 1477416 1477799 0.81 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_1 AUGUSTUS stop_codon 1477797 1477799 . + 0 transcript_id "g305.t1"; gene_id "g305"; # protein sequence = [MSTPSVKLSLDNRWKPKLHSAQAHFHSASQEDFELDESAPFRAIRSESSGNRLDEDLSRIRLNSVEEVEERTEDLEKA # MDGKPETWGEPFKVEWLCTDRLPFFSNPSSSKSLESRSRGQGFERRNRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g305 ### # start gene g306 Scaffold_1 AUGUSTUS gene 1478543 1478860 0.87 - . g306 Scaffold_1 AUGUSTUS transcript 1478543 1478860 0.87 - . g306.t1 Scaffold_1 AUGUSTUS stop_codon 1478543 1478545 . - 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_1 AUGUSTUS CDS 1478543 1478860 0.87 - 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_1 AUGUSTUS start_codon 1478858 1478860 . - 0 transcript_id "g306.t1"; gene_id "g306"; # protein sequence = [MLITTDWLDPSDDHIMNTSAEALLKWAEDEAKRRGLFSPFIYMNYASGSEAVMVRSTDGQTLKKMIQVKKMYDPQGDL # DKLWHGGFKLPQTEEHGPVTNYDRSEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g306 ### # start gene g307 Scaffold_1 AUGUSTUS gene 1478892 1479452 0.38 - . g307 Scaffold_1 AUGUSTUS transcript 1478892 1479452 0.38 - . g307.t1 Scaffold_1 AUGUSTUS stop_codon 1478892 1478894 . - 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_1 AUGUSTUS CDS 1478892 1479452 0.38 - 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_1 AUGUSTUS start_codon 1479450 1479452 . - 0 transcript_id "g307.t1"; gene_id "g307"; # protein sequence = [MFTFSQGPVWGGSQFFAIKDAPNLLERLVTFTEKLAEDPKGFFGLSLAWNPEAKDYIIWTLQTYLKPEAYPALWSGFE # SLTPLVDMMGIKNLTDITEEFQEADPGKHGRSRWLTMTYKANAQFHLDLYARGVELFEPYHGHAGVHWAVSVQPVPARLASAGIENGGNPTCLKESEG # NLWGQYPQKT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g307 ### # start gene g308 Scaffold_1 AUGUSTUS gene 1481322 1481633 0.52 - . g308 Scaffold_1 AUGUSTUS transcript 1481322 1481633 0.52 - . g308.t1 Scaffold_1 AUGUSTUS stop_codon 1481322 1481324 . - 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_1 AUGUSTUS CDS 1481322 1481633 0.52 - 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_1 AUGUSTUS start_codon 1481631 1481633 . - 0 transcript_id "g308.t1"; gene_id "g308"; # protein sequence = [MVVTKPHNSAASLSKPFKAPSMNGRGSLAIAAPMKVISSSSSRSSEQCQPQNGPPSRGAKNGEARLELEKDSIFGAEL # GSDSSVTSSQDMAKNSDGELCHLIF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g308 ### # start gene g309 Scaffold_1 AUGUSTUS gene 1487134 1487583 0.64 - . g309 Scaffold_1 AUGUSTUS transcript 1487134 1487583 0.64 - . g309.t1 Scaffold_1 AUGUSTUS stop_codon 1487134 1487136 . - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_1 AUGUSTUS CDS 1487134 1487583 0.64 - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_1 AUGUSTUS start_codon 1487581 1487583 . - 0 transcript_id "g309.t1"; gene_id "g309"; # protein sequence = [MIQVTVVSSSAAHLDDIGMPQEHTWDVEKFVELHLIKRKVLSLMHSASGPLQAKLHEISSDLEDAAASHLPQANESVK # MARGDEVNTARKQHGPKKRLNQSDDEENGVAPRKKPKMREEDQDQDDDNSSVGSAIFVKRVAPKKRNHLPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g309 ### # start gene g310 Scaffold_1 AUGUSTUS gene 1488699 1490124 0.75 + . g310 Scaffold_1 AUGUSTUS transcript 1488699 1490124 0.75 + . g310.t1 Scaffold_1 AUGUSTUS start_codon 1488699 1488701 . + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_1 AUGUSTUS CDS 1488699 1489345 0.88 + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_1 AUGUSTUS CDS 1489422 1490124 0.85 + 1 transcript_id "g310.t1"; gene_id "g310"; Scaffold_1 AUGUSTUS stop_codon 1490122 1490124 . + 0 transcript_id "g310.t1"; gene_id "g310"; # protein sequence = [MPNQTIGNAGIPFLTMSSTKSKSDRKSALKNVAPALATNKRSQIKEAPSVVEKEEDEIDLETDESEGSEDDGGIDDEG # IERLMKALGDDGLDEFEQAQLEAALGDPEDESEEEDGEDANTEEENSDQDEEVEEVENDGTEGGEEDDQFIQLEDVEAIVDDAVPFQKVEINNEIALA # RIRESLQLDPSIPWTETLAVSYPHTIDVDVNDDLNRELAFASHAHQIATKSYPNFPWTRPSDYFAEMVKSDVHMERIRQRLLDEKAGIKKSEEKRKER # EGKKFGKQVQIEKLKDRERGKKEMEERLKGLKRSELAKISPTDVYSYFHSPERKDILDNPDGNDDAFDVAVEDAISDRPAKRGRGGPAGGSRLSRQGR # DKKFGFGGAGRRSKQNTSASTDDFDSRSRKGSGGGGRGGRGTRGGGRGGRGGGGGRGGGRGGSKRLGKSKRMDARSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g310 ### # start gene g311 Scaffold_1 AUGUSTUS gene 1491108 1491902 0.21 - . g311 Scaffold_1 AUGUSTUS transcript 1491108 1491902 0.21 - . g311.t1 Scaffold_1 AUGUSTUS stop_codon 1491108 1491110 . - 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_1 AUGUSTUS CDS 1491108 1491902 0.21 - 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_1 AUGUSTUS start_codon 1491900 1491902 . - 0 transcript_id "g311.t1"; gene_id "g311"; # protein sequence = [MFLGRMVFFRLHESPRYLVHAGRPQEALESLQMISKFNGSDLSLALEDVDDQKPQTPSSPRDCDNSEQHGEDSVPFLP # HKSLDGAGDDADSQHANSNEDLRKTGDTIFDAGITHYSSTGESSTPLGAHVFATPTVEYALPPSLTREISDLANAKFDANSEPDGPTPTVDQSSHVTV # DVDSVPRHRPLTHARRRSHRLSRRASSIYERKVCRMLPHWLRRPIWAWWDRVMLVLAPEWLSTTLLVWAAWWAMSLGVLVVDPYKTQQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g311 ### # start gene g312 Scaffold_1 AUGUSTUS gene 1494277 1496066 0.37 - . g312 Scaffold_1 AUGUSTUS transcript 1494277 1496066 0.37 - . g312.t1 Scaffold_1 AUGUSTUS stop_codon 1494277 1494279 . - 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_1 AUGUSTUS CDS 1494277 1495032 0.72 - 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_1 AUGUSTUS CDS 1495110 1495652 0.41 - 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_1 AUGUSTUS CDS 1496037 1496066 0.53 - 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_1 AUGUSTUS start_codon 1496064 1496066 . - 0 transcript_id "g312.t1"; gene_id "g312"; # protein sequence = [MLVPITTGSSSRPRRSSSHSRHSSRSISAHLILTNERLTQANARNIALETQKEELLVRFVALAKDKASVEADLRTTQE # SLQLYQAQLDLAQKEVNRATDVVRKVDQARVQAENEVARLRSRVRQLETEKSTRRGWEEGWDIGFQEGIERAQAETSLMDRFVPRRRRSSTRMRDGET # DDGGGEADDSTASSSLISTRNRKPFIPEDDSYVVSPVSSGAQPAQQSPLLSRTRQRARSIASRLRSRSPPSSEPHPSRPQSRSSRAQTYVSSTNQSQT # SSPEVIHPLPIPRPPSSLSHHSLVPPDNYIPTMTPTDHFIPMPPPHELSNPVPSATQAPSEPDTVREQFANQRELGRNSWRSRAASTGSRASTRISEY # DLVSPPTRERAEAPQPPPNFDVDRGSSPTGDTGSRRMVEEWRDIVTTPPPNRGEPDGESRPEPEVGHTSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g312 ### # start gene g313 Scaffold_1 AUGUSTUS gene 1496615 1497100 0.57 + . g313 Scaffold_1 AUGUSTUS transcript 1496615 1497100 0.57 + . g313.t1 Scaffold_1 AUGUSTUS start_codon 1496615 1496617 . + 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_1 AUGUSTUS CDS 1496615 1497100 0.57 + 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_1 AUGUSTUS stop_codon 1497098 1497100 . + 0 transcript_id "g313.t1"; gene_id "g313"; # protein sequence = [MATPIRKKRNFKALQLTTAPAPQIADTAAQPIPTRQAPPASGKKRPPPMTLKAPKLPPSTTSATIEDGNLLTVQSSST # SAPNTAVTPSAKRNTYHTTLSNTSILDSNAEVKYDLRNEDLKDLQELGQGNGGSVKKVEHTPTGHNNGEKGSYLQRDFKQIFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g313 ### # start gene g314 Scaffold_1 AUGUSTUS gene 1499607 1501357 0.22 - . g314 Scaffold_1 AUGUSTUS transcript 1499607 1501357 0.22 - . g314.t1 Scaffold_1 AUGUSTUS stop_codon 1499607 1499609 . - 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_1 AUGUSTUS CDS 1499607 1500468 1 - 1 transcript_id "g314.t1"; gene_id "g314"; Scaffold_1 AUGUSTUS CDS 1501080 1501357 0.22 - 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_1 AUGUSTUS start_codon 1501355 1501357 . - 0 transcript_id "g314.t1"; gene_id "g314"; # protein sequence = [MIDPSEVSVLSDFHFESAEGKSTSGFIGAQTPRSSFTSAIPASLATDPATLGAHEETLQIQTAHFTDTYGQFLLELGI # NDLPPLFNIVHIYSHREEFYSTEIDFVASPKGYNFQDAQAISPYLEHPKKGPTSQFCSELAGRLKCYVFAGYPERLTDEEAPLSKEESTSEAGNSQTV # GANSAVLYGPNGEWVGHYRKTNLFVTDKSWAKPGELDIHLWGGVHLLYDFSIGTGFATFLLPSPLRTLSFGICNDLNVSDSDIWTPEDGPYEIADYAL # SQNANILVLLNAWLDSGKEEFEDTDWDTLNYWAARLRPLWVNNLAGPNTSKIVEEDNENANGKEMIVVVCNRTGEENGNSLFLVLVDIFITVHRRKDI # RRLLRNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g314 ### # start gene g315 Scaffold_1 AUGUSTUS gene 1502901 1503605 0.65 - . g315 Scaffold_1 AUGUSTUS transcript 1502901 1503605 0.65 - . g315.t1 Scaffold_1 AUGUSTUS stop_codon 1502901 1502903 . - 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_1 AUGUSTUS CDS 1502901 1503605 0.65 - 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_1 AUGUSTUS start_codon 1503603 1503605 . - 0 transcript_id "g315.t1"; gene_id "g315"; # protein sequence = [MGDESSLTLGNPSSQLFGSSPSDTNMSGEDSSSDDDDVNEETFKKITLGHSNVRHFGKSSNMRFIHDIITNATKNNQP # LDFTQHDLYLARFKRPEYWGLDMVSNMLRAFIFDLIMAQWKFQPEIAAPIYTFPEIDLLWDLLRIYFTEVAPYFPLLHRPTFEKAVINGRHLLDHSFG # ALLLAVCAVAARDSQDPRILKQDTKITAGWQWFSQIRLVRPNFVEPTSIHELQLYCVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g315 ### # start gene g316 Scaffold_1 AUGUSTUS gene 1511692 1512150 0.51 + . g316 Scaffold_1 AUGUSTUS transcript 1511692 1512150 0.51 + . g316.t1 Scaffold_1 AUGUSTUS start_codon 1511692 1511694 . + 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_1 AUGUSTUS CDS 1511692 1511703 0.51 + 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_1 AUGUSTUS CDS 1511761 1512150 0.65 + 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_1 AUGUSTUS stop_codon 1512148 1512150 . + 0 transcript_id "g316.t1"; gene_id "g316"; # protein sequence = [MLETDIWIAVTPQVHETIVIDLSSEGEDEELEENPHQELESHNAQVKELETELIRAKKKASQKLPSLTEQLNYADSRL # ESFMQHGHRVDHTNDTHSQLVEFEEKKQLKQENERLHKEITGKPKIPMLSLSLFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g316 ### # start gene g317 Scaffold_1 AUGUSTUS gene 1512949 1514172 0.8 - . g317 Scaffold_1 AUGUSTUS transcript 1512949 1514172 0.8 - . g317.t1 Scaffold_1 AUGUSTUS stop_codon 1512949 1512951 . - 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_1 AUGUSTUS CDS 1512949 1514172 0.8 - 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_1 AUGUSTUS start_codon 1514170 1514172 . - 0 transcript_id "g317.t1"; gene_id "g317"; # protein sequence = [MDYKFGGKYLLEQEIANGGCGTVFLGTHHIAGKQVAIKLEPATEGRQSMRRSKSQPELQSKSKKQTIDPYPGLSPLTL # ESQIYKRLMGAPGVPFLLHSGKSGPYNVLVMDLLGPSLEDLSRRCGRRFSLKTTCMLAVQCLDRLEYVHSRGVLHRDVKPANFVMSRTTPSIVNIIDF # GLAKRYRQPLNGEHIPYSQHPDALHGVGTSLYASLNTHFGVETGRRDDLESLAYMLIGFVRGGLPWRKVRATVDPPPNWPSKEWNPITQTWNLIREEK # VKAEVALLSTSKDRRQHNHAPTSSSDPATLLAGLPEEFGVLYRYARTLQFTDLPDYEGLRQLFRGLAEREGFLDADGEYDGVWDWHGVDIPAPLASSS # ASAVHGQGRFCEACNKRAAEAAGVGSLGKRRKEWV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g317 ### # start gene g318 Scaffold_1 AUGUSTUS gene 1515854 1516300 0.52 + . g318 Scaffold_1 AUGUSTUS transcript 1515854 1516300 0.52 + . g318.t1 Scaffold_1 AUGUSTUS start_codon 1515854 1515856 . + 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_1 AUGUSTUS CDS 1515854 1516300 0.52 + 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_1 AUGUSTUS stop_codon 1516298 1516300 . + 0 transcript_id "g318.t1"; gene_id "g318"; # protein sequence = [MFQSLQKCLELRDKYMTKSRQRLGDNPRDYDGDFMGLNDECAGVSGVRPDANFAANQPPPWSPERWAIYPPPPPPHWH # WTDMQQVISSDGRRSPEGEFNFKECHIPEGDSKEFAIDDTGVYQVYDNAAKSLFILSPVCSWRQLTFSLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g318 ### # start gene g319 Scaffold_1 AUGUSTUS gene 1518212 1519333 0.22 + . g319 Scaffold_1 AUGUSTUS transcript 1518212 1519333 0.22 + . g319.t1 Scaffold_1 AUGUSTUS start_codon 1518212 1518214 . + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_1 AUGUSTUS CDS 1518212 1518306 0.29 + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_1 AUGUSTUS CDS 1519114 1519333 0.58 + 1 transcript_id "g319.t1"; gene_id "g319"; Scaffold_1 AUGUSTUS stop_codon 1519331 1519333 . + 0 transcript_id "g319.t1"; gene_id "g319"; # protein sequence = [MPQSSLAELARNSVIQSGFEMEIKRHWLGQQXTKPLPKIKPLTKWEQFAKAKGIQGKSKEKREKKVWDEERQEWINRW # GKDAKNKQVEEQWITEVPMNAGEFSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g319 ### # start gene g320 Scaffold_1 AUGUSTUS gene 1519665 1520021 0.49 + . g320 Scaffold_1 AUGUSTUS transcript 1519665 1520021 0.49 + . g320.t1 Scaffold_1 AUGUSTUS start_codon 1519665 1519667 . + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_1 AUGUSTUS CDS 1519665 1520021 0.49 + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_1 AUGUSTUS stop_codon 1520019 1520021 . + 0 transcript_id "g320.t1"; gene_id "g320"; # protein sequence = [MDIPVQFDPTEGSVSAESKAALDLLSKMNSDARKTRMTEAQRPSKKSRTSRKYMFTDVSGCIDTDHADGGNEVEDPEG # KVLNVRKAVRFASKGRGGAALGREREKAGKLGKSGKGKRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g320 ### # start gene g321 Scaffold_1 AUGUSTUS gene 1520666 1521502 0.71 + . g321 Scaffold_1 AUGUSTUS transcript 1520666 1521502 0.71 + . g321.t1 Scaffold_1 AUGUSTUS start_codon 1520666 1520668 . + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_1 AUGUSTUS CDS 1520666 1521502 0.71 + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_1 AUGUSTUS stop_codon 1521500 1521502 . + 0 transcript_id "g321.t1"; gene_id "g321"; # protein sequence = [MIHSSKVPEAALRGRMFESSVSRLAEWWSQDFFEVTDEGHIRNITFDTMKQKLIKFVPGFAEQFGDAVAPPEAERDNS # RSRLKYKGKGKEKEKQPPSTTPLIDSSDLDLLEDILDNSIETIKSPKSLMKHALMQSGSRDTSAQLFTALCRALAIPARLVVSLQSVPWKAAVGREAK # KYPKKTSHVSKGKVEVVVNEGNAAPAVSSPMKGGQGHRRDDQPVDKKGKAKAKEEAKPAVKLRKSKSKGNVLGSAQSTSASNKPKKPKHDGKTFFVRS # VHSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g321 ### # start gene g322 Scaffold_1 AUGUSTUS gene 1521974 1522537 0.46 + . g322 Scaffold_1 AUGUSTUS transcript 1521974 1522537 0.46 + . g322.t1 Scaffold_1 AUGUSTUS start_codon 1521974 1521976 . + 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_1 AUGUSTUS CDS 1521974 1522537 0.46 + 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_1 AUGUSTUS stop_codon 1522535 1522537 . + 0 transcript_id "g322.t1"; gene_id "g322"; # protein sequence = [MPTSIIGFKDHPLYVLPRHLKQNETIYPPPAPALGAGFDSSMPLDPSGSRSHTPELGKFRGEPVYPRSSVVPLKTPEN # WLRSEGRSMKEGAAPMKYVKLRASTIGRRREIEMIKEGMKDIQEKTKGANGVIGIHVDELVDEERAGTSGNADTGGEIMQGLYARNQTELYVPDPVVD # VSKASDISSYY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g322 ### # start gene g323 Scaffold_1 AUGUSTUS gene 1534406 1534990 0.97 - . g323 Scaffold_1 AUGUSTUS transcript 1534406 1534990 0.97 - . g323.t1 Scaffold_1 AUGUSTUS stop_codon 1534406 1534408 . - 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_1 AUGUSTUS CDS 1534406 1534990 0.97 - 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_1 AUGUSTUS start_codon 1534988 1534990 . - 0 transcript_id "g323.t1"; gene_id "g323"; # protein sequence = [MAQAEVQSQSQGHGYPHTAHLYSTRYSTHHVFQPAYALSQQPQHLQPVMPHTQSQENAHVQTTFASLLNSLTREQSEA # STIVSGVSSAPPTTSSTSSTPFVVSVPTTPASDKGPTSAQSYENNEDSSNEGIDENHKEGGEDNAGCAEEMQIDPKLVERVVNPALAGSQQNQYYESD # QQQQAQVKLDQRGNPETS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g323 ### # start gene g324 Scaffold_1 AUGUSTUS gene 1546356 1548075 0.34 + . g324 Scaffold_1 AUGUSTUS transcript 1546356 1548075 0.34 + . g324.t1 Scaffold_1 AUGUSTUS start_codon 1546356 1546358 . + 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_1 AUGUSTUS CDS 1546356 1546371 0.43 + 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_1 AUGUSTUS CDS 1547375 1548075 0.68 + 2 transcript_id "g324.t1"; gene_id "g324"; Scaffold_1 AUGUSTUS stop_codon 1548073 1548075 . + 0 transcript_id "g324.t1"; gene_id "g324"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQASLIR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g324 ### # start gene g325 Scaffold_1 AUGUSTUS gene 1548117 1548671 0.72 + . g325 Scaffold_1 AUGUSTUS transcript 1548117 1548671 0.72 + . g325.t1 Scaffold_1 AUGUSTUS start_codon 1548117 1548119 . + 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_1 AUGUSTUS CDS 1548117 1548671 0.72 + 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_1 AUGUSTUS stop_codon 1548669 1548671 . + 0 transcript_id "g325.t1"; gene_id "g325"; # protein sequence = [MFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNMRVRLFLAPMTPEVRRGVLET # VVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIK # LESLIQGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g325 ### # start gene g326 Scaffold_1 AUGUSTUS gene 1549011 1549331 0.4 + . g326 Scaffold_1 AUGUSTUS transcript 1549011 1549331 0.4 + . g326.t1 Scaffold_1 AUGUSTUS start_codon 1549011 1549013 . + 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_1 AUGUSTUS CDS 1549011 1549331 0.4 + 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_1 AUGUSTUS stop_codon 1549329 1549331 . + 0 transcript_id "g326.t1"; gene_id "g326"; # protein sequence = [MPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEE # LSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g326 ### # start gene g327 Scaffold_1 AUGUSTUS gene 1550081 1550524 0.65 + . g327 Scaffold_1 AUGUSTUS transcript 1550081 1550524 0.65 + . g327.t1 Scaffold_1 AUGUSTUS start_codon 1550081 1550083 . + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_1 AUGUSTUS CDS 1550081 1550524 0.65 + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_1 AUGUSTUS stop_codon 1550522 1550524 . + 0 transcript_id "g327.t1"; gene_id "g327"; # protein sequence = [MFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDE # EIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVYGVLTTTRTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g327 ### # start gene g328 Scaffold_1 AUGUSTUS gene 1551271 1551693 0.84 + . g328 Scaffold_1 AUGUSTUS transcript 1551271 1551693 0.84 + . g328.t1 Scaffold_1 AUGUSTUS start_codon 1551271 1551273 . + 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_1 AUGUSTUS CDS 1551271 1551693 0.84 + 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_1 AUGUSTUS stop_codon 1551691 1551693 . + 0 transcript_id "g328.t1"; gene_id "g328"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g328 ### # start gene g329 Scaffold_1 AUGUSTUS gene 1555699 1556764 0.2 + . g329 Scaffold_1 AUGUSTUS transcript 1555699 1556764 0.2 + . g329.t1 Scaffold_1 AUGUSTUS start_codon 1555699 1555701 . + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_1 AUGUSTUS CDS 1555699 1555755 0.22 + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_1 AUGUSTUS CDS 1555823 1556764 0.9 + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_1 AUGUSTUS stop_codon 1556762 1556764 . + 0 transcript_id "g329.t1"; gene_id "g329"; # protein sequence = [MDFIEQLPMSNGYTAILVVLSFFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERV # NQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRK # RISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPIVLNLLHLQLKLMVKRSTTLP # KSSTPSWTEGINVVLYVTIWWAGYEGTDDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g329 ### # start gene g330 Scaffold_1 AUGUSTUS gene 1561880 1562593 0.32 + . g330 Scaffold_1 AUGUSTUS transcript 1561880 1562593 0.32 + . g330.t1 Scaffold_1 AUGUSTUS start_codon 1561880 1561882 . + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_1 AUGUSTUS CDS 1561880 1562090 0.43 + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_1 AUGUSTUS CDS 1562154 1562593 0.68 + 2 transcript_id "g330.t1"; gene_id "g330"; Scaffold_1 AUGUSTUS stop_codon 1562591 1562593 . + 0 transcript_id "g330.t1"; gene_id "g330"; # protein sequence = [MMRSVPSKDLDVFASLRGKVSPVVASKISTLSPPLEIKSSTSVPKAPVAPPRLIRRNRELESLKADASTFFSSPRSTR # SRDSDNELLSGFPSAVSASRASSSTKVSTDRKEPKPKTTVKVVEDSKASKPTSSAMVYKRVRLPSRSRKIAPTTAKGKSRQVVVSDDDSASNEVESED # EEEDEDEEEDSAPPPKRLKTTSSLPGKTLFFFLFDFINSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g330 ### # start gene g331 Scaffold_1 AUGUSTUS gene 1566623 1567738 0.28 - . g331 Scaffold_1 AUGUSTUS transcript 1566623 1567738 0.28 - . g331.t1 Scaffold_1 AUGUSTUS stop_codon 1566623 1566625 . - 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_1 AUGUSTUS CDS 1566623 1567738 0.28 - 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_1 AUGUSTUS start_codon 1567736 1567738 . - 0 transcript_id "g331.t1"; gene_id "g331"; # protein sequence = [MKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDI # VESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIR # RTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMSPENDYIFDAIPHLRLSDTDSDENSVRERINN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g331 ### # start gene g332 Scaffold_1 AUGUSTUS gene 1568019 1569461 0.32 - . g332 Scaffold_1 AUGUSTUS transcript 1568019 1569461 0.32 - . g332.t1 Scaffold_1 AUGUSTUS stop_codon 1568019 1568021 . - 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_1 AUGUSTUS CDS 1568019 1569461 0.32 - 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_1 AUGUSTUS start_codon 1569459 1569461 . - 0 transcript_id "g332.t1"; gene_id "g332"; # protein sequence = [MTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRF # VWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPPCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSN # VPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHV # YGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEP # YQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGK # YLSNPSDESW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g332 ### # start gene g333 Scaffold_1 AUGUSTUS gene 1570482 1570886 0.97 - . g333 Scaffold_1 AUGUSTUS transcript 1570482 1570886 0.97 - . g333.t1 Scaffold_1 AUGUSTUS stop_codon 1570482 1570484 . - 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_1 AUGUSTUS CDS 1570482 1570886 0.97 - 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_1 AUGUSTUS start_codon 1570884 1570886 . - 0 transcript_id "g333.t1"; gene_id "g333"; # protein sequence = [MDTNDVNKKRSLRKLSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNEQFNLNPI # KSFFLQNGRIKPKPAKESSEERRFVEPILQNLVWGRIAINLNPQKPHRINVITKYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g333 ### # start gene g334 Scaffold_1 AUGUSTUS gene 1571307 1572388 0.53 - . g334 Scaffold_1 AUGUSTUS transcript 1571307 1572388 0.53 - . g334.t1 Scaffold_1 AUGUSTUS stop_codon 1571307 1571309 . - 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_1 AUGUSTUS CDS 1571307 1571758 0.8 - 2 transcript_id "g334.t1"; gene_id "g334"; Scaffold_1 AUGUSTUS CDS 1571878 1572388 0.55 - 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_1 AUGUSTUS start_codon 1572386 1572388 . - 0 transcript_id "g334.t1"; gene_id "g334"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLNGETEI # LDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEI # NNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g334 ### # start gene g335 Scaffold_1 AUGUSTUS gene 1572418 1572687 0.65 - . g335 Scaffold_1 AUGUSTUS transcript 1572418 1572687 0.65 - . g335.t1 Scaffold_1 AUGUSTUS stop_codon 1572418 1572420 . - 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_1 AUGUSTUS CDS 1572418 1572687 0.65 - 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_1 AUGUSTUS start_codon 1572685 1572687 . - 0 transcript_id "g335.t1"; gene_id "g335"; # protein sequence = [MPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVR # VFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g335 ### # start gene g336 Scaffold_1 AUGUSTUS gene 1573074 1573937 0.86 - . g336 Scaffold_1 AUGUSTUS transcript 1573074 1573937 0.86 - . g336.t1 Scaffold_1 AUGUSTUS stop_codon 1573074 1573076 . - 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_1 AUGUSTUS CDS 1573074 1573937 0.86 - 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_1 AUGUSTUS start_codon 1573935 1573937 . - 0 transcript_id "g336.t1"; gene_id "g336"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKD # LLGIKLESLIQGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g336 ### # start gene g337 Scaffold_1 AUGUSTUS gene 1578787 1579394 0.21 + . g337 Scaffold_1 AUGUSTUS transcript 1578787 1579394 0.21 + . g337.t1 Scaffold_1 AUGUSTUS start_codon 1578787 1578789 . + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_1 AUGUSTUS CDS 1578787 1578979 0.21 + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_1 AUGUSTUS CDS 1579090 1579394 0.53 + 2 transcript_id "g337.t1"; gene_id "g337"; Scaffold_1 AUGUSTUS stop_codon 1579392 1579394 . + 0 transcript_id "g337.t1"; gene_id "g337"; # protein sequence = [MLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDAQEADDIELDVQEA # LDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLGEMQKMNGLNLLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g337 ### # start gene g338 Scaffold_1 AUGUSTUS gene 1580414 1580728 0.55 + . g338 Scaffold_1 AUGUSTUS transcript 1580414 1580728 0.55 + . g338.t1 Scaffold_1 AUGUSTUS start_codon 1580414 1580416 . + 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_1 AUGUSTUS CDS 1580414 1580728 0.55 + 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_1 AUGUSTUS stop_codon 1580726 1580728 . + 0 transcript_id "g338.t1"; gene_id "g338"; # protein sequence = [MYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWM # APENDYIFDAIPHLRLSDTDSDEELS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g338 ### # start gene g339 Scaffold_1 AUGUSTUS gene 1581003 1581678 0.33 - . g339 Scaffold_1 AUGUSTUS transcript 1581003 1581678 0.33 - . g339.t1 Scaffold_1 AUGUSTUS stop_codon 1581003 1581005 . - 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_1 AUGUSTUS CDS 1581003 1581218 0.62 - 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_1 AUGUSTUS CDS 1581277 1581428 0.99 - 2 transcript_id "g339.t1"; gene_id "g339"; Scaffold_1 AUGUSTUS CDS 1581510 1581678 0.55 - 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_1 AUGUSTUS start_codon 1581676 1581678 . - 0 transcript_id "g339.t1"; gene_id "g339"; # protein sequence = [MFCNHDSFYVVESSQHSYPTTGSNKGSNKEEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTP # PAPLESQSTKFIAATLNFQAAEFEFNANLHLEKSPDSGSDSSASDASFATAQSIPTTGSEDTVVTPTEMAVPVPKTVERATTPFTRGVTPMMEDKGHV # SA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g339 ### # start gene g340 Scaffold_1 AUGUSTUS gene 1583455 1585418 0.09 - . g340 Scaffold_1 AUGUSTUS transcript 1583455 1585418 0.09 - . g340.t1 Scaffold_1 AUGUSTUS stop_codon 1583455 1583457 . - 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_1 AUGUSTUS CDS 1583455 1584008 0.84 - 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_1 AUGUSTUS CDS 1584587 1584715 0.17 - 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_1 AUGUSTUS CDS 1584772 1585152 0.46 - 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_1 AUGUSTUS CDS 1585211 1585418 0.45 - 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_1 AUGUSTUS start_codon 1585416 1585418 . - 0 transcript_id "g340.t1"; gene_id "g340"; # protein sequence = [MRLAPSKDLDVFASLRGKVSPAVTSKINTPSPPLGIKPSTPAPKAPVAPPRLIRRNRELENLKTDASSFLASPRSARS # KDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRSRKVAPAASKGKARQIVVTDEDSASNEVESEDE # DEEEDSAPPPKRLKTTSSISASLPRRPVKRVTVPKRASKAATKSAPERFPDSTFQPVLLADAQDLSISLRRAIDLNDQLKQLESLFDSTRDLFLRSIL # DLQNAGEDPIVVLEALKAAEPNRRAITLNEWTLMATLFRWPSPFNLSGLDFDHRTPGEWIELLRSIHSGESTAHIDEQGHLVESSPPPDSATEAFEGL # NEVERGSADEGASSQVGGSVPMELDLPTIESLAEQTLSPEKGAEPAQTLES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g340 ### # start gene g341 Scaffold_1 AUGUSTUS gene 1595072 1595701 0.95 + . g341 Scaffold_1 AUGUSTUS transcript 1595072 1595701 0.95 + . g341.t1 Scaffold_1 AUGUSTUS start_codon 1595072 1595074 . + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_1 AUGUSTUS CDS 1595072 1595701 0.95 + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_1 AUGUSTUS stop_codon 1595699 1595701 . + 0 transcript_id "g341.t1"; gene_id "g341"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g341 ### # start gene g342 Scaffold_1 AUGUSTUS gene 1597283 1598438 0.21 + . g342 Scaffold_1 AUGUSTUS transcript 1597283 1598438 0.21 + . g342.t1 Scaffold_1 AUGUSTUS start_codon 1597283 1597285 . + 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_1 AUGUSTUS CDS 1597283 1597429 0.21 + 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_1 AUGUSTUS CDS 1597533 1598438 0.97 + 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_1 AUGUSTUS stop_codon 1598436 1598438 . + 0 transcript_id "g342.t1"; gene_id "g342"; # protein sequence = [MIQQQARVIETLQEQLREVKKGFTAGEVPTGGPLSKTGNTAGLSGRAPRELGGNPQVEQAGQIPDTPSVDRRRIHEWG # ARVQRAELGEYGRPEGGAYALENEGGGKGGFNPPPRVPPPHFSSQSRDRERPPSQGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSNSEGSNEGEQ # NQSSRNGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTWVLSLE # RMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEADEARRRLPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g342 ### # start gene g343 Scaffold_1 AUGUSTUS gene 1602838 1603797 0.65 + . g343 Scaffold_1 AUGUSTUS transcript 1602838 1603797 0.65 + . g343.t1 Scaffold_1 AUGUSTUS start_codon 1602838 1602840 . + 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_1 AUGUSTUS CDS 1602838 1603797 0.65 + 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_1 AUGUSTUS stop_codon 1603795 1603797 . + 0 transcript_id "g343.t1"; gene_id "g343"; # protein sequence = [MPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQTERVNQSVEAYLRIYCSYDQDDWDLLLPMAEFVYNN # TPNTTTGVSPFFANKGYHPKLSITLEQVQEAEVNEYASNLKELHAYLQERIEVANKVYAKYANQKRQEAPDWKEGDQVWLNMENVRTRRPMKKLDHKW # TGPYTVLSKVGSHAYRLDLPGDLHKIHNVFHVDRLKPHFHDKFKRQTSPPPPIFIKGKTEHFVEDILDSKPKKGRPEEVEYLVKWEGYNDEFNSWVGW # EGMVGSIELLRSWHKHHPRKRQPSRLQWASLEREAREDEEEGSGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g343 ### # start gene g344 Scaffold_1 AUGUSTUS gene 1604037 1606644 0.6 - . g344 Scaffold_1 AUGUSTUS transcript 1604037 1606644 0.6 - . g344.t1 Scaffold_1 AUGUSTUS stop_codon 1604037 1604039 . - 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_1 AUGUSTUS CDS 1604037 1605168 0.72 - 1 transcript_id "g344.t1"; gene_id "g344"; Scaffold_1 AUGUSTUS CDS 1605332 1606644 0.61 - 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_1 AUGUSTUS start_codon 1606642 1606644 . - 0 transcript_id "g344.t1"; gene_id "g344"; # protein sequence = [MSAPLRRSSSRTRSPQLPILTTIGEVPSPDLESDGEAEQDQLAFTIEFPSRPQLQLFETVFNTGKPLSGYCQDDPLWP # LLAEVASPCSNCSKSPAKCKVLPNSPRCTNCSVKKTCSLGKILRYRYFARRCNQDLAYSRRFLELHGTPAHQSTWGIPMVTWRQYDAALHERTSSTST # LLELNMLDDQDAADVDQQELRDFLALQQEEAAVAAKRKRDLSPLPVAGPSSKKVRSNASKKRPRRRSPVQETAEESPRRVRLVVPPVRSLPVTTSTPL # PPRAFPSSMEVPDADLSVQGHSNLVRLAAVAGAQSGLVQQPAVSSSIKGTGQDLLSSNMPPVPRPTLVPRALATHPYRAENQRLAARVRLLESQLSDS # QRENSSLTSALRDTSHALESRQREVEQLRSSSREVREQQVEYRRVLDQFRALDEALPGPPDRVRILLLYQQGVVDESNALATRQRRLVEELQEEVHRA # RGRAAFVEQMIKEYPDEGYYEVVLPPLSQLEGDLHKAREDLRRVATFAHRLYRSEPATVLHHHYRYLGAIIEAVVAFLRRGLDSDDLDTVVHNFQLGL # DYMQAARGVHGDMYMRSLSSIQWFFNNAVDEDEGLYRMVLEHSRFDNDGPFLTAAQHAGFAPPPDSSLEPPLHRRMFALSTALPHSDGAGRWDDIVPA # LPSIDQLTADWEQLMLQYIHHITDTPLPVPDPPVPMSSMGPVPESSGEANVEQSLEAPIVQVSSPSAGSHPPVPLFLSEQESPTSPSPPPCSPVPPLL # FGSVASLSIDLTGDDDELYETEESYAGRIAVAREGTELAVGQGIVKEESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g344 ### # start gene g345 Scaffold_1 AUGUSTUS gene 1611317 1611736 0.48 - . g345 Scaffold_1 AUGUSTUS transcript 1611317 1611736 0.48 - . g345.t1 Scaffold_1 AUGUSTUS stop_codon 1611317 1611319 . - 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_1 AUGUSTUS CDS 1611317 1611736 0.48 - 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_1 AUGUSTUS start_codon 1611734 1611736 . - 0 transcript_id "g345.t1"; gene_id "g345"; # protein sequence = [MQTYMTSCGSQSCSSFDSSAASWFKIQEQGRLTPGGDWAMSLMNTGAPANVTIPSNIAPGNYIIRHELIALQIAQTEG # GAEFYPACVQLKVGGTGTGTPSEDELVQLPGAYSDTDPGILVDVRFSVFIYVLHWTDLFVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g345 ### # start gene g346 Scaffold_1 AUGUSTUS gene 1612769 1613176 0.58 - . g346 Scaffold_1 AUGUSTUS transcript 1612769 1613176 0.58 - . g346.t1 Scaffold_1 AUGUSTUS stop_codon 1612769 1612771 . - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_1 AUGUSTUS CDS 1612769 1613176 0.58 - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_1 AUGUSTUS start_codon 1613174 1613176 . - 0 transcript_id "g346.t1"; gene_id "g346"; # protein sequence = [MVRADSYNSSQASTQDKNTVGGEWFSSSEISPNHSDVPNSQLWSGSEAGFIILRQHGRKRVRYYKYGAVLGRHAYLKE # NNKAVKYKKLDDEEYADVQAAGEHEPMTLRMVNEETGGNVPKIFQERLRSGWWKHWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g346 ### # start gene g347 Scaffold_1 AUGUSTUS gene 1621758 1622624 0.66 - . g347 Scaffold_1 AUGUSTUS transcript 1621758 1622624 0.66 - . g347.t1 Scaffold_1 AUGUSTUS stop_codon 1621758 1621760 . - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_1 AUGUSTUS CDS 1621758 1622624 0.66 - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_1 AUGUSTUS start_codon 1622622 1622624 . - 0 transcript_id "g347.t1"; gene_id "g347"; # protein sequence = [MATLVVSAIRRELGISLSMTDFYREPSVDGVAKLIATDKKGPGSQNAVSIDNGSTGIAGSTIVTNKQGPGPTIFMFPE # VTGFASVYATAFENIRHKLVVFGDEHWGKSFREGDSIQVLARNLLDQVREFQPNGPYYLAGWSFGGYLAFEIARQMQEVGEDVAILMMFDSYVYHEPL # RSVEWSDDLQHLLQVHEDKSAWIQQFNRIRTLISRYEAPMEAYMGKSVLVKALKIDKGDEADYPHPEDPYNGWREYIPRIERRSIEASHRMMFDGRNG # PKMGAIISEIMMSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g347 ### # start gene g348 Scaffold_1 AUGUSTUS gene 1623001 1624632 0.79 - . g348 Scaffold_1 AUGUSTUS transcript 1623001 1624632 0.79 - . g348.t1 Scaffold_1 AUGUSTUS stop_codon 1623001 1623003 . - 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_1 AUGUSTUS CDS 1623001 1624632 0.79 - 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_1 AUGUSTUS start_codon 1624630 1624632 . - 0 transcript_id "g348.t1"; gene_id "g348"; # protein sequence = [MANIGAYVVDEALQPVPRGVCGELLLTGSGLARGYLNRPELTTQKFIHLETSHPFGPNRAYRTGDIVRWTAEDKLVFL # HRKEDGQVKIRGQRLELGEIEQVLKQHPNVMSAAAALVKVHNSDHVVAYAVLKSKNDEGADGRILDLWDDHFNNEDSTYHSLHAENGGQRVVQWYSMF # DAQPIPSYDMVQWLDDTIDQIAPAHDDQVLEVGVGSGMIALQIAPRVQSFVGTDLSTPSLKTLAAQLSSNGLSSKVSLFATPAHDLGAVAEKYSFSLI # ILNSVLQYFPSGEYLAQVLAKMVELIDSSGRIFVGDVRSYSLIPLHDLERALANLEGDVTATEIQSNLSHYTEGQTELLVDPAFFFDIERRLPKVVHV # EIKPKLMSVQNELSRYRYNVVLHVNKQPRLSRASTWFDCASPEWTTEDLRMQLHSSRDDTVGALAIPVASIRRIREVLDSCGNLISKRSVNEIRQEIA # EDPSAKCSTTADIDRIAKRKVGMSYSTIPYNTALQLPSERFSSVRAHPKMRLLSETSQTLPSTVHHTTLHRTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g348 ### # start gene g349 Scaffold_1 AUGUSTUS gene 1654391 1655266 0.85 + . g349 Scaffold_1 AUGUSTUS transcript 1654391 1655266 0.85 + . g349.t1 Scaffold_1 AUGUSTUS start_codon 1654391 1654393 . + 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_1 AUGUSTUS CDS 1654391 1655266 0.85 + 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_1 AUGUSTUS stop_codon 1655264 1655266 . + 0 transcript_id "g349.t1"; gene_id "g349"; # protein sequence = [MSPPLNHNAPLPSPRLPGQSNTIPALHSYLSSQNIPSAGQSHHMYGPSSSHHSSHGGSSWDHPRLDTSGKLGNDRLDS # SHGRSSSAGSNSMWPGTERSSSRGYAGQSGSPSGSGPNSSTGGGGADSNFNFPTLNSPFFPTPSQMFNSNSGSSASSAGGNSSSTGGGSGGSVFGAGS # NQLPPPGSLNTSNSRNGYDHRSYAPSPPPLGGASFAQSASRHGLGSSNGLSSGGLNGIGGIGSLGGLGSGGNSGLQRSLPPVQSIPGYSQAGLSGSGG # GGGDMGDIWSRGTVNGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g349 ### # start gene g350 Scaffold_1 AUGUSTUS gene 1672753 1673247 0.89 + . g350 Scaffold_1 AUGUSTUS transcript 1672753 1673247 0.89 + . g350.t1 Scaffold_1 AUGUSTUS start_codon 1672753 1672755 . + 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_1 AUGUSTUS CDS 1672753 1673247 0.89 + 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_1 AUGUSTUS stop_codon 1673245 1673247 . + 0 transcript_id "g350.t1"; gene_id "g350"; # protein sequence = [MGSSSSGPSSPTIGPFTPTHPIHPHNAFDLSNIPNSACVPELDMQLQIPNVDFSGNYWPMQSVWQDESNMGMMHNDFD # LSSIPSIQMGGPKYVDETNTYVASPEAMGLGEYSQEYQQDYSNQYMSEYQQDYVQFGHSQFLEGHQSTESSLLGYDNMMGSPEQSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g350 ### # start gene g351 Scaffold_1 AUGUSTUS gene 1690723 1691517 0.47 - . g351 Scaffold_1 AUGUSTUS transcript 1690723 1691517 0.47 - . g351.t1 Scaffold_1 AUGUSTUS stop_codon 1690723 1690725 . - 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_1 AUGUSTUS CDS 1690723 1691517 0.47 - 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_1 AUGUSTUS start_codon 1691515 1691517 . - 0 transcript_id "g351.t1"; gene_id "g351"; # protein sequence = [MGGASKRNFAMFEKLCGQDAFSNVAIVTTRWDQEEEAVAKARLEELKTKPQLYKPILDGGGAIFRHERTRESANAILS # HLVAKTATSLLIQREMVEESKGISETAAGKELQQEILRQVEKHQQEMDELLEELKNNRETSEFEELEAECKALQEQATHWQEEARKLAETSTPIKPDL # LNESSPQPLFDTTVTHSVLPSARDDDGFFGASINGKAPNLCDSDRRGARAKLEVAVKYLLDAITTVLHTADSLRREVTASTGSRNYSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g351 ### # start gene g352 Scaffold_1 AUGUSTUS gene 1693173 1693856 0.52 + . g352 Scaffold_1 AUGUSTUS transcript 1693173 1693856 0.52 + . g352.t1 Scaffold_1 AUGUSTUS start_codon 1693173 1693175 . + 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_1 AUGUSTUS CDS 1693173 1693856 0.52 + 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_1 AUGUSTUS stop_codon 1693854 1693856 . + 0 transcript_id "g352.t1"; gene_id "g352"; # protein sequence = [MFQNLCGPNAYGNIVVLTTFWDRVSAEEGLMREEQLKSTFFSNIVAGGARFMRHDRTAQSAREVIAHILTLSPTDVRI # QEEIRVDGKGLEETAAGLVHREEVERVLEKHRQEIASLGKEISSIKQDNETLRRELEEEKEELQQRLARWESEKADLKKGLDDSLKSRERLEDQYKSV # DKVRSATLEVLQVKLKEEKTSNMVVEQMSEEVTVQKVYKSNQGGRSMYFCA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g352 ### # start gene g353 Scaffold_1 AUGUSTUS gene 1694156 1695610 0.97 + . g353 Scaffold_1 AUGUSTUS transcript 1694156 1695610 0.97 + . g353.t1 Scaffold_1 AUGUSTUS start_codon 1694156 1694158 . + 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_1 AUGUSTUS CDS 1694156 1695610 0.97 + 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_1 AUGUSTUS stop_codon 1695608 1695610 . + 0 transcript_id "g353.t1"; gene_id "g353"; # protein sequence = [MYFSKNIGLRRDWYTDAAFGQQQFTGTNPTTITLAPRRWIDEFTSTAQAQGRADIISLLTEKAESLYMQDYSDFRSSI # GISPGEKIVSDGRHGCSSVALFHLEPEGKLHPLGIVLDYKGSIEESVTIFNRRITSNVNGDEYMDWPWRYAKMCVQVSDWLRHEVAIHLVNTHLVEEV # IIVAAYRSFGPNHIIFRLLEPHWSTTLSLNKAARETLVPSIIIGMTGLTASQTYAFLKAAYDRFDWKGLYVPNDLRTRGFPVKCLDEPKYHNYAYARN # ISKTWNIIRKFVATVLSKEYAGGDAAVQRDASIGIFCDEVRSRKGGQLTSFPAIETLDELIDFVTMCIHVAAPQHTAVNYLQQYYQTFVPNKPSALHF # PIPQFLSELCSFTEEDLLSALPLKRPRDWLLMAQVPYLLSFEVPEESTILHYAETTSSSRATPTVIRSAAQVLASDLRAFIDTVIQNSNELDDQQTPY # LVLDPSRTAISILI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g353 ### # start gene g354 Scaffold_1 AUGUSTUS gene 1696849 1697712 0.98 + . g354 Scaffold_1 AUGUSTUS transcript 1696849 1697712 0.98 + . g354.t1 Scaffold_1 AUGUSTUS start_codon 1696849 1696851 . + 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_1 AUGUSTUS CDS 1696849 1697712 0.98 + 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_1 AUGUSTUS stop_codon 1697710 1697712 . + 0 transcript_id "g354.t1"; gene_id "g354"; # protein sequence = [MSDPRFGGQSRRSLRIFRELCGAATFKNVVVLTTFWDRVNEEEGLAREEELKSNSNFFKDLVEGGARFMRHDRENSGA # REVLDHIFTLVPMNVQIQEEIRVEGKTLEETAAGSVHREEIDRMVAKHKKEMEDINSEIATVKKGNDALRKELEEERAELQKKITRWEDEKMDLKKGL # DNESELRKRLEDEIRTQREKFEKAQQELQAELEKSKKGRDSVAVMEAQRKAREAERAKQEAENTLQRRMSFKHMGHEIARGIPLVPTSLAKPLFGTIG # RGLDIVDRRRRGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g354 ### # start gene g355 Scaffold_1 AUGUSTUS gene 1704795 1705906 0.5 + . g355 Scaffold_1 AUGUSTUS transcript 1704795 1705906 0.5 + . g355.t1 Scaffold_1 AUGUSTUS start_codon 1704795 1704797 . + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_1 AUGUSTUS CDS 1704795 1704862 0.5 + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_1 AUGUSTUS CDS 1704949 1705906 0.66 + 1 transcript_id "g355.t1"; gene_id "g355"; Scaffold_1 AUGUSTUS stop_codon 1705904 1705906 . + 0 transcript_id "g355.t1"; gene_id "g355"; # protein sequence = [MAADFAVDSVQFERQKSQSKYPTLFPADENPQYSTHSGDIQAVVTDGDEVRRLTNKRRAQGDALLSFIDGSLEGYGGR # GGTKFHSHVLKSKTTSQYVLLSPLIELSLVKNFSSKTPKFSLKPAIFSPASSNVPIAGNQNHDDDCSESSQSSDSENEYHSSSKLRRSSSASLMYEDR # AEPLSAVRPQTFMDAHLARLDLDAPSTQISPFESSDSNSSDSRPSSLGVPQLLLEAHTYPSHRTSSNNWTSGPSHDGYDLSRSSAIVRLPVSFGRDLS # RRSGQASHLELLAPGTSILNPRQPSPYTSGSLPDTAPAAHTSNMSLSFASAGRPTSEIPCLPEYKLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g355 ### # start gene g356 Scaffold_1 AUGUSTUS gene 1705972 1707515 0.43 + . g356 Scaffold_1 AUGUSTUS transcript 1705972 1707515 0.43 + . g356.t1 Scaffold_1 AUGUSTUS start_codon 1705972 1705974 . + 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_1 AUGUSTUS CDS 1705972 1706621 0.43 + 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_1 AUGUSTUS CDS 1706777 1707515 0.98 + 1 transcript_id "g356.t1"; gene_id "g356"; Scaffold_1 AUGUSTUS stop_codon 1707513 1707515 . + 0 transcript_id "g356.t1"; gene_id "g356"; # protein sequence = [MPAIDPHTSSPPPQWEPPTTLSSSMVNALTNMAPPGDDPVHKRHGMASPRSPTEDLSLTSPVTAPAYSSSCSSLPPPP # WANGPPQPPPSPSHSPGTAKKRKRTTVETHQNQRVARTRSPTAARTVLESVVADGTSGMDNLTTSSRPVIMYRLRTADMENGMINVVLKEDYMANFLQ # NKAYLVEEKVKKKEKDRERRMGKKVEEIKETSLDPDRVEELLANARKAELKQEKHRQKIRELEEKVKAAEEYKRQLERQRASVRPTKVQRRTGKVEER # EKAKKEKIMKEQRTHEAEKTERLQREQEMQELLALKERLFEARALRKHGEEGSALNRLADNPTPASEVITTPTETDALGTSETVNGHPFHRQLHTSAS # NFTQHGTLTPQSAIPNQSVDTQYRSWEQEQSREQVIHGERIAKEQGTATVPGADSKPAPATSWNHTAVTLPGPAEDIVRQVNDLFKLLYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g356 ### # start gene g357 Scaffold_1 AUGUSTUS gene 1708147 1709118 0.79 + . g357 Scaffold_1 AUGUSTUS transcript 1708147 1709118 0.79 + . g357.t1 Scaffold_1 AUGUSTUS start_codon 1708147 1708149 . + 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_1 AUGUSTUS CDS 1708147 1709118 0.79 + 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_1 AUGUSTUS stop_codon 1709116 1709118 . + 0 transcript_id "g357.t1"; gene_id "g357"; # protein sequence = [MELWDKQDFSSFSSPLGRTISPKDGQVDIVTANVAIQGGKNEGFNGSVSSGLSLATFTEQKCVFLHPRVTPQNANALC # ALSSSNMETSVTENLILDCVSQQGDGEDMNFGQCIIASTSFFVEESFQKFTLAPVLVQSSNACEETRVVKSPEPVQYNSPSSTANPGAQSMSLSQAST # PTKIHQPRPLYFTSDMFPRTSLLSPFVPPLPLKTKSGDSPSAENPSFISNTDYLPPFRKQRSLPTTITSAMDKAKSSGTKCRPMPRVASFPACQESVV # IGRPIADSIVSDLRYVTPRLVPYIPSMPVHALTIFYQKRVRCYKISSWP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g357 ### # start gene g358 Scaffold_1 AUGUSTUS gene 1715888 1716564 0.39 + . g358 Scaffold_1 AUGUSTUS transcript 1715888 1716564 0.39 + . g358.t1 Scaffold_1 AUGUSTUS start_codon 1715888 1715890 . + 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_1 AUGUSTUS CDS 1715888 1716116 0.55 + 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_1 AUGUSTUS CDS 1716194 1716564 0.62 + 2 transcript_id "g358.t1"; gene_id "g358"; Scaffold_1 AUGUSTUS stop_codon 1716562 1716564 . + 0 transcript_id "g358.t1"; gene_id "g358"; # protein sequence = [MLIGAAGNFMSPISGLSENAFKTVIEIDTVRNILLCIEYLTHPQQLGTYNTVKATIPHVRATKGAYVHVSATLHYRVH # VSAAKAGVDAISNVVAVEEGPHGVRSNVLAPGFTSGTEGMRVMSGNKTNKTEGFSNPLGRFTEIHDVANVAVFLFSPAACYITGQVLPVDGGAEHLRG # DFFPYPSSVVDPSSVRKLLKGKM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g358 ### # start gene g359 Scaffold_1 AUGUSTUS gene 1719699 1720649 0.92 - . g359 Scaffold_1 AUGUSTUS transcript 1719699 1720649 0.92 - . g359.t1 Scaffold_1 AUGUSTUS stop_codon 1719699 1719701 . - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_1 AUGUSTUS CDS 1719699 1720649 0.92 - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_1 AUGUSTUS start_codon 1720647 1720649 . - 0 transcript_id "g359.t1"; gene_id "g359"; # protein sequence = [MRKRALVTSATQVQVMATADAEKEHLVGTLNNLLPELSKATDRVAIIKVKFVNGFASPKERLRDIHSSIMKSIEILRL # VYGDLQSLLRNTEDVMHDSNLHCVLDEGGVALATMSTYRETEDGLRAFCNKVEEYADQVKEEEIQLAKGLRALWNLKDKGERVLQNPGTVKNAALKRM # LNKISEVLDEVTDALELTRMWVALQWTSWQEDIRIHLAYEVQSNFEQCQEDLERWKALLQGEVQADITWNAARQATATAQEGLKKAWTEVEAVQLRLV # VDVYEIQSIPAAVEEFGDIIRALLDVRTKILAGFARKQSATF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g359 ### # start gene g360 Scaffold_1 AUGUSTUS gene 1732422 1732973 0.68 + . g360 Scaffold_1 AUGUSTUS transcript 1732422 1732973 0.68 + . g360.t1 Scaffold_1 AUGUSTUS start_codon 1732422 1732424 . + 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_1 AUGUSTUS CDS 1732422 1732973 0.68 + 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_1 AUGUSTUS stop_codon 1732971 1732973 . + 0 transcript_id "g360.t1"; gene_id "g360"; # protein sequence = [MTPSYQVDDVISYSFSNEDGSFPSLTYSEITPEEQQGISSLVPLLSSSDYLPDHRIGEIHRLQSAYEEYEIITSPEER # AIVQATFNLLIRRKEEEDEQKRLREHERAMYLEQARLDLLNSCVLEVEAARAAGGHSFFPTQEQSFDYRSHTIECECCDAPSTEGTGEISPLPAFCAI # FSGTTIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g360 ### # start gene g361 Scaffold_1 AUGUSTUS gene 1736139 1737371 0.99 - . g361 Scaffold_1 AUGUSTUS transcript 1736139 1737371 0.99 - . g361.t1 Scaffold_1 AUGUSTUS stop_codon 1736139 1736141 . - 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_1 AUGUSTUS CDS 1736139 1737371 0.99 - 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_1 AUGUSTUS start_codon 1737369 1737371 . - 0 transcript_id "g361.t1"; gene_id "g361"; # protein sequence = [MENATGKPQTQCRYLLVFTVTEESGVLYLVPSENGQGKRVVRRQHPRPTSLPMDENFDAYTLETRVPLTETAETINQI # TRTTSWTPTSPPLDEDFDAWTYTNTAGPVTGTGTIYEEDLNQLDSEDGEQDERRSGERGYDGSESQGGNKHRLRRRSVRRLGRKYSLTLSPSRASRSE # GFWIRNEYHSTQENGRGTRPHYDPERRSVIHYEVNEMPSPIGNNGWHLDLNRKEVDEQNLGWIPEREGAGQSHWKVTRSHTGASRTRNENGQFQGEGV # KKKDSTRSDTRRRKDHIHQTISRKGPVANDYEVVDNRVLEDGPERTVTISTWREKVANESRRSEVEMSVYYLNADDYVMDSGIEETRRKEEFRDSMKG # QSGASRSRKGKGKQRDLLDDGWTRSDVSDYNTLNLAVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g361 ### # start gene g362 Scaffold_1 AUGUSTUS gene 1738935 1739240 0.73 + . g362 Scaffold_1 AUGUSTUS transcript 1738935 1739240 0.73 + . g362.t1 Scaffold_1 AUGUSTUS start_codon 1738935 1738937 . + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_1 AUGUSTUS CDS 1738935 1739240 0.73 + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_1 AUGUSTUS stop_codon 1739238 1739240 . + 0 transcript_id "g362.t1"; gene_id "g362"; # protein sequence = [MSYHYYHNQCWYVNLDIMWRRIDSWLNHPAYFTPLFTQEVSSTNYDSRVSKAQLKSKIDLMTSDVGIAGTKSLAQIMI # GVAILDVTDMDLWNSWRLCSWLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g362 ### # start gene g363 Scaffold_1 AUGUSTUS gene 1742377 1743819 0.93 - . g363 Scaffold_1 AUGUSTUS transcript 1742377 1743819 0.93 - . g363.t1 Scaffold_1 AUGUSTUS stop_codon 1742377 1742379 . - 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_1 AUGUSTUS CDS 1742377 1743819 0.93 - 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_1 AUGUSTUS start_codon 1743817 1743819 . - 0 transcript_id "g363.t1"; gene_id "g363"; # protein sequence = [MILDLNFALILASSSAMDTFPPELLIQMFAIQPPQSIQSPPNYTQVCSRWRSIAYTSPELWTTLIIELLPALKTKADA # AYLEEALTSWVLRSRKSIDLTVYGPFFREGWDQPSELQKRLYGKVNCKIIVKFSNKWRRLITPYTWDAHNFPHSLKHFAALEELQVAVGTCPLSTSNH # STFTKAPRLFKLNLDLPMSPSFACLETLIPVTVSDLTLSSDPGVFGVSEGFMRGFLQLEQLQNLTHMDFSRVGWTTPHVLPSTILPHLQELTLGGTIT # ALGDFLGVLTLPSLRKLSLSTSRFDGNGDHGPVVGPALIDLLKRSYRDKCGLLALSLTWMLARDINSGQAITLEALCHILSAASTITELHIRSEGHTD # TARLMEILRYDGVSPEKQILPHLKSFSAESLSDLDQGYFLDFIYSRWWPDGSQPVVGVSKLQKLILSGCTLTEKTREQLDICYNEAWEDMAGREPHLG # SPGVRRLMQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g363 ### # start gene g364 Scaffold_1 AUGUSTUS gene 1754624 1755736 0.41 + . g364 Scaffold_1 AUGUSTUS transcript 1754624 1755736 0.41 + . g364.t1 Scaffold_1 AUGUSTUS start_codon 1754624 1754626 . + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_1 AUGUSTUS CDS 1754624 1755736 0.41 + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_1 AUGUSTUS stop_codon 1755734 1755736 . + 0 transcript_id "g364.t1"; gene_id "g364"; # protein sequence = [MDAHNLSVVLCPNLVSGASPIRDVQMCAVPGGPALFEQQEQQQQPSSLPSSSSIPSLSISNKATASAEGKTTLGAIIK # LCIQRYYEVFDEVVDPSEAIVAHPMSEADYAAGYGGGDRYELRDSTPERSRDASAEPSDDELQQHQQRAWKGNAGFQGFPQPGSVIGNGFHERSDFVP # QSRIDNHKRNSSGFHTNPDDDEDIDDAMLVMPIGPNHGRHTDPNGGGPSTSSSSSSMSPQPHPQHRNTLSNGSRRSKPTRSVHTDYGVPPSSFSSSSL # AQSASYATYSRGKARSTISIEKGSGSTIGPGKKGSISIGRGTNRKSTGSGVAAIGVTAEGFFAPPSGVEVPPVPPLPGRGIGNGRAIPGEEGETRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g364 ### # start gene g365 Scaffold_1 AUGUSTUS gene 1762199 1762894 0.37 - . g365 Scaffold_1 AUGUSTUS transcript 1762199 1762894 0.37 - . g365.t1 Scaffold_1 AUGUSTUS stop_codon 1762199 1762201 . - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_1 AUGUSTUS CDS 1762199 1762894 0.37 - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_1 AUGUSTUS start_codon 1762892 1762894 . - 0 transcript_id "g365.t1"; gene_id "g365"; # protein sequence = [MKHVRFSSINALYSPVPSTPYVFTTSTSTSSSRSSHSEDSKPSRRRRHVSKLTTHSRSKSLDIPAPITRIHYLLAFSP # YQLPPIPYHLSTHPSITKSFISADVLSEPATDPPVSSLIITCPHLQWEFTVTPSSRKASCVSVIDVLYALYRGLRIAVHPVEYKALPSPEAVANVNEA # YYSRCNSILEAQARQEEQSKGIKRVDFLIGRTRFLGLSKKSRRRDDGLVWELNVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g365 ### # start gene g366 Scaffold_1 AUGUSTUS gene 1776776 1777114 0.71 - . g366 Scaffold_1 AUGUSTUS transcript 1776776 1777114 0.71 - . g366.t1 Scaffold_1 AUGUSTUS stop_codon 1776776 1776778 . - 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_1 AUGUSTUS CDS 1776776 1777114 0.71 - 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_1 AUGUSTUS start_codon 1777112 1777114 . - 0 transcript_id "g366.t1"; gene_id "g366"; # protein sequence = [MVGCLLNDDASELDDPMTTTPTIKLLHLSFGCELPELVKQYLMASAVDDLLQILVQPMSSESDKSIRRTKVDEITMDL # PITTIADSLPMTFQTGSLNFGKTDVWWWWQPTYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g366 ### # start gene g367 Scaffold_1 AUGUSTUS gene 1780180 1780998 0.25 + . g367 Scaffold_1 AUGUSTUS transcript 1780180 1780998 0.25 + . g367.t1 Scaffold_1 AUGUSTUS start_codon 1780180 1780182 . + 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_1 AUGUSTUS CDS 1780180 1780337 0.26 + 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_1 AUGUSTUS CDS 1780638 1780998 0.76 + 1 transcript_id "g367.t1"; gene_id "g367"; Scaffold_1 AUGUSTUS stop_codon 1780996 1780998 . + 0 transcript_id "g367.t1"; gene_id "g367"; # protein sequence = [MWLSHYVGGTGRRKIIHQGDSKFMMDLTLPLQPMRILYWMGMMEILALVLGSEGCHAVQCDCTDIQNNARFNIISFGP # GFPFQAPENPDAYFSSPIPTISEDIAGAARPGKWMVKLLRIGISSADRNDYSWIDMDSPQTSSSIIQGIDILMDTGKKQRIALVLNLKLIQEPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g367 ### # start gene g368 Scaffold_1 AUGUSTUS gene 1782774 1783946 0.36 - . g368 Scaffold_1 AUGUSTUS transcript 1782774 1783946 0.36 - . g368.t1 Scaffold_1 AUGUSTUS stop_codon 1782774 1782776 . - 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_1 AUGUSTUS CDS 1782774 1783946 0.36 - 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_1 AUGUSTUS start_codon 1783944 1783946 . - 0 transcript_id "g368.t1"; gene_id "g368"; # protein sequence = [MPDLPQELIDRFVDDHSESTEDLKNLSLVGRCWLHRARYHLFRLITLAPQDPKEIREYYAYLRRRVSMPARGGRNHYH # ALTSSEQRLLHSSLTQNPQPQKQFLSSFSDTLPYVRGLRLESSIRIGGGRKIPPMEYFHRWLGYGNEYAEESLLMRDLVSYDDNFLEKQNERWEAVDL # PWGHRAGLHELPFRNLRYLHIQWSAFGWISSSPVAEDDGDFPDSVNPDMWPGYQLGKLLKSSADTLNHVSIDEYPGFQLEQYGTPPHGTDALLDILAE # NAPNLKSLCLGGLMVPRRMSPHPMHDHHIDSPDPVPFFSRDRPAYRTGEEVPPVYSDPIYNDGTTPRQAIRLSLERLYLRGFDSKSTLLIEDVLLNRG # NPFIQYRISCSIGNAGKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g368 ### # start gene g369 Scaffold_1 AUGUSTUS gene 1784395 1785834 1 + . g369 Scaffold_1 AUGUSTUS transcript 1784395 1785834 1 + . g369.t1 Scaffold_1 AUGUSTUS start_codon 1784395 1784397 . + 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_1 AUGUSTUS CDS 1784395 1785834 1 + 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_1 AUGUSTUS stop_codon 1785832 1785834 . + 0 transcript_id "g369.t1"; gene_id "g369"; # protein sequence = [MTRLASFSFDFNKLILQSSSLNQFPPELLTRIFAIYPPQTIQSPLNYTQVCSRWRSVAYSSPELWTTLVIEHPPALET # ESDATYYEAALTSWVLRCSDLSVDISFLGRYYRGTWDLPSQFQISLYVPICNKLLVDFSNKWRRLKAPYFWSAHFFPSSLKQFAALEELELGVGNCSP # PKNDHTPFPKTPRLFKLSLNLSRILRFHCIKDFIPETVRDLTVTSASGPIGISGDFAIEFLQPKRLQHLTHMDMSQFGWTTPHVLPSITLPRLQELTL # DGAITALGDILGVFTLPSLRKLSLSISRFDGDGEHGPVVGPALIALLKRSYHDQCGLVALGLTSMLASDNSNEAISLEALHCILSLASTIKELHICSE # GYTDTARLMEILRYDRVSPEKQILPLLTTFSVESLINLDQDFLDFVHSRWWPNNSSPRMVGVAKLEKLIVSYCDLTEEIEEQLDACYEGGLEVEVEVE # SSEQSSILE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g369 ### # start gene g370 Scaffold_1 AUGUSTUS gene 1786990 1787585 0.84 + . g370 Scaffold_1 AUGUSTUS transcript 1786990 1787585 0.84 + . g370.t1 Scaffold_1 AUGUSTUS start_codon 1786990 1786992 . + 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_1 AUGUSTUS CDS 1786990 1787131 0.84 + 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_1 AUGUSTUS CDS 1787194 1787585 0.99 + 2 transcript_id "g370.t1"; gene_id "g370"; Scaffold_1 AUGUSTUS stop_codon 1787583 1787585 . + 0 transcript_id "g370.t1"; gene_id "g370"; # protein sequence = [MLNAIVSRVSAADSLVQPTEIDNPMRLVALYKQAAINAKEAGFDGIEVHGEEAISSTSSSIADQISAQTAGVGLLRIA # RGSGWKYLELLLTFGGPIEWVSSSIQLEGIMIWGKLVGTMFGLSVTYLIENHDRMPLEETLETYNYFITQVDQLGLAYIAIQRYSEFDDPIIEGAQSY # L] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g370 ### # start gene g371 Scaffold_1 AUGUSTUS gene 1791547 1792437 0.79 - . g371 Scaffold_1 AUGUSTUS transcript 1791547 1792437 0.79 - . g371.t1 Scaffold_1 AUGUSTUS stop_codon 1791547 1791549 . - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_1 AUGUSTUS CDS 1791547 1792306 0.79 - 1 transcript_id "g371.t1"; gene_id "g371"; Scaffold_1 AUGUSTUS CDS 1792400 1792437 0.79 - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_1 AUGUSTUS start_codon 1792435 1792437 . - 0 transcript_id "g371.t1"; gene_id "g371"; # protein sequence = [MDSLILTKTNLHKYNKGFQTLFFAFHVDLAMQRPADSVIKVAGDAWIKLRFLVPTIASLVILDDNDIPSLQYYSPSTS # ELQKWVDQTFTVHRKSGSVNLGALRSELGLGKVPSDNGQQTWMHLSISYSNTISSMGLMIHTHHSPFDGTAMKVLANLYLKEFAKGLSGENVTGDLKW # GAEVDHLLPAAFNVMRPTEPIPIDPSSVEEPSFAHPFYAASRSVIEAFVFNSQVCSYSIDNLAHNQLMILEWLLSQAQERRSWMACYVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g371 ### # start gene g372 Scaffold_1 AUGUSTUS gene 1798512 1799698 0.53 + . g372 Scaffold_1 AUGUSTUS transcript 1798512 1799698 0.53 + . g372.t1 Scaffold_1 AUGUSTUS start_codon 1798512 1798514 . + 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_1 AUGUSTUS CDS 1798512 1798944 0.53 + 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_1 AUGUSTUS CDS 1799076 1799698 0.53 + 2 transcript_id "g372.t1"; gene_id "g372"; Scaffold_1 AUGUSTUS stop_codon 1799696 1799698 . + 0 transcript_id "g372.t1"; gene_id "g372"; # protein sequence = [MVAPTQGRSITQIESPILQAIACYTGKQPQHCATSNSPRDPPPHFNLDAGNHDYQDPPVDPDDPGADSNNPDNDNPDD # DSSGLPRGGPGDPSGPCTPISPDIPNEQHAMLELLAGFKGSIETLGTILAALNQPSDSSESKSKVKAKEWFVPDIVDLDLDSLPAWTSLFKAPVKELQ # DNFGIYDAQGKAEDSLSNLKMKETENIWFNTLATSTNWDSAALKWAYGRDLAEHIKDEMAHLPEPVTLTDYHQEVLCIDNRYWKREETKKHEAGMPFI # AWNPKKGSSDFKAGSTNQQNNIQPLGSSALFTPKPKPFNGGKPNNSGKPQNFLNSGEPAVSAPHSIISVQMGKFFLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g372 ### # start gene g373 Scaffold_1 AUGUSTUS gene 1800471 1801637 0.82 + . g373 Scaffold_1 AUGUSTUS transcript 1800471 1801637 0.82 + . g373.t1 Scaffold_1 AUGUSTUS start_codon 1800471 1800473 . + 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_1 AUGUSTUS CDS 1800471 1801637 0.82 + 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_1 AUGUSTUS stop_codon 1801635 1801637 . + 0 transcript_id "g373.t1"; gene_id "g373"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g373 ### # start gene g374 Scaffold_1 AUGUSTUS gene 1806722 1808138 0.24 + . g374 Scaffold_1 AUGUSTUS transcript 1806722 1808138 0.24 + . g374.t1 Scaffold_1 AUGUSTUS start_codon 1806722 1806724 . + 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_1 AUGUSTUS CDS 1806722 1807230 0.24 + 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_1 AUGUSTUS CDS 1807283 1808138 0.68 + 1 transcript_id "g374.t1"; gene_id "g374"; Scaffold_1 AUGUSTUS stop_codon 1808136 1808138 . + 0 transcript_id "g374.t1"; gene_id "g374"; # protein sequence = [MLVWNPSFFVLFTQRSWPVPPTTPLLLLLSLHYITPGIEYAEFADIFDEIAADTLPEHKPYDLKIDLEEGASLPLSRI # YLLSEKELVALKDFIDKHLATGAITPSPSPHNTPVLFVPKKDGRLWLCMDFCGLTTSPRRTTTLCCCSWTSSTLQKELKSIPIWTLLTLIIYSYEWKV # MPFGLTNAPAAFQCFVNDIFSDMLDACVIVYLDDILIYSDTLEEHQEHVKELLQWSRKHRLYTNPDKCEFNMDTVEHLGYILSPDGLTMSKEKVQTIL # EWPVPRKVKDIQSFLGFANFYRRFIYNYSDIVVPMTRLTRKGAPWIWDNDCQEAFENLKIAFTSAPILAHWEPNRPIIVETNASDYAIVAILSIQTVD # SEIHPLASFPELFTLRSSTTTHTTKSSLPSSKPLKLGVIIWKVLAIRWTLSPITKILSIFLLPRFSPVDRSIGQSISTNSTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g374 ### # start gene g375 Scaffold_1 AUGUSTUS gene 1808739 1809221 0.66 + . g375 Scaffold_1 AUGUSTUS transcript 1808739 1809221 0.66 + . g375.t1 Scaffold_1 AUGUSTUS start_codon 1808739 1808741 . + 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_1 AUGUSTUS CDS 1808739 1809221 0.66 + 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_1 AUGUSTUS stop_codon 1809219 1809221 . + 0 transcript_id "g375.t1"; gene_id "g375"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDQSSKQAIFIPTFDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKV # LSMELHYTSGYHPEANGQTERVNQTLEQYIRIIVPTNKMTGHPYFRSPSLPITTLQCFHWYYSVLLLTKDTIPISPFGPRST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g375 ### # start gene g376 Scaffold_1 AUGUSTUS gene 1816602 1817531 0.6 - . g376 Scaffold_1 AUGUSTUS transcript 1816602 1817531 0.6 - . g376.t1 Scaffold_1 AUGUSTUS stop_codon 1816602 1816604 . - 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_1 AUGUSTUS CDS 1816602 1817531 0.6 - 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_1 AUGUSTUS start_codon 1817529 1817531 . - 0 transcript_id "g376.t1"; gene_id "g376"; # protein sequence = [MSAMSTERPSSSKLESKKQKSALSRGNTTQAQKPSQAASSTTITVVAGQRLVPIPEQSFGDKPSEDVKTPKGRQPMTR # EPPPVDPGPTGMTMGPPQWRYASMGYAQTTSSPMGGFAYSPTWGMRGPPPGPVPQLDMESASNAGGRVSSQVATIERIQGENADPLTLQQREKLPERV # SEQSRALSRRLPTPPAQSLNPPPPRRGSSLSSLLRSPAVNTPNWERTHAIHHSRTNFPVQPLSEMTLWLEDFIRIQECTPEDIALVLQEVLEMMGIKI # LGNGIEFSDLRVQFLAVGTQLEIDLSGKAVRPGSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g376 ### # start gene g377 Scaffold_1 AUGUSTUS gene 1819719 1820318 1 + . g377 Scaffold_1 AUGUSTUS transcript 1819719 1820318 1 + . g377.t1 Scaffold_1 AUGUSTUS start_codon 1819719 1819721 . + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_1 AUGUSTUS CDS 1819719 1820318 1 + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_1 AUGUSTUS stop_codon 1820316 1820318 . + 0 transcript_id "g377.t1"; gene_id "g377"; # protein sequence = [MAASTNWDSAALKWAYGRGLAERIKDEMARLPEPAMLADYHQEVLRIDNRYWKREETRKREAGKPFVAWNPKKGSSDF # KTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNFGQSGGQRPAFNHLGADGKVLPSERERRKKNNLCLFCGGKHQIADCNKRKARESK # GRAAKVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g377 ### # start gene g378 Scaffold_1 AUGUSTUS gene 1822231 1823268 1 + . g378 Scaffold_1 AUGUSTUS transcript 1822231 1823268 1 + . g378.t1 Scaffold_1 AUGUSTUS start_codon 1822231 1822233 . + 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_1 AUGUSTUS CDS 1822231 1823268 1 + 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_1 AUGUSTUS stop_codon 1823266 1823268 . + 0 transcript_id "g378.t1"; gene_id "g378"; # protein sequence = [MNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLK # EFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPT # MTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVKQNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQP # RRQQISATAAPFTLFPNESVQIAASIPTPVAGPATPSPANQDFSTQIGQIRELLDRANAMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g378 ### # start gene g379 Scaffold_1 AUGUSTUS gene 1823319 1826828 0.99 + . g379 Scaffold_1 AUGUSTUS transcript 1823319 1826828 0.99 + . g379.t1 Scaffold_1 AUGUSTUS start_codon 1823319 1823321 . + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_1 AUGUSTUS CDS 1823319 1826828 0.99 + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_1 AUGUSTUS stop_codon 1826826 1826828 . + 0 transcript_id "g379.t1"; gene_id "g379"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVAD # IISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVRE # VLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQ # QEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDII # TDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNQQQTVLKPGHFTKIAASILRNPLEDRIRKASEREAQV # LEGLETVKKHGLQRLANGIAEWEEDNGLVYYRGRVYVPADNNLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEICARKKIQ # RHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLA # RLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILRE # ARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVFMSTNYIHGKVTP # SMAKYQHHQSRCT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g379 ### # start gene g380 Scaffold_1 AUGUSTUS gene 1827717 1828370 0.87 + . g380 Scaffold_1 AUGUSTUS transcript 1827717 1828370 0.87 + . g380.t1 Scaffold_1 AUGUSTUS start_codon 1827717 1827719 . + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_1 AUGUSTUS CDS 1827717 1828370 0.87 + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_1 AUGUSTUS stop_codon 1828368 1828370 . + 0 transcript_id "g380.t1"; gene_id "g380"; # protein sequence = [MEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFNAENPP # FGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLITVNIAQGIAPTLKEAIKRAI # SVDVYLHDPTMTGRNSGYPPRIPLILPLLTPTLWTLMQPHQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g380 ### # start gene g381 Scaffold_1 AUGUSTUS gene 1829158 1831452 0.92 + . g381 Scaffold_1 AUGUSTUS transcript 1829158 1831452 0.92 + . g381.t1 Scaffold_1 AUGUSTUS start_codon 1829158 1829160 . + 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_1 AUGUSTUS CDS 1829158 1831452 0.92 + 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_1 AUGUSTUS stop_codon 1831450 1831452 . + 0 transcript_id "g381.t1"; gene_id "g381"; # protein sequence = [MDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPELEPPAENP # HIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFSESASERLP # AHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRL # QGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRL # EKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFD # TLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSN # LEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLK # TVKEHGLQRLANGIAEWEETMGWSTTEVEYTYQQTTTYALRYSVNATTIQLQDTPDYTGHSTWSVPISGGLRCALLWKNTLRDARFVPVRRSSDTHGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g381 ### # start gene g382 Scaffold_1 AUGUSTUS gene 1853716 1854269 0.37 - . g382 Scaffold_1 AUGUSTUS transcript 1853716 1854269 0.37 - . g382.t1 Scaffold_1 AUGUSTUS stop_codon 1853716 1853718 . - 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_1 AUGUSTUS CDS 1853716 1854170 0.78 - 2 transcript_id "g382.t1"; gene_id "g382"; Scaffold_1 AUGUSTUS CDS 1854254 1854269 0.38 - 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_1 AUGUSTUS start_codon 1854267 1854269 . - 0 transcript_id "g382.t1"; gene_id "g382"; # protein sequence = [MKYEQVGHYIVDAVGNPDPVEGVNVAKDDALSYPKFSRREYPSVINDLMDPVVTPFVEKCVGISNTLIEIFNDKLGLP # EGTLAKFHKREEFSSSETRTIKAPANLTPGKLAIGGHTDFGTLTLLVNNLGGLQVLPPGTTEWRYARVSMFDNWDGSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g382 ### # start gene g383 Scaffold_1 AUGUSTUS gene 1856296 1856766 0.47 + . g383 Scaffold_1 AUGUSTUS transcript 1856296 1856766 0.47 + . g383.t1 Scaffold_1 AUGUSTUS start_codon 1856296 1856298 . + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_1 AUGUSTUS CDS 1856296 1856766 0.47 + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_1 AUGUSTUS stop_codon 1856764 1856766 . + 0 transcript_id "g383.t1"; gene_id "g383"; # protein sequence = [MNRGSSSSLSSTPRIPELKAAFDALASGHRINGHLTLTVSTLDELAYQYHVLSGKWMIFANRDTIDALWRDVVQMVCM # YRKRGTAKVSVNEDDRDNRVICVYVENFADFEEVRGLREDLRTVVGVKKKIPFKMDAYTHMGIYTGNQWGIPPTRWFE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g383 ### # start gene g384 Scaffold_1 AUGUSTUS gene 1857635 1857928 0.94 - . g384 Scaffold_1 AUGUSTUS transcript 1857635 1857928 0.94 - . g384.t1 Scaffold_1 AUGUSTUS stop_codon 1857635 1857637 . - 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_1 AUGUSTUS CDS 1857635 1857928 0.94 - 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_1 AUGUSTUS start_codon 1857926 1857928 . - 0 transcript_id "g384.t1"; gene_id "g384"; # protein sequence = [MGQLHGVLNPQQPLLNMSKMILREDHPQTLEMIQALTMTLWHLKRKDDALELGQTLPEGLRIFWAKQIPSPTPLPTSI # ASDLPKEQDWEIIPIEYVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g384 ### # start gene g385 Scaffold_1 AUGUSTUS gene 1859445 1859867 0.88 - . g385 Scaffold_1 AUGUSTUS transcript 1859445 1859867 0.88 - . g385.t1 Scaffold_1 AUGUSTUS stop_codon 1859445 1859447 . - 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_1 AUGUSTUS CDS 1859445 1859867 0.88 - 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_1 AUGUSTUS start_codon 1859865 1859867 . - 0 transcript_id "g385.t1"; gene_id "g385"; # protein sequence = [MSTQHCSLSRLTKIYFSKANTEQSIQASYFVIVIDNGIVQAQDWHAGIHWLHSNEESWFIIMDNADDPKIHLAKYLPS # CGHGNIIITSRNPDLQDVAAQSLEVQNMVPTEGIQLLSEKAVGGPLTADQEKKVAQIAKKLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g385 ### # start gene g386 Scaffold_1 AUGUSTUS gene 1861438 1862214 0.88 + . g386 Scaffold_1 AUGUSTUS transcript 1861438 1862214 0.88 + . g386.t1 Scaffold_1 AUGUSTUS start_codon 1861438 1861440 . + 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_1 AUGUSTUS CDS 1861438 1862214 0.88 + 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_1 AUGUSTUS stop_codon 1862212 1862214 . + 0 transcript_id "g386.t1"; gene_id "g386"; # protein sequence = [MTKTSLIVPLLQTSSFSSSTPYVKYLPTIFSPASHVPYMTTTNNWITAYFNEYTASLSNVERFTRYCRPSFRLNYNQL # QSQSGPDNFVIPTTKWIAVNRGLSSLESTSLPRIPELKAAFDALASVHQTNGHSILTVSKLDNLAIKYNILSGKWLIFTSVNTVDALWQDVVQMVCMY # RQRGFAKVSVNQEEEVGKMNNSRVICVYVEDFTDLEEVRSLRDDLRTVVGVERKIPFKMDAYSHMGIYKGNKWGISPARWFE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g386 ### # start gene g387 Scaffold_1 AUGUSTUS gene 1886701 1887246 0.97 + . g387 Scaffold_1 AUGUSTUS transcript 1886701 1887246 0.97 + . g387.t1 Scaffold_1 AUGUSTUS start_codon 1886701 1886703 . + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_1 AUGUSTUS CDS 1886701 1887246 0.97 + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_1 AUGUSTUS stop_codon 1887244 1887246 . + 0 transcript_id "g387.t1"; gene_id "g387"; # protein sequence = [MLNFYAVYPCTVYSRIVLLNARVAGRPIEANLTLGIIHAGQKYEHWLLAIGNDQAGSELLSAVVKFDKHGNTLPVEYL # IAHKSDRRKFTDYNPVPEVTQLGKASFKDEKEKENIIKDILAIEIDVPSNQKGGNCMDFIKSALKLMKDKGNVDESVVGKYDDVYKKRYHDVVKKVFD # ADLQP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g387 ### # start gene g388 Scaffold_1 AUGUSTUS gene 1890072 1890485 0.35 - . g388 Scaffold_1 AUGUSTUS transcript 1890072 1890485 0.35 - . g388.t1 Scaffold_1 AUGUSTUS stop_codon 1890072 1890074 . - 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_1 AUGUSTUS CDS 1890072 1890485 0.35 - 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_1 AUGUSTUS start_codon 1890483 1890485 . - 0 transcript_id "g388.t1"; gene_id "g388"; # protein sequence = [MDEIGNEIMNVVGMDISNNSGNLLGGAFHNFQVMLDPPTRSQEQQATPGEGTIAPRLLDVRVDDTPHEIASMYSTAMG # VKDEYNMNFNENQLFVIPSYPGYMGPGDEHGPQDHDVGNAERVMAALQRRFSRVQTVRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g388 ### # start gene g389 Scaffold_1 AUGUSTUS gene 1895706 1896005 0.51 - . g389 Scaffold_1 AUGUSTUS transcript 1895706 1896005 0.51 - . g389.t1 Scaffold_1 AUGUSTUS stop_codon 1895706 1895708 . - 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_1 AUGUSTUS CDS 1895706 1896005 0.51 - 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_1 AUGUSTUS start_codon 1896003 1896005 . - 0 transcript_id "g389.t1"; gene_id "g389"; # protein sequence = [MRAMILANIATEADLANGTRGTVTDIVLDDREPVNHEVKDGATPAALPPAIVYFKPDGNTSVRLEGFPVGLLPIVPQS # NKFVAAVEITRVVPFYGVNSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g389 ### # start gene g390 Scaffold_1 AUGUSTUS gene 1898159 1899484 0.98 - . g390 Scaffold_1 AUGUSTUS transcript 1898159 1899484 0.98 - . g390.t1 Scaffold_1 AUGUSTUS stop_codon 1898159 1898161 . - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_1 AUGUSTUS CDS 1898159 1899484 0.98 - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_1 AUGUSTUS start_codon 1899482 1899484 . - 0 transcript_id "g390.t1"; gene_id "g390"; # protein sequence = [MVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISS # PVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQAL # MNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGF # LGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQ # PAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLPADKPDGPSICHGLTFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g390 ### # start gene g391 Scaffold_1 AUGUSTUS gene 1900572 1901410 0.38 - . g391 Scaffold_1 AUGUSTUS transcript 1900572 1901410 0.38 - . g391.t1 Scaffold_1 AUGUSTUS stop_codon 1900572 1900574 . - 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_1 AUGUSTUS CDS 1900572 1901098 0.49 - 2 transcript_id "g391.t1"; gene_id "g391"; Scaffold_1 AUGUSTUS CDS 1901245 1901410 0.38 - 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_1 AUGUSTUS start_codon 1901408 1901410 . - 0 transcript_id "g391.t1"; gene_id "g391"; # protein sequence = [MSTPVPPAPNTPAEDLMAQLILQVANLATAMEERSSSKSSMNKPEVFKGKDGTEAQNPPFGGNWDTFLKEFSQRFEPM # DPGMEARSKIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIELRERFFTALLPEIRQHLITINIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYP # PTHTAHTTPADPHAMDIDATHTSNGNTREAFLARIRGRCFGCGAQGHVKQNCPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g391 ### # start gene g392 Scaffold_1 AUGUSTUS gene 1902069 1903517 0.95 - . g392 Scaffold_1 AUGUSTUS transcript 1902069 1903517 0.95 - . g392.t1 Scaffold_1 AUGUSTUS stop_codon 1902069 1902071 . - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_1 AUGUSTUS CDS 1902069 1903517 0.95 - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_1 AUGUSTUS start_codon 1903515 1903517 . - 0 transcript_id "g392.t1"; gene_id "g392"; # protein sequence = [MDQTLTLDIQERAEGSVSDAEVYEAQQKEGMAQELYAYVAMECAFGAGVFDREYEIDDGVETAGRCSIDDKVDFQQWH # QQLVDYTATGGLLVENEMVDIGRVTVNPPTVAGVSVVAHGEDDPTAGGVGGNLRKMLNEEQARAHDIVVDHILRTVNGNPPPQLFMLLLGPGGTGKTV # VINAINETMTKLGVGGWLAKTATTGVAASHFGGKTLHSWAGIKVAAKASDDLIGNASAAVQKRRTANIGLPRYLLCNECSMATKELVGRTSTICSHVA # TVENKNYSDSYFGGMNVVLCGDFHQFPPVGQPNGALYLPNAPGANSYAVLGRHLFSQFTTVVMLKKQICVKDTRWMELLDRLRIGACNADDMEQLQKL # RLDVDTNPPVNFAQPGWNSCILITPRNSVRRKWNKAALRRHCKLHATRLYSCPAEDTIGGIPLSNEQLLRIARLDSVIKYAAPIIFLFSLSRRLYLYD # TSSHHCQTPIDY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g392 ### # start gene g393 Scaffold_1 AUGUSTUS gene 1906133 1906858 0.62 - . g393 Scaffold_1 AUGUSTUS transcript 1906133 1906858 0.62 - . g393.t1 Scaffold_1 AUGUSTUS stop_codon 1906133 1906135 . - 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_1 AUGUSTUS CDS 1906133 1906858 0.62 - 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_1 AUGUSTUS start_codon 1906856 1906858 . - 0 transcript_id "g393.t1"; gene_id "g393"; # protein sequence = [MCIQSLSGSPAKRPPLSLSNNLWIGDVPFELRILTLCERVLVSRLFSAAYIIKLYPKSQGARGWPKEMLTSAVKGNMS # SYFLNTEDIVGMIDPGFVPPCPGILTATIGVTFIGPQNIPLKFLPPYLRVRRKRVKDALEWLIRNNPLYLGLKLSAQHLALLPEDGVPPEVLDNLKWI # DDVRVLDRENGGYVPNLESPENDEDEVASGEGTVGDDVVEVFHPSYGMISDNAQCLLSILTDMRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g393 ### # start gene g394 Scaffold_1 AUGUSTUS gene 1938178 1939149 0.99 + . g394 Scaffold_1 AUGUSTUS transcript 1938178 1939149 0.99 + . g394.t1 Scaffold_1 AUGUSTUS start_codon 1938178 1938180 . + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_1 AUGUSTUS CDS 1938178 1939149 0.99 + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_1 AUGUSTUS stop_codon 1939147 1939149 . + 0 transcript_id "g394.t1"; gene_id "g394"; # protein sequence = [MNGSLDILFASNGDPDFDIDPLSDLDPKHLNAPLDDMGARIELKNALGSQPDVPQTLTSQINFWAWIGSNPLFNGPSS # TLDHNTPNTNSFDNSIVDQPQNFSLNITTGSLDANAEQDILQTNSSLGSLASTDITSALSASVTPLSAFQTFEADPNAFHNFNPFDNTVIDQPQNFDL # NVMTGDIPEYNAYSGNGGSVNWGPSAFASDANMSAACNTTVHPTFDSFKDDPSCSNGFNPFDNALVAQPHNCTPSLEVSRGDLDFNSGQSGLANFDTN # AVPSIFADNSNVSISSYPASGYPSAPLPSTVQADSLSAKRSGSNPSRPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g394 ### # start gene g395 Scaffold_1 AUGUSTUS gene 1939217 1939546 0.78 + . g395 Scaffold_1 AUGUSTUS transcript 1939217 1939546 0.78 + . g395.t1 Scaffold_1 AUGUSTUS start_codon 1939217 1939219 . + 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_1 AUGUSTUS CDS 1939217 1939546 0.78 + 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_1 AUGUSTUS stop_codon 1939544 1939546 . + 0 transcript_id "g395.t1"; gene_id "g395"; # protein sequence = [MNDTDTSDMNSLGYDAQAPLPYNNLVTDCTHTSPSEASGSGLNSGYTTAQMFQSSYTQPPAQYHDANRGAVSSEQQMI # YVHPLANQASGSSVYAPFHDHQAQNFAFVEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g395 ### # start gene g396 Scaffold_1 AUGUSTUS gene 1943880 1944641 0.99 - . g396 Scaffold_1 AUGUSTUS transcript 1943880 1944641 0.99 - . g396.t1 Scaffold_1 AUGUSTUS stop_codon 1943880 1943882 . - 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_1 AUGUSTUS CDS 1943880 1944641 0.99 - 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_1 AUGUSTUS start_codon 1944639 1944641 . - 0 transcript_id "g396.t1"; gene_id "g396"; # protein sequence = [MYPASVVFRLAAWLWPKITARTGGGWKDVLGEDEVFSSFHCFSENDFADDKSTLLRLFVAEKAPGESSIDFRDSYHID # FKVPTELIQSGFDSRLQPNPTQQKYNFRVMGPFCVCNILAPFVLIWRDGQSSNPTLTLIISSLFQIVTLVFNYKDIDDQSINCRFQNIPQPLVQGSHY # TVPPSPFRKRRIGGSMSTRWSNVHHPNDFINATIGVSGTSTATTGPSVVGAAMLALEEQDVTEGITDRKGKLRAVQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g396 ### # start gene g397 Scaffold_1 AUGUSTUS gene 1947473 1947949 0.81 + . g397 Scaffold_1 AUGUSTUS transcript 1947473 1947949 0.81 + . g397.t1 Scaffold_1 AUGUSTUS start_codon 1947473 1947475 . + 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_1 AUGUSTUS CDS 1947473 1947949 0.81 + 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_1 AUGUSTUS stop_codon 1947947 1947949 . + 0 transcript_id "g397.t1"; gene_id "g397"; # protein sequence = [MTSVFVSSASTSSNSTLSPTTFHILADNTTLISLISAITTNCSSNINTSSSSSNTSNPSPYNASDPNAPQPESAIGYY # RASSVVLTLNGYNNSAALSSDENATNTPLPTGIDTTLEDCLNQTIGAAVPLIDGARSINTGVGSVALLSMLFVVLQRLVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g397 ### # start gene g398 Scaffold_1 AUGUSTUS gene 1957547 1958254 0.99 + . g398 Scaffold_1 AUGUSTUS transcript 1957547 1958254 0.99 + . g398.t1 Scaffold_1 AUGUSTUS start_codon 1957547 1957549 . + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_1 AUGUSTUS CDS 1957547 1958254 0.99 + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_1 AUGUSTUS stop_codon 1958252 1958254 . + 0 transcript_id "g398.t1"; gene_id "g398"; # protein sequence = [MSIFRRNSDTPSFTSFTSPVEIQIVTEVEYHEDEQTADSETQIGTHTAIFSHSSKPPHRCSVTVGSRLSSPSFDSCIH # LERNMALPRSNYDPRRVCLNPFPDLHLDKYKRTVGVYIAGALVRLSRSILPRKIVHLMLQFAIANWTFLDAAVYSAHARVPWGDEPPVHVTFVDWVPG # ICSLLGYLVVNLIDKDRIKGDEGFGDSRAVWRARLFLFIGFALMAGGLAGSVVRVYPHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g398 ### # start gene g399 Scaffold_1 AUGUSTUS gene 1959718 1960534 0.46 - . g399 Scaffold_1 AUGUSTUS transcript 1959718 1960534 0.46 - . g399.t1 Scaffold_1 AUGUSTUS stop_codon 1959718 1959720 . - 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_1 AUGUSTUS CDS 1959718 1959769 0.46 - 1 transcript_id "g399.t1"; gene_id "g399"; Scaffold_1 AUGUSTUS CDS 1959945 1960534 0.46 - 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_1 AUGUSTUS start_codon 1960532 1960534 . - 0 transcript_id "g399.t1"; gene_id "g399"; # protein sequence = [MQLEGPELPHDDHAWDEFSWEDSTNLAGIDRQFLLAFSPTSFYNNTLTSDESDISIPLPVGNPEQILSKMLDGNLFSP # FAGTSNSISNANSLVEFQGSLERLYASYLWNINRLCSPFDSLQPYWEYCGQYWDEPYSSADLVLELPLSTGLTIVFWRAIVSVACSVIMCVAGLCDFG # DSCGSGKEYTTPGSGILKHSPHHFKDGPAGGYLDVDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g399 ### # start gene g400 Scaffold_1 AUGUSTUS gene 1961854 1963443 0.38 + . g400 Scaffold_1 AUGUSTUS transcript 1961854 1963443 0.38 + . g400.t1 Scaffold_1 AUGUSTUS start_codon 1961854 1961856 . + 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_1 AUGUSTUS CDS 1961854 1963443 0.38 + 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_1 AUGUSTUS stop_codon 1963441 1963443 . + 0 transcript_id "g400.t1"; gene_id "g400"; # protein sequence = [MLVDSGACWILFQPPLMTNRKTTSKEGPEESKQKSKFSTSSPLPQLLLDQASRLQYLGLLSGPTAALSSKGYIRPPPV # TRPISRRLCVQSSETRHGSSPWIALRGCYLLKNALPLDDKVIDHLGNYACVSDSPGFMKKLKNAVMKLGPRLKDIQWPSGPDERPFYTPLAQFLNACV # SVCKEELTNDDRYTKGPFHDLEFIVYDKETQDSVDGASPVKPDLVGGKKFMAFADSDDCKVKSARLYWNPPDKNMSPILLPVEVKDNWIELVCQAATY # ARCLFSTSPLRQYSLVLGYNHKEGTFRFLIFHRGAYLPLFPLICVTDSHKSLLHVFLSLLSCSHARDAGIAAWCNERQFKLPVDNSDKPDYVDANVDE # ILHDGNCCRGRVNRVIRISYGVPKDVSTSPLPVATTPLFPVTQLRRSARVANAEAKKGVEAPVISEKSSSNQVDSRTRSETQASNIPDPSTLVITPIA # VYGPTRDLEDVKQELMILVKPLNPCRGETSHGFIKAAWPKRDPGQVVPQSRKRGCSCVW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g400 ### # start gene g401 Scaffold_1 AUGUSTUS gene 1966715 1967248 0.88 - . g401 Scaffold_1 AUGUSTUS transcript 1966715 1967248 0.88 - . g401.t1 Scaffold_1 AUGUSTUS stop_codon 1966715 1966717 . - 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_1 AUGUSTUS CDS 1966715 1967248 0.88 - 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_1 AUGUSTUS start_codon 1967246 1967248 . - 0 transcript_id "g401.t1"; gene_id "g401"; # protein sequence = [MGTHTGTHVDAPCHFIQGGKSIDQIPIDVLHGPALLIDLTHKRAHESISWAEDLSPYAEQMQPGVILLLHTGWSRYWA # KEGQEYFKHPYVEPSVAGKLLEYGIMVIGLDAPNPDVTGSGGHPFHEVFLGGGGYIVENLTNLDKLRSMELMVNLLPINIVGSDGAPVRGVAWDEAEQ # K] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g401 ### # start gene g402 Scaffold_1 AUGUSTUS gene 1976126 1978042 0.82 - . g402 Scaffold_1 AUGUSTUS transcript 1976126 1978042 0.82 - . g402.t1 Scaffold_1 AUGUSTUS stop_codon 1976126 1976128 . - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_1 AUGUSTUS CDS 1976126 1978042 0.82 - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_1 AUGUSTUS start_codon 1978040 1978042 . - 0 transcript_id "g402.t1"; gene_id "g402"; # protein sequence = [MIDIPGLGVGSAATNLIKEDKRTQVNINVANSLTPDGVLDHVGGIKRHEAQPEVELGTAKASSSTTSTTATITATSVL # SLLEDVASDPSISTTRTGSLMEKTRKPLSSRKDASLITEEPRDPHARKDTLALGPSPHLSMEEHLAHIQAPARPPPPSNSTETTAAARNGRPSSTGSL # LRRRSMPTFNVGSPPPPYPSFVLDYPHSQTFAAGPLPPPHPLAQHVRPSPSPHAEEGNERLPAYSNDIFLRAIMPRKVEFVSPGVQAKDRKWRKVVCE # LEGTVFRVYRCPPEFTGTGKVTDWWERKVGVGDMSVGVGVGGYPSTPAGHGGTATIAGATGSMTAEEKLREQERLRQEKIDGERGGRSMVTQIALPPP # TNVHLEVSANGAHSSRTRDRPSSRSTSRSVSRSRQDGDESPPQHRSRLVNIFKAPKSHKRTQSEFLNVPDNHPNSGPSTARSSFNISRSPSRPSFGDS # QESAMNRENSLNSNSNVSNMSATRGMGSTISSSSLSVSIPSSASAISSLISASSNLGTASGLSSAAPTPITSAPSSTFPTNRYPNGVTCPPPNKDDLI # QSFTLQHAESGLGNDYLKRKNVIRVRMEGEQFLLQARDVTAVVDWIEVGNIKSFLLTSQQLAQNHDAWFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g402 ### # start gene g403 Scaffold_1 AUGUSTUS gene 1978096 1979798 0.19 - . g403 Scaffold_1 AUGUSTUS transcript 1978096 1979798 0.19 - . g403.t1 Scaffold_1 AUGUSTUS stop_codon 1978096 1978098 . - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_1 AUGUSTUS CDS 1978096 1979418 0.3 - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_1 AUGUSTUS CDS 1979493 1979798 0.26 - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_1 AUGUSTUS start_codon 1979796 1979798 . - 0 transcript_id "g403.t1"; gene_id "g403"; # protein sequence = [MPTTFTRETRSMDLNLHVAQKPYMSQPVLDIRKRFDNEDHDEGDSTASSAQSMHQPSPSRTDFVKPENLRQQQGKVDG # LPNVNEASQTTSFNSGLPNSNSSTVERQGKQQQERSSIEAQRNEVTDSSSFNKSRRNPELPNTSGSTLSISSSATVTPLSMNSSEKPLPVLIASPKHP # NSSQPLLSSHSPITSPTSTSVISPLASSQNKLSPITSQSSQRPATSPNTPPTTFISSSYPSRRPSAPHLNTAILTTSSSRRPSAPHLNTPLPGQRFNL # LTSDNESASARLSPSIIIRQPALPILNLPKLNLSHATTEADDGNLGPLHSRISASEGTGVAGSSAFARRMSGMASGSNGSPVVESRRISVHAQSRRNL # REMPALPMAGKDQRDNEDDHEDVDGDADSSDDDEDTDVDVEGDGEAEDDDTRSSTESQFHTLPLPPPPPTLPSVLPPVNLTKIDFSFLNFDPKGKQRA # NDDSGKTPTASLQTPRFGSHNDYFRPNTTALLVVAKIANRILVTGRHGFTLLSRERRLRPFLQGHRKLQNSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g403 ### # start gene g404 Scaffold_1 AUGUSTUS gene 1982830 1983090 0.96 + . g404 Scaffold_1 AUGUSTUS transcript 1982830 1983090 0.96 + . g404.t1 Scaffold_1 AUGUSTUS start_codon 1982830 1982832 . + 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_1 AUGUSTUS CDS 1982830 1983090 0.96 + 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_1 AUGUSTUS stop_codon 1983088 1983090 . + 0 transcript_id "g404.t1"; gene_id "g404"; # protein sequence = [MLLASKSISKIKPTGKADLIKEAMNYLRVRWELQQTDEEEKNWAEIQKKMKEAEDAATEEAARAVEATGPEGVAAAKV # LMSMKKKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g404 ### # start gene g405 Scaffold_1 AUGUSTUS gene 2002700 2002987 0.62 + . g405 Scaffold_1 AUGUSTUS transcript 2002700 2002987 0.62 + . g405.t1 Scaffold_1 AUGUSTUS start_codon 2002700 2002702 . + 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_1 AUGUSTUS CDS 2002700 2002721 0.62 + 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_1 AUGUSTUS CDS 2002836 2002987 0.78 + 2 transcript_id "g405.t1"; gene_id "g405"; Scaffold_1 AUGUSTUS stop_codon 2002985 2002987 . + 0 transcript_id "g405.t1"; gene_id "g405"; # protein sequence = [MTRINTAADNDGKDSGDADGVDEHDGDTESDDGIVAIEGFDRSPFDGGGSNEEPAEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g405 ### # start gene g406 Scaffold_1 AUGUSTUS gene 2006484 2006963 1 - . g406 Scaffold_1 AUGUSTUS transcript 2006484 2006963 1 - . g406.t1 Scaffold_1 AUGUSTUS stop_codon 2006484 2006486 . - 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_1 AUGUSTUS CDS 2006484 2006963 1 - 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_1 AUGUSTUS start_codon 2006961 2006963 . - 0 transcript_id "g406.t1"; gene_id "g406"; # protein sequence = [MVRTSLDLGVESGTPAHRDEETELENEFRPARYPTDIKEPIASTGGSSYQATSTFPSEYATTPLRLESPTVTSYRLNN # SHKASMDETRQTESPAYDYRETGTGFRPEKMQTELRYEPQTVSASVSTSYADLDGPSSSRNHHFDHEKLQPLRYSFQNDDA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g406 ### # start gene g407 Scaffold_1 AUGUSTUS gene 2018056 2018547 1 + . g407 Scaffold_1 AUGUSTUS transcript 2018056 2018547 1 + . g407.t1 Scaffold_1 AUGUSTUS start_codon 2018056 2018058 . + 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_1 AUGUSTUS CDS 2018056 2018547 1 + 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_1 AUGUSTUS stop_codon 2018545 2018547 . + 0 transcript_id "g407.t1"; gene_id "g407"; # protein sequence = [MFNSFFQHSDSFPSLTYKHHALGSLTEGRYLVIESSTKNLALSSNDSSLGTSAATNEKINTPSQRFVIHATDPKIATG # KSFRISSAASITDATAISNATTPFLNVNLQFGSVNSSAVFNITYQGSGVYNFLESGSNKFLSLGDNGAPVLGSEAESFKIFSISF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g407 ### # start gene g408 Scaffold_1 AUGUSTUS gene 2024691 2027182 0.3 - . g408 Scaffold_1 AUGUSTUS transcript 2024691 2027182 0.3 - . g408.t1 Scaffold_1 AUGUSTUS stop_codon 2024691 2024693 . - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_1 AUGUSTUS CDS 2024691 2025613 0.97 - 2 transcript_id "g408.t1"; gene_id "g408"; Scaffold_1 AUGUSTUS CDS 2025688 2025732 0.3 - 2 transcript_id "g408.t1"; gene_id "g408"; Scaffold_1 AUGUSTUS CDS 2025853 2027182 0.94 - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_1 AUGUSTUS start_codon 2027180 2027182 . - 0 transcript_id "g408.t1"; gene_id "g408"; # protein sequence = [MYQEVVDQLRNTQDAKTHQEAQFQEERTELKGEIHRLQADVRESGAETAGERDRADRLERELHQVRAQLESESSARRI # LETRLQDHTADADQQRVQLEKALADVTGQTRISEVLRSELAQVRSGFADVKALEERNSNKIKTLLEEQEANLRRLGESQARGDNLEEQIRMARKESQE # VKDALREAAEDKAHLLKAQASEHDRIMRDHIAEADGDRAVLERQFFEVKVQKDHAERQLRDARSQLDVAHADTVGLKEELQRVEHELREANRTESLLR # GDLKSGKSSQSEYELRLEDSERLIAQILNVALAFRTSHIKAMSIAQAIALSAHPNSFKMGQSSSMADSLFSPGMRQNIILNVDEPPPLDPSDPVMTLD # ALRAFDHDLFLEAIAKTGSSVRKWQKQCKEYRERAKGKISFRNFAKGDLALFLPTRNSVSKPWAAFNGKSLSRITSITERVVDRDVRDGVKYYMLEVE # DWTQPVHDKRKVSKKRNSDQKPSLASSTPALPSGPPEPEVEDTFQVAPTTSSHLASRTRSNSSPSNARPSSLSRLLAQASPEVTPQPFPTSENRPNSP # TSSPPPPPSPQLPKLISSPQVNSPQSPLRPGSRASRLSTTSRFSGGRIAPFGSVSSGSSTNKANPTTALSDQNLVSSPSSAGINIKRNDATFPSPGGS # PSDMTSTLKKHFRNRTTSYQNSRPTSMHIPKGSPLTNMETTAASSHAPTRTSASYWNSSWFSRKKADTAHPTTLDESSTTGSVRPSDSAASDILKRFP # F] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g408 ### # start gene g409 Scaffold_1 AUGUSTUS gene 2039711 2040340 0.97 + . g409 Scaffold_1 AUGUSTUS transcript 2039711 2040340 0.97 + . g409.t1 Scaffold_1 AUGUSTUS start_codon 2039711 2039713 . + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_1 AUGUSTUS CDS 2039711 2040340 0.97 + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_1 AUGUSTUS stop_codon 2040338 2040340 . + 0 transcript_id "g409.t1"; gene_id "g409"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTPWVTPNPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g409 ### # start gene g410 Scaffold_1 AUGUSTUS gene 2044679 2045149 0.56 + . g410 Scaffold_1 AUGUSTUS transcript 2044679 2045149 0.56 + . g410.t1 Scaffold_1 AUGUSTUS start_codon 2044679 2044681 . + 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_1 AUGUSTUS CDS 2044679 2045149 0.56 + 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_1 AUGUSTUS stop_codon 2045147 2045149 . + 0 transcript_id "g410.t1"; gene_id "g410"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPTPPEAPQPPPEASQHLQKLNSGSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g410 ### # start gene g411 Scaffold_1 AUGUSTUS gene 2050778 2051296 0.76 - . g411 Scaffold_1 AUGUSTUS transcript 2050778 2051296 0.76 - . g411.t1 Scaffold_1 AUGUSTUS stop_codon 2050778 2050780 . - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_1 AUGUSTUS CDS 2050778 2051296 0.76 - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_1 AUGUSTUS start_codon 2051294 2051296 . - 0 transcript_id "g411.t1"; gene_id "g411"; # protein sequence = [MGWSTTKVEYTYQQTTNLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEFVPIRRSSDTTRA # VTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQFTLFLAPAPSQPKALPIFTTERSSVSMVFLFTLNPTADPSLQLNSCDPFSLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g411 ### # start gene g412 Scaffold_1 AUGUSTUS gene 2055865 2056431 0.96 - . g412 Scaffold_1 AUGUSTUS transcript 2055865 2056431 0.96 - . g412.t1 Scaffold_1 AUGUSTUS stop_codon 2055865 2055867 . - 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_1 AUGUSTUS CDS 2055865 2056431 0.96 - 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_1 AUGUSTUS start_codon 2056429 2056431 . - 0 transcript_id "g412.t1"; gene_id "g412"; # protein sequence = [MVEEELRIAKKDRDAAAEQLSTSSRKIAELTTTLLYQQGIVDESNALATRQRVRLEELQEEVHRSRGRAAFVEQMIQE # YPDEGFYEVVLPPLSELEGELVNIRADLRRVATLAHRLYRSDPATVLHHHDRYIGAIIEAVVAFLRRGLDSDDPDVAAHNFRLAWTTCNRREVFMETS # ICDPSQQSSGSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g412 ### # start gene g413 Scaffold_1 AUGUSTUS gene 2059055 2059548 0.38 - . g413 Scaffold_1 AUGUSTUS transcript 2059055 2059548 0.38 - . g413.t1 Scaffold_1 AUGUSTUS stop_codon 2059055 2059057 . - 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_1 AUGUSTUS CDS 2059055 2059176 0.81 - 2 transcript_id "g413.t1"; gene_id "g413"; Scaffold_1 AUGUSTUS CDS 2059235 2059345 0.81 - 2 transcript_id "g413.t1"; gene_id "g413"; Scaffold_1 AUGUSTUS CDS 2059398 2059548 0.39 - 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_1 AUGUSTUS start_codon 2059546 2059548 . - 0 transcript_id "g413.t1"; gene_id "g413"; # protein sequence = [MAANPIALLAQGPNHQYGRIGLPQNPPQNPPTPAEVIEAVRLANRALRYRDDAAPPTSNEYVSDEAVAACFCYKEAVI # KSGTGVAGAPLWFQQWNQANFVPLVNDVNNIKDDVNNIKDDVNNIKDNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g413 ### # start gene g414 Scaffold_1 AUGUSTUS gene 2060596 2060931 0.45 - . g414 Scaffold_1 AUGUSTUS transcript 2060596 2060931 0.45 - . g414.t1 Scaffold_1 AUGUSTUS stop_codon 2060596 2060598 . - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_1 AUGUSTUS CDS 2060596 2060931 0.45 - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_1 AUGUSTUS start_codon 2060929 2060931 . - 0 transcript_id "g414.t1"; gene_id "g414"; # protein sequence = [MGRITVPPAVVFAANGLCVPPVSTSDTPTPEPYSLTNPPPHWDKVKPIASTLHGGSIKKLQAFFRGGWKELPEDERWW # QEAMGGAVEQQRRQNLQVLDMLRKGMEGAREMR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g414 ### # start gene g415 Scaffold_1 AUGUSTUS gene 2079074 2080001 0.8 - . g415 Scaffold_1 AUGUSTUS transcript 2079074 2080001 0.8 - . g415.t1 Scaffold_1 AUGUSTUS stop_codon 2079074 2079076 . - 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_1 AUGUSTUS CDS 2079074 2079752 0.8 - 1 transcript_id "g415.t1"; gene_id "g415"; Scaffold_1 AUGUSTUS CDS 2079832 2080001 0.81 - 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_1 AUGUSTUS start_codon 2079999 2080001 . - 0 transcript_id "g415.t1"; gene_id "g415"; # protein sequence = [MVHSRAVITTLLAVGTASVLAAPVPESFANVLAARGPEDQPPPGAFGQQPPQGPQGHGQEPQGQYLNFQLFSFTPINL # PISSLCLPGGPPGALSQGPQSPAGSPGFHGPPHLGGQFGIPHSGPEGMRGPGPHPPPGNMFPPGPPGGTQGPPPPHHFKPRDDMPHPPPQGPPGGSGE # LQSPHPSHFGRRQMPGQQGPQGPPPAGQHPQDPAGGPQGMQQGAPPADRAGPGGPQSAHQPFGRRQSPQGPPQDHIIKQQGEQVGHEGHGGQGTIFSS # CGPFLELT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g415 ### # start gene g416 Scaffold_1 AUGUSTUS gene 2084961 2086184 0.72 - . g416 Scaffold_1 AUGUSTUS transcript 2084961 2086184 0.72 - . g416.t1 Scaffold_1 AUGUSTUS stop_codon 2084961 2084963 . - 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_1 AUGUSTUS CDS 2084961 2085428 0.97 - 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_1 AUGUSTUS CDS 2085480 2086184 0.74 - 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_1 AUGUSTUS start_codon 2086182 2086184 . - 0 transcript_id "g416.t1"; gene_id "g416"; # protein sequence = [MRELMFRAEVKAKRVKKIKSKVYRRLKRKEKEAVDRNDDGSEEELTEERRLKLEMERARERATLKHKNTGKWAKKMMS # RGGYGEGGDDDDIRGGRQEIEEMLSRGEKLRRKIQGRGSDDDDSQSESEDDGEDDSGAGVESAFNELRALSKTDADPLESAGKKGKSVFEMKFMKDAM # ARKQADTSRIVDDFVKEMGGDEGHFSDGEVGSTEDDPDSGVIVSRTGGRVVLQPTAKGSEHPTRTFSVASEETSSSTLKSTDFPTPTPPSPLISTSEK # HSSRPALSQPFSSNATTSTSASVNPWLVPSSSSGAGKAGPKKTNEIVVDKDSSQTTKSKHKLKKQNKKTEEEKARVKDDAVVEIEMENVFAVPKISKG # HEEAPATSAVTASKNNIK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g416 ### # start gene g417 Scaffold_1 AUGUSTUS gene 2086721 2087785 0.5 - . g417 Scaffold_1 AUGUSTUS transcript 2086721 2087785 0.5 - . g417.t1 Scaffold_1 AUGUSTUS stop_codon 2086721 2086723 . - 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_1 AUGUSTUS CDS 2086721 2087323 0.5 - 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_1 AUGUSTUS CDS 2087372 2087785 0.5 - 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_1 AUGUSTUS start_codon 2087783 2087785 . - 0 transcript_id "g417.t1"; gene_id "g417"; # protein sequence = [MARSGRTSSNNQSRPTFKNQSFSKRKGSAATAASGYAKRHERKAAKSAGRFEDVYEYAPEKVRRAKIALDLDRDEEMD # AGPLGNGGADDMEDIRMKARLIGENEEDEKIDSEDDEEIDSDAAFDDDDDERFAGFFTKKVLKKKASKQVSVTFADVDLNEDEDDAEPQESERDNGDA # DNEDGEESGEDDEFINVLDILDGRGEPLNDEDNDAPPASFRGNFVSSKEGDEGMEDSADEADEEDEKEVDDEDEVDEDDRISISLSEAEDEADGTLDD # LQTFISSLDPTSSGSRKRKADGEEPEHSRKRRVIKERTEAGVESEFRTQSAGKICSKLPQTLSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g417 ### # start gene g418 Scaffold_1 AUGUSTUS gene 2088821 2089102 0.72 + . g418 Scaffold_1 AUGUSTUS transcript 2088821 2089102 0.72 + . g418.t1 Scaffold_1 AUGUSTUS start_codon 2088821 2088823 . + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_1 AUGUSTUS CDS 2088821 2089102 0.72 + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_1 AUGUSTUS stop_codon 2089100 2089102 . + 0 transcript_id "g418.t1"; gene_id "g418"; # protein sequence = [MSTNSKKGSLIIAGSGIASIRHITLETLSYIENADKVYYIVTDPATEAFIQEKSRGNFADLTIYYDKDKSRYESYVQM # SEVNVGFLFWIVNEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g418 ### # start gene g419 Scaffold_1 AUGUSTUS gene 2089246 2090121 0.56 + . g419 Scaffold_1 AUGUSTUS transcript 2089246 2090121 0.56 + . g419.t1 Scaffold_1 AUGUSTUS start_codon 2089246 2089248 . + 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_1 AUGUSTUS CDS 2089246 2090121 0.56 + 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_1 AUGUSTUS stop_codon 2090119 2090121 . + 0 transcript_id "g419.t1"; gene_id "g419"; # protein sequence = [MLPGISAEDYMFSDLGFDPAIPGCMTQEATSIVIHNKVLDPTIHNIIWQVGSVGVDTMVFDVSGLYNYLQLLSEGLTA # TQNGLFHLLVDHLEKYFGPNDKVIHYIGAVLPQSVTVKDEFTIAELRKERIIKQITTVSTFYVPPREKAPVVQSLPEVLKSRFTTSIVSPIAYGEFEH # NAVSRIANHNIPVDHVELRASAAVRKFMIDLALKPDLQDRYKKDPVAVTNAIPELTAEERFALGLGKPGPVSVIMRATKSDLAAGNFPTSETIADSVG # SDGLNAVTSLTVVVVTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g419 ### # start gene g420 Scaffold_1 AUGUSTUS gene 2110324 2112551 0.06 + . g420 Scaffold_1 AUGUSTUS transcript 2110324 2112551 0.06 + . g420.t1 Scaffold_1 AUGUSTUS start_codon 2110324 2110326 . + 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_1 AUGUSTUS CDS 2110324 2110987 0.07 + 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_1 AUGUSTUS CDS 2111320 2112551 0.22 + 2 transcript_id "g420.t1"; gene_id "g420"; Scaffold_1 AUGUSTUS stop_codon 2112549 2112551 . + 0 transcript_id "g420.t1"; gene_id "g420"; # protein sequence = [MVQCELESVGEFPPEQFDQKGQLHGSDGRFLAQKHSSPRNTEVPELLNPGNTATRSPQLRSGTSPTVHALAQNATPPP # RVNLQTKPLTPVSTQRYQFGEVRMDGAQHSSRISGQDLTARLAPNPVHVPPRLSNPSVIPYQGSVSMQSQAVGTESQRGPNQRRTLAVHEEAVPPQGA # PFGTPFVTGAQMNRPGMAFESARSQESVAMIQQQARVIETLQEQLQGGAYALENEGGGKGGFNPPPRVPPPHFSSQSRDRERPLSQGGQGQREQGGRS # GGGAPPPPPPPPPPSGGPGDSNSEGSNEGEQNQSSRNGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNR # ITIESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEA # DEARRRLAWMKQMPEESFANFFIRFNEYAPLTGFNDEALVTYLKKGVAPWLPLQVVTGREEPRSYDEWTRVFTKLDGAVRAQAESLRNLHGEKLQGWL # SRFPGLELAPEAPYKSPLRREREPADVWTSNPKPAATGRFQTGPTGKRDDKGVCSLGGRRKLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g420 ### # start gene g421 Scaffold_1 AUGUSTUS gene 2114794 2116169 0.75 + . g421 Scaffold_1 AUGUSTUS transcript 2114794 2116169 0.75 + . g421.t1 Scaffold_1 AUGUSTUS start_codon 2114794 2114796 . + 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_1 AUGUSTUS CDS 2114794 2115412 0.75 + 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_1 AUGUSTUS CDS 2115499 2116169 0.91 + 2 transcript_id "g421.t1"; gene_id "g421"; Scaffold_1 AUGUSTUS stop_codon 2116167 2116169 . + 0 transcript_id "g421.t1"; gene_id "g421"; # protein sequence = [MLRANDSSATEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYD # IKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTLRLCVDYRALNKITKKNRYPLPLIGTLVDQLRKAKIFT # KIDLRAGYNNVRVAQGHEWKTAFRTRMLPPHDKVSHVEHVRKVLERLRANHLHAKPEKCAFYVDTVEYLGVIISPLGVSMDPEKVKAVMDWPKPRTVK # ELQAFLGFANFYRRFIDNYSGITKVFTKLLRKDSVWNWTPQCSSAFELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAF # HARSMISAELNYDIYDKELLAIVDCFKQWRAYCEGSDTRSKYTQTITISSTSPLRSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g421 ### # start gene g422 Scaffold_1 AUGUSTUS gene 2124789 2125130 0.98 + . g422 Scaffold_1 AUGUSTUS transcript 2124789 2125130 0.98 + . g422.t1 Scaffold_1 AUGUSTUS start_codon 2124789 2124791 . + 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_1 AUGUSTUS CDS 2124789 2125130 0.98 + 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_1 AUGUSTUS stop_codon 2125128 2125130 . + 0 transcript_id "g422.t1"; gene_id "g422"; # protein sequence = [MPVLSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGEITSDEVKVRLALEWTSYKTRQALRVF # DSVKTPNWDQFKKDLKNMFPQSEETKEDLDYCLNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g422 ### # start gene g423 Scaffold_1 AUGUSTUS gene 2125337 2125745 0.52 + . g423 Scaffold_1 AUGUSTUS transcript 2125337 2125745 0.52 + . g423.t1 Scaffold_1 AUGUSTUS start_codon 2125337 2125339 . + 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_1 AUGUSTUS CDS 2125337 2125398 0.52 + 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_1 AUGUSTUS CDS 2125487 2125745 0.99 + 1 transcript_id "g423.t1"; gene_id "g423"; Scaffold_1 AUGUSTUS stop_codon 2125743 2125745 . + 0 transcript_id "g423.t1"; gene_id "g423"; # protein sequence = [MSDRRKEDPFKIDEVMNAAENRGHINLLFAADVPKTDRNYLQALKPKVEDEFKDLLGVKLESLIPRELTEEQQQMVAL # NKDLMEANMKEIRAVKSLQSHFKEEQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g423 ### # start gene g424 Scaffold_1 AUGUSTUS gene 2126294 2127308 0.73 + . g424 Scaffold_1 AUGUSTUS transcript 2126294 2127308 0.73 + . g424.t1 Scaffold_1 AUGUSTUS start_codon 2126294 2126296 . + 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_1 AUGUSTUS CDS 2126294 2126660 0.74 + 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_1 AUGUSTUS CDS 2126704 2127308 0.94 + 2 transcript_id "g424.t1"; gene_id "g424"; Scaffold_1 AUGUSTUS stop_codon 2127306 2127308 . + 0 transcript_id "g424.t1"; gene_id "g424"; # protein sequence = [MKEQDRSMRNLRSNAVAPGKVRKQNEINLMKTRKLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKK # PSVTIEDVDESDGEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYHNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELAALSPAIRKI # IMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQADMFEVLTESHNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIV # ANQSVAYEDHSDQPVVVAINPMDYMLLLLKSIIKMKRLKVYWTKVHKLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g424 ### # start gene g425 Scaffold_1 AUGUSTUS gene 2129668 2130003 1 - . g425 Scaffold_1 AUGUSTUS transcript 2129668 2130003 1 - . g425.t1 Scaffold_1 AUGUSTUS stop_codon 2129668 2129670 . - 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_1 AUGUSTUS CDS 2129668 2130003 1 - 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_1 AUGUSTUS start_codon 2130001 2130003 . - 0 transcript_id "g425.t1"; gene_id "g425"; # protein sequence = [MDIQARIPSALIAIHNFILEHDQADLDRWILDEQVEDPLPGQRRQQEIDFGSLATSEKISRAEKRRAEIAQDRLANEM # WENYLSILEEYHKQGGVDAMDVDEDEMEIAPLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g425 ### # start gene g426 Scaffold_1 AUGUSTUS gene 2131323 2132702 0.97 + . g426 Scaffold_1 AUGUSTUS transcript 2131323 2132702 0.97 + . g426.t1 Scaffold_1 AUGUSTUS start_codon 2131323 2131325 . + 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_1 AUGUSTUS CDS 2131323 2132702 0.97 + 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_1 AUGUSTUS stop_codon 2132700 2132702 . + 0 transcript_id "g426.t1"; gene_id "g426"; # protein sequence = [MFSKKELSEAYVLASREHLKSQDDRAEEIIDCYLNQKTIGDKQVFCVWRDGVLGKLDDQLNNDQFNLNPIKSFFLQNG # RIKPKPIQRKVQKRRFVEPVLQNFSLGENCNKSESTETTQNQCNNENISETIRDDNWNKPKNSQRTRKRMVRYEVLKRGTESFQRSQPSFEKVRYELR # QRKKGKAQDSKDKKENVQPDLLNEPPTNKLEERIKLNQQDRSPINLIDETNKQVVNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIER # HIHGDPLVELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWQPSEAGTFKNESFPPVKVPVIPHEPWVERNIPIP # PGIFEDVCKIIKSKIDSGIYEPLNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGKILWRNLRFIRWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g426 ### # start gene g427 Scaffold_1 AUGUSTUS gene 2133205 2133720 0.5 + . g427 Scaffold_1 AUGUSTUS transcript 2133205 2133720 0.5 + . g427.t1 Scaffold_1 AUGUSTUS start_codon 2133205 2133207 . + 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_1 AUGUSTUS CDS 2133205 2133720 0.5 + 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_1 AUGUSTUS stop_codon 2133718 2133720 . + 0 transcript_id "g427.t1"; gene_id "g427"; # protein sequence = [MFIVNFAKKAAPLTKLTSKVPFEWNEKCDKAMDELKDGIQECPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPSEKK # KFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTFNPCKRCNSWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g427 ### # start gene g428 Scaffold_1 AUGUSTUS gene 2133792 2135462 0.23 + . g428 Scaffold_1 AUGUSTUS transcript 2133792 2135462 0.23 + . g428.t1 Scaffold_1 AUGUSTUS start_codon 2133792 2133794 . + 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_1 AUGUSTUS CDS 2133792 2134035 0.43 + 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_1 AUGUSTUS CDS 2134284 2134331 0.49 + 2 transcript_id "g428.t1"; gene_id "g428"; Scaffold_1 AUGUSTUS CDS 2134630 2135462 0.96 + 2 transcript_id "g428.t1"; gene_id "g428"; Scaffold_1 AUGUSTUS stop_codon 2135460 2135462 . + 0 transcript_id "g428.t1"; gene_id "g428"; # protein sequence = [MDGGEPINFIMGDGETEELYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNYMLESKTRHVKFS # VGILVEKEKRMHMLNSAHDXEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFY # FLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKD # WDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDD # IG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g428 ### # start gene g429 Scaffold_1 AUGUSTUS gene 2136408 2137186 0.51 - . g429 Scaffold_1 AUGUSTUS transcript 2136408 2137186 0.51 - . g429.t1 Scaffold_1 AUGUSTUS stop_codon 2136408 2136410 . - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_1 AUGUSTUS CDS 2136408 2136835 0.94 - 2 transcript_id "g429.t1"; gene_id "g429"; Scaffold_1 AUGUSTUS CDS 2136918 2137042 0.84 - 1 transcript_id "g429.t1"; gene_id "g429"; Scaffold_1 AUGUSTUS CDS 2137164 2137186 0.51 - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_1 AUGUSTUS start_codon 2137184 2137186 . - 0 transcript_id "g429.t1"; gene_id "g429"; # protein sequence = [MNSASEDNTPYPTTGSNKGSNKDEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQ # STKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADKACSILKSHQDSGSDSSGSDASIATAQSIPTTSSEDTVVTPTEIAVPVLKTVERATTPFT # RGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g429 ### # start gene g430 Scaffold_1 AUGUSTUS gene 2144142 2144546 1 + . g430 Scaffold_1 AUGUSTUS transcript 2144142 2144546 1 + . g430.t1 Scaffold_1 AUGUSTUS start_codon 2144142 2144144 . + 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_1 AUGUSTUS CDS 2144142 2144546 1 + 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_1 AUGUSTUS stop_codon 2144544 2144546 . + 0 transcript_id "g430.t1"; gene_id "g430"; # protein sequence = [MSEVGESSVSAGSETWDVDDAGQVKFKSKHLKELSFESISRRDWDSILKNMPQALMDYFIPPGECGIHSKLAIEIAQL # FKRFFCAGTTTQRDLPLRPTTDPKFEEYPTTGYTSRSHKEQNTMFLYSQVPGLNSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g430 ### # start gene g431 Scaffold_1 AUGUSTUS gene 2148434 2149096 0.61 - . g431 Scaffold_1 AUGUSTUS transcript 2148434 2149096 0.61 - . g431.t1 Scaffold_1 AUGUSTUS stop_codon 2148434 2148436 . - 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_1 AUGUSTUS CDS 2148434 2149096 0.61 - 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_1 AUGUSTUS start_codon 2149094 2149096 . - 0 transcript_id "g431.t1"; gene_id "g431"; # protein sequence = [MSPSELTYGYLPLFNIPVSQCSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAED # INLQLSSEKLGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNPINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVK # WKGYDAGHNSWEPAPNLSRAPKIVRAFHKNIRQRQNLDHRGQWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g431 ### # start gene g432 Scaffold_1 AUGUSTUS gene 2151448 2152225 0.3 + . g432 Scaffold_1 AUGUSTUS transcript 2151448 2152225 0.3 + . g432.t1 Scaffold_1 AUGUSTUS start_codon 2151448 2151450 . + 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_1 AUGUSTUS CDS 2151448 2151470 0.34 + 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_1 AUGUSTUS CDS 2151592 2151716 0.6 + 1 transcript_id "g432.t1"; gene_id "g432"; Scaffold_1 AUGUSTUS CDS 2151798 2152225 1 + 2 transcript_id "g432.t1"; gene_id "g432"; Scaffold_1 AUGUSTUS stop_codon 2152223 2152225 . + 0 transcript_id "g432.t1"; gene_id "g432"; # protein sequence = [MNSASKDNTPYPTTGSNKGSNKDEKSAVNDVSPRLSKVHGRSDSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQ # STKFIAATLNFQAAEFEFNANLVKTYATCAHIAKVIADEACSILKSRQDSGSDSSGSDASFATAQSIPTTGSEDTVVTPTEIAVPVLKTVERVTPPFT # RGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g432 ### # start gene g433 Scaffold_1 AUGUSTUS gene 2152486 2153334 0.67 - . g433 Scaffold_1 AUGUSTUS transcript 2152486 2153334 0.67 - . g433.t1 Scaffold_1 AUGUSTUS stop_codon 2152486 2152488 . - 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_1 AUGUSTUS CDS 2152486 2152797 0.89 - 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_1 AUGUSTUS CDS 2152950 2153034 0.77 - 1 transcript_id "g433.t1"; gene_id "g433"; Scaffold_1 AUGUSTUS CDS 2153123 2153334 0.86 - 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_1 AUGUSTUS start_codon 2153332 2153334 . - 0 transcript_id "g433.t1"; gene_id "g433"; # protein sequence = [MLAWLEEKYEIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVSNTKMWSRLILTRDEL # IGYRAQALSKHNSFIEKVRRRRTYGCEKRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHKLINLTAEQLDLMVEDEDEYWMTPEND # YIFNAIPHLRLSDTNSDKELSEEEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g433 ### # start gene g434 Scaffold_1 AUGUSTUS gene 2154320 2155912 0.81 - . g434 Scaffold_1 AUGUSTUS transcript 2154320 2155912 0.81 - . g434.t1 Scaffold_1 AUGUSTUS stop_codon 2154320 2154322 . - 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_1 AUGUSTUS CDS 2154320 2155912 0.81 - 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_1 AUGUSTUS start_codon 2155910 2155912 . - 0 transcript_id "g434.t1"; gene_id "g434"; # protein sequence = [MTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRF # VWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSN # VPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHV # YGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEP # YQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKSATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGK # YLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRNTDQPDQPQLVVERKAYAHVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g434 ### # start gene g435 Scaffold_1 AUGUSTUS gene 2156260 2158849 0.47 - . g435 Scaffold_1 AUGUSTUS transcript 2156260 2158849 0.47 - . g435.t1 Scaffold_1 AUGUSTUS stop_codon 2156260 2156262 . - 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_1 AUGUSTUS CDS 2156260 2157010 1 - 1 transcript_id "g435.t1"; gene_id "g435"; Scaffold_1 AUGUSTUS CDS 2157103 2157343 0.49 - 2 transcript_id "g435.t1"; gene_id "g435"; Scaffold_1 AUGUSTUS CDS 2157418 2158849 0.9 - 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_1 AUGUSTUS start_codon 2158847 2158849 . - 0 transcript_id "g435.t1"; gene_id "g435"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSID # DERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIP # FKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDSK # GNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSLGENCDKSES # TETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIK # LNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVEKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDK # NHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGPLKMNSFHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g435 ### # start gene g436 Scaffold_1 AUGUSTUS gene 2158879 2160405 0.88 - . g436 Scaffold_1 AUGUSTUS transcript 2158879 2160405 0.88 - . g436.t1 Scaffold_1 AUGUSTUS stop_codon 2158879 2158881 . - 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_1 AUGUSTUS CDS 2158879 2160405 0.88 - 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_1 AUGUSTUS start_codon 2160403 2160405 . - 0 transcript_id "g436.t1"; gene_id "g436"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKD # LLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNG # TQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVN # LAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g436 ### # start gene g437 Scaffold_1 AUGUSTUS gene 2162850 2163218 0.3 + . g437 Scaffold_1 AUGUSTUS transcript 2162850 2163218 0.3 + . g437.t1 Scaffold_1 AUGUSTUS start_codon 2162850 2162852 . + 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_1 AUGUSTUS CDS 2162850 2163218 0.3 + 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_1 AUGUSTUS stop_codon 2163216 2163218 . + 0 transcript_id "g437.t1"; gene_id "g437"; # protein sequence = [MKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPLNQSNRFERNMTPRSSNGTQWACFLCKLTD # HFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g437 ### # start gene g438 Scaffold_1 AUGUSTUS gene 2165712 2166771 0.66 - . g438 Scaffold_1 AUGUSTUS transcript 2165712 2166771 0.66 - . g438.t1 Scaffold_1 AUGUSTUS stop_codon 2165712 2165714 . - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_1 AUGUSTUS CDS 2165712 2166088 0.93 - 2 transcript_id "g438.t1"; gene_id "g438"; Scaffold_1 AUGUSTUS CDS 2166393 2166771 0.66 - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_1 AUGUSTUS start_codon 2166769 2166771 . - 0 transcript_id "g438.t1"; gene_id "g438"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDRSSKTAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFPGSRKA # LSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEKYLGPFKVIIDLVLCLMSSSSQTTSPHSSGFPRLTAGAGYAESIPESYQ # SPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g438 ### # start gene g439 Scaffold_1 AUGUSTUS gene 2173709 2174344 0.42 + . g439 Scaffold_1 AUGUSTUS transcript 2173709 2174344 0.42 + . g439.t1 Scaffold_1 AUGUSTUS start_codon 2173709 2173711 . + 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_1 AUGUSTUS CDS 2173709 2173725 0.48 + 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_1 AUGUSTUS CDS 2173894 2174344 0.59 + 1 transcript_id "g439.t1"; gene_id "g439"; Scaffold_1 AUGUSTUS stop_codon 2174342 2174344 . + 0 transcript_id "g439.t1"; gene_id "g439"; # protein sequence = [MEIRKQTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDGKVDLSNRRISSFITCYQKDY # YANQLTRKVNPIKATLPDEFRIERHIHGDLLMELPELSKHPKPFVPTGRYTEERKEMIDRIILKDFCGNKREILCTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g439 ### # start gene g440 Scaffold_1 AUGUSTUS gene 2175234 2176118 0.41 + . g440 Scaffold_1 AUGUSTUS transcript 2175234 2176118 0.41 + . g440.t1 Scaffold_1 AUGUSTUS start_codon 2175234 2175236 . + 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_1 AUGUSTUS CDS 2175234 2175465 0.44 + 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_1 AUGUSTUS CDS 2175604 2176118 0.78 + 2 transcript_id "g440.t1"; gene_id "g440"; Scaffold_1 AUGUSTUS stop_codon 2176116 2176118 . + 0 transcript_id "g440.t1"; gene_id "g440"; # protein sequence = [MFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDLEKRI # ETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGERKSRINLMNFKD # QIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQKSVPRST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g440 ### # start gene g441 Scaffold_1 AUGUSTUS gene 2177342 2177593 0.73 + . g441 Scaffold_1 AUGUSTUS transcript 2177342 2177593 0.73 + . g441.t1 Scaffold_1 AUGUSTUS start_codon 2177342 2177344 . + 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_1 AUGUSTUS CDS 2177342 2177593 0.73 + 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_1 AUGUSTUS stop_codon 2177591 2177593 . + 0 transcript_id "g441.t1"; gene_id "g441"; # protein sequence = [MESTQEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTNSDEELS # EGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g441 ### # start gene g442 Scaffold_1 AUGUSTUS gene 2177932 2179134 0.23 - . g442 Scaffold_1 AUGUSTUS transcript 2177932 2179134 0.23 - . g442.t1 Scaffold_1 AUGUSTUS stop_codon 2177932 2177934 . - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS CDS 2177932 2178278 0.99 - 2 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS CDS 2178355 2178490 0.5 - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS CDS 2178596 2178622 0.3 - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS CDS 2178716 2178860 0.69 - 1 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS CDS 2179124 2179134 0.76 - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_1 AUGUSTUS start_codon 2179132 2179134 . - 0 transcript_id "g442.t1"; gene_id "g442"; # protein sequence = [MISCLSEHFRSGIAPDRARSVHSDHELSTRSDNSRSYQEVQKKATRFASSRDMNSASEDELNRRSTPYPTTGSNKGSN # KDEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEAC # SILKSRQDSGSDSSASDASFATAQSIPPLVLRTPSLLLQRCCSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g442 ### # start gene g443 Scaffold_1 AUGUSTUS gene 2189011 2190168 0.97 + . g443 Scaffold_1 AUGUSTUS transcript 2189011 2190168 0.97 + . g443.t1 Scaffold_1 AUGUSTUS start_codon 2189011 2189013 . + 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_1 AUGUSTUS CDS 2189011 2190168 0.97 + 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_1 AUGUSTUS stop_codon 2190166 2190168 . + 0 transcript_id "g443.t1"; gene_id "g443"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVK # QNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQPRRQQISATAAPFTLFPNESVQIAASIPTPVAGPATPSPANQDFSTQIGQIRELLDRAN # AMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g443 ### # start gene g444 Scaffold_1 AUGUSTUS gene 2190866 2192080 0.93 + . g444 Scaffold_1 AUGUSTUS transcript 2190866 2192080 0.93 + . g444.t1 Scaffold_1 AUGUSTUS start_codon 2190866 2190868 . + 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_1 AUGUSTUS CDS 2190866 2192080 0.93 + 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_1 AUGUSTUS stop_codon 2192078 2192080 . + 0 transcript_id "g444.t1"; gene_id "g444"; # protein sequence = [MGESGDIGRTNRGSMVLSRVHYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGA # PATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGY # NNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVREVLTRLEKHDLYLRPEKCEFE # QQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQQEAFDTLREAFISAPILALW # APDRPTRIEVDASGFATGGALMQKQDDGQWHP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g444 ### # start gene g445 Scaffold_1 AUGUSTUS gene 2200614 2203342 0.3 - . g445 Scaffold_1 AUGUSTUS transcript 2200614 2203342 0.3 - . g445.t1 Scaffold_1 AUGUSTUS stop_codon 2200614 2200616 . - 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_1 AUGUSTUS CDS 2200614 2201124 0.87 - 1 transcript_id "g445.t1"; gene_id "g445"; Scaffold_1 AUGUSTUS CDS 2202166 2202244 0.65 - 2 transcript_id "g445.t1"; gene_id "g445"; Scaffold_1 AUGUSTUS CDS 2203216 2203342 0.3 - 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_1 AUGUSTUS start_codon 2203340 2203342 . - 0 transcript_id "g445.t1"; gene_id "g445"; # protein sequence = [MSVFRKRFSVLIKEINGQSCTYYKSHMILNVSILVTGSVGDVCAVGVARGSVAFVTDTSNEGRAYAILGSRPSVSGSS # IRPAIGSTRQQPFGSPRRPSVPSRAIPIRQSSYSSMSDYGTPTSRRFSNVPSIFSHPGVRTPIAVLDAQQLLLRDEEVVPADINENENLEPILESRRA # STIVPDENEVLHEKPPSLSSQIPILVIIQYGLLALHSTTHDQIFMSYLVTWVMSAFHEVDRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g445 ### # start gene g446 Scaffold_1 AUGUSTUS gene 2210270 2210741 0.25 - . g446 Scaffold_1 AUGUSTUS transcript 2210270 2210741 0.25 - . g446.t1 Scaffold_1 AUGUSTUS stop_codon 2210270 2210272 . - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_1 AUGUSTUS CDS 2210270 2210568 0.82 - 2 transcript_id "g446.t1"; gene_id "g446"; Scaffold_1 AUGUSTUS CDS 2210636 2210741 0.25 - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_1 AUGUSTUS start_codon 2210739 2210741 . - 0 transcript_id "g446.t1"; gene_id "g446"; # protein sequence = [MYTASKHAVLGLMRSLDASFVSRGLRITSIHPFFAATSMVPNVIRLQLAGIPLAPVPRIARTILYAATQSDPACSGAA # FWVPDGGALVFMVSREEFKPGVYDDIDRSSNATSVYVFMLSTSISNNCLTSLISEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g446 ### # start gene g447 Scaffold_1 AUGUSTUS gene 2214062 2214865 0.27 + . g447 Scaffold_1 AUGUSTUS transcript 2214062 2214865 0.27 + . g447.t1 Scaffold_1 AUGUSTUS start_codon 2214062 2214064 . + 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_1 AUGUSTUS CDS 2214062 2214077 0.63 + 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_1 AUGUSTUS CDS 2214198 2214381 0.43 + 2 transcript_id "g447.t1"; gene_id "g447"; Scaffold_1 AUGUSTUS CDS 2214435 2214613 0.63 + 1 transcript_id "g447.t1"; gene_id "g447"; Scaffold_1 AUGUSTUS CDS 2214678 2214865 1 + 2 transcript_id "g447.t1"; gene_id "g447"; Scaffold_1 AUGUSTUS stop_codon 2214863 2214865 . + 0 transcript_id "g447.t1"; gene_id "g447"; # protein sequence = [MRKGFKEDEIQEMSIDLGMLDKLKARVQLARKIETTHHKSKKAKHERTWMKETAEAMEIELDSDFASDSDGDNPNKRQ # RKADQATAAALKAQLKQMLAQPLIARGISAKYITSGSNHIVDELISGEYNEKMLGVGVNDAGSDLGKAKRKKRVPKAEDSKGLAKDVSEVEWMGIDID # HAMSTNTKFGPF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g447 ### # start gene g448 Scaffold_1 AUGUSTUS gene 2221530 2222245 0.24 + . g448 Scaffold_1 AUGUSTUS transcript 2221530 2222245 0.24 + . g448.t1 Scaffold_1 AUGUSTUS start_codon 2221530 2221532 . + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_1 AUGUSTUS CDS 2221530 2221685 0.87 + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_1 AUGUSTUS CDS 2221805 2222245 0.26 + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_1 AUGUSTUS stop_codon 2222243 2222245 . + 0 transcript_id "g448.t1"; gene_id "g448"; # protein sequence = [MYTQETEVGKKSQNYAASDEESFVGTVDSGQNEQMENAEDSPSSEDDNPNPWAKKPVPLAMATIGKAERNTRAQKNET # RRQTRSDKHNSTHKNLSDNSWNEEGLFKKRKCMDPMNWGASEPDTDINQHGAIENFRAVRDNAQQQQMPKKKSSKNLNGLSCMKFLKHLLTKSNPASG # TLWGSTHENLMLSNELRAQVAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g448 ### # start gene g449 Scaffold_1 AUGUSTUS gene 2223537 2224499 0.5 + . g449 Scaffold_1 AUGUSTUS transcript 2223537 2224499 0.5 + . g449.t1 Scaffold_1 AUGUSTUS start_codon 2223537 2223539 . + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_1 AUGUSTUS CDS 2223537 2224499 0.5 + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_1 AUGUSTUS stop_codon 2224497 2224499 . + 0 transcript_id "g449.t1"; gene_id "g449"; # protein sequence = [MAPTSRKRHTKKRKPTPGIDFALEDLPERHQHIIDTNFLPTKNGGYEHLTSLKRVRNNKILIKPYDGYTHFVTVSDVR # TCLDFDRILRKRSFRLQMADIPAIYPLLAEHVNSDPLIHPYQLATFNVDTGIVYTQAPPIDRRLFDPFTREDDLRINGLDKLTTEGRGLHRELQKKHW # TEKHVERKDWKKGYQTKVSMREEASSPGSSHEARDPSGSFVHPSTPRDSTISTASKTASHTDQTHLPHPTHTSFEVSYSPTIISSSPNPSLLIDALAT # EETPVLTNEPTHNSCTQSFDNDLLDPRVGLRPDRSRYPRRRRSSSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g449 ### # start gene g450 Scaffold_1 AUGUSTUS gene 2226583 2226972 0.39 + . g450 Scaffold_1 AUGUSTUS transcript 2226583 2226972 0.39 + . g450.t1 Scaffold_1 AUGUSTUS start_codon 2226583 2226585 . + 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_1 AUGUSTUS CDS 2226583 2226972 0.39 + 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_1 AUGUSTUS stop_codon 2226970 2226972 . + 0 transcript_id "g450.t1"; gene_id "g450"; # protein sequence = [MGHDTVNYVAEHLSTKVQDRLNNAFPKLDPDSVTSVLTEVITTFDDSLLVDLLSGIPSESQLSSLTEDEVPNILGGDH # RSKVLRSMQGTTVIIALTNPDNEDLWVASLGDSYAGKCNPLILDFFINESG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g450 ### # start gene g451 Scaffold_1 AUGUSTUS gene 2235737 2236651 0.48 + . g451 Scaffold_1 AUGUSTUS transcript 2235737 2236651 0.48 + . g451.t1 Scaffold_1 AUGUSTUS start_codon 2235737 2235739 . + 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_1 AUGUSTUS CDS 2235737 2236651 0.48 + 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_1 AUGUSTUS stop_codon 2236649 2236651 . + 0 transcript_id "g451.t1"; gene_id "g451"; # protein sequence = [MPAPSGPMKIPSYTVPITTFDAIQTLKLLGPFDYYPGLSHVQLDLTHFVSFYDTTLAPSLIAVRSGKPRLAHRLLGID # EDDIVRVRKYLEEQIAETPWSSLQPEAVEHGIDWPAYLHSIISLYGKPLEDIWVIINSTWPQSDVQPNNQDTQVKTAFQLIEYTVQRFILYSVSPVGN # ASDFAWASPVYKECALSHTSSISTTSRTKSEALLRNAVEGTTRELCRALTKMWAMGVHEGLSSLFDSPTSSAHPLVRNAVLDAWKLELGNLIQWLDWN # VWIRCKPACGEQVNMKARWTLTNLCSISIF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g451 ### # start gene g452 Scaffold_1 AUGUSTUS gene 2260648 2260941 0.91 + . g452 Scaffold_1 AUGUSTUS transcript 2260648 2260941 0.91 + . g452.t1 Scaffold_1 AUGUSTUS start_codon 2260648 2260650 . + 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_1 AUGUSTUS CDS 2260648 2260941 0.91 + 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_1 AUGUSTUS stop_codon 2260939 2260941 . + 0 transcript_id "g452.t1"; gene_id "g452"; # protein sequence = [MLIEKALRHSKKVGRLHVDEGAFTVVDKVDCDPGRVGSTQLRHDMDLDDLRRWGSAHNSYGIKKEYVEYTHRQRCSAD # RRDESEEETDEDRADTHDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g452 ### # start gene g453 Scaffold_1 AUGUSTUS gene 2272003 2272758 0.8 - . g453 Scaffold_1 AUGUSTUS transcript 2272003 2272758 0.8 - . g453.t1 Scaffold_1 AUGUSTUS stop_codon 2272003 2272005 . - 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_1 AUGUSTUS CDS 2272003 2272758 0.8 - 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_1 AUGUSTUS start_codon 2272756 2272758 . - 0 transcript_id "g453.t1"; gene_id "g453"; # protein sequence = [MGLPRALLMGIFEAGFERPSPIQEAAIPTALSGRDILARAKNGTGKTAAFIIPLLSKINVSKPYIQGIVLVPTRELAL # QIASVTKMLSKHMGVEVMVTTGGTTLKDDILRLQQPVHVLVGTPGRILDLAGKGVADLGKGCRVFVMDEADKLLSPEFGPVMESLLGYLPKSKEAPEA # EGSGRQVMLFSATFPMIVKDFKASMTYLLAFQFCLLVHRTNTCKTRTKSTLWMSLLLKVSPNTTPTSKKDKRFIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g453 ### # start gene g454 Scaffold_1 AUGUSTUS gene 2273974 2274420 0.61 + . g454 Scaffold_1 AUGUSTUS transcript 2273974 2274420 0.61 + . g454.t1 Scaffold_1 AUGUSTUS start_codon 2273974 2273976 . + 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_1 AUGUSTUS CDS 2273974 2274420 0.61 + 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_1 AUGUSTUS stop_codon 2274418 2274420 . + 0 transcript_id "g454.t1"; gene_id "g454"; # protein sequence = [MKNLRNKPYFPMGSGVPRVGGQMPRPNDASGDPQSSGSNKHARRDTFNARDAGSATSGSEGFPLISSTKTPPESAFAR # DGSNPSTGPHTGGTTNDNPKNPVRSASSSDLSLSSSSGSPAASNAGPTDPAESVLPYCGHLIRSYGEDLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g454 ### # start gene g455 Scaffold_1 AUGUSTUS gene 2280618 2281385 1 - . g455 Scaffold_1 AUGUSTUS transcript 2280618 2281385 1 - . g455.t1 Scaffold_1 AUGUSTUS stop_codon 2280618 2280620 . - 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_1 AUGUSTUS CDS 2280618 2281385 1 - 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_1 AUGUSTUS start_codon 2281383 2281385 . - 0 transcript_id "g455.t1"; gene_id "g455"; # protein sequence = [MATLGYAYCVLHDIYFADHNDRDRHIQSSDDHPQCHICDRRFKDRNALRNVSFYLSKIKHLPDRLFYFQHWIVAKHHY # YCADCDKHFNTAAGLEYHIDEIHVGGDDSDDEDECSDESEHYDGWEDDRGMDRYPDGVPAESQAHKLGVNDDNSWEIWDDLDFEDQEDLMDPSEPSLD # DYAPNSDDEVDEDDEEHLSHHFECPMCEEKDCGTICTTLCGHIFCAPCIIGAYKYTEACPICDEIGEVSELRRIYISEQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g455 ### # start gene g456 Scaffold_1 AUGUSTUS gene 2288078 2289032 0.46 + . g456 Scaffold_1 AUGUSTUS transcript 2288078 2289032 0.46 + . g456.t1 Scaffold_1 AUGUSTUS start_codon 2288078 2288080 . + 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_1 AUGUSTUS CDS 2288078 2288470 0.49 + 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_1 AUGUSTUS CDS 2288553 2289032 0.61 + 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_1 AUGUSTUS stop_codon 2289030 2289032 . + 0 transcript_id "g456.t1"; gene_id "g456"; # protein sequence = [MPNVYSSMLDDTVTYAKWKPCGNGMPGTMSCGKITVETLEAAKRDLRIFLTNNRKLAASDYALRCLNVWEDPRVSNWI # DQNREKFSALSFDELFIAVRDRVLEPDWQDSTFRKMRAVCMPDDLSTSASDLAAQLQNTGRLPPLTTNERRLLSENEGCFKCRSFFVKCRTSSTEHEF # PLPIGNGYKELTVADVTAARKLRGMNPDSNKKPRTAAIASIGVTDDGDDDDVMASIMPSAVLGDGTDSEEEVSCPFRVHHLRWKCHVSGPKSVFPVRV # NSLIDNVLTLLLFTQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g456 ### # start gene g457 Scaffold_1 AUGUSTUS gene 2290196 2291622 0.41 + . g457 Scaffold_1 AUGUSTUS transcript 2290196 2291622 0.41 + . g457.t1 Scaffold_1 AUGUSTUS start_codon 2290196 2290198 . + 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_1 AUGUSTUS CDS 2290196 2290640 0.41 + 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_1 AUGUSTUS CDS 2290742 2291622 0.88 + 2 transcript_id "g457.t1"; gene_id "g457"; Scaffold_1 AUGUSTUS stop_codon 2291620 2291622 . + 0 transcript_id "g457.t1"; gene_id "g457"; # protein sequence = [MLKRFYSHSASPVYIATQISVICSLNVHFLGHTISADGIAADDKKVDRIMDWPTPKMLKELQAFLGLVRYVAAFLPRL # AELTEILTALTANVVDKNHLPWEACHQNAFEAVKLLVSSRECLTVIDHDKLDTHKIFVTTDASNCSGAVLTIIRALKKWRVDLLGVPFIIMTDHRTLE # NFHSQPDLSRRQARWMEFFSQFDCKIVYVKGERNTVADALSRRTDLLDPVKCHPYLDASADAIPTSRHPYAYCADSDDDLDLPILCVLPDSCWSTARM # LALRDPPDPPSPIATTLEISSDPTLLDDIRNGYTTDAWCKDLPSMASSMPLIRHDKTSKLWYIGNRLIIPRVGHIREELFRLAHDNLGHFGFDKSYAA # LRECYYWPHMRRDLSKAYIPACDECQRNKSTTQKKAGPLHPLPIPDRRFSSVAMDLLGPYPKMEVPTAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g457 ### # start gene g458 Scaffold_1 AUGUSTUS gene 2297736 2298805 0.43 - . g458 Scaffold_1 AUGUSTUS transcript 2297736 2298805 0.43 - . g458.t1 Scaffold_1 AUGUSTUS stop_codon 2297736 2297738 . - 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_1 AUGUSTUS CDS 2297736 2298041 0.85 - 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_1 AUGUSTUS CDS 2298126 2298366 0.74 - 1 transcript_id "g458.t1"; gene_id "g458"; Scaffold_1 AUGUSTUS CDS 2298474 2298805 0.51 - 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_1 AUGUSTUS start_codon 2298803 2298805 . - 0 transcript_id "g458.t1"; gene_id "g458"; # protein sequence = [MNQTTNLIKVSSISTYWAETEETEPILDPEGGMSEESDEDIEIEIAPAPAPASRKRKNVTKTWSIEDDNLENLKSEDE # EAKEKERKSRKKKKGMDQDKKFSSPRKQIGLSNTTATFSEFQDIIYTTLDCKDVRVKPDLSYRLPTASKGSHISLKSEDDWTCCLQDIKNTHLGRPKA # HQTLPIDVTIVISDQNPSVAKNSKSKSKGKRRGSSVQQMLTVINLDGSDGEYDVDDEEEESGGLLSGDEKKQLDALKAMLKQCQKCGHEIMCKIDVQG # QHVKLSYNMLRAWVIALV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g458 ### # start gene g459 Scaffold_1 AUGUSTUS gene 2304483 2305250 0.99 + . g459 Scaffold_1 AUGUSTUS transcript 2304483 2305250 0.99 + . g459.t1 Scaffold_1 AUGUSTUS start_codon 2304483 2304485 . + 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_1 AUGUSTUS CDS 2304483 2304616 0.99 + 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_1 AUGUSTUS CDS 2304998 2305250 0.99 + 1 transcript_id "g459.t1"; gene_id "g459"; Scaffold_1 AUGUSTUS stop_codon 2305248 2305250 . + 0 transcript_id "g459.t1"; gene_id "g459"; # protein sequence = [MRTSSTVTATTSTHTHSQSFDNDDGSASGPAVVCYKCGTEGHRSSSPGSGARPRDHSTHIGSRDYDNGYHGAHTNLYR # SRTREDSDRYYVSVDKPQVDSTPNTRFELDGRYYSRVETTTPRNDYDDII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g459 ### # start gene g460 Scaffold_1 AUGUSTUS gene 2310048 2310458 0.93 - . g460 Scaffold_1 AUGUSTUS transcript 2310048 2310458 0.93 - . g460.t1 Scaffold_1 AUGUSTUS stop_codon 2310048 2310050 . - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_1 AUGUSTUS CDS 2310048 2310458 0.93 - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_1 AUGUSTUS start_codon 2310456 2310458 . - 0 transcript_id "g460.t1"; gene_id "g460"; # protein sequence = [MSDTKNMKEDSTTGATAIYTQASSVHSLHSSTTIHDHQATITDVNVNYISHDHEKVKLDHDQHHHDPSHEALGHGESA # IPTDKKEEEIENLQDDWEDDPINARNWPSSKKWTSVAIVSTRTSPSYPITDSLMGSFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g460 ### # start gene g461 Scaffold_1 AUGUSTUS gene 2312696 2313622 0.91 - . g461 Scaffold_1 AUGUSTUS transcript 2312696 2313622 0.91 - . g461.t1 Scaffold_1 AUGUSTUS stop_codon 2312696 2312698 . - 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_1 AUGUSTUS CDS 2312696 2313622 0.91 - 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_1 AUGUSTUS start_codon 2313620 2313622 . - 0 transcript_id "g461.t1"; gene_id "g461"; # protein sequence = [MAYRGCAPNPHLVSIISTIYPQQANTQYAHPFTEDIALLSLWSMHSTLFNSSIDSSPSKISSSLPPDSFSPSRLILPL # TPTFTDPDNDENGNKKSNFPFNYAERDILPPGSPPRPPVIPRSRSHTGIHPLLLKIALPHMPGVWYKEDWDDYMGMEVPYVLERVVIGDYGVQGIETL # LQQHSQSGSRDWWEPIRKTVVSFFQDPSEISPDLIDNSRKKTLTYVHRPNSLVVEDHNALVRALMKMGREKVIEVNLVDAGASDGMNVEKVNADDVEW # GTRMGAITRSDVSIFPPFFGFLSFFLHIDFRHFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g461 ### # start gene g462 Scaffold_1 AUGUSTUS gene 2323082 2324098 0.89 - . g462 Scaffold_1 AUGUSTUS transcript 2323082 2324098 0.89 - . g462.t1 Scaffold_1 AUGUSTUS stop_codon 2323082 2323084 . - 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_1 AUGUSTUS CDS 2323082 2324098 0.89 - 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_1 AUGUSTUS start_codon 2324096 2324098 . - 0 transcript_id "g462.t1"; gene_id "g462"; # protein sequence = [MELSKEITDVPDAQYLTIPGDLNVAPPPYSGRRFSPSMIPQPKAPAHRLFAQEADPLAEAEQIAQSQKDFSSPNSTRN # FTRRALQSIPATPSEWRTSSTALSLTTPGSIGQTPQHQDDTAAEMLFELLDDAGSISSTATSHTSTTIRPLSIPKKLNRILSVPPRPRQSAMTHGKSL # SASQDSAAAMRERSYPQHSRQESVTRVPRISLIPEDEAVPPITLTPSRLLSPRNPLIIPPHPITPPPPLPSLPPASTVAPAVFSPSKPRSIRSKVWNA # REINSRANALVDTQDGSRNIATASSISRSRSNSVPQRTDSQTTRTIYPHTRTVITDDFTSTYAP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g462 ### # start gene g463 Scaffold_1 AUGUSTUS gene 2324505 2326777 0.15 - . g463 Scaffold_1 AUGUSTUS transcript 2324505 2326777 0.15 - . g463.t1 Scaffold_1 AUGUSTUS stop_codon 2324505 2324507 . - 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_1 AUGUSTUS CDS 2324505 2326166 0.57 - 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_1 AUGUSTUS CDS 2326235 2326777 0.16 - 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_1 AUGUSTUS start_codon 2326775 2326777 . - 0 transcript_id "g463.t1"; gene_id "g463"; # protein sequence = [MFGLPFLLQFVLLAFMLLVLTFPGITVGFPTTSTNVTIDDQDPAIFYSAGQWNLSNSYNSLDVKGFHHLSGQSSAFAV # FNFTGTQRSVMWEHVSGFDSSLLIFAYIYPSLYLDVTGVAIYFLSPLWPYAVGAQLVLDNQPPAFVDLQDYSRSVSLSGGSETVSSAVVWGVENLELG # NHSLRIFSVGPHFPNFRYSSIDNATVKSPVSSFVGGSSVMPSPTVVEQTSSSTPVSHQSGTSAAIGAVVAVVVVLVIFVLVFLVFRYRKRKAARFPRL # DIWDGEDHPAENRDQSGSVMESSATHDATVLSMRSRSAERLLQSPTKTSSTLPSASKSTVAVSPRLPLPPINTKQLPALPPPDEETQSALKYTKSILS # AVSKRFTTPAPIPQSGSTAESTTSSFFPRPIFDEDHRMLSISRQHSLRGTTTPILTGSDALDPAKVSRIGTYPGVTTSKIELQEARRFPAKPITRNLV # PYPASENVQPPVTVEISREKNQSPPPLPTQPSTTVSPHISSSSVPYSAKRKSLNALTIIPENGGSRGKLDTEEINPSSNRTGKRVSGGKLRMEKERQR # RRRSKTPVTPQGPRPRPLPSLPASLSVSGYNTPLPSASSGGSSNSEALSSNGSVPTVNSQFSIKATVQGHVVRRRRPLPQTLPEARRSSLLLGSHILV # PLRSVPRGLSPGLDGVHSRALEISSIIQSQPERLKSAFMRQDQELKTPLSSSDSTCTEDDDDSQTGTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g463 ### # start gene g464 Scaffold_1 AUGUSTUS gene 2343461 2344962 0.87 + . g464 Scaffold_1 AUGUSTUS transcript 2343461 2344962 0.87 + . g464.t1 Scaffold_1 AUGUSTUS start_codon 2343461 2343463 . + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_1 AUGUSTUS CDS 2343461 2343463 0.9 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_1 AUGUSTUS CDS 2343565 2343709 0.91 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_1 AUGUSTUS CDS 2343989 2344962 0.93 + 2 transcript_id "g464.t1"; gene_id "g464"; Scaffold_1 AUGUSTUS stop_codon 2344960 2344962 . + 0 transcript_id "g464.t1"; gene_id "g464"; # protein sequence = [MYSLGTEASEVGVVDARIYENGMVALTGSLTLLEVKGWEGARPMTLANPNFQRRMAEFDTLNVPSAQGNVKQVEWCGN # DAIVVTWDSLAVLVGPFADTLQYYYVGSTFAVTETDGVRILGADVCDLIQKVPSSTLSIFRPGSTSPAAILYDAWESFSQRSPKSDESIRSIRPELAT # AVDGCIDAAGQEWEPYWQRRLLSVSHDCSYNVCLADNLVKAAKFGQGFLDLYDPTDFINMGQTLKVLNAVRFYEIGIPLTYAQYSYTSPTHLISRLTS # RNMHLLALRISTFLSLKPDVVLKHWASAKIMRTRPVASGTGKDAELDSDDEVCRLIVDKFKQLGDVEVSYAEIAKRAWEVGRTGLATKVKFGFIPLNS # F] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g464 ### # start gene g465 Scaffold_1 AUGUSTUS gene 2350276 2352306 0.12 - . g465 Scaffold_1 AUGUSTUS transcript 2350276 2352306 0.12 - . g465.t1 Scaffold_1 AUGUSTUS stop_codon 2350276 2350278 . - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_1 AUGUSTUS CDS 2350276 2350538 0.78 - 2 transcript_id "g465.t1"; gene_id "g465"; Scaffold_1 AUGUSTUS CDS 2350756 2351167 0.6 - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_1 AUGUSTUS CDS 2351301 2351581 0.36 - 2 transcript_id "g465.t1"; gene_id "g465"; Scaffold_1 AUGUSTUS CDS 2352279 2352306 0.71 - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_1 AUGUSTUS start_codon 2352304 2352306 . - 0 transcript_id "g465.t1"; gene_id "g465"; # protein sequence = [MNISEEEKFYAQSSADGGIIIQVIGELSNNNGPWQKFVQTFFLAEQPNGYFVLNDIFRFLKEDAVEGDSDEVASDSVS # APEPVAVPAEYPREPSPPPSPPVEVPATPAPVSRTPTPEPTHDVAPTPPPAAAVIAPSPSPTPAPAASATTPAPPAPAAAPVPKTWANLAASQRSGAT # LLPMTPEVPRRMFPIPQLLPAAVVQTPVKPSGTPSRTPHPAYAAAQSVTTAQCFIKVCDLSLNILDAARRAIILSLPPVAGGEGGVKVDIGGGETLKI # IVETKKERGDRPASRGRGGPPFAGEGRGASSSDGRGGGFRGSARGSGRGRGAK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g465 ### # start gene g466 Scaffold_1 AUGUSTUS gene 2358045 2358695 1 + . g466 Scaffold_1 AUGUSTUS transcript 2358045 2358695 1 + . g466.t1 Scaffold_1 AUGUSTUS start_codon 2358045 2358047 . + 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_1 AUGUSTUS CDS 2358045 2358695 1 + 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_1 AUGUSTUS stop_codon 2358693 2358695 . + 0 transcript_id "g466.t1"; gene_id "g466"; # protein sequence = [MEARSGSISGDWEEVQHPGQAPGHPVDSEKGDKDWETVHHPDQAPGHPTKSTAAAHPEPPRTGAKVPKQKPKDPERDN # SLVSLLSYTWVGIETGRPGDTRVSTYDDMIHHEAIELIGKAAKYKWKLTNYLINPYNPHMYPAATDPHTTEFKFLLQLEYGHGGQGTNYCEGRVEGEP # KDGCVGIVRIGKGLKSELRNKDGVVVRMSFGFEDSDSESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g466 ### # start gene g467 Scaffold_1 AUGUSTUS gene 2362922 2363158 0.45 + . g467 Scaffold_1 AUGUSTUS transcript 2362922 2363158 0.45 + . g467.t1 Scaffold_1 AUGUSTUS start_codon 2362922 2362924 . + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_1 AUGUSTUS CDS 2362922 2363158 0.45 + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_1 AUGUSTUS stop_codon 2363156 2363158 . + 0 transcript_id "g467.t1"; gene_id "g467"; # protein sequence = [MIYLTFFTQVESFIPLWEWDVPKKKSKKKKGDKHKDKSSDVEKLKKNGGAFVEEVEDSGNSRPQSRTAKVEEVEDEDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g467 ### # start gene g468 Scaffold_1 AUGUSTUS gene 2364626 2366260 0.88 + . g468 Scaffold_1 AUGUSTUS transcript 2364626 2366260 0.88 + . g468.t1 Scaffold_1 AUGUSTUS start_codon 2364626 2364628 . + 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_1 AUGUSTUS CDS 2364626 2366260 0.88 + 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_1 AUGUSTUS stop_codon 2366258 2366260 . + 0 transcript_id "g468.t1"; gene_id "g468"; # protein sequence = [MIQQRKDAIENLYSTLPVVERTLLDAEIEGTPMFSMPTTNIIVDDTNMSDSWEEIPARDISSSSVRMNGVIPTASQDH # PQINGVVLPTPSASASATAVPIPRESLVPLISATAVPSSFTLTSSTGPGNRENLASSRSVTTRFGGAPILPIAGSSGDSSIAPNSSLEFSGTVDSSGR # TAHSLNGELTRLTQPSGRKSLPFSSAAFNSPNSALGLSTSGTGFGSTPTLFSSSKRKPNAFYKPPIVNNPPLSNPFSIEDPAPEFGGASRRSTTGSHS # PERPPSNEKQNRNRGVDQLAVSEGGRQNGDILENEAMAVDEGQGAGLDYPLFVNAGSTSPENNERKSRRSLISASSSANSAGASLRTSQKRPPGAFTD # EEDEDMIEDIPSHPPPRQTRLRKSNVPYTSTSAATANAHTSASAKSSASASTSARTTKPRGKKPRQTTTSLKSKRRVPGGMSDDDDDDEEDDGDAGQE # EVEEDQDHVAPLAARRTMRKTRSSVASALSTEEPGPRRRSSRISVAGETGAGGASSKRVTRKSTAGTGGKRKQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g468 ### # start gene g469 Scaffold_1 AUGUSTUS gene 2366729 2367514 0.59 - . g469 Scaffold_1 AUGUSTUS transcript 2366729 2367514 0.59 - . g469.t1 Scaffold_1 AUGUSTUS stop_codon 2366729 2366731 . - 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_1 AUGUSTUS CDS 2366729 2367514 0.59 - 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_1 AUGUSTUS start_codon 2367512 2367514 . - 0 transcript_id "g469.t1"; gene_id "g469"; # protein sequence = [MTGAKVAGHRGYYLTNDGIDLNQALISYGLDFLRKKGYKKIQPPFMMNKDWMAKTAQLDQFDEELYKARNIQIFSKML # FLMVRKVIADDDEKYLIATSEQPISVFHSDEWLEKTQLPIRYAGYSTCFRKEAGSAGRDMWGIFRVHQFEKVEQFIVDDPEKSWETLENMISNSEEFY # QSLGLRYQVVGIVSSALNLAAAMKYDLEAWFPFQKGYKELVSCSNCTDYRAFNSPEILPMFTDRIFCQSLAIRGPMRSEEQGSNA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g469 ### # start gene g470 Scaffold_1 AUGUSTUS gene 2373132 2373488 0.55 + . g470 Scaffold_1 AUGUSTUS transcript 2373132 2373488 0.55 + . g470.t1 Scaffold_1 AUGUSTUS start_codon 2373132 2373134 . + 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_1 AUGUSTUS CDS 2373132 2373488 0.55 + 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_1 AUGUSTUS stop_codon 2373486 2373488 . + 0 transcript_id "g470.t1"; gene_id "g470"; # protein sequence = [MQQPAMDSPPIGAAPAHHSKRRQYAAGQTQAYYGSAEEPSMLQPMSQPPQQAGMEPQLFTPGLAAPSFAMQQQGQTQP # PYYDPNQAQQQPDYINSQQQQPAYGQPNPTLLLINSVKWD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g470 ### # start gene g471 Scaffold_1 AUGUSTUS gene 2378808 2379410 0.82 - . g471 Scaffold_1 AUGUSTUS transcript 2378808 2379410 0.82 - . g471.t1 Scaffold_1 AUGUSTUS stop_codon 2378808 2378810 . - 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_1 AUGUSTUS CDS 2378808 2379410 0.82 - 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_1 AUGUSTUS start_codon 2379408 2379410 . - 0 transcript_id "g471.t1"; gene_id "g471"; # protein sequence = [MTSLAGAAHIIHRSDNVMDRVDSSADDSALDDGDTPELSEVAISKHLATSIVASGANTNARRLSSVGPDFNYPLDLHT # FPVSHLSERTRRPSVIRADSGTETIATIASSLKDSVPPTRTQTFESTSAILNQTRPLQYEESPTVTDQVARKQNRRSIIQFAALCWCFALEGWNDGSV # GPLLPVIQTYYSVRVSASKKMRLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g471 ### # start gene g472 Scaffold_1 AUGUSTUS gene 2395254 2395898 0.61 - . g472 Scaffold_1 AUGUSTUS transcript 2395254 2395898 0.61 - . g472.t1 Scaffold_1 AUGUSTUS stop_codon 2395254 2395256 . - 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_1 AUGUSTUS CDS 2395254 2395898 0.61 - 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_1 AUGUSTUS start_codon 2395896 2395898 . - 0 transcript_id "g472.t1"; gene_id "g472"; # protein sequence = [MSSTTMSSRSFTVFVDTPASEETETKPKPTTNTRLSRSLSESSLSLGLSPIYTTDKENLDPLTGERVGSSTALGKKRK # GSISVLAVKPPLEVKLSKGKDVSASEAQPEAKKRKSSVSSSLSSKSKSKKELKAPGSGKKSAKRSSRRASPMPKLDEEVESDKEQTRVNQALINSKCY # DLTVKPLADVSEAYEMEGDYTEEREVFQFVKVSLSTST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g472 ### # start gene g473 Scaffold_1 AUGUSTUS gene 2398161 2399441 0.92 + . g473 Scaffold_1 AUGUSTUS transcript 2398161 2399441 0.92 + . g473.t1 Scaffold_1 AUGUSTUS start_codon 2398161 2398163 . + 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_1 AUGUSTUS CDS 2398161 2399441 0.92 + 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_1 AUGUSTUS stop_codon 2399439 2399441 . + 0 transcript_id "g473.t1"; gene_id "g473"; # protein sequence = [MPRRGIRSDWELFTYVQRIWSLGIILLNLATGRNPWKSASVSDPTFQAYLRDPQNFLPTVLPISPEVNAILARMLEVD # WRDRMTIPELRVALEDVSTFYSDTVIFEGSMAKCGWESGIEIDSESTKHSLIQSQAAELKSHWSQESFSSDIVFASHSAMDSPWVGYSHFPNDAYAMR # SDVEPGYQRHSMVEERCELHSRPQTPPSMRSPCVSAESGASYPVTPNSFDLTFGGRAVLPQRKPLIIDTGCVRPPYFRGNSLDSGSVGSSIMQTAVEY # PSDVYAAETFFGSSMSNIAVVQSVRLGDRGPTEDKEMASPTAWEYSATQVSQSSSMFSSAKNSYTTTNMSFDNRSSAPSPEPIEWSELSSRLKENHPP # ESQPSFSLLMSNIADVSPPLRSLSPRERISKRSLSDTLYTAQVFSSSFLGAEFW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g473 ### # start gene g474 Scaffold_1 AUGUSTUS gene 2400151 2400834 0.4 - . g474 Scaffold_1 AUGUSTUS transcript 2400151 2400834 0.4 - . g474.t1 Scaffold_1 AUGUSTUS stop_codon 2400151 2400153 . - 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_1 AUGUSTUS CDS 2400151 2400834 0.4 - 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_1 AUGUSTUS start_codon 2400832 2400834 . - 0 transcript_id "g474.t1"; gene_id "g474"; # protein sequence = [MDSREVLDLNPTATNPFHNRVIVRNHRSIFHEAMALDGFNFDDPNWTPAKSDLADEELQVNESAGLEGYPVEQLMKFV # LVRRFVVQQTGKGKIDHHQCFTVVGDGNGMVGLGMGTDTEPTHASNKSHIAAIKNMDYVDRFENRTIWTEMSGKFRSTQIKMRPRPMGFGLRCQPILH # QVLKAAGIKDISAKIWGSRNPIMILQGALQMLQGGHNPLGFGNGIGARGRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g474 ### # start gene g475 Scaffold_1 AUGUSTUS gene 2403570 2404691 0.48 + . g475 Scaffold_1 AUGUSTUS transcript 2403570 2404691 0.48 + . g475.t1 Scaffold_1 AUGUSTUS start_codon 2403570 2403572 . + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_1 AUGUSTUS CDS 2403570 2403591 0.61 + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_1 AUGUSTUS CDS 2403643 2404691 0.69 + 2 transcript_id "g475.t1"; gene_id "g475"; Scaffold_1 AUGUSTUS stop_codon 2404689 2404691 . + 0 transcript_id "g475.t1"; gene_id "g475"; # protein sequence = [MDVVSDHTAPHLINNIDSEEKEHIDQPGILNNSDCADPANLTLESKNVELPRFPSVRGESSPDAEDKTSVSPPSSASA # SILSMPDPLSSSDTTSVQYDTIHISDYTRLLEYESSVSSPSVTGHGIGINAVSLPPQFKNERSNTFAPQRLPESAYRDLSDHDFESESEPESESSFPS # VTSSFFFSSPASVASHGPGEDSHEDSNEDRESRSLRATQELVIPSLMLPEALNLPSVVHDYPLETPHPPKPSIPHSQAPSASDVLRLLVVAPSDLRRP # SIMEGDQVPYLSQRVKKDFDDVVSQTNALHLHAARGYQPELHSVVADQDMETVLATVIDAFVKNELFTAVVLTSEISHDGTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g475 ### # start gene g476 Scaffold_1 AUGUSTUS gene 2409599 2410530 0.45 + . g476 Scaffold_1 AUGUSTUS transcript 2409599 2410530 0.45 + . g476.t1 Scaffold_1 AUGUSTUS start_codon 2409599 2409601 . + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_1 AUGUSTUS CDS 2409599 2409604 0.89 + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_1 AUGUSTUS CDS 2409710 2409957 0.53 + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_1 AUGUSTUS CDS 2410023 2410530 0.49 + 1 transcript_id "g476.t1"; gene_id "g476"; Scaffold_1 AUGUSTUS stop_codon 2410528 2410530 . + 0 transcript_id "g476.t1"; gene_id "g476"; # protein sequence = [MESKGIVFFGAANPLLNVDIAGLSDSTEFPYILLTPQSEAERVFEESLNDRGVEVIRNTKVIGFGESSKEGLHVYFED # GSSVIASKIVGLGSQMNVQVRSLAGISFQDPSSNVMYDENPSSASFMLFTLADVVLNIHPSIHIPRDAISWHLNGRIMFCPLELPEKLHHFDAPGSSF # WRIAIATPPKTATIPPRHPDQVYLQNEIDIRKPWKESIRLYHLHTAATYRVRSAVAETFFKSVGNGKVLLVGDSGQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g476 ### # start gene g477 Scaffold_1 AUGUSTUS gene 2411584 2413145 0.3 + . g477 Scaffold_1 AUGUSTUS transcript 2411584 2413145 0.3 + . g477.t1 Scaffold_1 AUGUSTUS start_codon 2411584 2411586 . + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_1 AUGUSTUS CDS 2411584 2412288 0.33 + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_1 AUGUSTUS CDS 2412390 2413145 0.74 + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_1 AUGUSTUS stop_codon 2413143 2413145 . + 0 transcript_id "g477.t1"; gene_id "g477"; # protein sequence = [MSGKTSIQHILHSHYRAITDINWHTTERDTVVSTGIDSWVWAWDMREPRKPIFGLCAFSSPGTQVKWNRQNSHILASS # HADKVLIWDRRKGSLPVATIDAHSSRIYGIDWSQTEPTEIVTCSLDKTIKVWDSKTMTLKTMIRTGYPVWRARSLPFGRGVLSLAQRGETALEMFSLE # NQGLGPGTSEVPVDSFQGHSDVVKEFVWRKGANNTVFQLITWSKDRTLRFWPVDSDMMRQQPATSVTTESAPRTKSFRNATFPDSSPNTDKLDNNLNP # NPISAPIGHRSILAEVRAGGPINSAHQAQPRNRQRTTDSFNITLQTAPSPPLQSPDIFGSVTPTQTQSTLTAPAVAGISNIEGTVPDSSLGLPGSANA # AGISGGGTMSRGAAGGLKSRARVDALSWLSSVKDSSTTAGTATIAIARVSVDEDKINNETDGANGRRSASRDGLDSKDSRYRDESVVQPVGHSLQDEC # VILLDPLFLSSSELLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g477 ### # start gene g478 Scaffold_1 AUGUSTUS gene 2413459 2414880 0.4 + . g478 Scaffold_1 AUGUSTUS transcript 2413459 2414880 0.4 + . g478.t1 Scaffold_1 AUGUSTUS start_codon 2413459 2413461 . + 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_1 AUGUSTUS CDS 2413459 2413838 0.4 + 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_1 AUGUSTUS CDS 2414004 2414880 0.59 + 1 transcript_id "g478.t1"; gene_id "g478"; Scaffold_1 AUGUSTUS stop_codon 2414878 2414880 . + 0 transcript_id "g478.t1"; gene_id "g478"; # protein sequence = [MEYTPLITMKDRAFMLRRLRRIIATLRERQRPCLEACLRFLVFKDESFVEIAEGDSGGATGHASVRRPGLKTRSSGEN # GEDLGDSDSSEEDIQRMAEMGNHVGKMMRLRCRCCGIIKIWRNKDLSRYEERVDHASFDHDSLNVNTTDGTNADVLGYTEREAFHQSPALISDAVRRL # SLAARDRDSTNRPGLNVSMANALTLDTIFLTPKVSTVGQSVPDFYSYTYPSSQHAAQTHPSPAQVQAQITRVMTNLLTFPRHRGRRQSNSFRSSAGLN # YIGEEGKSIEEDAIGTSQRSYSALALMAGSPRRSEVIISNTTGLVGGDKSVAEDYIFLPTTFGEGSNAVDDGSGLFNGKGGVLVQICHSNAAAARLHG # RYDHERIFRSIGALLATAALSANRGNKSFDESASCLSLVKQLLDRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g478 ### # start gene g479 Scaffold_1 AUGUSTUS gene 2416888 2417277 0.84 + . g479 Scaffold_1 AUGUSTUS transcript 2416888 2417277 0.84 + . g479.t1 Scaffold_1 AUGUSTUS start_codon 2416888 2416890 . + 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_1 AUGUSTUS CDS 2416888 2417277 0.84 + 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_1 AUGUSTUS stop_codon 2417275 2417277 . + 0 transcript_id "g479.t1"; gene_id "g479"; # protein sequence = [MQTNCSTLSSLEITPALVKPMVINTPITGDTTVLRIAKVKIAPTGKLDHSPQGIFSLANAEPRQINPIGTEAAPMKLA # KSNTNASGGSPSGALGICEFVVAMKSPLSDGTRAMGLRRSLIERLGSKSIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g479 ### # start gene g480 Scaffold_1 AUGUSTUS gene 2421797 2422034 0.99 - . g480 Scaffold_1 AUGUSTUS transcript 2421797 2422034 0.99 - . g480.t1 Scaffold_1 AUGUSTUS stop_codon 2421797 2421799 . - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_1 AUGUSTUS CDS 2421797 2421951 0.99 - 2 transcript_id "g480.t1"; gene_id "g480"; Scaffold_1 AUGUSTUS CDS 2422025 2422034 1 - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_1 AUGUSTUS start_codon 2422032 2422034 . - 0 transcript_id "g480.t1"; gene_id "g480"; # protein sequence = [MGAYMVETKGYTLEEIATVFDGKNPSLTSVDILPPGEQQGGEADDSKSREDGVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g480 ### # start gene g481 Scaffold_1 AUGUSTUS gene 2434590 2435219 0.99 + . g481 Scaffold_1 AUGUSTUS transcript 2434590 2435219 0.99 + . g481.t1 Scaffold_1 AUGUSTUS start_codon 2434590 2434592 . + 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_1 AUGUSTUS CDS 2434590 2435219 0.99 + 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_1 AUGUSTUS stop_codon 2435217 2435219 . + 0 transcript_id "g481.t1"; gene_id "g481"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g481 ### # start gene g482 Scaffold_1 AUGUSTUS gene 2440148 2441128 0.83 + . g482 Scaffold_1 AUGUSTUS transcript 2440148 2441128 0.83 + . g482.t1 Scaffold_1 AUGUSTUS start_codon 2440148 2440150 . + 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_1 AUGUSTUS CDS 2440148 2441128 0.83 + 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_1 AUGUSTUS stop_codon 2441126 2441128 . + 0 transcript_id "g482.t1"; gene_id "g482"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKIDRNYLQALKPKVEDEFKD # LLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g482 ### # start gene g483 Scaffold_1 AUGUSTUS gene 2441499 2445897 0.06 + . g483 Scaffold_1 AUGUSTUS transcript 2441499 2445897 0.06 + . g483.t1 Scaffold_1 AUGUSTUS start_codon 2441499 2441501 . + 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_1 AUGUSTUS CDS 2441499 2442577 0.33 + 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_1 AUGUSTUS CDS 2442661 2443143 0.36 + 1 transcript_id "g483.t1"; gene_id "g483"; Scaffold_1 AUGUSTUS CDS 2443240 2443430 0.43 + 1 transcript_id "g483.t1"; gene_id "g483"; Scaffold_1 AUGUSTUS CDS 2443478 2445897 0.44 + 2 transcript_id "g483.t1"; gene_id "g483"; Scaffold_1 AUGUSTUS stop_codon 2445895 2445897 . + 0 transcript_id "g483.t1"; gene_id "g483"; # protein sequence = [MEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKKISTPMKEQDRSMRTLRSNAVA # PEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIEDVMNLMTKIKYAIEESVQGLKRITTVSTLS # EDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDSSDHPVVVANQSNGL # RAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFNLVKLRCTYNYTYRIKRHFNDPNSHKRVTVGT # YPRGQKGRNIQINTSRYNEPKNVTPDSEKSTGEHDSKGNFSFLDELSSDQGEDEYAISFHFDEKQNIVLDGYKRCEQETFSKKELSEAYVLASREHLK # SQDDQAEEIIDCYLNQKKIGDKQVFCVWRDGVLGEFDDQLNNEQFNLNPINLGENCDKSESTETAQNQCNNANTSETIRDDNWNKPKNSQRTRKRIVR # YEILKRGTESFQRSQPTQDSKDKKENVQADVLNEPPTNKLEERIRLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKA # TLPDEFRIERHIHGDPLLELPELSKYPKPFAPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHE # PWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYD # ERELDQLSRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRFVWEHFQNMNR # VIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCD # KAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVET # DASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQI # DPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESL # GEMSKDERIKFIRLIKKFQVDDQGRLYHRILINLINHN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g483 ### # start gene g484 Scaffold_1 AUGUSTUS gene 2446068 2446883 0.25 + . g484 Scaffold_1 AUGUSTUS transcript 2446068 2446883 0.25 + . g484.t1 Scaffold_1 AUGUSTUS start_codon 2446068 2446070 . + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_1 AUGUSTUS CDS 2446068 2446883 0.25 + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_1 AUGUSTUS stop_codon 2446881 2446883 . + 0 transcript_id "g484.t1"; gene_id "g484"; # protein sequence = [MKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDI # VESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRLNENIDIQLKIGISNQVNWSRLEILELKRVWIERCIQDIEDLWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g484 ### # start gene g485 Scaffold_1 AUGUSTUS gene 2446922 2447179 0.42 + . g485 Scaffold_1 AUGUSTUS transcript 2446922 2447179 0.42 + . g485.t1 Scaffold_1 AUGUSTUS start_codon 2446922 2446924 . + 0 transcript_id "g485.t1"; gene_id "g485"; Scaffold_1 AUGUSTUS CDS 2446922 2447179 0.42 + 0 transcript_id "g485.t1"; gene_id "g485"; Scaffold_1 AUGUSTUS stop_codon 2447177 2447179 . + 0 transcript_id "g485.t1"; gene_id "g485"; # protein sequence = [MDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEE # LSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g485 ### # start gene g486 Scaffold_1 AUGUSTUS gene 2451177 2451677 0.46 - . g486 Scaffold_1 AUGUSTUS transcript 2451177 2451677 0.46 - . g486.t1 Scaffold_1 AUGUSTUS stop_codon 2451177 2451179 . - 0 transcript_id "g486.t1"; gene_id "g486"; Scaffold_1 AUGUSTUS CDS 2451177 2451604 1 - 2 transcript_id "g486.t1"; gene_id "g486"; Scaffold_1 AUGUSTUS CDS 2451668 2451677 0.46 - 0 transcript_id "g486.t1"; gene_id "g486"; Scaffold_1 AUGUSTUS start_codon 2451675 2451677 . - 0 transcript_id "g486.t1"; gene_id "g486"; # protein sequence = [MPPLASPRSARSKDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRS # RKVAPAASKGKARQIVVTDEDSASNEVESEDEDEEEDSAPPPKRLKTTSSISGKVILHLFRYFINLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g486 ### # start gene g487 Scaffold_1 AUGUSTUS gene 2457118 2457621 0.98 + . g487 Scaffold_1 AUGUSTUS transcript 2457118 2457621 0.98 + . g487.t1 Scaffold_1 AUGUSTUS start_codon 2457118 2457120 . + 0 transcript_id "g487.t1"; gene_id "g487"; Scaffold_1 AUGUSTUS CDS 2457118 2457621 0.98 + 0 transcript_id "g487.t1"; gene_id "g487"; Scaffold_1 AUGUSTUS stop_codon 2457619 2457621 . + 0 transcript_id "g487.t1"; gene_id "g487"; # protein sequence = [MSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTLRLCVDYRALNKITKKNRYPLPLIGTLVDQLRKAKI # FTKIDLRAGYNNVRVAQGHEWKTAFRTRYGSFEYLVMPFGLTNAPSVFQFFMNEIFHDMVDVCVVIYLDDILIYSDDEVSHVEHVRKVP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g487 ### # start gene g488 Scaffold_1 AUGUSTUS gene 2460233 2460937 0.57 - . g488 Scaffold_1 AUGUSTUS transcript 2460233 2460937 0.57 - . g488.t1 Scaffold_1 AUGUSTUS stop_codon 2460233 2460235 . - 0 transcript_id "g488.t1"; gene_id "g488"; Scaffold_1 AUGUSTUS CDS 2460233 2460937 0.57 - 0 transcript_id "g488.t1"; gene_id "g488"; Scaffold_1 AUGUSTUS start_codon 2460935 2460937 . - 0 transcript_id "g488.t1"; gene_id "g488"; # protein sequence = [MITGNRQSLNLGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGDTYQQ # TTTYALRYSVNAMTSNCRTPRTTRDTRLGQYPFLVAHVRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVA # QTCMENKFMLFLAPAPSQPKALPISTERSSVSMVFLFTLNPTADPSLQLNSCDPFSLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g488 ### # start gene g489 Scaffold_1 AUGUSTUS gene 2463238 2464280 0.39 - . g489 Scaffold_1 AUGUSTUS transcript 2463238 2464280 0.39 - . g489.t1 Scaffold_1 AUGUSTUS stop_codon 2463238 2463240 . - 0 transcript_id "g489.t1"; gene_id "g489"; Scaffold_1 AUGUSTUS CDS 2463238 2463919 0.82 - 1 transcript_id "g489.t1"; gene_id "g489"; Scaffold_1 AUGUSTUS CDS 2464039 2464280 0.39 - 0 transcript_id "g489.t1"; gene_id "g489"; Scaffold_1 AUGUSTUS start_codon 2464278 2464280 . - 0 transcript_id "g489.t1"; gene_id "g489"; # protein sequence = [MSTPVPPAPNTSADDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LINQRFEPMDPGMEARSEIKNLRHSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPT # MTGRNSGYSPTHNAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVKQNCPHQKPPAVTVDAEDIWKQSVKTSSWDSDETEADASNL # DANRYPLRYPRHSPVPKIRPRSRPRPQHLLLHP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g489 ### # start gene g490 Scaffold_1 AUGUSTUS gene 2477294 2477692 0.79 + . g490 Scaffold_1 AUGUSTUS transcript 2477294 2477692 0.79 + . g490.t1 Scaffold_1 AUGUSTUS start_codon 2477294 2477296 . + 0 transcript_id "g490.t1"; gene_id "g490"; Scaffold_1 AUGUSTUS CDS 2477294 2477692 0.79 + 0 transcript_id "g490.t1"; gene_id "g490"; Scaffold_1 AUGUSTUS stop_codon 2477690 2477692 . + 0 transcript_id "g490.t1"; gene_id "g490"; # protein sequence = [MIGSSFDKYYQTLSIAFSSPPINNPNSFSRGHINLPFAADVSKTDRDYLQVFKPKVEHKFKNLLGIKLESLIPRELTE # EQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKEMLKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g490 ### # start gene g491 Scaffold_1 AUGUSTUS gene 2477987 2478514 1 + . g491 Scaffold_1 AUGUSTUS transcript 2477987 2478514 1 + . g491.t1 Scaffold_1 AUGUSTUS start_codon 2477987 2477989 . + 0 transcript_id "g491.t1"; gene_id "g491"; Scaffold_1 AUGUSTUS CDS 2477987 2478514 1 + 0 transcript_id "g491.t1"; gene_id "g491"; Scaffold_1 AUGUSTUS stop_codon 2478512 2478514 . + 0 transcript_id "g491.t1"; gene_id "g491"; # protein sequence = [MLKPTNQINSEHRPYDHVQPTTYRPIQNNTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPDIEENIAKKIFNAKVDLS # TEELAALSPAIRKIIMCKIRNRRVRPRTKANNYVSTLSEDGETEILDDPSSVQMIDTCIRIEDLWQDQADMFEVLTESRNDIPVGSIVQKDIVESFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g491 ### # start gene g492 Scaffold_1 AUGUSTUS gene 2478569 2478892 0.82 + . g492 Scaffold_1 AUGUSTUS transcript 2478569 2478892 0.82 + . g492.t1 Scaffold_1 AUGUSTUS start_codon 2478569 2478571 . + 0 transcript_id "g492.t1"; gene_id "g492"; Scaffold_1 AUGUSTUS CDS 2478569 2478892 0.82 + 0 transcript_id "g492.t1"; gene_id "g492"; Scaffold_1 AUGUSTUS stop_codon 2478890 2478892 . + 0 transcript_id "g492.t1"; gene_id "g492"; # protein sequence = [MVYEDHNDHLVAVANQSNGLRAVTPEINKDEEIESVLDQDSQIVVIDQLIAIGLGITWDLEFTIRMQDASGKLNQTLG # VARNIPFKFGEVTVYLQLTYRIKLHFKCY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g492 ### # start gene g493 Scaffold_1 AUGUSTUS gene 2479054 2479482 0.67 + . g493 Scaffold_1 AUGUSTUS transcript 2479054 2479482 0.67 + . g493.t1 Scaffold_1 AUGUSTUS start_codon 2479054 2479056 . + 0 transcript_id "g493.t1"; gene_id "g493"; Scaffold_1 AUGUSTUS CDS 2479054 2479482 0.67 + 0 transcript_id "g493.t1"; gene_id "g493"; Scaffold_1 AUGUSTUS stop_codon 2479480 2479482 . + 0 transcript_id "g493.t1"; gene_id "g493"; # protein sequence = [MNQRMFHLIMNNRQATEFEKVRYELRQQKKGKAQDSNDKKENVQPDLLNEPPTNKLEEHIKLNQQVKSPINLIDETIK # QVVNEALGVEKPINLNTEEVFTKYKPVDKKVNPIKAMLPDEFRIERHCHKWRGGVTSGAGKWSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g493 ### # start gene g494 Scaffold_1 AUGUSTUS gene 2480770 2481777 0.28 + . g494 Scaffold_1 AUGUSTUS transcript 2480770 2481777 0.28 + . g494.t1 Scaffold_1 AUGUSTUS start_codon 2480770 2480772 . + 0 transcript_id "g494.t1"; gene_id "g494"; Scaffold_1 AUGUSTUS CDS 2480770 2481777 0.28 + 0 transcript_id "g494.t1"; gene_id "g494"; Scaffold_1 AUGUSTUS stop_codon 2481775 2481777 . + 0 transcript_id "g494.t1"; gene_id "g494"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKCPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTSKNLYKIIRTQKHIDLLRVID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g494 ### # start gene g495 Scaffold_1 AUGUSTUS gene 2482357 2483197 0.05 + . g495 Scaffold_1 AUGUSTUS transcript 2482357 2483197 0.05 + . g495.t1 Scaffold_1 AUGUSTUS start_codon 2482357 2482359 . + 0 transcript_id "g495.t1"; gene_id "g495"; Scaffold_1 AUGUSTUS CDS 2482357 2482483 0.13 + 0 transcript_id "g495.t1"; gene_id "g495"; Scaffold_1 AUGUSTUS CDS 2482618 2482898 0.24 + 2 transcript_id "g495.t1"; gene_id "g495"; Scaffold_1 AUGUSTUS CDS 2482976 2483197 0.53 + 0 transcript_id "g495.t1"; gene_id "g495"; Scaffold_1 AUGUSTUS stop_codon 2483195 2483197 . + 0 transcript_id "g495.t1"; gene_id "g495"; # protein sequence = [MLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEK # VRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMPSEYCHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEY # WMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g495 ### # start gene g496 Scaffold_1 AUGUSTUS gene 2487518 2488054 0.72 + . g496 Scaffold_1 AUGUSTUS transcript 2487518 2488054 0.72 + . g496.t1 Scaffold_1 AUGUSTUS start_codon 2487518 2487520 . + 0 transcript_id "g496.t1"; gene_id "g496"; Scaffold_1 AUGUSTUS CDS 2487518 2488054 0.72 + 0 transcript_id "g496.t1"; gene_id "g496"; Scaffold_1 AUGUSTUS stop_codon 2488052 2488054 . + 0 transcript_id "g496.t1"; gene_id "g496"; # protein sequence = [MLIHWNVKDIEHVHNDPLPIITHQPEDPDSDSESIHVDNNDDGPMRFQWMQEAAHGPNSTTAVSTADNLGRRDMDLHY # NWHGNSPRSTQIIQDAAHWLAACVKESPNDDAQLLPPAPYASLKGPQHIVFLQVMAYFKKLAQNPEKPTLRVNVDGTTGTGKTYLIWAITHALHQHFS # PV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g496 ### # start gene g497 Scaffold_1 AUGUSTUS gene 2492519 2493610 0.48 - . g497 Scaffold_1 AUGUSTUS transcript 2492519 2493610 0.48 - . g497.t1 Scaffold_1 AUGUSTUS stop_codon 2492519 2492521 . - 0 transcript_id "g497.t1"; gene_id "g497"; Scaffold_1 AUGUSTUS CDS 2492519 2493610 0.48 - 0 transcript_id "g497.t1"; gene_id "g497"; Scaffold_1 AUGUSTUS start_codon 2493608 2493610 . - 0 transcript_id "g497.t1"; gene_id "g497"; # protein sequence = [MDLPIPLMIFLSSSSHLVYILPSLWLPITQDFRHSLAKSSLAAWLKENGVPAIYGVGTRVLTKKIRKKGSTLGQIAGK # KSRSSCRLETSYQSAAPSRALSPNSRSSWREDYLDIPFSDPIELILLLLLPSLSRVSTKRLVHLCFIPPDVLILDVGMKYNQIRCFTNRGVELKDSTL # EIRFLSDSEPYDGIFVSNGPEDPTTVKETIARISRATERADRPIFGICLSHQLMAFAAGATTSKMKYENRGHNIPCTDALSGRCYITRQNHGFQVDAD # TFPSGWKELFGNANNSSNEGIHCVDKPFFSVQFHPESTPGPRDTEFLFDVFIKNIVDHATTTTNSLISISMPGGKKRRKRQAHSESHSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g497 ### # start gene g498 Scaffold_1 AUGUSTUS gene 2496563 2497333 1 - . g498 Scaffold_1 AUGUSTUS transcript 2496563 2497333 1 - . g498.t1 Scaffold_1 AUGUSTUS stop_codon 2496563 2496565 . - 0 transcript_id "g498.t1"; gene_id "g498"; Scaffold_1 AUGUSTUS CDS 2496563 2497333 1 - 0 transcript_id "g498.t1"; gene_id "g498"; Scaffold_1 AUGUSTUS start_codon 2497331 2497333 . - 0 transcript_id "g498.t1"; gene_id "g498"; # protein sequence = [MYTKEDLQAIQCYELQSVKEVEAQKIAQAEEERRQSALIKTPLHPSSEIHDGSAWDPSSRTPTHSSSYTSVTQLSETS # SAPSSSTVQLPTHWIENPLLYHSLTQDLDIFIQKGDKVQRVYLSWDGCSVIVREGQRSNLTKVGSIIAPSLIQQSFEHVPPHPTRARGLFLVIRGEHV # GLIGRCVKSRYNPNSPDPDYTLIAFKLTKGSGRGMRWCQEILTDGFIYVPRADLVAIYETSAMKQEGNSLVEKFRDYMPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g498 ### # start gene g499 Scaffold_1 AUGUSTUS gene 2499181 2499925 0.51 - . g499 Scaffold_1 AUGUSTUS transcript 2499181 2499925 0.51 - . g499.t1 Scaffold_1 AUGUSTUS stop_codon 2499181 2499183 . - 0 transcript_id "g499.t1"; gene_id "g499"; Scaffold_1 AUGUSTUS CDS 2499181 2499828 0.96 - 0 transcript_id "g499.t1"; gene_id "g499"; Scaffold_1 AUGUSTUS CDS 2499878 2499925 0.51 - 0 transcript_id "g499.t1"; gene_id "g499"; Scaffold_1 AUGUSTUS start_codon 2499923 2499925 . - 0 transcript_id "g499.t1"; gene_id "g499"; # protein sequence = [MSSSSPHSSKATGFPEFTSNRRAIVRGYLDDEAQEEEEEEERQDAKDDEENDEDLGLDLAGFIDDSATAQHARSQVPI # YHHSPPIFSRLIKRYEYEASSSSSSTSSEHAVNFSDSDVGSSNSSSTRECWNVLRAFAVGTITTLPEAEDRLCALIGPAFNFNDWGPKFDAITEPDMD # IQQALLLIAEFEAIDASKVSPLLNPRFQMRIRAPIACPNSRAIHLLRNLQGTFPF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g499 ### # start gene g500 Scaffold_1 AUGUSTUS gene 2501465 2502355 0.59 + . g500 Scaffold_1 AUGUSTUS transcript 2501465 2502355 0.59 + . g500.t1 Scaffold_1 AUGUSTUS start_codon 2501465 2501467 . + 0 transcript_id "g500.t1"; gene_id "g500"; Scaffold_1 AUGUSTUS CDS 2501465 2502355 0.59 + 0 transcript_id "g500.t1"; gene_id "g500"; Scaffold_1 AUGUSTUS stop_codon 2502353 2502355 . + 0 transcript_id "g500.t1"; gene_id "g500"; # protein sequence = [MHQPQPHQLVDLDRLSSPSLTFHNDHHSAPAVMAELPRESYGIPQSRPNTTHTIPPWFPVHIPPPPEQPYPMYYPNPP # YPYPYPYPLSSEPPRSITPRVKIEYSSIHSTFLATIKDTDSLKDRKSWVKWNEAVWQAIADGFALGHICDEPPLGTPRTEWNTPLLRPVLSSNPTRKE # LEAKLKWDKNDGWTSSILTARLSDEARNHLPPMIDDRGERRTARQIYIRLKAIYQAAPDRKACLRIQDELMTSQIHGMDIKKFNLKWSSTLTTLRNYG # YDIPWDTLISKYISKLPSGPLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g500 ### # start gene g501 Scaffold_1 AUGUSTUS gene 2503143 2504309 0.9 + . g501 Scaffold_1 AUGUSTUS transcript 2503143 2504309 0.9 + . g501.t1 Scaffold_1 AUGUSTUS start_codon 2503143 2503145 . + 0 transcript_id "g501.t1"; gene_id "g501"; Scaffold_1 AUGUSTUS CDS 2503143 2504309 0.9 + 0 transcript_id "g501.t1"; gene_id "g501"; Scaffold_1 AUGUSTUS stop_codon 2504307 2504309 . + 0 transcript_id "g501.t1"; gene_id "g501"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g501 ### # start gene g502 Scaffold_1 AUGUSTUS gene 2504360 2506972 0.87 + . g502 Scaffold_1 AUGUSTUS transcript 2504360 2506972 0.87 + . g502.t1 Scaffold_1 AUGUSTUS start_codon 2504360 2504362 . + 0 transcript_id "g502.t1"; gene_id "g502"; Scaffold_1 AUGUSTUS CDS 2504360 2506972 0.87 + 0 transcript_id "g502.t1"; gene_id "g502"; Scaffold_1 AUGUSTUS stop_codon 2506970 2506972 . + 0 transcript_id "g502.t1"; gene_id "g502"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPRESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASERE # AQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCQTIQLQDTPDYTGHSTWSVPISGGLRCALLWKNTLRDARFVPVR # RSSDTHGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g502 ### # start gene g503 Scaffold_1 AUGUSTUS gene 2510800 2511486 0.35 + . g503 Scaffold_1 AUGUSTUS transcript 2510800 2511486 0.35 + . g503.t1 Scaffold_1 AUGUSTUS start_codon 2510800 2510802 . + 0 transcript_id "g503.t1"; gene_id "g503"; Scaffold_1 AUGUSTUS CDS 2510800 2511486 0.35 + 0 transcript_id "g503.t1"; gene_id "g503"; Scaffold_1 AUGUSTUS stop_codon 2511484 2511486 . + 0 transcript_id "g503.t1"; gene_id "g503"; # protein sequence = [MGCQCWIQVSEDVRLKFGDKMIEGIFIGYEENRIGWRVRDTQGKDHFSDQVVFNESQFGRLHGPKPSKSTKPTSDSST # TGMTPIHNPIPPKGSRPQRTIKLTERGKEWRDGIRKRDELIAERRVQNGLQPNHTTQIESDITACSLACRITEDNFSCLDDDTDIFFAALANIPQPLN # PIPTKSTTTSKPKTFDLKKPPSTRRQMLLQPDATLACSRRQGNYWIIRNGCI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g503 ### # start gene g504 Scaffold_1 AUGUSTUS gene 2516284 2517071 0.54 + . g504 Scaffold_1 AUGUSTUS transcript 2516284 2517071 0.54 + . g504.t1 Scaffold_1 AUGUSTUS start_codon 2516284 2516286 . + 0 transcript_id "g504.t1"; gene_id "g504"; Scaffold_1 AUGUSTUS CDS 2516284 2516503 0.82 + 0 transcript_id "g504.t1"; gene_id "g504"; Scaffold_1 AUGUSTUS CDS 2516659 2517071 0.65 + 2 transcript_id "g504.t1"; gene_id "g504"; Scaffold_1 AUGUSTUS stop_codon 2517069 2517071 . + 0 transcript_id "g504.t1"; gene_id "g504"; # protein sequence = [MPPKTQAQSRANSEENTFFTTAQSFASFSDSISAIGQPRRHNRGFGPATVPITSTLPEAMEEEEQFEYSTLYTESPRD # LPPHFDLDAGDHDDQDPPVDNDDLDNDSGGLLHGEPGDPSGPGGPRSPISPNIPNEQRAMLELLLGFKVSIETLGTILAALGRPSDNSESKSKVKERQ # RYSMVQTPENSRRSSSISPWSSMTVPSISPTNGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g504 ### # start gene g505 Scaffold_1 AUGUSTUS gene 2517918 2519345 0.81 + . g505 Scaffold_1 AUGUSTUS transcript 2517918 2519345 0.81 + . g505.t1 Scaffold_1 AUGUSTUS start_codon 2517918 2517920 . + 0 transcript_id "g505.t1"; gene_id "g505"; Scaffold_1 AUGUSTUS CDS 2517918 2518908 0.82 + 0 transcript_id "g505.t1"; gene_id "g505"; Scaffold_1 AUGUSTUS CDS 2519038 2519345 0.81 + 2 transcript_id "g505.t1"; gene_id "g505"; Scaffold_1 AUGUSTUS stop_codon 2519343 2519345 . + 0 transcript_id "g505.t1"; gene_id "g505"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASQNITFRNTSHFGSPQTSVPSATNTVDAKVAV # PLLEPLPSVLPTILETPPGDSSRTRSRTLRAKPLSSKFPFEPIYSYPMVSQFAAQLETPEVDIALVSAAVFNRACKDASMEPILLRAIYSEVAARAAD # RSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAINPSSSPHGAPVLFVSKK # DGKLRHCVDFCSLNHITKKDHYLLPLISDLLDTPKRAKIYTKLDLAHAYHLVRIAEDVCVIVYLDDILIYSDTPEEHREHIKEVLWHLRKHRLYANPD # KCEFTMDTVEYLGYILSPDGLTMSKEKVQTLMQKQDDGQWHPVAFRSASMQPAETKLRDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g505 ### # start gene g506 Scaffold_1 AUGUSTUS gene 2521307 2522041 0.67 + . g506 Scaffold_1 AUGUSTUS transcript 2521307 2522041 0.67 + . g506.t1 Scaffold_1 AUGUSTUS start_codon 2521307 2521309 . + 0 transcript_id "g506.t1"; gene_id "g506"; Scaffold_1 AUGUSTUS CDS 2521307 2522041 0.67 + 0 transcript_id "g506.t1"; gene_id "g506"; Scaffold_1 AUGUSTUS stop_codon 2522039 2522041 . + 0 transcript_id "g506.t1"; gene_id "g506"; # protein sequence = [MELHYTSGYHPEVDGQTLRVNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRAE # VDMKSDLARDFVVNLDELHAFLQREILLAQSCYKNKLTGKESRTRSSRSAPKYLFLLSTFALLVLLKNSLKNILVLSRSSVDLVLVLRAQAPGLSSPH # SPGFPRLTAGAGYAESFPNRTQSPPPPIEVDGEEEYNVAEILTPSWTEGINVVLYVITFGGPVTRYRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g506 ### # start gene g507 Scaffold_1 AUGUSTUS gene 2525383 2525805 1 - . g507 Scaffold_1 AUGUSTUS transcript 2525383 2525805 1 - . g507.t1 Scaffold_1 AUGUSTUS stop_codon 2525383 2525385 . - 0 transcript_id "g507.t1"; gene_id "g507"; Scaffold_1 AUGUSTUS CDS 2525383 2525805 1 - 0 transcript_id "g507.t1"; gene_id "g507"; Scaffold_1 AUGUSTUS start_codon 2525803 2525805 . - 0 transcript_id "g507.t1"; gene_id "g507"; # protein sequence = [MQQFFRLIHAEEEIDWIHIEICHLLTYICEEERVLGAKAAEVEGENPALVLQIREYWDERARFNDLHWRSLIAIKRLR # GFNIAHSKDFTVGTPVAAQDALVENADCDPELWDEGEDGNEDDEEILHDCVATVMDLAVNDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g507 ### # start gene g508 Scaffold_1 AUGUSTUS gene 2536751 2537425 0.54 + . g508 Scaffold_1 AUGUSTUS transcript 2536751 2537425 0.54 + . g508.t1 Scaffold_1 AUGUSTUS start_codon 2536751 2536753 . + 0 transcript_id "g508.t1"; gene_id "g508"; Scaffold_1 AUGUSTUS CDS 2536751 2537425 0.54 + 0 transcript_id "g508.t1"; gene_id "g508"; Scaffold_1 AUGUSTUS stop_codon 2537423 2537425 . + 0 transcript_id "g508.t1"; gene_id "g508"; # protein sequence = [MLTTNPGHWALLGPRVVYLYIGCSYLLYFLSFDLVYSTWFSPRTLLASLITPPPKAFLSVAPGDTCYWNQLLTPVLAN # GRAQENAAGATSDATLPDMQDPCAVSMPTAQCDHSTANLSPSNDADSPLHLPLKKKRSGMGQADKAALACAEKLLLDLEGFLISQNELRAKVAEENNV # TVARVATLLNQVSARNSTKKASNYNVLVFLKTQELNASKCCPMLAISL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g508 ### # start gene g509 Scaffold_1 AUGUSTUS gene 2550420 2551346 0.91 - . g509 Scaffold_1 AUGUSTUS transcript 2550420 2551346 0.91 - . g509.t1 Scaffold_1 AUGUSTUS stop_codon 2550420 2550422 . - 0 transcript_id "g509.t1"; gene_id "g509"; Scaffold_1 AUGUSTUS CDS 2550420 2551346 0.91 - 0 transcript_id "g509.t1"; gene_id "g509"; Scaffold_1 AUGUSTUS start_codon 2551344 2551346 . - 0 transcript_id "g509.t1"; gene_id "g509"; # protein sequence = [MAETGAVLVVTTKGAVDNDRGMTGTPWIWDNDCQEAFENLKIAFTSAPILTHWEPKRPIIVETDASDYAIAAILSIQT # VDSEIHPLAFLSKTLHAAELNYDTHNKELLTIFEAFKAWRHYLEGSGNPVDVVTDHKNLDYFSTTKILTRRQVRWSEYLHQFNMVICFRPGKLGKKPD # SITRRWDVYPKEGDIGYAQANPHNFRPIFTNEQLTTSLRATFLEGTMLRASIVMDIEALHQAIILTLPKDLSSVVDLELAKDPSNERWSLGSDRLLHL # DDRIYVPNHGDLRLQVLRYFHDHPLSDHLARTTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g509 ### # start gene g510 Scaffold_1 AUGUSTUS gene 2558591 2559932 0.38 + . g510 Scaffold_1 AUGUSTUS transcript 2558591 2559932 0.38 + . g510.t1 Scaffold_1 AUGUSTUS start_codon 2558591 2558593 . + 0 transcript_id "g510.t1"; gene_id "g510"; Scaffold_1 AUGUSTUS CDS 2558591 2558724 0.81 + 0 transcript_id "g510.t1"; gene_id "g510"; Scaffold_1 AUGUSTUS CDS 2558835 2558873 0.44 + 1 transcript_id "g510.t1"; gene_id "g510"; Scaffold_1 AUGUSTUS CDS 2559005 2559932 0.65 + 1 transcript_id "g510.t1"; gene_id "g510"; Scaffold_1 AUGUSTUS stop_codon 2559930 2559932 . + 0 transcript_id "g510.t1"; gene_id "g510"; # protein sequence = [MEHTYDWEIEKPLIKTDHEMISVKYASTLAPNMGKGRWVMPTHILMDKVQKQFCNPCLLLEKRQSTAATNTKVKNQIY # NETILRHWTTKNREQKPKDLIWRLRPTNGPPGDTDNNDVEKTFKTDSRRMAEMMKRHHEHMQQGEPAINEEIQDQITEQTLNRITTKMSEENHELLRK # LLTDEDVAKALRLSANYKAPGINGITYEIWRIIQGRYANAQAHGQEASNIIQTLRRIFNDIELNSMAPKTGLSESWLCPLYKKNDRTIMANYRPISLL # NSDYKIMTKALTMKLATTVPDLINPAQAGFVPGRHIYDQIWLSKLVIDLAEVTEQDGAPIALVAASFFCTTTSLTPDARCDKYHLNSPGKSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g510 ### # start gene g511 Scaffold_1 AUGUSTUS gene 2561823 2562083 0.48 + . g511 Scaffold_1 AUGUSTUS transcript 2561823 2562083 0.48 + . g511.t1 Scaffold_1 AUGUSTUS start_codon 2561823 2561825 . + 0 transcript_id "g511.t1"; gene_id "g511"; Scaffold_1 AUGUSTUS CDS 2561823 2562083 0.48 + 0 transcript_id "g511.t1"; gene_id "g511"; Scaffold_1 AUGUSTUS stop_codon 2562081 2562083 . + 0 transcript_id "g511.t1"; gene_id "g511"; # protein sequence = [MTRLNWVKGHSGIDGNEKADELANEGRLKTEPNDINLEIKPELNTTGIKLSKITQSLAEKGIKQARAKTETYQNKINR # RETKINLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g511 ### # start gene g512 Scaffold_1 AUGUSTUS gene 2567514 2568164 0.84 + . g512 Scaffold_1 AUGUSTUS transcript 2567514 2568164 0.84 + . g512.t1 Scaffold_1 AUGUSTUS start_codon 2567514 2567516 . + 0 transcript_id "g512.t1"; gene_id "g512"; Scaffold_1 AUGUSTUS CDS 2567514 2568164 0.84 + 0 transcript_id "g512.t1"; gene_id "g512"; Scaffold_1 AUGUSTUS stop_codon 2568162 2568164 . + 0 transcript_id "g512.t1"; gene_id "g512"; # protein sequence = [MSTPAQTTSADELMTQLIKQVANLATAMEECSSSKSSMNKPEVFKGKDSNEARRFRAQFQNWASEQPDLANSQVKLIK # SALGFFTEGAGDWATPHLLHFSLENPPCEGSWEKFLKEFGQQFESIDPGMEARNAIQSLKQGKGQTVAEFAQKFQDIGSRTEMSDIDLKERFYSALLP # EIRQNLITVNIGQGAARTLKEAITRAISVDVYLHDPTLTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g512 ### # start gene g513 Scaffold_1 AUGUSTUS gene 2573634 2574305 0.71 + . g513 Scaffold_1 AUGUSTUS transcript 2573634 2574305 0.71 + . g513.t1 Scaffold_1 AUGUSTUS start_codon 2573634 2573636 . + 0 transcript_id "g513.t1"; gene_id "g513"; Scaffold_1 AUGUSTUS CDS 2573634 2574305 0.71 + 0 transcript_id "g513.t1"; gene_id "g513"; Scaffold_1 AUGUSTUS stop_codon 2574303 2574305 . + 0 transcript_id "g513.t1"; gene_id "g513"; # protein sequence = [MESQNATQWRMQPHDIIWITQMALGIHNEVHSVCMEQDTKEGKWYDFSMGEMIWHNPDISNFHIFGIMVYVKHEKEPG # KLNPQAQEGRWVGIKPESNGYFIYWPDHQTVSTEYNVQFSDKQIRPVEGEDQDLRNLAVTKSEQPIIPVPEEIAKPINPDVTTRKLTKKIQDIINRLG # ERNQELRHLTASLGKVTGEIIADPTSVAEAMRCPDWPQWWEAMNEKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g513 ### # start gene g514 Scaffold_1 AUGUSTUS gene 2582817 2583212 0.96 - . g514 Scaffold_1 AUGUSTUS transcript 2582817 2583212 0.96 - . g514.t1 Scaffold_1 AUGUSTUS stop_codon 2582817 2582819 . - 0 transcript_id "g514.t1"; gene_id "g514"; Scaffold_1 AUGUSTUS CDS 2582817 2583212 0.96 - 0 transcript_id "g514.t1"; gene_id "g514"; Scaffold_1 AUGUSTUS start_codon 2583210 2583212 . - 0 transcript_id "g514.t1"; gene_id "g514"; # protein sequence = [MTSPEPNSRANHPDKRAEFAEAEIELHSDEEDGEDSEGCEDWEKNIDDDDDSDSGDDDLEVDEEEEIEGNDGDPVGLD # AAVALLLSINNDSQEVSEILRNVQSEAKVNGPRPCLEKFLDNVSPKTQGIYNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g514 ### # start gene g515 Scaffold_1 AUGUSTUS gene 2592435 2592842 0.96 + . g515 Scaffold_1 AUGUSTUS transcript 2592435 2592842 0.96 + . g515.t1 Scaffold_1 AUGUSTUS start_codon 2592435 2592437 . + 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_1 AUGUSTUS CDS 2592435 2592842 0.96 + 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_1 AUGUSTUS stop_codon 2592840 2592842 . + 0 transcript_id "g515.t1"; gene_id "g515"; # protein sequence = [MSTNQVNVPIFPEESKLTGKDSWSRFKAAVELTAQLRGYTGYLDGTIVKPASSLYSSAAGSIYPPVTATPAYSTTPYP # EEWYMRDRFVAATINLNTVDTTGLGIDLAKSATNIWKDLTEKFERKDEQLIYLADHA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g515 ### # start gene g516 Scaffold_1 AUGUSTUS gene 2592875 2594116 0.47 + . g516 Scaffold_1 AUGUSTUS transcript 2592875 2594116 0.47 + . g516.t1 Scaffold_1 AUGUSTUS start_codon 2592875 2592877 . + 0 transcript_id "g516.t1"; gene_id "g516"; Scaffold_1 AUGUSTUS CDS 2592875 2594116 0.47 + 0 transcript_id "g516.t1"; gene_id "g516"; Scaffold_1 AUGUSTUS stop_codon 2594114 2594116 . + 0 transcript_id "g516.t1"; gene_id "g516"; # protein sequence = [MEDHEKKMKNLKKKLTDVGGTLTDAQFRIIILASVPTDWKPETRNVPGKGSDEAFIHLYTVYLECKSKSNEIEQSNKV # RALIAKEIMAAMPAQSQSTIAATTGTRHERLICSNPPCPSKIGHTLKKCWAKGGGCEGKAPAWWYKKHNQEPPTTANSTSPIETFTLSARTSHSTSTQ # KLPDSQQNRNSRSILNQTMSQGDKGSSRDLPVSFRKPISFDGCTVFSSNKLFPCHKPVRTYIDSGTSEHCWVDRDDFIVYQAVVNQAGLTAVAGSSFR # IEGVGTVEFRTRVGGKDKIVKLTGVKHMPLFGHNLISLMTLDHKGLRGDWGGRRINVADRDGIILLTGTGSESTSGTAGGSTGEIRYISEFRPFAREG # SQYTHLASSSGTRRDSTYSSDVKQEPCRWFKNHVKEGGGHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g516 ### # start gene g517 Scaffold_1 AUGUSTUS gene 2595573 2596574 0.43 + . g517 Scaffold_1 AUGUSTUS transcript 2595573 2596574 0.43 + . g517.t1 Scaffold_1 AUGUSTUS start_codon 2595573 2595575 . + 0 transcript_id "g517.t1"; gene_id "g517"; Scaffold_1 AUGUSTUS CDS 2595573 2596574 0.43 + 0 transcript_id "g517.t1"; gene_id "g517"; Scaffold_1 AUGUSTUS stop_codon 2596572 2596574 . + 0 transcript_id "g517.t1"; gene_id "g517"; # protein sequence = [MEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKSQAKLIKSALGFFTESAGDWATPHLLHFNAEHPP # FGGDWEEFLKEFVQRFESVDPGMEARSEIKNLKQVKGQTVAEFAQKFKDIGDRTGMSDIDLRERFFTALLPEIRQNLIIVNIAQGLAPTLKEASNEPY # RGRLHACPTMTGRLWTRSHTYCSTTPADPHAMDIDATHTSNGNTREAFLARARTMLRLWCPRSCQAKLPTPRNHLPLLWTPRTSGSSLPRQVHGTRTR # PRPTPATSTPADIRYGPTPFSLFPNESVQIASSTPTSALQPYLLLRAPLTRTSPTRLVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g517 ### # start gene g518 Scaffold_1 AUGUSTUS gene 2607151 2607880 0.25 - . g518 Scaffold_1 AUGUSTUS transcript 2607151 2607880 0.25 - . g518.t1 Scaffold_1 AUGUSTUS stop_codon 2607151 2607153 . - 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_1 AUGUSTUS CDS 2607151 2607713 0.72 - 2 transcript_id "g518.t1"; gene_id "g518"; Scaffold_1 AUGUSTUS CDS 2607754 2607880 0.3 - 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_1 AUGUSTUS start_codon 2607878 2607880 . - 0 transcript_id "g518.t1"; gene_id "g518"; # protein sequence = [MDTVEYLGYILSPDGLTMFKEKVQTILEWPVPRKVKDIQSLLVIRCADDSAYPERCSLDLDNDCQEAFENLKIAFTSA # PILAHWKPNRPIIVETGASDYAIAEILSIQTVDGEIHPLAFLFFEAFKAWRHYLEGSGDLVDVVTDHKNLEYFSTTKILTRRQVHWSEYLHQFNMVIR # FRPGKLGEKPDSITRRWTSIPKRGISATRKSTLTTSDLSSLMSNSLLLFELPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g518 ### # start gene g519 Scaffold_1 AUGUSTUS gene 2608243 2609142 0.93 - . g519 Scaffold_1 AUGUSTUS transcript 2608243 2609142 0.93 - . g519.t1 Scaffold_1 AUGUSTUS stop_codon 2608243 2608245 . - 0 transcript_id "g519.t1"; gene_id "g519"; Scaffold_1 AUGUSTUS CDS 2608243 2609142 0.93 - 0 transcript_id "g519.t1"; gene_id "g519"; Scaffold_1 AUGUSTUS start_codon 2609140 2609142 . - 0 transcript_id "g519.t1"; gene_id "g519"; # protein sequence = [MANITIRFPSGELLLLPFYVTHLDLSCKAVLGYSFLSCYNPLIDWASRNITFYNTSHFDSPQTSVPSATNTVDAKVAV # PLPELSPSVLPTIQETPSGDSPRSRSRTLQAKPLLSKFPFEPIYSYPMVSQFAAQLETPEVDIALVSAAVFNRACKDASMEPILLRAIHSEVAARAAD # CSSTTPTVPPLHHSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLATGAITPSSSRHSAPVLFSPRR # TGNFGFAWTSAVSTVLPRRTAIPCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g519 ### # start gene g520 Scaffold_1 AUGUSTUS gene 2613713 2615041 0.55 - . g520 Scaffold_1 AUGUSTUS transcript 2613713 2615041 0.55 - . g520.t1 Scaffold_1 AUGUSTUS stop_codon 2613713 2613715 . - 0 transcript_id "g520.t1"; gene_id "g520"; Scaffold_1 AUGUSTUS CDS 2613713 2614857 0.99 - 2 transcript_id "g520.t1"; gene_id "g520"; Scaffold_1 AUGUSTUS CDS 2614960 2615041 0.55 - 0 transcript_id "g520.t1"; gene_id "g520"; Scaffold_1 AUGUSTUS start_codon 2615039 2615041 . - 0 transcript_id "g520.t1"; gene_id "g520"; # protein sequence = [MEEEQQFEYSTLYTGDGEPVQVLTPRRESPHDPPPHFDLDAGDHDDQDPPVDPDDLCAATTITTIWMTTLAVYRVVSL # VDLVDPIPQRATCYLELLSGFKGFIETLGTILAALGRPSDSSESKSKVKEPEVFDGSDPQKLKTFFVNVALVFNDRPKYFTDQWKVNYTLSYLSESAK # EWFVPDILDPDLDALPAWTSSFKLWSWSSRTISRVYDAQGEAKDSLGDLKMKETENIWKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMVCLP # EPATLADYRQEVLRIDNRYWKREAGKPFIAQNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTLKPKPFSGGKPNNNGKPQNPSNSGQSGSQRPAFNHLG # ADGKVLPSEKERGMKNNLCLFCGGKHQIADCNKRKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g520 ### # start gene g521 Scaffold_1 AUGUSTUS gene 2620206 2620874 0.32 + . g521 Scaffold_1 AUGUSTUS transcript 2620206 2620874 0.32 + . g521.t1 Scaffold_1 AUGUSTUS start_codon 2620206 2620208 . + 0 transcript_id "g521.t1"; gene_id "g521"; Scaffold_1 AUGUSTUS CDS 2620206 2620874 0.32 + 0 transcript_id "g521.t1"; gene_id "g521"; Scaffold_1 AUGUSTUS stop_codon 2620872 2620874 . + 0 transcript_id "g521.t1"; gene_id "g521"; # protein sequence = [MQSRKKCAFHVNTVEYLGVIISPRGVSMDPEKVKAVMDWLRPRTVKELQAFLGFANFYRRFIDNYLGITKVFTKLLRK # DSVWNWTPQCSSAFELLKSAFSEAPVLGHYNLDLPVVLECDASDLAIAGILLQLDPETGEIHPIAFHARSMISTELNYDIYDKELLAIVDCFKQWRAY # CEGSRHQIQVYSDHNNLQYFSTTKQLTARQARWVELLSGYDFVINY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g521 ### # start gene g522 Scaffold_1 AUGUSTUS gene 2621575 2622564 0.57 + . g522 Scaffold_1 AUGUSTUS transcript 2621575 2622564 0.57 + . g522.t1 Scaffold_1 AUGUSTUS start_codon 2621575 2621577 . + 0 transcript_id "g522.t1"; gene_id "g522"; Scaffold_1 AUGUSTUS CDS 2621575 2622564 0.57 + 0 transcript_id "g522.t1"; gene_id "g522"; Scaffold_1 AUGUSTUS stop_codon 2622562 2622564 . + 0 transcript_id "g522.t1"; gene_id "g522"; # protein sequence = [MPSDITSDRGSLFVSQFWRELCRVLGIESRLSMAYHPQTDGQMEQANQSVEAYLRIYCSYDQDNWDLLLPIAESVYNN # TPNTTTSVSPFFANKGYHPKLSITLEQVQGAEVNKYASNLKELHTYLQERIRAANEVYAKYANQKRQDAPDWKEGDHVWLNMENVRTRRAMKKLDHKW # TSPYSILSKVGSHAYRMDLPGDLPKIHNVFHVDRLRPHFHDKFKQQTSPPPPIFVKGETEHFVEGILDSKPIKGKPKEVEYLVKWEGYDDNFNSWVGW # RGMAGSLELVKQWHKKHTRKRQLKEPLEPTGKAGKDDEEEVTGPTRRTGSEGRGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g522 ### # start gene g523 Scaffold_1 AUGUSTUS gene 2638368 2638742 1 + . g523 Scaffold_1 AUGUSTUS transcript 2638368 2638742 1 + . g523.t1 Scaffold_1 AUGUSTUS start_codon 2638368 2638370 . + 0 transcript_id "g523.t1"; gene_id "g523"; Scaffold_1 AUGUSTUS CDS 2638368 2638742 1 + 0 transcript_id "g523.t1"; gene_id "g523"; Scaffold_1 AUGUSTUS stop_codon 2638740 2638742 . + 0 transcript_id "g523.t1"; gene_id "g523"; # protein sequence = [MPSAVLDPANSTLHSFPSVTLAELRPRHEGLRSFVRTLGPDPLPDPALSSNLEVFDYSQFNSTNQNPAQIPVSITPRI # DSPSSSDKDIMTARLNESGNIELSSGKYGPRVKPTATLSPEDLDDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g523 ### # start gene g524 Scaffold_1 AUGUSTUS gene 2641612 2643416 0.39 + . g524 Scaffold_1 AUGUSTUS transcript 2641612 2643416 0.39 + . g524.t1 Scaffold_1 AUGUSTUS start_codon 2641612 2641614 . + 0 transcript_id "g524.t1"; gene_id "g524"; Scaffold_1 AUGUSTUS CDS 2641612 2642293 0.39 + 0 transcript_id "g524.t1"; gene_id "g524"; Scaffold_1 AUGUSTUS CDS 2642338 2643416 0.73 + 2 transcript_id "g524.t1"; gene_id "g524"; Scaffold_1 AUGUSTUS stop_codon 2643414 2643416 . + 0 transcript_id "g524.t1"; gene_id "g524"; # protein sequence = [MRCSSQSSSSVAPRTVALVVGKYHLTRDDADKDVDWSDGSLSPLPASRGNAVANIKQVSSSDEGDETPVTNKVRMSAM # PFELPHFVWSACLKSPTSELLHDLLIDDGCPFVLIRSNIVQNLELKQRSLHRPQQMSVAMSEGTPQIFEATHFCKLSLDDLSGGWTSRVVRALIAPFL # CYPMVLGIPFLAHNFLVTDYASRTVMDKTTGFDLMNPHIPSPPLPSLSPKEQKIVIVELQAYFVDHPLLHHSDPVLPINVAAAVRSRIDHLAALDELQ # KRGDLLKTRFADVLGDIPHINELPSDITCNISLKDANLMMQSRGYASPRKYREAWSVLIEKHLQAGQIRPSLSQFSSPAFLIPKSDPTALPRWVNDFR # KLNANTIPDRHPLPRIDSILADCAKGQIWGKMDMTDSFFQSRMSPESVPLVSVQTPLGQYEWLVMPQGLRNVPAVQQHRVTQALHEYIGRFCHVYLND # IIIWSKDADEHAHHVELILEALRKAKLYCNPKKCLFFQLELDFLGHHISHRGVEAQSSKCEAILHYPAPTSASKVRCFLGMVRFIAGYLTNLAEYTRI # LTPLTKKECEKMFALMDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g524 ### # start gene g525 Scaffold_1 AUGUSTUS gene 2653283 2654204 0.45 + . g525 Scaffold_1 AUGUSTUS transcript 2653283 2654204 0.45 + . g525.t1 Scaffold_1 AUGUSTUS start_codon 2653283 2653285 . + 0 transcript_id "g525.t1"; gene_id "g525"; Scaffold_1 AUGUSTUS CDS 2653283 2653568 0.47 + 0 transcript_id "g525.t1"; gene_id "g525"; Scaffold_1 AUGUSTUS CDS 2653672 2654204 0.85 + 2 transcript_id "g525.t1"; gene_id "g525"; Scaffold_1 AUGUSTUS stop_codon 2654202 2654204 . + 0 transcript_id "g525.t1"; gene_id "g525"; # protein sequence = [MLYFSTPIPIIDCCGRIIVVLAGQPGRDYPEELREAFGIMLKEGENAGLSSNAADGPHKCGAFPAYNQGVTMGMGNAH # PVVLNPRSMTQVLNCLMAAFGLWAPRVYAGYEKVYNTIHSNLELPENFPGVVFTAAAFNFGGEVWTFKHPDSLNWALGWCAIMALGDFDATCSAQIIL # WELKLVVDFPHTATILLPSAAITHSNTPVAYGDVRTSFTQYAAGAIFCWVENGCRTEEVFEKADPEGHTKMQGDKSTAYIRRLENLSTVDELLAKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g525 ### # start gene g526 Scaffold_1 AUGUSTUS gene 2659495 2660844 0.99 + . g526 Scaffold_1 AUGUSTUS transcript 2659495 2660844 0.99 + . g526.t1 Scaffold_1 AUGUSTUS start_codon 2659495 2659497 . + 0 transcript_id "g526.t1"; gene_id "g526"; Scaffold_1 AUGUSTUS CDS 2659495 2660844 0.99 + 0 transcript_id "g526.t1"; gene_id "g526"; Scaffold_1 AUGUSTUS stop_codon 2660842 2660844 . + 0 transcript_id "g526.t1"; gene_id "g526"; # protein sequence = [MTTKCPVVPTPENLGKPKGIGALEAGTWNHTGGKGPPNGNDEQVMARQTKAEIFAVSQAPEPLPFADPAMFFPAVPVN # LSLQGAIDIRNGLEEDDDGLSAAILASDLEQVKTLMDAYLKTIPEDEVTAASTITYRLALELTALARVPANEQYSAEKTSFTPDELSAYLIKTDREGY # LGALYHAAYRLRRLATDIPPETCVFYLHRFTEEVDTFQRHVKTVEAARFQAAKTKILNMVVGSKVGRENTQSSNSSLEQIQFSSDGRSGNLSNSSRIV # PSSEDVEKDRCSPQVPNRIEPDSLKDEICRDIAMTNHDENEGLSVEDGHKIPDYNYKGPRKFIRHNREGEVVPVGSSRSTEHSQEKDTEGLTVLDEDR # GPKTVLLSRKVKDCLDDIKLKVHHEVFELAVNTGCAPHSCFRYLNIGTFDTRAQDLHDVWSIWYAVHGEKKRPDGSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g526 ### # start gene g527 Scaffold_1 AUGUSTUS gene 2661622 2662897 0.6 + . g527 Scaffold_1 AUGUSTUS transcript 2661622 2662897 0.6 + . g527.t1 Scaffold_1 AUGUSTUS start_codon 2661622 2661624 . + 0 transcript_id "g527.t1"; gene_id "g527"; Scaffold_1 AUGUSTUS CDS 2661622 2661760 0.68 + 0 transcript_id "g527.t1"; gene_id "g527"; Scaffold_1 AUGUSTUS CDS 2661897 2662897 0.62 + 2 transcript_id "g527.t1"; gene_id "g527"; Scaffold_1 AUGUSTUS stop_codon 2662895 2662897 . + 0 transcript_id "g527.t1"; gene_id "g527"; # protein sequence = [MPFPQKFESSIGLSECLFINGVQTKDGFVAGVNRITDFSARDLSKIYEKNLSLSDQAALALVSDTEGTVIVKVADSQS # YRRTMQQGRLDRRKSEQDETEHDTALAALTHIPERCASTATATFPQRSEVAPTGLPSQTTLTRKLMCSPQPPTPVNPHAVSKTVVVLPPPIQKINRAQ # LHRRTRSQDDEEDQSRPSKKKKGLSSYDNSEQDAQSRVQAANSSAMVIAPTSKPLVSSSTATALGNSQSARVPSSRKLDKDVSGSPRRRKSFCLDDED # GQDDSALIAQAVDPRMILAPTLEPYAASSSSRYPKRTRVPSNPTLDRKPVFPPQPPTSASQRVLKKVRLLLPPIEQTNSAPLPCIMRSRDGDKDKVGS # WKKKRLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g527 ### # start gene g528 Scaffold_1 AUGUSTUS gene 2663742 2666326 0.73 + . g528 Scaffold_1 AUGUSTUS transcript 2663742 2666326 0.73 + . g528.t1 Scaffold_1 AUGUSTUS start_codon 2663742 2663744 . + 0 transcript_id "g528.t1"; gene_id "g528"; Scaffold_1 AUGUSTUS CDS 2663742 2665465 0.73 + 0 transcript_id "g528.t1"; gene_id "g528"; Scaffold_1 AUGUSTUS CDS 2665594 2666326 0.95 + 1 transcript_id "g528.t1"; gene_id "g528"; Scaffold_1 AUGUSTUS stop_codon 2666324 2666326 . + 0 transcript_id "g528.t1"; gene_id "g528"; # protein sequence = [MITTRSSPGEEKSSKDRKTEASDPNVPGDPNTSQSRLSDKSSSVLALTAPPTKPARNLEAVAAICEATGGSPELPDSL # EEDGTPGTSVVVHLDNKETTLNRDGPANISASSGIKPSYPISTVLAHNVASVNRDPDVVQEFIQDAATPYRELIAMKGRSRPDVQTEASDQDLDDSTT # PKSRSPVVVASSTSSASGAPCKSTADIQAVRGLIELADSLEEDGALSTTMCPDNRVGREETITQYQYGLANISTSSTIIPSYPTPSGTDENSSVDEDQ # CIFEGSVQACTTEHENHIELCGRSHQDTPTGDPEDLDDCSTSKLRSSVVVASSTSSAPGAPGNSSRDIQAAGGSVELVDSCGIDSTLGNSNLVCSNHN # IGWKEKRDGPANTSVSSSIEQAYPSSKTLGQNVAVAFSNQSTECEQDRGLGVEEKGESSVCTKDREIHAASGIMIKDTEHEGSGESSELFHGGSLARV # VGKGEDVKTGTDTNDNCSEELHRNSEGKNIILGTKYNEDSKDEVEREKVVGVGRGKGRTKVENKEEQRSDTRSNRNTPALELTNRRIRAYYQYIVRTY # DETTFLAPSNLCISQGHPLTATERRNILNRSPAWISQQRKSLRPGQVTETGRLKRWASEDVELWEISEHGEISPKNANETKGRKRPKRYSSGGHQAGN # THKVEEDVNGEIDVAGVRRSDVCEGENGAVHTRVINEGGGNTKMEGEKVAGVDREKGQTKVGTENEEDHRNDSQDNRNVPPVLELTNPRIHAYYMYIV # RTHDEPTFLAYRTYSGLNRPPNPDIDDFILELANDLETIWFEVGATLHCWFLLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g528 ### # start gene g529 Scaffold_1 AUGUSTUS gene 2667984 2668442 0.89 - . g529 Scaffold_1 AUGUSTUS transcript 2667984 2668442 0.89 - . g529.t1 Scaffold_1 AUGUSTUS stop_codon 2667984 2667986 . - 0 transcript_id "g529.t1"; gene_id "g529"; Scaffold_1 AUGUSTUS CDS 2667984 2668442 0.89 - 0 transcript_id "g529.t1"; gene_id "g529"; Scaffold_1 AUGUSTUS start_codon 2668440 2668442 . - 0 transcript_id "g529.t1"; gene_id "g529"; # protein sequence = [MDNDNDPPATPRSAQRPSSQRMTRDANALVSAELSDSFNDARKGKYGLLNKSPRKSRDHEYPKMPTYANRVDSDRGYK # TRHKHTLQAAFWKPQRANASGSSAMSKTAACADILSSPSPFTCTPRSISHPTSDVIIISDSEEELSQYHVRGQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g529 ### # start gene g530 Scaffold_1 AUGUSTUS gene 2669968 2670363 0.96 - . g530 Scaffold_1 AUGUSTUS transcript 2669968 2670363 0.96 - . g530.t1 Scaffold_1 AUGUSTUS stop_codon 2669968 2669970 . - 0 transcript_id "g530.t1"; gene_id "g530"; Scaffold_1 AUGUSTUS CDS 2669968 2670363 0.96 - 0 transcript_id "g530.t1"; gene_id "g530"; Scaffold_1 AUGUSTUS start_codon 2670361 2670363 . - 0 transcript_id "g530.t1"; gene_id "g530"; # protein sequence = [MTSPEPNSRANHPDKRAEFAEAEIELHSDEEDGEDSEGCEDWEKNIDDDDDSDSGDDDLEVDEEEEIEGNDGDPVGLD # AAVALLLSINNDSQEVSEILRNVQSEAKVNGPRPCLEKFLDNVSPKTQGIYNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g530 ### # start gene g531 Scaffold_1 AUGUSTUS gene 2688005 2688879 0.49 + . g531 Scaffold_1 AUGUSTUS transcript 2688005 2688879 0.49 + . g531.t1 Scaffold_1 AUGUSTUS start_codon 2688005 2688007 . + 0 transcript_id "g531.t1"; gene_id "g531"; Scaffold_1 AUGUSTUS CDS 2688005 2688311 0.49 + 0 transcript_id "g531.t1"; gene_id "g531"; Scaffold_1 AUGUSTUS CDS 2688365 2688879 0.91 + 2 transcript_id "g531.t1"; gene_id "g531"; Scaffold_1 AUGUSTUS stop_codon 2688877 2688879 . + 0 transcript_id "g531.t1"; gene_id "g531"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFTNGLNQWTQVWKPVARSRTSDKVKGRQLQNLLRSSRISEIGLKCLILICRNASSLLYFQRSDNIFIVNIAQGIA # PTLKEAIKRAISVDVYLHDPTMTSRNTGHAPHTPLTLPLPTLMPWTLMLLTSALGIAGRPSLPVCADNALVVELKAMLSRIACTRRPPPGTVDAEDI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g531 ### # start gene g532 Scaffold_1 AUGUSTUS gene 2689977 2691302 0.81 + . g532 Scaffold_1 AUGUSTUS transcript 2689977 2691302 0.81 + . g532.t1 Scaffold_1 AUGUSTUS start_codon 2689977 2689979 . + 0 transcript_id "g532.t1"; gene_id "g532"; Scaffold_1 AUGUSTUS CDS 2689977 2691302 0.81 + 0 transcript_id "g532.t1"; gene_id "g532"; Scaffold_1 AUGUSTUS stop_codon 2691300 2691302 . + 0 transcript_id "g532.t1"; gene_id "g532"; # protein sequence = [MVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISS # PVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQAL # MNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGF # LGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQQEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQ # PAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDTPTSNSGAQHKTLPVDKPDGPSIYHGLIFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g532 ### # start gene g533 Scaffold_1 AUGUSTUS gene 2704481 2705433 0.89 - . g533 Scaffold_1 AUGUSTUS transcript 2704481 2705433 0.89 - . g533.t1 Scaffold_1 AUGUSTUS stop_codon 2704481 2704483 . - 0 transcript_id "g533.t1"; gene_id "g533"; Scaffold_1 AUGUSTUS CDS 2704481 2705240 1 - 1 transcript_id "g533.t1"; gene_id "g533"; Scaffold_1 AUGUSTUS CDS 2705414 2705433 0.89 - 0 transcript_id "g533.t1"; gene_id "g533"; Scaffold_1 AUGUSTUS start_codon 2705431 2705433 . - 0 transcript_id "g533.t1"; gene_id "g533"; # protein sequence = [MIYPISVRADHSFRSTSGQGGPKSTQILEFLVTNIESEDVILGLPWLHKVNPDINWRDGQIQIPAKLKVQHHVAIEEI # PEPKEPNVGGNTEQVLEPNRPESSGLTCPVPRTEPGLETTETGTSLRDEPVFEESGSPLYRLTGSRKRRRAWLRAGFIQEVTEELWCAAGYTYSQQLA # KAANKDKPQKTFEEMVPEPYRHHAKVFSEKESKRLPEHTPWDHAIDLKPDAPETLRTKIYPMSVNEQKELDRFLEDNLWKGYI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g533 ### # start gene g534 Scaffold_1 AUGUSTUS gene 2709157 2709486 0.96 - . g534 Scaffold_1 AUGUSTUS transcript 2709157 2709486 0.96 - . g534.t1 Scaffold_1 AUGUSTUS stop_codon 2709157 2709159 . - 0 transcript_id "g534.t1"; gene_id "g534"; Scaffold_1 AUGUSTUS CDS 2709157 2709486 0.96 - 0 transcript_id "g534.t1"; gene_id "g534"; Scaffold_1 AUGUSTUS start_codon 2709484 2709486 . - 0 transcript_id "g534.t1"; gene_id "g534"; # protein sequence = [MSTSQTITTTNSSTTGPIPPAPADPAIREDEDLEDGDKEGILRWAQERVQPVRVRKAAEAARKEAEEKAARAAAAKKK # AAQEERARALWAQQQEAEVAKRRRLLADAVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g534 ### # start gene g535 Scaffold_1 AUGUSTUS gene 2711364 2713952 0.27 - . g535 Scaffold_1 AUGUSTUS transcript 2711364 2713952 0.27 - . g535.t1 Scaffold_1 AUGUSTUS stop_codon 2711364 2711366 . - 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_1 AUGUSTUS CDS 2711364 2713745 1 - 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_1 AUGUSTUS CDS 2713794 2713952 0.27 - 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_1 AUGUSTUS start_codon 2713950 2713952 . - 0 transcript_id "g535.t1"; gene_id "g535"; # protein sequence = [MRAVTEPGFLPLFIFDGPLRPDIKRRKQINKSANKLVTGMQDMIEAFGFEYRTAPGEAEAELAFLNRIGLIDGILSDD # VDNFLFGAHTVIRNRSSTHAGAKSTIEKAKVYTYTLPHPAFPDLNRENLIFIALCSGGDYGTGLDNCGIKISYGLARAGFGKQLCQAALNHDQNSDQL # KNFLKHWKSELTQELRTNASGFLPRKSPKLASTIPDSFPEIDVLLAYMRPITSESLGCSKHYDDLLINDGWLKKDPSLPLLAEKCEFYFEWGILQSII # KRFRTVIFHGVTLRIMRRAHIREQTSDAKSIDLEVIRAHFAAGGYAVEDMDSPCPEFIKDISISRTHESTSKTLEYRVAINPTILVQLAAHGVKGIRR # PEDKDKWSEFKEVENKSSDEGRTKKKEYLADPMLPLKLWLPAVLVREAVPGLVEAHEEVWKQKEKKAGKIRKGKASSQLTLKTDQVLSSVDSSDDDAS # CLFIPSRPAHPTTHLQKDHISRIPRSTLPDLSSSNHPSLSSSSVSRHQTLNCSGSSSSNADVPGGDNLLSAIDHIAMQNMNKKDETHKFHRFGSSLPK # KITPQPFPVSMEISFNEKSDDFGDPFNTDYVHSPPGPPQTPSPQKKTRKTNIVSSDSSLSEENTSPRQDKVGVLNKSPRKSKDHRYPKGLDYGNHADG # KQARKTIYDIPQHSRAALTASPTPMRYTPNISMSTSTSTSTITKAAVPARIPSSTQLLTSFSTHRLPSVSAPKIGPIIIFDSEDEVEEQKSLLPAVVP # MSTNKTRRSPKPTAATMSDIPKTHFVNKLGGSRTLKTSRKNLSDTADIDLLSLLRPRTEGQDSRSMAAKTMADIIELSDNSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g535 ### # start gene g536 Scaffold_1 AUGUSTUS gene 2716071 2717507 0.95 + . g536 Scaffold_1 AUGUSTUS transcript 2716071 2717507 0.95 + . g536.t1 Scaffold_1 AUGUSTUS start_codon 2716071 2716073 . + 0 transcript_id "g536.t1"; gene_id "g536"; Scaffold_1 AUGUSTUS CDS 2716071 2717507 0.95 + 0 transcript_id "g536.t1"; gene_id "g536"; Scaffold_1 AUGUSTUS stop_codon 2717505 2717507 . + 0 transcript_id "g536.t1"; gene_id "g536"; # protein sequence = [MVGPGSFDNPGYVAEHCNNNLSDNEVSSSSLPHSTPPASIPSSMQIISSCLFGNSMSGVKCSMFFSEHPNFSACAELH # GLEMMGLLSHRQRQNAVIYHILSGHCFLNCHLNTTSACRMFAADFSSETDFFDRVDSMISQSKANALPVAKLKQIMEALNIQEHILPNQPRHQMLNYI # HRYINRFSAASSECVVRDLPLSVEHIFKDFHRLRFSILLRYCRMHNIEVNVFTATSEELRIQLASHVLSAKCHSNATVFPENVCPSGCCYIARTFHSQ # TSDFQPGNESISEFRFMLTHLLSNKLSLGTLRSVLQILEVPFKDDDNKCTLRLRLQEFNGSDQYDFQGAVQRKKLCSLRAAWPVLVSESLKKKFIHNF # QLHTSSQAMNHSVCAACLSQELSSSCHVVTSDSVDLSLLNTPDTRAQPTCPSVVVDSTWLNGDCIPPTFKPVLDQNPYALLDEQGVSFNDLGESCPSL # CRSCYSAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g536 ### # start gene g537 Scaffold_1 AUGUSTUS gene 2719060 2719398 1 + . g537 Scaffold_1 AUGUSTUS transcript 2719060 2719398 1 + . g537.t1 Scaffold_1 AUGUSTUS start_codon 2719060 2719062 . + 0 transcript_id "g537.t1"; gene_id "g537"; Scaffold_1 AUGUSTUS CDS 2719060 2719398 1 + 0 transcript_id "g537.t1"; gene_id "g537"; Scaffold_1 AUGUSTUS stop_codon 2719396 2719398 . + 0 transcript_id "g537.t1"; gene_id "g537"; # protein sequence = [MNSNESLTSGYAMSSDIPGEGPSIVSELDESIIFENVVIADVDANATINELCAAAMRHINCNGGSYVEIPHESGPMNE # FFNPSLFPMIYPMLFPYGIGGFEDYHRSESVSLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g537 ### # start gene g538 Scaffold_1 AUGUSTUS gene 2719859 2723090 0.49 + . g538 Scaffold_1 AUGUSTUS transcript 2719859 2723090 0.49 + . g538.t1 Scaffold_1 AUGUSTUS start_codon 2719859 2719861 . + 0 transcript_id "g538.t1"; gene_id "g538"; Scaffold_1 AUGUSTUS CDS 2719859 2721806 0.52 + 0 transcript_id "g538.t1"; gene_id "g538"; Scaffold_1 AUGUSTUS CDS 2722165 2723090 0.52 + 2 transcript_id "g538.t1"; gene_id "g538"; Scaffold_1 AUGUSTUS stop_codon 2723088 2723090 . + 0 transcript_id "g538.t1"; gene_id "g538"; # protein sequence = [MLVAKNPVIAAKFFNIYLKAFIRDLLGYDPNDKELTGGILGVVKGYYGCVEAQGRGTLHCHMMVWLEGGLNPNEIHEK # AVSDPDSPFCCRLIAFLDDTISNSVPAARSNCPIIPSTGFHPCSVRGMTMSGYHGYDSDSEDVLQQDLRNLVHSCQVHKHTATCYKYCKDSSKPKECR # FGLDDSNIDFESCFDPDTGELNLRCLDGLVNNFILRAIRCNMDIKFIGSGASAKAVLYYITNYITKSQLKAHVAYAALERAVRRLDEQCPEDSELTIC # AKKLFQKCAYSMISQQELSAQQVNTYLLDLEDHFTSHKYKNLYWVQIKNLVDNELPSPECQSAHKAFKSVLTTFTDGPVVTTNEALDGNLSSGICDEH # ESNDALAEDDEEVGIAVGVDGSLVAKASQADDYCYRPVSVEDLCLWEQVAQCKKLHKVWQNVNVIDFVDENEALEDSIEDCDEGSNSKDPVIIPTLNE # LLEHSSHEHPKFDFGRAHPEYSTHRFIVDSSFNRRVPVPIGPSLPHRDRESDWPKYCRLMLIFFKPWRNAADLRGPYLSWSEAFATFSVTCSDRVEQM # MDNMQIMHECKDSRDDHFLNRNSAHRLRNSRSYVGAGDEDRLIEDDFLAEHDNEPKILEHLLSIEGTQSQYVAKLRTEALSXQERVLRLIASYMQENK # PAPLRMFLGGPGGTGKLHVISALKVFFEQQGELRQFCLASYTGVAAQNISGMTLHSALLLSSTMSSHKTNSKSHQDLVALWQGVDYLFIYKVSMLGCR # FMLKISRALCRAKDNNLPFGGINIIFAGDFAQLAPIREQRLFSFINTARVGTSYGQEIVFGKLLWLSVKTVVLLTQVMRQSGLENEQFVGLLSWLRTG # VCTLDDYDILNAWIISTVQPNWSDAKWQNTPTIVSDNRIKDMINERSTAAFARRTGKPLYWYYASDTRGGKPVNDISLQSFLENMDSGQTNQRLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g538 ### # start gene g539 Scaffold_1 AUGUSTUS gene 2729761 2731276 0.39 - . g539 Scaffold_1 AUGUSTUS transcript 2729761 2731276 0.39 - . g539.t1 Scaffold_1 AUGUSTUS stop_codon 2729761 2729763 . - 0 transcript_id "g539.t1"; gene_id "g539"; Scaffold_1 AUGUSTUS CDS 2729761 2729940 0.77 - 0 transcript_id "g539.t1"; gene_id "g539"; Scaffold_1 AUGUSTUS CDS 2730024 2730420 0.85 - 1 transcript_id "g539.t1"; gene_id "g539"; Scaffold_1 AUGUSTUS CDS 2730984 2731276 0.53 - 0 transcript_id "g539.t1"; gene_id "g539"; Scaffold_1 AUGUSTUS start_codon 2731274 2731276 . - 0 transcript_id "g539.t1"; gene_id "g539"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWD # SAALKWAYGRGLAERIKDEMARLPEPATLADYRQEFFVLTIVIGNARKLESVRLPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNH # LGADGKSFPPRRKEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g539 ### # start gene g540 Scaffold_1 AUGUSTUS gene 2736877 2737654 0.22 + . g540 Scaffold_1 AUGUSTUS transcript 2736877 2737654 0.22 + . g540.t1 Scaffold_1 AUGUSTUS start_codon 2736877 2736879 . + 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_1 AUGUSTUS CDS 2736877 2737050 0.72 + 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_1 AUGUSTUS CDS 2737099 2737263 0.28 + 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_1 AUGUSTUS CDS 2737379 2737654 0.93 + 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_1 AUGUSTUS stop_codon 2737652 2737654 . + 0 transcript_id "g540.t1"; gene_id "g540"; # protein sequence = [MSKDKTSNNDNSFASPAKRNLKKRNFTSTKNDDSGDPLNNILPDESASKTLAFPTGMMIFAGAEYDHRLMPDFGGPVF # AMKKAKLIQPQWTNIRNKLIVPWKNYDPLRLGTLVIYHATITSLRVIAESDVIIMPPMPSVSDKKRISAQPIAPSAAASALASIDWCSTATSSSLSGS # DHTLDGEDPPKEGSEVITDGKQKKARKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g540 ### # start gene g541 Scaffold_1 AUGUSTUS gene 2748665 2749546 1 + . g541 Scaffold_1 AUGUSTUS transcript 2748665 2749546 1 + . g541.t1 Scaffold_1 AUGUSTUS start_codon 2748665 2748667 . + 0 transcript_id "g541.t1"; gene_id "g541"; Scaffold_1 AUGUSTUS CDS 2748665 2749546 1 + 0 transcript_id "g541.t1"; gene_id "g541"; Scaffold_1 AUGUSTUS stop_codon 2749544 2749546 . + 0 transcript_id "g541.t1"; gene_id "g541"; # protein sequence = [MFNFETITFLCLNHNQQVFVITSGSLQQIKLPRLVLLVEGVINNRLPISSWNQPDNLTLKAVQKDHQNSVSGPQGTPI # SCKEVGDQRSYKDVIATSTSNLSLPEQEQAKSTSVDKNSPIATSVAKDSTNVISTTAEGYKSTGNIDNISESSQSEDDDGQGPWTVVQPRRARSLGNL # KTIKLRKGIIRPTDLSQDQVNMIKEAEKTLTPAQKESVRKRAEKVKQSAHNEFASPIAGPSYVAKGKFTDNNKDVSDEELDLQFGMKSVMLKSRHQSR # RMSLVQRIQARIFSPPQAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g541 ### # start gene g542 Scaffold_1 AUGUSTUS gene 2752142 2752528 1 + . g542 Scaffold_1 AUGUSTUS transcript 2752142 2752528 1 + . g542.t1 Scaffold_1 AUGUSTUS start_codon 2752142 2752144 . + 0 transcript_id "g542.t1"; gene_id "g542"; Scaffold_1 AUGUSTUS CDS 2752142 2752528 1 + 0 transcript_id "g542.t1"; gene_id "g542"; Scaffold_1 AUGUSTUS stop_codon 2752526 2752528 . + 0 transcript_id "g542.t1"; gene_id "g542"; # protein sequence = [MPDSESSSSSEEESEPLDSSPSSSSNSSSSDRDSDSESESEDSNLDLTNKSSEDTKPRKSKHCKSRSPSRSQKGKHKD # KKCQQAKWAKAAKRLIKPILLNEYDGSADAEKYHCFVLQYCKEGHVPEDK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g542 ### # start gene g543 Scaffold_1 AUGUSTUS gene 2752816 2753517 0.38 + . g543 Scaffold_1 AUGUSTUS transcript 2752816 2753517 0.38 + . g543.t1 Scaffold_1 AUGUSTUS start_codon 2752816 2752818 . + 0 transcript_id "g543.t1"; gene_id "g543"; Scaffold_1 AUGUSTUS CDS 2752816 2752991 0.38 + 0 transcript_id "g543.t1"; gene_id "g543"; Scaffold_1 AUGUSTUS CDS 2753061 2753517 0.39 + 1 transcript_id "g543.t1"; gene_id "g543"; Scaffold_1 AUGUSTUS stop_codon 2753515 2753517 . + 0 transcript_id "g543.t1"; gene_id "g543"; # protein sequence = [MHYELHHTRLNKEVHTWEKIVQEAELIEMADLENELGVCLKDKSRVNHQDEYLDSRGQHRNNQNERSKNEDSSNLKIN # HSSSFQKKPGGHKDFAPKVQLSDEKKAQYDAQELYYGCGEKGHSSRNCPQKNTVQSNKKGPPGLQAHAMSYPTRDNEWLAQLAQTTEPAHEMLLNMIS # LEGWVYLVSIGLRWVWRRRPLGGCQMLVAGCPSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g543 ### # start gene g544 Scaffold_1 AUGUSTUS gene 2754371 2755144 0.58 + . g544 Scaffold_1 AUGUSTUS transcript 2754371 2755144 0.58 + . g544.t1 Scaffold_1 AUGUSTUS start_codon 2754371 2754373 . + 0 transcript_id "g544.t1"; gene_id "g544"; Scaffold_1 AUGUSTUS CDS 2754371 2755144 0.58 + 0 transcript_id "g544.t1"; gene_id "g544"; Scaffold_1 AUGUSTUS stop_codon 2755142 2755144 . + 0 transcript_id "g544.t1"; gene_id "g544"; # protein sequence = [MGSSHAKSRAWGVRETGGRKVHISPTPLKPSKGLRKTSEPGGMGSKEAGGKKWQRSSPATPPPPPPSRGLSDNDSKGS # NKREHTQSSRNGGKNDEDRAELPTGAPEVPPTHYDPDQPWYYDPRQGWHRKAAPRPSNEGWNTWESNEEKNQITIELKLDIGKIESFAGDDRSAWKTW # VLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQQLRGSIPVLRTGQNSNGSLVPNSDPSTKQMRQEGGWLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g544 ### # start gene g545 Scaffold_1 AUGUSTUS gene 2757226 2758738 0.87 + . g545 Scaffold_1 AUGUSTUS transcript 2757226 2758738 0.87 + . g545.t1 Scaffold_1 AUGUSTUS start_codon 2757226 2757228 . + 0 transcript_id "g545.t1"; gene_id "g545"; Scaffold_1 AUGUSTUS CDS 2757226 2757839 0.9 + 0 transcript_id "g545.t1"; gene_id "g545"; Scaffold_1 AUGUSTUS CDS 2757929 2758337 0.87 + 1 transcript_id "g545.t1"; gene_id "g545"; Scaffold_1 AUGUSTUS CDS 2758409 2758738 0.99 + 0 transcript_id "g545.t1"; gene_id "g545"; Scaffold_1 AUGUSTUS stop_codon 2758736 2758738 . + 0 transcript_id "g545.t1"; gene_id "g545"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDL # DTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPGGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAAL # GRPSDSSESKSKVKEPEVFDGSDPRKLKTGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFN # TLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSN # SGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g545 ### # start gene g546 Scaffold_1 AUGUSTUS gene 2759070 2759813 0.65 + . g546 Scaffold_1 AUGUSTUS transcript 2759070 2759813 0.65 + . g546.t1 Scaffold_1 AUGUSTUS start_codon 2759070 2759072 . + 0 transcript_id "g546.t1"; gene_id "g546"; Scaffold_1 AUGUSTUS CDS 2759070 2759813 0.65 + 0 transcript_id "g546.t1"; gene_id "g546"; Scaffold_1 AUGUSTUS stop_codon 2759811 2759813 . + 0 transcript_id "g546.t1"; gene_id "g546"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINPLLQRSLF # RYRNLRRRFHRQFWRPLLGTHSPRSRSRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSE # VAARAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEALRRLSAVFILCLKRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g546 ### # start gene g547 Scaffold_1 AUGUSTUS gene 2761170 2762635 0.56 + . g547 Scaffold_1 AUGUSTUS transcript 2761170 2762635 0.56 + . g547.t1 Scaffold_1 AUGUSTUS start_codon 2761170 2761172 . + 0 transcript_id "g547.t1"; gene_id "g547"; Scaffold_1 AUGUSTUS CDS 2761170 2761524 0.65 + 0 transcript_id "g547.t1"; gene_id "g547"; Scaffold_1 AUGUSTUS CDS 2761625 2761948 0.63 + 2 transcript_id "g547.t1"; gene_id "g547"; Scaffold_1 AUGUSTUS CDS 2762127 2762635 0.91 + 2 transcript_id "g547.t1"; gene_id "g547"; Scaffold_1 AUGUSTUS stop_codon 2762633 2762635 . + 0 transcript_id "g547.t1"; gene_id "g547"; # protein sequence = [MDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVLITAIFAFKSSLLSMIIHSSAISARTA # LSKLYVVNTPGPRSETLFVTTLPLALSVVAISPAVIGLTAFVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALG # KALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPYFRSPTQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGP # FKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVA # ADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g547 ### # start gene g548 Scaffold_1 AUGUSTUS gene 2768938 2769321 0.52 - . g548 Scaffold_1 AUGUSTUS transcript 2768938 2769321 0.52 - . g548.t1 Scaffold_1 AUGUSTUS stop_codon 2768938 2768940 . - 0 transcript_id "g548.t1"; gene_id "g548"; Scaffold_1 AUGUSTUS CDS 2768938 2769321 0.52 - 0 transcript_id "g548.t1"; gene_id "g548"; Scaffold_1 AUGUSTUS start_codon 2769319 2769321 . - 0 transcript_id "g548.t1"; gene_id "g548"; # protein sequence = [MIEAYIREVLGYTASPDRVPPPVEAPSSNAPLPATTFLVADDTRSVLGASIPTPRRTPLLLPGSLLPTSLHSPSAIPS # SPCVLNVPHEVVDLTMDDAEDLYELQEEFLAWTGGAVTVKQEMTESDIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g548 ### # start gene g549 Scaffold_1 AUGUSTUS gene 2772839 2773225 0.68 + . g549 Scaffold_1 AUGUSTUS transcript 2772839 2773225 0.68 + . g549.t1 Scaffold_1 AUGUSTUS start_codon 2772839 2772841 . + 0 transcript_id "g549.t1"; gene_id "g549"; Scaffold_1 AUGUSTUS CDS 2772839 2773225 0.68 + 0 transcript_id "g549.t1"; gene_id "g549"; Scaffold_1 AUGUSTUS stop_codon 2773223 2773225 . + 0 transcript_id "g549.t1"; gene_id "g549"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEFR # GPLQWNLGWDHHNGGLPPWVTPNLPVVPWEVSHTPLPGEREDLPLDRYRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g549 ### # start gene g550 Scaffold_1 AUGUSTUS gene 2778356 2779342 0.96 + . g550 Scaffold_1 AUGUSTUS transcript 2778356 2779342 0.96 + . g550.t1 Scaffold_1 AUGUSTUS start_codon 2778356 2778358 . + 0 transcript_id "g550.t1"; gene_id "g550"; Scaffold_1 AUGUSTUS CDS 2778356 2779342 0.96 + 0 transcript_id "g550.t1"; gene_id "g550"; Scaffold_1 AUGUSTUS stop_codon 2779340 2779342 . + 0 transcript_id "g550.t1"; gene_id "g550"; # protein sequence = [MGINEWLAFASESTEEEVEEILEAGRSAMEKVTPKPTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYP # DLPTLDIESLNIPKIPSRSGLTPKGSIRRNNFRRKQLIAGTHVVERKSDPTIQGKPISLIGAAGMDRLLREGTPAYFLHISPRRRSPLLKKCSGRVIA # APEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYDIKIETEGDAIPPIGKLYNMSEKELKSLK # EYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTCDSASTIEPEQDYERRIGTLYP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g550 ### # start gene g551 Scaffold_1 AUGUSTUS gene 2779677 2780588 0.88 + . g551 Scaffold_1 AUGUSTUS transcript 2779677 2780588 0.88 + . g551.t1 Scaffold_1 AUGUSTUS start_codon 2779677 2779679 . + 0 transcript_id "g551.t1"; gene_id "g551"; Scaffold_1 AUGUSTUS CDS 2779677 2780588 0.88 + 0 transcript_id "g551.t1"; gene_id "g551"; Scaffold_1 AUGUSTUS stop_codon 2780586 2780588 . + 0 transcript_id "g551.t1"; gene_id "g551"; # protein sequence = [MRFHVDTVEYLGVIISPLGVSMDPEKVKAVIDWPKPRTVKELQAFLGFANFYRRFIDNYSGITKVFTKLLRKDSVWNW # TPQCSSAFELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYDKELLAIVDCFKQWRAYCEGSRH # QIQVYSDHNNLQYFTTTKQLTARQARWAELLSGYDFVINYRPGRLGAKPDALTRRSDVYPKKGASRDQVLAGRERVLIPPERLNATILMNEDLLVNRV # REAPKDTTIIEALKRIARNEEESFVWEDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g551 ### # start gene g552 Scaffold_1 AUGUSTUS gene 2795716 2796530 0.34 - . g552 Scaffold_1 AUGUSTUS transcript 2795716 2796530 0.34 - . g552.t1 Scaffold_1 AUGUSTUS stop_codon 2795716 2795718 . - 0 transcript_id "g552.t1"; gene_id "g552"; Scaffold_1 AUGUSTUS CDS 2795716 2796002 0.71 - 2 transcript_id "g552.t1"; gene_id "g552"; Scaffold_1 AUGUSTUS CDS 2796056 2796530 0.39 - 0 transcript_id "g552.t1"; gene_id "g552"; Scaffold_1 AUGUSTUS start_codon 2796528 2796530 . - 0 transcript_id "g552.t1"; gene_id "g552"; # protein sequence = [MKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGLESTWLVNPPNRILTRDE # LIGYRAQALSKHNSFIEKVRRRVDAKKLQSYEDSNENIDIQLKIGISNQVNWSRLEILELKRVWIERCIQDIEDLWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g552 ### # start gene g553 Scaffold_1 AUGUSTUS gene 2796701 2798842 0.68 - . g553 Scaffold_1 AUGUSTUS transcript 2796701 2798842 0.68 - . g553.t1 Scaffold_1 AUGUSTUS stop_codon 2796701 2796703 . - 0 transcript_id "g553.t1"; gene_id "g553"; Scaffold_1 AUGUSTUS CDS 2796701 2797080 0.89 - 2 transcript_id "g553.t1"; gene_id "g553"; Scaffold_1 AUGUSTUS CDS 2797684 2798842 0.73 - 0 transcript_id "g553.t1"; gene_id "g553"; Scaffold_1 AUGUSTUS start_codon 2798840 2798842 . - 0 transcript_id "g553.t1"; gene_id "g553"; # protein sequence = [MTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRF # VWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSN # VPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHV # YGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEP # YQFDDFKDQIDPRVSQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPS # DESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRILINLINHN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g553 ### # start gene g554 Scaffold_1 AUGUSTUS gene 2799190 2801225 0.75 - . g554 Scaffold_1 AUGUSTUS transcript 2799190 2801225 0.75 - . g554.t1 Scaffold_1 AUGUSTUS stop_codon 2799190 2799192 . - 0 transcript_id "g554.t1"; gene_id "g554"; Scaffold_1 AUGUSTUS CDS 2799190 2800277 0.79 - 2 transcript_id "g554.t1"; gene_id "g554"; Scaffold_1 AUGUSTUS CDS 2800352 2801225 0.75 - 0 transcript_id "g554.t1"; gene_id "g554"; Scaffold_1 AUGUSTUS start_codon 2801223 2801225 . - 0 transcript_id "g554.t1"; gene_id "g554"; # protein sequence = [MRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIV # ESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLN # QTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDN # EKSTGENDSKGNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKS # FFLQNGRIKPKPVRKKVQKRRFVEPILQNFSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEK # VRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPD # EFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGPLKMNSFHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g554 ### # start gene g555 Scaffold_1 AUGUSTUS gene 2801812 2804558 0.91 - . g555 Scaffold_1 AUGUSTUS transcript 2801812 2804558 0.91 - . g555.t1 Scaffold_1 AUGUSTUS stop_codon 2801812 2801814 . - 0 transcript_id "g555.t1"; gene_id "g555"; Scaffold_1 AUGUSTUS CDS 2801812 2803780 0.96 - 1 transcript_id "g555.t1"; gene_id "g555"; Scaffold_1 AUGUSTUS CDS 2804542 2804558 0.92 - 0 transcript_id "g555.t1"; gene_id "g555"; Scaffold_1 AUGUSTUS start_codon 2804556 2804558 . - 0 transcript_id "g555.t1"; gene_id "g555"; # protein sequence = [MRLYILKTAYFEEFGESRSLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQ # SHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLR # DNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g555 ### # start gene g556 Scaffold_1 AUGUSTUS gene 2816512 2817525 0.13 - . g556 Scaffold_1 AUGUSTUS transcript 2816512 2817525 0.13 - . g556.t1 Scaffold_1 AUGUSTUS stop_codon 2816512 2816514 . - 0 transcript_id "g556.t1"; gene_id "g556"; Scaffold_1 AUGUSTUS CDS 2816512 2817222 0.96 - 0 transcript_id "g556.t1"; gene_id "g556"; Scaffold_1 AUGUSTUS CDS 2817313 2817525 0.13 - 0 transcript_id "g556.t1"; gene_id "g556"; Scaffold_1 AUGUSTUS start_codon 2817523 2817525 . - 0 transcript_id "g556.t1"; gene_id "g556"; # protein sequence = [MDYSELMGPSAPEHDLTPLEEHYATAYSAAELKTFHCDRVRKMPLSGLDPSMLIGFLCRDEKDWVDFRRRVDEAPSWA # ADSADNMGLESMSDPDEVDTMELEDEDEPSLDVSIQSRSRSASLSLSSVSQHGSAGGARSDRSKSEEIDTEEDPVDPITPGPSAARFDSSVVHVPLPG # DGHEKETSFDDASDDIEDDWVEPSIPSTPVHSSHGAQSSTDDSAGAVIAPAMKKTRSTSSGASKKKKPKKQIPVPVPKVKLPSTRESFPFPVATEDVS # AEGPISVSYSSSSSMSGAGDDSVGVGALIRENG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g556 ### # start gene g557 Scaffold_1 AUGUSTUS gene 2837256 2838143 0.99 - . g557 Scaffold_1 AUGUSTUS transcript 2837256 2838143 0.99 - . g557.t1 Scaffold_1 AUGUSTUS stop_codon 2837256 2837258 . - 0 transcript_id "g557.t1"; gene_id "g557"; Scaffold_1 AUGUSTUS CDS 2837256 2838143 0.99 - 0 transcript_id "g557.t1"; gene_id "g557"; Scaffold_1 AUGUSTUS start_codon 2838141 2838143 . - 0 transcript_id "g557.t1"; gene_id "g557"; # protein sequence = [MPIATACLQSWFAGAAARDGTSWRLAKGILSSALLSTAAQIERRENAKQLEWEKRVSEIRIVREKLEEELIRFRTVAR # MNVVKPYTDALDPVDSPISAEDSNHWNYEYNQLPSHRYLFNCYVYQYHLMRFADMLGELLDHVIRLETRPERRHRRVWTPKFHNLASVTVFLEWIKSV # WTDNDNVGRSASSGAEGEEGEEEDPDRVQHVDRDRRRDVELDELSDETRVGNGVVGDEEDNMYGMGLPYPKRRDPDALPPSNVGELMGRWIYKRIVGL # TTGNALYAVKAGVLTSKRWPT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g557 ### # start gene g558 Scaffold_1 AUGUSTUS gene 2840220 2840621 0.88 - . g558 Scaffold_1 AUGUSTUS transcript 2840220 2840621 0.88 - . g558.t1 Scaffold_1 AUGUSTUS stop_codon 2840220 2840222 . - 0 transcript_id "g558.t1"; gene_id "g558"; Scaffold_1 AUGUSTUS CDS 2840220 2840621 0.88 - 0 transcript_id "g558.t1"; gene_id "g558"; Scaffold_1 AUGUSTUS start_codon 2840619 2840621 . - 0 transcript_id "g558.t1"; gene_id "g558"; # protein sequence = [MTHKIKDLGISVDIRLPQNSKQIDAKDRATLTDLERVTQGSHGCTWMMEALEYLTKASQAKGTEVGLSEKEEEDARYW # IASKEGELGIASSCGKKIMRPVTAVNSPVHHAIVESPTEMDVDYFSPSSLQALND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g558 ### # start gene g559 Scaffold_1 AUGUSTUS gene 2845660 2846007 0.99 + . g559 Scaffold_1 AUGUSTUS transcript 2845660 2846007 0.99 + . g559.t1 Scaffold_1 AUGUSTUS start_codon 2845660 2845662 . + 0 transcript_id "g559.t1"; gene_id "g559"; Scaffold_1 AUGUSTUS CDS 2845660 2846007 0.99 + 0 transcript_id "g559.t1"; gene_id "g559"; Scaffold_1 AUGUSTUS stop_codon 2846005 2846007 . + 0 transcript_id "g559.t1"; gene_id "g559"; # protein sequence = [MLPPWPPSQFDGHLPHPSQPPPPPPPPPPPPPGPPSPPSSKSNKRKKGTDEEHAHDTSEPGGNSNTSDGDRKKRKRKK # KSTNTESAPRASTSSGQQEHQQTETPEASTKKSRKER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g559 ### # start gene g560 Scaffold_1 AUGUSTUS gene 2847009 2847470 0.57 + . g560 Scaffold_1 AUGUSTUS transcript 2847009 2847470 0.57 + . g560.t1 Scaffold_1 AUGUSTUS start_codon 2847009 2847011 . + 0 transcript_id "g560.t1"; gene_id "g560"; Scaffold_1 AUGUSTUS CDS 2847009 2847470 0.57 + 0 transcript_id "g560.t1"; gene_id "g560"; Scaffold_1 AUGUSTUS stop_codon 2847468 2847470 . + 0 transcript_id "g560.t1"; gene_id "g560"; # protein sequence = [MPLRNPKVTMLYYETDVYRDECKKYEGRTKNQRRRAPRIPHPEKKETNFIGLPKPSVPLDWFDPDEFNKLPVHIRVRY # RDSPVVLPLAEQMAGPEDDWKTMGHKGFMKKYGKEVRGQYQIPTKEEMESADVDTDDEMDEDEDDESDGSEMDES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g560 ### # start gene g561 Scaffold_1 AUGUSTUS gene 2849505 2850203 0.94 - . g561 Scaffold_1 AUGUSTUS transcript 2849505 2850203 0.94 - . g561.t1 Scaffold_1 AUGUSTUS stop_codon 2849505 2849507 . - 0 transcript_id "g561.t1"; gene_id "g561"; Scaffold_1 AUGUSTUS CDS 2849505 2850203 0.94 - 0 transcript_id "g561.t1"; gene_id "g561"; Scaffold_1 AUGUSTUS start_codon 2850201 2850203 . - 0 transcript_id "g561.t1"; gene_id "g561"; # protein sequence = [MHNPEQLKFWGPLACLSEFPGERLNGEFARISTNNHFNEMELTMVRQFGRKANLNVILNETDYEDDATRDLLEILAPV # DVYEFARPAIMSSYEVAQFYKKHDDFKREEYNTLLHYLNSTGKEYYTAYPESMLYQSPTLLSILQPVVQRIRDFNFQGKTYSNVASHEAGSHIQYYIP # GGNGENMTGCIMEIWQLPLEQKLSTFLLVKEHLPLSPSQKVKSPYAWAPCSILQVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g561 ### # start gene g562 Scaffold_1 AUGUSTUS gene 2850251 2850634 0.95 - . g562 Scaffold_1 AUGUSTUS transcript 2850251 2850634 0.95 - . g562.t1 Scaffold_1 AUGUSTUS stop_codon 2850251 2850253 . - 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_1 AUGUSTUS CDS 2850251 2850634 0.95 - 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_1 AUGUSTUS start_codon 2850632 2850634 . - 0 transcript_id "g562.t1"; gene_id "g562"; # protein sequence = [MHEEDDSDDPDFKDLDVETLFKLTPQQIAHIRHCISEILLPTWVERPPRNLGEKSHGKLKAHQLLILFTVIFPLIIPE # LWAFGNETERKLLENFCDLVAATNIIASYSVTPQKQMIMGNTSRVTGIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g562 ### # start gene g563 Scaffold_1 AUGUSTUS gene 2850670 2851361 0.22 - . g563 Scaffold_1 AUGUSTUS transcript 2850670 2851361 0.22 - . g563.t1 Scaffold_1 AUGUSTUS stop_codon 2850670 2850672 . - 0 transcript_id "g563.t1"; gene_id "g563"; Scaffold_1 AUGUSTUS CDS 2850670 2851136 0.39 - 2 transcript_id "g563.t1"; gene_id "g563"; Scaffold_1 AUGUSTUS CDS 2851214 2851361 0.22 - 0 transcript_id "g563.t1"; gene_id "g563"; Scaffold_1 AUGUSTUS start_codon 2851359 2851361 . - 0 transcript_id "g563.t1"; gene_id "g563"; # protein sequence = [MEFDLPGKSMSTSSYPEGARVSARVYPNIADLLGSKKFTGFGSPSATYFLKAQAQAWKNAVTISEKENLFKQNSIRWI # PQHDIPYFDPVQHVVLGMMHNTLEGHLEFHLRELWGLGRTEKKEKQLAQEETERDRDEEFSVADTEETLSELEDLEEESREWQQSVTGSANDLNDLTM # DDVDDDNSTSTATPGPRTRSQSLGSYLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g563 ### # start gene g564 Scaffold_1 AUGUSTUS gene 2851567 2852419 0.77 - . g564 Scaffold_1 AUGUSTUS transcript 2851567 2852419 0.77 - . g564.t1 Scaffold_1 AUGUSTUS stop_codon 2851567 2851569 . - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_1 AUGUSTUS CDS 2851567 2852070 0.81 - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_1 AUGUSTUS CDS 2852160 2852182 0.81 - 2 transcript_id "g564.t1"; gene_id "g564"; Scaffold_1 AUGUSTUS CDS 2852275 2852419 0.94 - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_1 AUGUSTUS start_codon 2852417 2852419 . - 0 transcript_id "g564.t1"; gene_id "g564"; # protein sequence = [MEVERQQAEIDALASSSANLASHSFSLNSGTNPASASTPPPEIPDLVAAAWLIYMQAADYKIGKQTPKIGIPLDIRTV # YARLNLDPKIHRLFCCPTCFKMYPLDTSLKKCNYQKSSRAKPCNTDLWSFRHSKKGHKIQIPRCSYTTTSFDSWLQSFLRPSIEKCLYKTFIKTQNPA # PQERMYDIQDSPFWDSIRHNLNSPHDLIFSVYVDWFNPLGNKQAGEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g564 ### # start gene g565 Scaffold_1 AUGUSTUS gene 2853273 2853959 0.98 - . g565 Scaffold_1 AUGUSTUS transcript 2853273 2853959 0.98 - . g565.t1 Scaffold_1 AUGUSTUS stop_codon 2853273 2853275 . - 0 transcript_id "g565.t1"; gene_id "g565"; Scaffold_1 AUGUSTUS CDS 2853273 2853959 0.98 - 0 transcript_id "g565.t1"; gene_id "g565"; Scaffold_1 AUGUSTUS start_codon 2853957 2853959 . - 0 transcript_id "g565.t1"; gene_id "g565"; # protein sequence = [MHSHNDHHIDRGNVKHFPQSRRSISPLKGLTAFPASSSHTRDYQPHLRTLDHSHLRSEIGPDPAPDTENTETTNIPDE # SQNLKPDSGPRLFFVSAKTGEGVNNVFEYVAKRVVRRWAWEEKEEEREDSGDFDGYREAERRLQPSNRLKLREHQRQPSDGIGHGSGIMLNRSNGLRG # ASNGGGLGGRSWSEGMTITLSSLNGVVGSVSSMRGMRGTGETEGSGGGCCST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g565 ### # start gene g566 Scaffold_1 AUGUSTUS gene 2859094 2859477 0.86 + . g566 Scaffold_1 AUGUSTUS transcript 2859094 2859477 0.86 + . g566.t1 Scaffold_1 AUGUSTUS start_codon 2859094 2859096 . + 0 transcript_id "g566.t1"; gene_id "g566"; Scaffold_1 AUGUSTUS CDS 2859094 2859477 0.86 + 0 transcript_id "g566.t1"; gene_id "g566"; Scaffold_1 AUGUSTUS stop_codon 2859475 2859477 . + 0 transcript_id "g566.t1"; gene_id "g566"; # protein sequence = [MSSFTFVTRIALLIQAVLLIISIASPVHAVVVPVHHVLRRDNGPHHGDFKGGFNAGHGNGASSSATDDTSSATADSAT # TATEVAATSTDTAATTASTTSSSGTTYTGGYATYFYQEGVAGMIWVLPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g566 ### # start gene g567 Scaffold_1 AUGUSTUS gene 2867295 2868986 0.04 - . g567 Scaffold_1 AUGUSTUS transcript 2867295 2868986 0.04 - . g567.t1 Scaffold_1 AUGUSTUS stop_codon 2867295 2867297 . - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS CDS 2867295 2867434 0.23 - 2 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS CDS 2867534 2867944 0.21 - 2 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS CDS 2868040 2868304 0.28 - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS CDS 2868355 2868839 0.6 - 2 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS CDS 2868902 2868986 0.55 - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_1 AUGUSTUS start_codon 2868984 2868986 . - 0 transcript_id "g567.t1"; gene_id "g567"; # protein sequence = [MRPSVLIVLVLAAISTAAPLGEVNKRDGEPSATTTSPASKGPPDEGTTTTTTSSSSTSTSTAAGKDPFSNEGSSPVPT # TSPASKERTSETSKSEPASKSPEPSSSKEPESSSAKPTSHSGTESETSKLESETSSAKPTSHSGTETETSHTSTSSEEPKVTTSVKPTGSESESEHTP # TTSTKAGEEVRRIRTGTPTTNTESTITPAPDSGPTADPDSLPVTTDKHHDVLTAVKEILTEFINGQWQTIDTYAYPTATDGASNPEETGLPDGSSPEG # SPDNVNGTSDGTSDQPSTNDENSIGNDKDSNNTLNDATSPRDNDSGSANNSTSSDISSPSNNSTTSDDGSDTDSSSEGTVVDDSSSETGSSDDESSSG # NSSPDGASDSSSAASSSTTSKKPSTAATGKSDAPSPATQKANHLDTDRKRTRVGLLKSQHRCPILCLQPDLELINQCKPIYVSTEKSQV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g567 ### # start gene g568 Scaffold_1 AUGUSTUS gene 2875498 2876903 0.27 - . g568 Scaffold_1 AUGUSTUS transcript 2875498 2876903 0.27 - . g568.t1 Scaffold_1 AUGUSTUS stop_codon 2875498 2875500 . - 0 transcript_id "g568.t1"; gene_id "g568"; Scaffold_1 AUGUSTUS CDS 2875498 2876845 0.35 - 1 transcript_id "g568.t1"; gene_id "g568"; Scaffold_1 AUGUSTUS CDS 2876887 2876903 0.27 - 0 transcript_id "g568.t1"; gene_id "g568"; Scaffold_1 AUGUSTUS start_codon 2876901 2876903 . - 0 transcript_id "g568.t1"; gene_id "g568"; # protein sequence = [MSPRISTTGTPAASSAPTPRSEPIPAERVLTVSEVTTIFLKSLLQSAEDFLGKRVQGAVITVPSVFTDAQKHALEKAA # KDAGIIVYQLLEEPAAVAAVTTAEAWGSMLPADRTQLIVDVGSSSLSLSLLALREGLAHIIASTSSTSTGGDAIDSKLITFFANEFTKKTKTPLTVCS # ETPSTGDARAEAKLRLAIEHTKRTISASPNAATCSVESLKDGVDFTGNINRMRFDMLVRPIYDSVARAIVDLLAEAKVDPHQVDEIVYVGGTTCLPGL # DEHIGLAGGFSEGVNTPFSMGTVIGGGIGDPTTVLARGCAVQAALIASLSSEGEDEELRKAFEHGSDLVDVKTTSKTLGLVFPDDSGNETGGTWIPLV # LAETTLPARRTATFDIGLSEESKRFAFELWEVTEGIRVEKILPAKVSPSDAEDEDEEEEEEEIKHKTITKETLLVLRKQRLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g568 ### # start gene g569 Scaffold_1 AUGUSTUS gene 2880930 2881562 0.91 + . g569 Scaffold_1 AUGUSTUS transcript 2880930 2881562 0.91 + . g569.t1 Scaffold_1 AUGUSTUS start_codon 2880930 2880932 . + 0 transcript_id "g569.t1"; gene_id "g569"; Scaffold_1 AUGUSTUS CDS 2880930 2881562 0.91 + 0 transcript_id "g569.t1"; gene_id "g569"; Scaffold_1 AUGUSTUS stop_codon 2881560 2881562 . + 0 transcript_id "g569.t1"; gene_id "g569"; # protein sequence = [MHDQTSSPTLSVAFGPLSSNSASSSLSSSSSSDDLSPLFTLSYSPRITTMAKKRSHQDLPHLSIPFKPQTSRASFPHL # AHGERSAGQDAWTLESPLAVYNSQAGPETPSSASTSTSILISPSTPISPVTSIPTSISTPTSTSTPETPNSLSSPIVGVVDLTRNLKTVSSGPVSHGG # YSDIYQGELEMTKSDQNSSFNEEAEKIPVSLFLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g569 ### # start gene g570 Scaffold_1 AUGUSTUS gene 2883593 2884030 0.93 + . g570 Scaffold_1 AUGUSTUS transcript 2883593 2884030 0.93 + . g570.t1 Scaffold_1 AUGUSTUS start_codon 2883593 2883595 . + 0 transcript_id "g570.t1"; gene_id "g570"; Scaffold_1 AUGUSTUS CDS 2883593 2884030 0.93 + 0 transcript_id "g570.t1"; gene_id "g570"; Scaffold_1 AUGUSTUS stop_codon 2884028 2884030 . + 0 transcript_id "g570.t1"; gene_id "g570"; # protein sequence = [MLPPWPPSQFDGHLPHPSQPPPPPPPPPPPPPGPPSPPSSKSNKRKKGTDEEHAHDTSEPGGNSNTSDGDRKKRKRKK # KSTNTESAPRASTSSGQQEHQQTETPEASTKKKQKGKVVNEVYRVSRRDLKEDATGGAERLRVCDLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g570 ### # start gene g571 Scaffold_1 AUGUSTUS gene 2884966 2885331 0.46 + . g571 Scaffold_1 AUGUSTUS transcript 2884966 2885331 0.46 + . g571.t1 Scaffold_1 AUGUSTUS start_codon 2884966 2884968 . + 0 transcript_id "g571.t1"; gene_id "g571"; Scaffold_1 AUGUSTUS CDS 2884966 2885331 0.46 + 0 transcript_id "g571.t1"; gene_id "g571"; Scaffold_1 AUGUSTUS stop_codon 2885329 2885331 . + 0 transcript_id "g571.t1"; gene_id "g571"; # protein sequence = [MLYYETDVYRDECKKYEGRTKNQRRRAPRIPHPEKKETNFIGLPKPSVPLDWFDPDEFNKLPVHIRVRYRDSPVVLPL # AEQMAGPEDDWKTMGHKGFMKKYGKEVRASIKSQQRKKWSLRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g571 ### # start gene g572 Scaffold_1 AUGUSTUS gene 2887282 2889297 0.41 - . g572 Scaffold_1 AUGUSTUS transcript 2887282 2889297 0.41 - . g572.t1 Scaffold_1 AUGUSTUS stop_codon 2887282 2887284 . - 0 transcript_id "g572.t1"; gene_id "g572"; Scaffold_1 AUGUSTUS CDS 2887282 2889297 0.41 - 0 transcript_id "g572.t1"; gene_id "g572"; Scaffold_1 AUGUSTUS start_codon 2889295 2889297 . - 0 transcript_id "g572.t1"; gene_id "g572"; # protein sequence = [MEFDLPGKSMPTSSYPEGARVSARVYPNIADLLGSKKFTGFGSPSATYFCTWCTLSKEQVENLDYDSWQLRDGNTVKA # QAQAWKNAVTISEKENLFKQNSIRWIPQHDIPYFDPVQHVVLGMMHNTLEGHLEFHLRELWGLGRTEKKEKQLAQEETERDRDEEFSVADTEETLSEL # EDLEEESREWQQSVTGSANDLNDLTMDDVDDDNSTSTATPGPRTRSQSLGSLSSLTSQAIQWDLSSNMHEEDDSDDPDFKDLDVETLFKLTPQQIAHI # RHCISEILLPTWVERPPRNLGEKSHGKLKAHQLLILFTVIFPLIIPELWAFGNETERKLLENFCDLVAATNIIASYSVTPTEADDYGKYFKSYRNSMR # ELFPQYHSLPNHHYAMHNPEQLKFWGPLACLSEFPGERLNGEFARISTNNHFNEMELTMVRQFGRKANLNVILNETDYEDDATRDLLEILAPVDVYEF # AHDPAIMSSYEVAQFYKKHDDFKREEYNTLLHYLNSTGKEYYTAYPESMLYQSPTLLSILQPVVQRIRDFNFQGKTYSNVASHEAGSHIQYYIPGGNG # ENMTGCIMEIWQLPLEQKLSTFLLVKEHLPLSPSQKVKSPYAWAPCSILQSELVQRNLASYTYLIEPHHIICHLAVYKRPAGTYDIPQETMAIVWSLN # RGRRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g572 ### # start gene g573 Scaffold_1 AUGUSTUS gene 2893176 2894051 0.55 - . g573 Scaffold_1 AUGUSTUS transcript 2893176 2894051 0.55 - . g573.t1 Scaffold_1 AUGUSTUS stop_codon 2893176 2893178 . - 0 transcript_id "g573.t1"; gene_id "g573"; Scaffold_1 AUGUSTUS CDS 2893176 2894051 0.55 - 0 transcript_id "g573.t1"; gene_id "g573"; Scaffold_1 AUGUSTUS start_codon 2894049 2894051 . - 0 transcript_id "g573.t1"; gene_id "g573"; # protein sequence = [MPIVLADGTPGLLAEGKLGETVEKELPDLSEEVEKYKDDAGIMNAIYRDYSFLLSAYLLEPCHLRFLKGEGYGLGRQR # LPEVIAKPMVKVSEMYVLYTSLRFLSLPNKPFLFFQRSAGFKPFMEYAGSYALYNYRLADPSLGLTYSNLRLIRAFEQGLNPSSSEAGFVFVHIAMVS # HSGLLISGAVQALNGALTSDRPRFDAGMKDLLEALKEINRVMDTMWGKSKPNGYNTFRTFIFGITSQSMFPEGVVYEGVSEEPMAFRGESGANDSMVR # TMEEILHHTFSAPIFFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g573 ### # start gene g574 Scaffold_1 AUGUSTUS gene 2903159 2904068 0.2 - . g574 Scaffold_1 AUGUSTUS transcript 2903159 2904068 0.2 - . g574.t1 Scaffold_1 AUGUSTUS stop_codon 2903159 2903161 . - 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_1 AUGUSTUS CDS 2903159 2903411 0.71 - 1 transcript_id "g574.t1"; gene_id "g574"; Scaffold_1 AUGUSTUS CDS 2903557 2903579 0.34 - 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_1 AUGUSTUS CDS 2903663 2903815 0.33 - 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_1 AUGUSTUS CDS 2903904 2904068 0.86 - 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_1 AUGUSTUS start_codon 2904066 2904068 . - 0 transcript_id "g574.t1"; gene_id "g574"; # protein sequence = [MYNVNVKNTFGPGVQAIALSQYGSQVGFYGCGFYGYQDTLYANEGTQVYLKGYIEGGIDFIFGREGSAYFGGNTIGVL # AEGGSITASGRETDDSGSCEFTSFMTFVMSSTRIQSVIFESTTLDVAPNPALWSLWDGEADSIDNVLNADYNTTGPGASDLERASWATELTSASEAAE # YSISSAVGSDWEDWVDVSYFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g574 ### # start gene g575 Scaffold_1 AUGUSTUS gene 2906647 2907009 0.98 - . g575 Scaffold_1 AUGUSTUS transcript 2906647 2907009 0.98 - . g575.t1 Scaffold_1 AUGUSTUS stop_codon 2906647 2906649 . - 0 transcript_id "g575.t1"; gene_id "g575"; Scaffold_1 AUGUSTUS CDS 2906647 2907009 0.98 - 0 transcript_id "g575.t1"; gene_id "g575"; Scaffold_1 AUGUSTUS start_codon 2907007 2907009 . - 0 transcript_id "g575.t1"; gene_id "g575"; # protein sequence = [MGLWDLANVLKGQQEEKQRATRRRKEKENEGATHRHQPRWFVAETDGDTGERVWMPLRVVTEEDNKKRALEYWVERER # VWKEMQEVASEKEEEKKEGKAKWRGVEDIFVDEPDEMRKVDY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g575 ### # start gene g576 Scaffold_1 AUGUSTUS gene 2907943 2910147 0.95 - . g576 Scaffold_1 AUGUSTUS transcript 2907943 2910147 0.95 - . g576.t1 Scaffold_1 AUGUSTUS stop_codon 2907943 2907945 . - 0 transcript_id "g576.t1"; gene_id "g576"; Scaffold_1 AUGUSTUS CDS 2907943 2910147 0.95 - 0 transcript_id "g576.t1"; gene_id "g576"; Scaffold_1 AUGUSTUS start_codon 2910145 2910147 . - 0 transcript_id "g576.t1"; gene_id "g576"; # protein sequence = [MKANHPVEAARWIGAIGEWKVWSQQQQPQSSPTGQVASSSSSATRTSSSSHSAFTSLTTTATTTTTSLPPPTSTRTSI # SNSISNSLIGGLSTIRKKRKANFPDNKSSMDLVNPPSDVESLHKNLHGIHSEAESRMSGMSRTSRASKKANSRFGYSDDDDDEDEDPEGEEMEDDIEY # EEHDEEHDLDNNNGDDNVVSLPLPYSDTYSQQTRLIFDQIEIITTQQSSSSLQSLKNLVSTYISMTASRESHILTNLTSTKQRLSGTRSSLSRTRKSL # RITKQSLRATKESLRSSEAARKKLEATVKQAKRAQKAWEESMKVVLEEEVGLERQLKRTSRNFNSLKRGSRVLGSGPTSPTAASTTTSGALIGEDELR # TPTALGYYLDPSVPPEGLSTTSEGDREDREDTDDVEDEDDNLEDDDDEDEFFDAIEANNIPNLVVPAQLQQTAPTSLASSMSSVTTAAYATATPSPSI # STSTSLTVPDPSSNMFTSSITSTFASSPFASYSPYAYLRASLPIRTERPATSLWSALKNSIGKDLTKISFPVYFNEPTSMLQRMAEDMEFSECCEYKH # HLSSKNFQAHCSVILFSAPFSSVDIASSTPSPHLRIAYIAAFAMSNYSSTIGRIAKPFNPMLGETFEYVCLGDDFEGERKKGIHEQQEKQGKQGYRYV # SEQVSHHPPISACWAESLGMVESEDNSDLNGTVKTEGRGGDTTAKSTLKTNSWVRALKFDLRELHMCS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g576 ### # start gene g577 Scaffold_1 AUGUSTUS gene 2921755 2922327 0.87 + . g577 Scaffold_1 AUGUSTUS transcript 2921755 2922327 0.87 + . g577.t1 Scaffold_1 AUGUSTUS start_codon 2921755 2921757 . + 0 transcript_id "g577.t1"; gene_id "g577"; Scaffold_1 AUGUSTUS CDS 2921755 2922327 0.87 + 0 transcript_id "g577.t1"; gene_id "g577"; Scaffold_1 AUGUSTUS stop_codon 2922325 2922327 . + 0 transcript_id "g577.t1"; gene_id "g577"; # protein sequence = [MDEDKLTFIILAREGDAFIPDTVNPTDSQVSSLPMVGDVNIFFSGTPLSVSESTNSPPFDDGQEFTAEAEIMIAGNSQ # LPRSIYDYLKEKSPEPLYRRRGYAQEALRLMFQYVTGCPTSHFTQNPRVEMSQEEETHQVPVKMPHSIPPTSLITRISDKNTPSIKLFERLGFRITKH # VEVFEEVELRWIAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g577 ### # start gene g578 Scaffold_1 AUGUSTUS gene 2928124 2929067 0.51 - . g578 Scaffold_1 AUGUSTUS transcript 2928124 2929067 0.51 - . g578.t1 Scaffold_1 AUGUSTUS stop_codon 2928124 2928126 . - 0 transcript_id "g578.t1"; gene_id "g578"; Scaffold_1 AUGUSTUS CDS 2928124 2928657 0.95 - 0 transcript_id "g578.t1"; gene_id "g578"; Scaffold_1 AUGUSTUS CDS 2928798 2929067 0.52 - 0 transcript_id "g578.t1"; gene_id "g578"; Scaffold_1 AUGUSTUS start_codon 2929065 2929067 . - 0 transcript_id "g578.t1"; gene_id "g578"; # protein sequence = [MSSNVPIAGSNITAPTPQNTPLTHAPIAAGLSRPTVPDISEDKEEDNDDDDDDADALREQALAMVQGKLAGLIGKSSG # YLESLPVEVKLSYLALQKPLYERREAIINGSEKPTTEEITAGEQQSLKDDEDYTPVPKENIVPSAIPEFWLTALRNHIGLADLITERDEGALKHLLDI # RLSYLNENEKEYEGKPGFKITFIFSPNEFFENETLDKSYLYQDEVGYSGDFVYYKAIGTDIKWKEDKDLTKEYEIKKQRNKSSYIYTVYIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g578 ### # start gene g579 Scaffold_1 AUGUSTUS gene 2934535 2935731 1 - . g579 Scaffold_1 AUGUSTUS transcript 2934535 2935731 1 - . g579.t1 Scaffold_1 AUGUSTUS stop_codon 2934535 2934537 . - 0 transcript_id "g579.t1"; gene_id "g579"; Scaffold_1 AUGUSTUS CDS 2934535 2935731 1 - 0 transcript_id "g579.t1"; gene_id "g579"; Scaffold_1 AUGUSTUS start_codon 2935729 2935731 . - 0 transcript_id "g579.t1"; gene_id "g579"; # protein sequence = [MPSPPETNEHDLPASASQKQGALATEGLDRPANGTLQTEWTVGEDRGSEDRQGLGGSEETDARRVTPETKTAREGLVI # DGGHEQDTGLSVEDGRRDGESLTESAENGGTVVESPKKTKKKAGVQAAPKAKAKPARKSEVGGEKGPLDMKQKPRTRGSTASPAARPLASTRSAATID # HEDSGDEPLTTSLLLSPMSEGLEVTVDSLGNTTMEARVEKEFGIDLDITSVSKVVQVASKLKKMAIAVGGRQMEMRTAFRDETSTLRQDLGKLEERVA # RAESGRSGSDKAGEVVLRPDLVMLKSRVQNVEKVALKMPTGSEIEGRLAVALKGVKEDFAETCGGIQGEMRALRGIVKNDVKVVSKEARDDGRAVRAE # LKSEIQRVTAATKESLKEMQVIQRRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g579 ### # start gene g580 Scaffold_1 AUGUSTUS gene 2938626 2939740 0.51 - . g580 Scaffold_1 AUGUSTUS transcript 2938626 2939740 0.51 - . g580.t1 Scaffold_1 AUGUSTUS stop_codon 2938626 2938628 . - 0 transcript_id "g580.t1"; gene_id "g580"; Scaffold_1 AUGUSTUS CDS 2938626 2938826 0.6 - 0 transcript_id "g580.t1"; gene_id "g580"; Scaffold_1 AUGUSTUS CDS 2938898 2939207 0.63 - 1 transcript_id "g580.t1"; gene_id "g580"; Scaffold_1 AUGUSTUS CDS 2939481 2939740 0.89 - 0 transcript_id "g580.t1"; gene_id "g580"; Scaffold_1 AUGUSTUS start_codon 2939738 2939740 . - 0 transcript_id "g580.t1"; gene_id "g580"; # protein sequence = [MVHFSNRYVTQSFILVFGFTTNVVQAVLTPKRASCACGFVDDQGHVWREAITTDFTQAAGAIAALGSDWIMASDNEPQ # SGTAIANIHIPGFFSYESDTQEQDIEFLSSDIDYYQHVYYTDQPGTVDGVVDPNAHKDVEIDGADFTCGFVLFLLTGHYTHLITLPYSAFGEHRFDWL # QSSTNYYYNSALEANVPTEGSEIILNVWSNGDPAFSKGPPTSNAIATIQNIELYFNSTNFSEAEFNSACSLAGNIAQCSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g580 ### # start gene g581 Scaffold_1 AUGUSTUS gene 2941657 2942190 0.54 + . g581 Scaffold_1 AUGUSTUS transcript 2941657 2942190 0.54 + . g581.t1 Scaffold_1 AUGUSTUS start_codon 2941657 2941659 . + 0 transcript_id "g581.t1"; gene_id "g581"; Scaffold_1 AUGUSTUS CDS 2941657 2942190 0.54 + 0 transcript_id "g581.t1"; gene_id "g581"; Scaffold_1 AUGUSTUS stop_codon 2942188 2942190 . + 0 transcript_id "g581.t1"; gene_id "g581"; # protein sequence = [MRLVSSLVFILGFVLLGSAAPLDSRRPSSHIDITIAFEENPLEGIHTHLTQTYTEAVKEDVRSLVKSIAGRDLGAPKG # SALLFHWIGTPSPDTAKPVMFDISTKDHGRYRVAMSHRTPMHDVIVTDSSGHPVRTHGDRELPLEFIFTPAKYFDYSLISLPKPIIFGILGCLGNKQE # Y] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g581 ### # start gene g582 Scaffold_1 AUGUSTUS gene 2942772 2943206 0.89 + . g582 Scaffold_1 AUGUSTUS transcript 2942772 2943206 0.89 + . g582.t1 Scaffold_1 AUGUSTUS start_codon 2942772 2942774 . + 0 transcript_id "g582.t1"; gene_id "g582"; Scaffold_1 AUGUSTUS CDS 2942772 2943206 0.89 + 0 transcript_id "g582.t1"; gene_id "g582"; Scaffold_1 AUGUSTUS stop_codon 2943204 2943206 . + 0 transcript_id "g582.t1"; gene_id "g582"; # protein sequence = [MNFNFNFSNAIAVIKVRDQAFEIRAPSSHVDITVTFEGNPEKDNESFSKAYTNAVKKDVRALLKNVAARDLGAPAGEA # LLFHWVGVPTHDSTKPVMYDVMWNELGPYKVVMSHKTPMKDAIVKNARGGIVRNDGDRELLPYRSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g582 ### # start gene g583 Scaffold_1 AUGUSTUS gene 2963591 2965489 0.25 + . g583 Scaffold_1 AUGUSTUS transcript 2963591 2965489 0.25 + . g583.t1 Scaffold_1 AUGUSTUS start_codon 2963591 2963593 . + 0 transcript_id "g583.t1"; gene_id "g583"; Scaffold_1 AUGUSTUS CDS 2963591 2963798 0.35 + 0 transcript_id "g583.t1"; gene_id "g583"; Scaffold_1 AUGUSTUS CDS 2964717 2965489 0.38 + 2 transcript_id "g583.t1"; gene_id "g583"; Scaffold_1 AUGUSTUS stop_codon 2965487 2965489 . + 0 transcript_id "g583.t1"; gene_id "g583"; # protein sequence = [MKRTLTNLVGSKPSSRSTSPAPSDPSSSQSGITKEVALKLIPKKKVKGNEASVWGEMEVLKGLDHPNIVPKIFIKRLL # NPDPTRRPTAAEALKDTWLTTHDPSEEHDLSDGLRDHFDPRSKWRNAIAGARAIHRLASFGRTQSQLSTASDATASSGGWNSGSAGVGPPNTDDEDED # DGWHPASASEVKLGNGRDSTSGPGDNVNVTVTAPPEEESSSLNGSQSASSIPDDLSSTSHAGVENNFTTHASSGSMINDDDERDSLLTEEPSPLDTES # SHGDGHREYDPLEQDLQMPGSFDMEGPPLHNGIKEESLNSWGEMLKKLTLRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g583 ### # start gene g584 Scaffold_1 AUGUSTUS gene 2968736 2968966 0.57 + . g584 Scaffold_1 AUGUSTUS transcript 2968736 2968966 0.57 + . g584.t1 Scaffold_1 AUGUSTUS start_codon 2968736 2968738 . + 0 transcript_id "g584.t1"; gene_id "g584"; Scaffold_1 AUGUSTUS CDS 2968736 2968966 0.57 + 0 transcript_id "g584.t1"; gene_id "g584"; Scaffold_1 AUGUSTUS stop_codon 2968964 2968966 . + 0 transcript_id "g584.t1"; gene_id "g584"; # protein sequence = [MTDNNGTIPQGQQSPPQTHDREQQLQTPSGEWDTQHLGGIDDPPSLFQSCMSIVLACPDPLPPRRTSSESSPDLPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g584 ### # start gene g585 Scaffold_1 AUGUSTUS gene 2971364 2973853 0.59 + . g585 Scaffold_1 AUGUSTUS transcript 2971364 2973853 0.59 + . g585.t1 Scaffold_1 AUGUSTUS start_codon 2971364 2971366 . + 0 transcript_id "g585.t1"; gene_id "g585"; Scaffold_1 AUGUSTUS CDS 2971364 2973853 0.59 + 0 transcript_id "g585.t1"; gene_id "g585"; Scaffold_1 AUGUSTUS stop_codon 2973851 2973853 . + 0 transcript_id "g585.t1"; gene_id "g585"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNPAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERVQGGSTDPLTVRQQEKLPERRVSPAV # SEQSRTSSRRLPTPPVQSLNLPPPRRGSSLSSLLKSPAMNTPNWERTHAIHHSRTNFPVQPLSEMTLRLEDVIRIQECIPEDVAMVLREVLESMGIEV # LGDGLEFSDLRVQFLTVGTQLEIDLPEKAQQWLMTPANRSDFLWLYNVLLDPERMLELLEAEARYGRSFRNSRGILPLLPHTHGREKEFCGEAGLRIL # YRASNYRSGAVRFEPPPSRVNIPNYQAIQILRNANLAEAAAKIDEESNEDANAIAAKNRRRRRYTTAHLLAPVESMPDQDSPVRVRNGQTVYTYTPMR # HMHQLLVRSEESEAMLCSQETRHRTLLAESDTLMLSEELSGSNLERALEFRRRLVADNRGTSYMVQCELESVGEFPPEQFDQKGQLHGSDGRFLAQKH # SSPRNTEVPELLNPGNTATRSPQLRSGTSPTVHALAQNATPPPRVNLQTKPLTPVSTQRYQFGEVRMDGAQHSSRISGQDLTARLAPNPVHVPPRLSN # PSVIPYQGSVSMQSQAVGTESQRGPNQRRTLAVHEEAVPPQGAPFGTPFVTGAQMNRPGMAFESARSQESVAMIQQQARVIETLQEQLREVKKGFTAG # EVPTGGPLSKTGNTAGLSGRAPRVMREYTRGGPSPVVPQPRSWQATEPISFNRNTPTGARVETPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g585 ### # start gene g586 Scaffold_1 AUGUSTUS gene 2976952 2977380 0.76 + . g586 Scaffold_1 AUGUSTUS transcript 2976952 2977380 0.76 + . g586.t1 Scaffold_1 AUGUSTUS start_codon 2976952 2976954 . + 0 transcript_id "g586.t1"; gene_id "g586"; Scaffold_1 AUGUSTUS CDS 2976952 2977380 0.76 + 0 transcript_id "g586.t1"; gene_id "g586"; Scaffold_1 AUGUSTUS stop_codon 2977378 2977380 . + 0 transcript_id "g586.t1"; gene_id "g586"; # protein sequence = [MLRASDSSATEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYD # IKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTCDSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g586 ### # start gene g587 Scaffold_1 AUGUSTUS gene 2979337 2980083 0.99 + . g587 Scaffold_1 AUGUSTUS transcript 2979337 2980083 0.99 + . g587.t1 Scaffold_1 AUGUSTUS start_codon 2979337 2979339 . + 0 transcript_id "g587.t1"; gene_id "g587"; Scaffold_1 AUGUSTUS CDS 2979337 2980083 0.99 + 0 transcript_id "g587.t1"; gene_id "g587"; Scaffold_1 AUGUSTUS stop_codon 2980081 2980083 . + 0 transcript_id "g587.t1"; gene_id "g587"; # protein sequence = [MAEFVYNNTPNTTTGVSPFFANKGYHPKLSITLEQVQEAEVNEYASNLKELHAYLQERIEVANKVYAKYANQKRQEAP # DWKEGDQVWLNMENVRTRRPMKKLDHKWTGPYTVLSKVGSHAYRLDLPGDLHKIHNVFHVDRLKPTSMTNSNARPPRPPNLHKRETEHFVEDILDSKP # KKGRPEEVEYLVKWEGYNDEFNSWVGWEGMVGSIELLRSWHKHHPRKRQPSRLQWASLEREAREDEEEGSGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g587 ### # start gene g588 Scaffold_1 AUGUSTUS gene 2980320 2982927 0.58 - . g588 Scaffold_1 AUGUSTUS transcript 2980320 2982927 0.58 - . g588.t1 Scaffold_1 AUGUSTUS stop_codon 2980320 2980322 . - 0 transcript_id "g588.t1"; gene_id "g588"; Scaffold_1 AUGUSTUS CDS 2980320 2981451 0.72 - 1 transcript_id "g588.t1"; gene_id "g588"; Scaffold_1 AUGUSTUS CDS 2981615 2982927 0.58 - 0 transcript_id "g588.t1"; gene_id "g588"; Scaffold_1 AUGUSTUS start_codon 2982925 2982927 . - 0 transcript_id "g588.t1"; gene_id "g588"; # protein sequence = [MSAPLRRSSSRTRSPQLPILTTIGEVPSPDLESDGEAEQDQLAFTIEFPSRPQLQLFETVFNTGKPLSGYCQDDPLWP # LLAEVASPCSNCSKSPAKCKVLPNSPRCTNCSVKKTCSLGKILRYRYFARRCNQDLAYSRRFLELHGTPAHQSTWGIPMVTWRQYDAALHERTSSTST # LLELNMLDDQDAADVDQQELRDFLALQQEEAAVAAKRKRDLSPLPVAGPSSKKVRSNASKKRPRRRSPVQETAEESPRRVRLVVPPVRSLPVTTSTPL # PPRAFPSSMEVPDADLSVQGHSNLVRLAAVAGAQSGLVQQPAVSSSIKGTGQDLLSSNMPPVPRPTLVPRALATHPYRAENQRLAARVRLLESQLSDS # QRENSSLTSALRDTSHALESRQREVEQLRSSSREVREQQVEYRRVLDQFRALDEALPGPPDRVRILLLYQQGVVDESNALATRQRRLVEELQEEVHRA # RGRAAFVEQMIKEYPDEGYYEVVLPPLSQLEGDLHKAREDLRRVATFAHRLYRSEPATVLHHHYRYLGAIIEAVVAFLRRGLDSDDLDTVVHNFQLGL # DYMQAARGVHGDMYMRSLSSIQWFFNNAVDEDEGLYRMVLEHSRFDNDGPFLTAAQHAGFAPPPDSSLEPPLHRRMFALSTALPHSDGAGRWDDIVPA # LPSIDQLTADWEQLMLQYIHHITDTPLPVPDPPVPMSSMGPVPESSGEANVEQSLEAPIVQVSSPSAGSHPPVPLFLSEQESPTSPSPPPCSPVPPLL # FGSVASLSIDLTGDDDELYETEESYAGRIAVAREGTELAVGQGIVKEESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g588 ### # start gene g589 Scaffold_1 AUGUSTUS gene 2992858 2993286 1 + . g589 Scaffold_1 AUGUSTUS transcript 2992858 2993286 1 + . g589.t1 Scaffold_1 AUGUSTUS start_codon 2992858 2992860 . + 0 transcript_id "g589.t1"; gene_id "g589"; Scaffold_1 AUGUSTUS CDS 2992858 2993286 1 + 0 transcript_id "g589.t1"; gene_id "g589"; Scaffold_1 AUGUSTUS stop_codon 2993284 2993286 . + 0 transcript_id "g589.t1"; gene_id "g589"; # protein sequence = [MEKSIQTAVVSGLSGLNQNVGRLTESLETISKTQSITSQLLSRLEARLDGERSHSQARSSSHFRSMSTNAGHADDTQA # EGSNQSPASAKGKERMEVDDDDDYEDYEEAEYADGEDQVEEGNTLKKKRKATKTKRALELQVRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g589 ### # start gene g590 Scaffold_1 AUGUSTUS gene 2999983 3000561 1 + . g590 Scaffold_1 AUGUSTUS transcript 2999983 3000561 1 + . g590.t1 Scaffold_1 AUGUSTUS start_codon 2999983 2999985 . + 0 transcript_id "g590.t1"; gene_id "g590"; Scaffold_1 AUGUSTUS CDS 2999983 3000561 1 + 0 transcript_id "g590.t1"; gene_id "g590"; Scaffold_1 AUGUSTUS stop_codon 3000559 3000561 . + 0 transcript_id "g590.t1"; gene_id "g590"; # protein sequence = [MHETESTHDSDNNEEIPRQVLESHNLNARVKTTLIPVEQDNQQRANSINEPLNDVDSDINYFLDVNSSEDQFKKNEKT # SAKQENERLRRELKGESITTLGFFIDAINPIELKSQMSARIRRDIAEHTHLNVLNRLLIQTRSEYSQNKLSQSAVNETFDNLSSQLRDLADRRLENMP # VGFGVHIGLNQNIRDR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g590 ### # start gene g591 Scaffold_1 AUGUSTUS gene 3005848 3007932 0.4 + . g591 Scaffold_1 AUGUSTUS transcript 3005848 3007932 0.4 + . g591.t1 Scaffold_1 AUGUSTUS start_codon 3005848 3005850 . + 0 transcript_id "g591.t1"; gene_id "g591"; Scaffold_1 AUGUSTUS CDS 3005848 3007932 0.4 + 0 transcript_id "g591.t1"; gene_id "g591"; Scaffold_1 AUGUSTUS stop_codon 3007930 3007932 . + 0 transcript_id "g591.t1"; gene_id "g591"; # protein sequence = [MGNNLDGFVLDLSLQADWDSLERNIRAFLRACMAINRFGVPENFRLWAFPLQYGYKRSYKGRDEARVAAHRSHQAFIP # LIASVSFFLHLLYHLENEWGNLVEKRKEDPVFTPNPFWSDRQNKMEKERQGPGPSKWEWKEKLRERTSISTEWLAYFHEIMDIPMVGLFLDVHHSGCM # SLLSVFLETKMPLVLYWGSINDWTIPSMLPSSIPAPNRALVNHLISQQVPYSPPVPAAPPASVAMSNMAKRRLRLPRLDGGTQPREREGVFEFLKRRE # IDRLRKIASESIKDRQSRLQREENASRNMPPGRKGARVYYWDLVEGVRVRTAVGRNNYEDIWERYGQRQRHYDSVADEWDICTELDPNDEPSYPDDDD # DDDDYFILAHSTMGEDTAHNLGTASSLAYLARLLPSSGSDERVVFDEPVDDIVVHRFGFAPDGRSTDRQYSCPEKIWNSTLLLIGCGRPPIPPIRDER # TASQLCTFLHDLMKAGRLQQAPRALDLISIRPALPFEVDVLPAGTTSYFLILPPAASESEAFFLAFTHAATVMEIARRKWGPGTADIIHYLIQHGFSF # NTLSPYHPLRGYDPQPQRQFPTLGVRHPGFRPGQDEYRSYEYRRDSFLRSVRGRAAILAGGIIARLARGVVDENDVFEGPTNQAIHGVCVSDPRLQVA # FWDDQLTSDEEDLICGCYEVWTGEVHFK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g591 ### # start gene g592 Scaffold_1 AUGUSTUS gene 3011320 3011733 0.56 + . g592 Scaffold_1 AUGUSTUS transcript 3011320 3011733 0.56 + . g592.t1 Scaffold_1 AUGUSTUS start_codon 3011320 3011322 . + 0 transcript_id "g592.t1"; gene_id "g592"; Scaffold_1 AUGUSTUS CDS 3011320 3011733 0.56 + 0 transcript_id "g592.t1"; gene_id "g592"; Scaffold_1 AUGUSTUS stop_codon 3011731 3011733 . + 0 transcript_id "g592.t1"; gene_id "g592"; # protein sequence = [MCTLVTPVLQLIPEDIQVRSIVGTVYNVSAVIGVMAIILLLLPAAWKEELDIPIAKTLLIKHGISKPRPFLDSILATL # DTGPLDSFSTSSPAASTANGPDPTSIVLTLVSANSVSSDPPSFTTQYSDGQGIWDRIFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g592 ### # start gene g593 Scaffold_1 AUGUSTUS gene 3039377 3040159 0.56 + . g593 Scaffold_1 AUGUSTUS transcript 3039377 3040159 0.56 + . g593.t1 Scaffold_1 AUGUSTUS start_codon 3039377 3039379 . + 0 transcript_id "g593.t1"; gene_id "g593"; Scaffold_1 AUGUSTUS CDS 3039377 3040159 0.56 + 0 transcript_id "g593.t1"; gene_id "g593"; Scaffold_1 AUGUSTUS stop_codon 3040157 3040159 . + 0 transcript_id "g593.t1"; gene_id "g593"; # protein sequence = [MGSVEEEDRVRVATNAVHPHSYTPRPILSPIEFGQESRIDPDGVSRAGQQMYAEQVFKNPGIAPSHSTTSSTSMLKLA # STSPSVLSASLFGSSSMNHIPVPSLVSLYSIYPVYPNHPIHANPLVTIGQLQSNLMTPTSDPGLAYFNQISHSNPGNLTSFPSPSPGPPTVASASGLT # SVSASASASPVLPISTETFQRKMHTYIRNIRDFCDGLEYQLQFNDLRMLQELEEKGNGFLEYVKTCLEREGRLKSDQSQDETGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g593 ### # start gene g594 Scaffold_1 AUGUSTUS gene 3041170 3042196 0.34 + . g594 Scaffold_1 AUGUSTUS transcript 3041170 3042196 0.34 + . g594.t1 Scaffold_1 AUGUSTUS start_codon 3041170 3041172 . + 0 transcript_id "g594.t1"; gene_id "g594"; Scaffold_1 AUGUSTUS CDS 3041170 3041524 0.34 + 0 transcript_id "g594.t1"; gene_id "g594"; Scaffold_1 AUGUSTUS CDS 3041613 3042196 0.45 + 2 transcript_id "g594.t1"; gene_id "g594"; Scaffold_1 AUGUSTUS stop_codon 3042194 3042196 . + 0 transcript_id "g594.t1"; gene_id "g594"; # protein sequence = [MFHIFITFVVDSYIERIEQRDRIQNLIFEPKPIHTAALHAYLNDLFTSTPEATDALETLRSELRSFGDEILSESISDE # SMVPLIRSLLSRDLLSAEKTAILKSFLDNKVILSEVASVLSQSKVASCQLLPFISSSRAYMDTEIIQALLFQYIGMKWSITMKNAFREFAESRAWKNE # IDPLSRKQLIRRQQFGVDVPGSEDAGDGNFSGDLWGQEPTPAKPSTGSNTAAPLVGSIQAQRKTLQLKQFFMTQLPDLMEGTAEYDQEPAVDSGGAQK # PNPGINAQQVLLRLVSTETYLKKILHGSCTIMRADLEW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g594 ### # start gene g595 Scaffold_1 AUGUSTUS gene 3043076 3043600 0.98 + . g595 Scaffold_1 AUGUSTUS transcript 3043076 3043600 0.98 + . g595.t1 Scaffold_1 AUGUSTUS start_codon 3043076 3043078 . + 0 transcript_id "g595.t1"; gene_id "g595"; Scaffold_1 AUGUSTUS CDS 3043076 3043600 0.98 + 0 transcript_id "g595.t1"; gene_id "g595"; Scaffold_1 AUGUSTUS stop_codon 3043598 3043600 . + 0 transcript_id "g595.t1"; gene_id "g595"; # protein sequence = [MVSKRFAVKDIPAGWCYFPVSEGGLEIVNPIMHLLTIRDSLASYPDKQFLDCMDEDKSKYGQAKADWVNGAGTRNEHN # PKSNFMPFEEYVLGREDRLAYWGDKWKYMQEMALPVSPTSPEGYSSYGKPVIEEWIMALYAHEIKTFFGGLKIVEPTLIPVGMLSVFRTAKVAWDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g595 ### # start gene g596 Scaffold_1 AUGUSTUS gene 3045840 3046454 0.87 + . g596 Scaffold_1 AUGUSTUS transcript 3045840 3046454 0.87 + . g596.t1 Scaffold_1 AUGUSTUS start_codon 3045840 3045842 . + 0 transcript_id "g596.t1"; gene_id "g596"; Scaffold_1 AUGUSTUS CDS 3045840 3046454 0.87 + 0 transcript_id "g596.t1"; gene_id "g596"; Scaffold_1 AUGUSTUS stop_codon 3046452 3046454 . + 0 transcript_id "g596.t1"; gene_id "g596"; # protein sequence = [MQGRRRSSESRRELALLDRQQQGRTSDEGNDGDDESETIFVAGEASDSDSDSGQAQKGQFEREERRITLLRLGEAGSS # SMNVTPAVTNYREDDEDVLDEGAVLVGRPRDEEEGEEDEGMDEHSGGGLSAKAGIILVRSSPQYLALSTYLQNVVMLILSWQHTSQGIHNIFVVIPQF # LVTGLSSIIFALVDPAKSVLRGSHPGGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g596 ### # start gene g597 Scaffold_1 AUGUSTUS gene 3051522 3052289 0.3 + . g597 Scaffold_1 AUGUSTUS transcript 3051522 3052289 0.3 + . g597.t1 Scaffold_1 AUGUSTUS start_codon 3051522 3051524 . + 0 transcript_id "g597.t1"; gene_id "g597"; Scaffold_1 AUGUSTUS CDS 3051522 3052289 0.3 + 0 transcript_id "g597.t1"; gene_id "g597"; Scaffold_1 AUGUSTUS stop_codon 3052287 3052289 . + 0 transcript_id "g597.t1"; gene_id "g597"; # protein sequence = [MSTPPSQSKNTLTVPPGRQRPHSQPAVSSSTASASQSVLLPITDLNHHMWAQPRTQADLHQLQLGHPNRPYYTALRKN # MSPPSMPLHTASPSPQSAERPLSPSPSSRLSQTSSPAFQPPYPTSFCDDSHEFSIAEFSQFSPLGATTSTPFRPFGVVPSSPSAHDFSPPSRRSSLAL # SGFRLPSIKGKFRRNSETAFSKSDEMKIRLALARKVGGETGVGGGDEGYVYRGGMTNVKMHMRRLSRGLKDFVMINQRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g597 ### # start gene g598 Scaffold_1 AUGUSTUS gene 3052525 3053105 1 - . g598 Scaffold_1 AUGUSTUS transcript 3052525 3053105 1 - . g598.t1 Scaffold_1 AUGUSTUS stop_codon 3052525 3052527 . - 0 transcript_id "g598.t1"; gene_id "g598"; Scaffold_1 AUGUSTUS CDS 3052525 3052900 1 - 1 transcript_id "g598.t1"; gene_id "g598"; Scaffold_1 AUGUSTUS CDS 3052963 3053105 1 - 0 transcript_id "g598.t1"; gene_id "g598"; Scaffold_1 AUGUSTUS start_codon 3053103 3053105 . - 0 transcript_id "g598.t1"; gene_id "g598"; # protein sequence = [MSLYFYEPSYQWDRFFDNAFGALASRGNQGQSQALTERSDLPRFIRPKMDLHEDKEKNLVTATFEFPGVKKEEIQLDM # HNGRLTVSAETKVSEEHEQDGYAVRERSVGKFSRTLQLPQGVKVSLGSHLVVHWKIFTTMFQEEEIKASMENGVLTVTFPKATAEEKPKKITIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g598 ### # start gene g599 Scaffold_1 AUGUSTUS gene 3054287 3055234 0.77 - . g599 Scaffold_1 AUGUSTUS transcript 3054287 3055234 0.77 - . g599.t1 Scaffold_1 AUGUSTUS stop_codon 3054287 3054289 . - 0 transcript_id "g599.t1"; gene_id "g599"; Scaffold_1 AUGUSTUS CDS 3054287 3055234 0.77 - 0 transcript_id "g599.t1"; gene_id "g599"; Scaffold_1 AUGUSTUS start_codon 3055232 3055234 . - 0 transcript_id "g599.t1"; gene_id "g599"; # protein sequence = [MERLCSLTIADRPEVSSSVYARIFNQAKNLIDLRFCDTPSRYALYPGFSETTSFVFPALRSLEISSREIVAHRLSFLQ # CLTAPCLDQLTIRHSGYHLGHCCTDIKAFLQRSNTALSSLTLHQFSDEWGSEVSADLIAILRVLPTITSFRIDSCLFNLDELLEKMVYSSYQGSALLL # PKLTHFEISYEKDIENWPWKLTEMIFSRADAAEKGEVAETPDWGSTEISRLQKVTLHGLNGPDKDIARISSLLGLGFIYKKKEQDSESKSLLGFADAP # GEKKEEEDEDKEEGDEEEDEDEDDDDDEENTFNDPYWSSDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g599 ### # start gene g600 Scaffold_1 AUGUSTUS gene 3057544 3058488 0.34 - . g600 Scaffold_1 AUGUSTUS transcript 3057544 3058488 0.34 - . g600.t1 Scaffold_1 AUGUSTUS stop_codon 3057544 3057546 . - 0 transcript_id "g600.t1"; gene_id "g600"; Scaffold_1 AUGUSTUS CDS 3057544 3057950 0.6 - 2 transcript_id "g600.t1"; gene_id "g600"; Scaffold_1 AUGUSTUS CDS 3058006 3058256 0.61 - 1 transcript_id "g600.t1"; gene_id "g600"; Scaffold_1 AUGUSTUS CDS 3058316 3058488 0.34 - 0 transcript_id "g600.t1"; gene_id "g600"; Scaffold_1 AUGUSTUS start_codon 3058486 3058488 . - 0 transcript_id "g600.t1"; gene_id "g600"; # protein sequence = [MIVFDISNIRCFNRCTYAREILEKCDSSVLRPRNAVYMAEIGAQESPVVGAHLKNAVKYQKDIDAFVHVIQGALQPVS # IPVSDTHQSTLGGNSWTPPINSKQNQLVICGQNPQQSREDNLGATAVTRAREVWLLTGLVPVVTTPHSEETTSSPIPRNELDSLLARARDFVKVDSTV # FDKSIRHTTVKDILTTSFPNRNIRSIPLAVQPHSKAESGFVTWSGSDTVLGDIINDPRFTIASEHRVTQLIVHPSFPGTVAGVLMRDLKTDRDVLVHA # RV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g600 ### # start gene g601 Scaffold_1 AUGUSTUS gene 3061144 3061986 0.75 + . g601 Scaffold_1 AUGUSTUS transcript 3061144 3061986 0.75 + . g601.t1 Scaffold_1 AUGUSTUS start_codon 3061144 3061146 . + 0 transcript_id "g601.t1"; gene_id "g601"; Scaffold_1 AUGUSTUS CDS 3061144 3061441 0.82 + 0 transcript_id "g601.t1"; gene_id "g601"; Scaffold_1 AUGUSTUS CDS 3061481 3061610 0.86 + 2 transcript_id "g601.t1"; gene_id "g601"; Scaffold_1 AUGUSTUS CDS 3061710 3061986 0.81 + 1 transcript_id "g601.t1"; gene_id "g601"; Scaffold_1 AUGUSTUS stop_codon 3061984 3061986 . + 0 transcript_id "g601.t1"; gene_id "g601"; # protein sequence = [MKPLYFVTVLTDNNLYLGLPRQSRLGLRQGKNAPPGEIANAKWTRHVLHDFGSLNPRHEGSIHHVICADIDGDGVDEL # LVACMGSNPPSWERTGVWCYKHIRLMANFALQLWISNLASFPGSSCPMIQPHGLLWVISDRATFCPSVILHASSLITAKRLNDEVVFRVPRPQNTKLA # DEVAFLDVASRKLSLVVVPPLTQYKIQGGAGLKVLAGRGMLEPSYVIIILIATTSIRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g601 ### # start gene g602 Scaffold_1 AUGUSTUS gene 3068747 3069364 0.74 + . g602 Scaffold_1 AUGUSTUS transcript 3068747 3069364 0.74 + . g602.t1 Scaffold_1 AUGUSTUS start_codon 3068747 3068749 . + 0 transcript_id "g602.t1"; gene_id "g602"; Scaffold_1 AUGUSTUS CDS 3068747 3069364 0.74 + 0 transcript_id "g602.t1"; gene_id "g602"; Scaffold_1 AUGUSTUS stop_codon 3069362 3069364 . + 0 transcript_id "g602.t1"; gene_id "g602"; # protein sequence = [MDRSQIARFWKGTRANEINSGSSVKQDSVGRKFPTFFKGPLKEVESQHLQDIKKQHRIAADIFFWLQSFQSNLSIQRV # VVQAIHGMFTENQEVELYIHQLKQYSISITQLMWNTVWKLNKKDIDDYKLWPQVTLLWVDYMAKEMSWRKLPITLPDNAWTHAISFNKSMVVRIMIDI # QQRCNLKVIQDNDWKDTALYQAAQKVTLM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g602 ### # start gene g603 Scaffold_1 AUGUSTUS gene 3071089 3072699 0.93 - . g603 Scaffold_1 AUGUSTUS transcript 3071089 3072699 0.93 - . g603.t1 Scaffold_1 AUGUSTUS stop_codon 3071089 3071091 . - 0 transcript_id "g603.t1"; gene_id "g603"; Scaffold_1 AUGUSTUS CDS 3071089 3072699 0.93 - 0 transcript_id "g603.t1"; gene_id "g603"; Scaffold_1 AUGUSTUS start_codon 3072697 3072699 . - 0 transcript_id "g603.t1"; gene_id "g603"; # protein sequence = [MQANYGGTEIPNALDAVFASLPSRLTRPVSIFLLTDGGVWGSLLIQCVTKIESTIASRSSDKSFLRVYTIGIGDGVST # ETCDRIARAGAGTSTYIVSDNEQYIGKCTRLVRAARTPPIVDIEVTWVTPKENASHDATGQVIDLFDAEVSYDDEECGGVGPLAPILQAPDPVPSFYR # STRTQVYAIVPDSIAVTKEIKISGRIPVTGASVALTIPVQRFSPFAPFPASPGGIGTGTAFLHTLAAKALIQDREDWEDSGNGPAGKPSVASLKEDIT # RLGIDYKLTSRYTSLIAVDRRNQNVLGMGYYSAPGAKKPKKNIVAEREGSFIPSFQARSLAHATFSSTPGGIGRAGADTATEALIILARLQNFDGSFD # ESSSKFDIEGLYSELGVDLGTGTETETEIKSIVDKFVSDTESEKGQVVYITLLAWAFMAVQSKSNAKAGEAFYDVKDKADVWLKENLKGSGAAGSDVD # VDELKRQFLDKVASLGHGGETYGHGEFDEYVDSDEDDFDFDLSLDLEEEGGFALGGEGVGLVEVVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g603 ### # start gene g604 Scaffold_1 AUGUSTUS gene 3073531 3074037 1 - . g604 Scaffold_1 AUGUSTUS transcript 3073531 3074037 1 - . g604.t1 Scaffold_1 AUGUSTUS stop_codon 3073531 3073533 . - 0 transcript_id "g604.t1"; gene_id "g604"; Scaffold_1 AUGUSTUS CDS 3073531 3074037 1 - 0 transcript_id "g604.t1"; gene_id "g604"; Scaffold_1 AUGUSTUS start_codon 3074035 3074037 . - 0 transcript_id "g604.t1"; gene_id "g604"; # protein sequence = [MTRCETRPPPPCAIPTPPPACPPVALPPVTSPPVARPPVTGPPAANPPGARPPVTNPPGSRPPTTSPPSSNLPLVLRE # CNIKVWIVDVHSWVTLSQQFQNPSSSVATHVTYTFSMLAGAAIYGFQIVRQDGTKVDGVVKQKDEAQKEMDIAVSEGLTAALGQEVTKDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g604 ### # start gene g605 Scaffold_1 AUGUSTUS gene 3080018 3080647 0.98 + . g605 Scaffold_1 AUGUSTUS transcript 3080018 3080647 0.98 + . g605.t1 Scaffold_1 AUGUSTUS start_codon 3080018 3080020 . + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_1 AUGUSTUS CDS 3080018 3080647 0.98 + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_1 AUGUSTUS stop_codon 3080645 3080647 . + 0 transcript_id "g605.t1"; gene_id "g605"; # protein sequence = [MSPLASSRLSSICLVLIHLLSFCVIASPLASSSLAAANPSATSTPAHPLTVDPAFLSTPGPVLPAGASSNDINLWYDG # EDARLYIGSTFFSVNDQMERQVKVSMVPGTNEGIMRKVGTVVFPSADVKSQVFAILQTCGFKSMNPKKPQTARGHYFMSVIKKLVDTSKRNSIPVTGE # NGNDVKMVLESLLRDNEFLGKTRKKQGNRYTPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g605 ### # start gene g606 Scaffold_1 AUGUSTUS gene 3099872 3100969 0.47 + . g606 Scaffold_1 AUGUSTUS transcript 3099872 3100969 0.47 + . g606.t1 Scaffold_1 AUGUSTUS start_codon 3099872 3099874 . + 0 transcript_id "g606.t1"; gene_id "g606"; Scaffold_1 AUGUSTUS CDS 3099872 3100330 0.75 + 0 transcript_id "g606.t1"; gene_id "g606"; Scaffold_1 AUGUSTUS CDS 3100385 3100430 0.47 + 0 transcript_id "g606.t1"; gene_id "g606"; Scaffold_1 AUGUSTUS CDS 3100554 3100969 0.71 + 2 transcript_id "g606.t1"; gene_id "g606"; Scaffold_1 AUGUSTUS stop_codon 3100967 3100969 . + 0 transcript_id "g606.t1"; gene_id "g606"; # protein sequence = [MSVSRTTTTTTRTSSTAGPSRSRPVAPLPADTSVHEEEGLEDEDEDEIIQRAQARVERVRARKVAAAAKKAAEEKAAR # AAAARERAAQEVQEQALWARQQEEEVVERRRLLAEVATARSQRGTLPSEMSVSPRRPVVEIRREKGKGRAKVPAQPVGGDPDDGDEEKEPLKREGGSS # EQIAIMESQMAQSLANLRALREANSKSHQYLRQLLRRQEDDHARLIAMETKMVMKGMGEGPATAGLSSRRTERRQLLKRRRIVEESAEEEEEEEEKEV # EKKEDKVEKDGEGEEEMAPTEAQSEKGKERAE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g606 ### # start gene g607 Scaffold_1 AUGUSTUS gene 3102081 3104436 0.22 + . g607 Scaffold_1 AUGUSTUS transcript 3102081 3104436 0.22 + . g607.t1 Scaffold_1 AUGUSTUS start_codon 3102081 3102083 . + 0 transcript_id "g607.t1"; gene_id "g607"; Scaffold_1 AUGUSTUS CDS 3102081 3102096 0.31 + 0 transcript_id "g607.t1"; gene_id "g607"; Scaffold_1 AUGUSTUS CDS 3103100 3104436 0.6 + 2 transcript_id "g607.t1"; gene_id "g607"; Scaffold_1 AUGUSTUS stop_codon 3104434 3104436 . + 0 transcript_id "g607.t1"; gene_id "g607"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g607 ### # start gene g608 Scaffold_1 AUGUSTUS gene 3105076 3106529 0.65 + . g608 Scaffold_1 AUGUSTUS transcript 3105076 3106529 0.65 + . g608.t1 Scaffold_1 AUGUSTUS start_codon 3105076 3105078 . + 0 transcript_id "g608.t1"; gene_id "g608"; Scaffold_1 AUGUSTUS CDS 3105076 3105820 0.65 + 0 transcript_id "g608.t1"; gene_id "g608"; Scaffold_1 AUGUSTUS CDS 3105871 3106529 0.84 + 2 transcript_id "g608.t1"; gene_id "g608"; Scaffold_1 AUGUSTUS stop_codon 3106527 3106529 . + 0 transcript_id "g608.t1"; gene_id "g608"; # protein sequence = [MKEQDRSMRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLK # KPSVTIEDVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVD # LSTEELAALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQRILQKDIVESFLRDLSIDDERRNIAIVA # NQSVAYEDHSDHPVVVANQSNGLRAVTPEINKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQ # LHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDSKGNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g608 ### # start gene g609 Scaffold_1 AUGUSTUS gene 3107140 3108175 0.32 + . g609 Scaffold_1 AUGUSTUS transcript 3107140 3108175 0.32 + . g609.t1 Scaffold_1 AUGUSTUS start_codon 3107140 3107142 . + 0 transcript_id "g609.t1"; gene_id "g609"; Scaffold_1 AUGUSTUS CDS 3107140 3107452 0.32 + 0 transcript_id "g609.t1"; gene_id "g609"; Scaffold_1 AUGUSTUS CDS 3107553 3108175 0.57 + 2 transcript_id "g609.t1"; gene_id "g609"; Scaffold_1 AUGUSTUS stop_codon 3108173 3108175 . + 0 transcript_id "g609.t1"; gene_id "g609"; # protein sequence = [MMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPILPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFC # VIKKNGKSLRLVHSLEPLNKVTIQHSDQLSKDMTMFQTLYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGY # ETIPENPGIRRFVWEHFQNMNRVMQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFA # KKAAPLTKLTSNVPFEWNEKCDKAMDELRMESETVQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g609 ### # start gene g610 Scaffold_1 AUGUSTUS gene 3109560 3110030 0.99 + . g610 Scaffold_1 AUGUSTUS transcript 3109560 3110030 0.99 + . g610.t1 Scaffold_1 AUGUSTUS start_codon 3109560 3109562 . + 0 transcript_id "g610.t1"; gene_id "g610"; Scaffold_1 AUGUSTUS CDS 3109560 3110030 0.99 + 0 transcript_id "g610.t1"; gene_id "g610"; Scaffold_1 AUGUSTUS stop_codon 3110028 3110030 . + 0 transcript_id "g610.t1"; gene_id "g610"; # protein sequence = [MLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDISKWFYFLKIYRVTPRRGLGCSPYFLVTGAEPL # LPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANNVAELRRFEQKYRHTIKDWDFKTRSISTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g610 ### # start gene g611 Scaffold_1 AUGUSTUS gene 3112942 3113292 0.81 + . g611 Scaffold_1 AUGUSTUS transcript 3112942 3113292 0.81 + . g611.t1 Scaffold_1 AUGUSTUS start_codon 3112942 3112944 . + 0 transcript_id "g611.t1"; gene_id "g611"; Scaffold_1 AUGUSTUS CDS 3112942 3113292 0.81 + 0 transcript_id "g611.t1"; gene_id "g611"; Scaffold_1 AUGUSTUS stop_codon 3113290 3113292 . + 0 transcript_id "g611.t1"; gene_id "g611"; # protein sequence = [MSSKTAHTEKPPAATVDVEDIWKQSAKTNSWDSDETEADASNLDANRYPLRDPRHSPYSQTNPSNRVLDPNICSCTVA # ATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g611 ### # start gene g612 Scaffold_1 AUGUSTUS gene 3115035 3115439 0.77 + . g612 Scaffold_1 AUGUSTUS transcript 3115035 3115439 0.77 + . g612.t1 Scaffold_1 AUGUSTUS start_codon 3115035 3115037 . + 0 transcript_id "g612.t1"; gene_id "g612"; Scaffold_1 AUGUSTUS CDS 3115035 3115439 0.77 + 0 transcript_id "g612.t1"; gene_id "g612"; Scaffold_1 AUGUSTUS stop_codon 3115437 3115439 . + 0 transcript_id "g612.t1"; gene_id "g612"; # protein sequence = [MDTQQQAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREM # LAIIEALKDWRNFWRDYPSHLTSSLITLTSNFGAQLKTSPAAKLAGLYTFHGLTST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g612 ### # start gene g613 Scaffold_1 AUGUSTUS gene 3124029 3124301 0.71 - . g613 Scaffold_1 AUGUSTUS transcript 3124029 3124301 0.71 - . g613.t1 Scaffold_1 AUGUSTUS stop_codon 3124029 3124031 . - 0 transcript_id "g613.t1"; gene_id "g613"; Scaffold_1 AUGUSTUS CDS 3124029 3124301 0.71 - 0 transcript_id "g613.t1"; gene_id "g613"; Scaffold_1 AUGUSTUS start_codon 3124299 3124301 . - 0 transcript_id "g613.t1"; gene_id "g613"; # protein sequence = [MRARNASLVSPPIEVDGEEEYNVAKILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELVPANELASFLCERE # RKESNGHSNQPI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g613 ### # start gene g614 Scaffold_1 AUGUSTUS gene 3124426 3125856 0.92 + . g614 Scaffold_1 AUGUSTUS transcript 3124426 3125856 0.92 + . g614.t1 Scaffold_1 AUGUSTUS start_codon 3124426 3124428 . + 0 transcript_id "g614.t1"; gene_id "g614"; Scaffold_1 AUGUSTUS CDS 3124426 3125856 0.92 + 0 transcript_id "g614.t1"; gene_id "g614"; Scaffold_1 AUGUSTUS stop_codon 3125854 3125856 . + 0 transcript_id "g614.t1"; gene_id "g614"; # protein sequence = [MGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLDRANAMSS # SSSGFQQGFLKRVPASAAPRVPRNQFVMFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPL # HKPIDVFNIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTET # PILELPELEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYR # DFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVK # NRYPLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g614 ### # start gene g615 Scaffold_1 AUGUSTUS gene 3126002 3128428 0.63 + . g615 Scaffold_1 AUGUSTUS transcript 3126002 3128428 0.63 + . g615.t1 Scaffold_1 AUGUSTUS start_codon 3126002 3126004 . + 0 transcript_id "g615.t1"; gene_id "g615"; Scaffold_1 AUGUSTUS CDS 3126002 3128428 0.63 + 0 transcript_id "g615.t1"; gene_id "g615"; Scaffold_1 AUGUSTUS stop_codon 3128426 3128428 . + 0 transcript_id "g615.t1"; gene_id "g615"; # protein sequence = [MFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEY # LGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPT # RIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYL # SRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDN # GLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLIT # QLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQE # VEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRK # AHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEE # ILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g615 ### # start gene g616 Scaffold_1 AUGUSTUS gene 3129251 3131547 0.51 - . g616 Scaffold_1 AUGUSTUS transcript 3129251 3131547 0.51 - . g616.t1 Scaffold_1 AUGUSTUS stop_codon 3129251 3129253 . - 0 transcript_id "g616.t1"; gene_id "g616"; Scaffold_1 AUGUSTUS CDS 3129251 3130288 0.99 - 0 transcript_id "g616.t1"; gene_id "g616"; Scaffold_1 AUGUSTUS CDS 3131536 3131547 0.69 - 0 transcript_id "g616.t1"; gene_id "g616"; Scaffold_1 AUGUSTUS start_codon 3131545 3131547 . - 0 transcript_id "g616.t1"; gene_id "g616"; # protein sequence = [MTIHIGWLECPLDSFLSLSHKNEASSLPPPHFDLDTGDHDDQDPPVDPDDPGADNDNDNLDDDSGSLPRGEPGDPSGP # GGPGGPCSPISPDIPNEQCAMLELLLEFKGSIKTLSTVLAALGHPSDSSESKSKVKEPEVFDGSDPQKLKMFFVNLALVFNDCPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNSGVYDTQGEAEDSLGNLKMKEIENIRFNTLAVSAKWDSAALKWAYGRGLAEHIKDEMAH # LPKLVMLADYCQEVLCIDNRYWKREAGKPFIAWTSKLVLLTSKTTLSHLALRRHSCRSLNLSLEVNLTMVSPRTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g616 ### # start gene g617 Scaffold_1 AUGUSTUS gene 3133303 3133878 1 + . g617 Scaffold_1 AUGUSTUS transcript 3133303 3133878 1 + . g617.t1 Scaffold_1 AUGUSTUS start_codon 3133303 3133305 . + 0 transcript_id "g617.t1"; gene_id "g617"; Scaffold_1 AUGUSTUS CDS 3133303 3133878 1 + 0 transcript_id "g617.t1"; gene_id "g617"; Scaffold_1 AUGUSTUS stop_codon 3133876 3133878 . + 0 transcript_id "g617.t1"; gene_id "g617"; # protein sequence = [MSFGSDPESFLEYALSLPDPVGPDPETSDSSDQSSPSDHNSEQESVQSGTNSDPDQSSYDSEFPGPFDYDYLHQSSDF # DSDHPGPYDLRYLHSYPSSSASDSVESFHSFTSDNSEAPELRPGDDGSGHPHLGPDGRLLDSERERRRVLGLCFYCGGEHMKIDCLKLQARTGQNYDA # DNSESDVPGSDDGSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g617 ### # start gene g618 Scaffold_1 AUGUSTUS gene 3136082 3138041 0.36 + . g618 Scaffold_1 AUGUSTUS transcript 3136082 3138041 0.36 + . g618.t1 Scaffold_1 AUGUSTUS start_codon 3136082 3136084 . + 0 transcript_id "g618.t1"; gene_id "g618"; Scaffold_1 AUGUSTUS CDS 3136082 3136289 0.49 + 0 transcript_id "g618.t1"; gene_id "g618"; Scaffold_1 AUGUSTUS CDS 3136348 3136752 0.72 + 2 transcript_id "g618.t1"; gene_id "g618"; Scaffold_1 AUGUSTUS CDS 3137494 3138041 0.97 + 2 transcript_id "g618.t1"; gene_id "g618"; Scaffold_1 AUGUSTUS stop_codon 3138039 3138041 . + 0 transcript_id "g618.t1"; gene_id "g618"; # protein sequence = [MRMVSSKDLDVFASLRGKESSAVALKATTSSPPLEIQSSTSVSKAFVAPPRLIRRNRELENLKADASSFLASLRSAHS # KDSDNELLSGFPSAGSAPVASSSTKVSIGKGEPKSKTTVKVVEDSKADRPLPAGMAYKRIRLPPRSRKILRLPQKEKRDKSLSLTRAQTSNEVESEDE # AEDEDIAPPPKRLKTTSSIFLEFLFFIFHLAISLRRAIDLNDQLKQLESLFDSTRDLFLRSVLDLQNAGEDPIVVLEALKAAEPNRRAISLNEWTLMA # TLFRWPSPFNLSGLDFDNRTPGEWIDLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGASSQVGGSIPMELDLPAIESLAEP # ALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g618 ### # start gene g619 Scaffold_1 AUGUSTUS gene 3139987 3140509 0.25 + . g619 Scaffold_1 AUGUSTUS transcript 3139987 3140509 0.25 + . g619.t1 Scaffold_1 AUGUSTUS start_codon 3139987 3139989 . + 0 transcript_id "g619.t1"; gene_id "g619"; Scaffold_1 AUGUSTUS CDS 3139987 3140005 0.25 + 0 transcript_id "g619.t1"; gene_id "g619"; Scaffold_1 AUGUSTUS CDS 3140082 3140509 0.99 + 2 transcript_id "g619.t1"; gene_id "g619"; Scaffold_1 AUGUSTUS stop_codon 3140507 3140509 . + 0 transcript_id "g619.t1"; gene_id "g619"; # protein sequence = [MFLLTVLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSI # LKSRQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g619 ### # start gene g620 Scaffold_1 AUGUSTUS gene 3140959 3143235 0.88 - . g620 Scaffold_1 AUGUSTUS transcript 3140959 3143235 0.88 - . g620.t1 Scaffold_1 AUGUSTUS stop_codon 3140959 3140961 . - 0 transcript_id "g620.t1"; gene_id "g620"; Scaffold_1 AUGUSTUS CDS 3140959 3143235 0.88 - 0 transcript_id "g620.t1"; gene_id "g620"; Scaffold_1 AUGUSTUS start_codon 3143233 3143235 . - 0 transcript_id "g620.t1"; gene_id "g620"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIEKYLSNPSDESLGEMSKDERIKFIRLIK # KFQVDDQGRLYHRNTDQPDQPQLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRSCKECQNRQMRLLKAPPTLMHTPSLFQ # KVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKI # ERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVR # RRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g620 ### # start gene g621 Scaffold_1 AUGUSTUS gene 3143349 3145825 0.26 - . g621 Scaffold_1 AUGUSTUS transcript 3143349 3145825 0.26 - . g621.t1 Scaffold_1 AUGUSTUS stop_codon 3143349 3143351 . - 0 transcript_id "g621.t1"; gene_id "g621"; Scaffold_1 AUGUSTUS CDS 3143349 3144708 0.98 - 1 transcript_id "g621.t1"; gene_id "g621"; Scaffold_1 AUGUSTUS CDS 3144801 3145041 0.33 - 2 transcript_id "g621.t1"; gene_id "g621"; Scaffold_1 AUGUSTUS CDS 3145156 3145825 0.46 - 0 transcript_id "g621.t1"; gene_id "g621"; Scaffold_1 AUGUSTUS start_codon 3145823 3145825 . - 0 transcript_id "g621.t1"; gene_id "g621"; # protein sequence = [MFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDE # EIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSE # ITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTDGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDK # QVFCVWRDGVLGEFDDQLNNEQFNLNPIKSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKV # RYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDE # FRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVER # NIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELD # QLSRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKDHQLDMNYQKEVTKLFQKILELDDLFGNISKT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g621 ### # start gene g622 Scaffold_1 AUGUSTUS gene 3146081 3146545 0.63 - . g622 Scaffold_1 AUGUSTUS transcript 3146081 3146545 0.63 - . g622.t1 Scaffold_1 AUGUSTUS stop_codon 3146081 3146083 . - 0 transcript_id "g622.t1"; gene_id "g622"; Scaffold_1 AUGUSTUS CDS 3146081 3146545 0.63 - 0 transcript_id "g622.t1"; gene_id "g622"; Scaffold_1 AUGUSTUS start_codon 3146543 3146545 . - 0 transcript_id "g622.t1"; gene_id "g622"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINTNIDHMIMFNLGRIVLFKLIHLRRYQETRRIKLIVMDILQPIKLGMKSRDQV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g622 ### # start gene g623 Scaffold_1 AUGUSTUS gene 3146575 3149564 0.3 - . g623 Scaffold_1 AUGUSTUS transcript 3146575 3149564 0.3 - . g623.t1 Scaffold_1 AUGUSTUS stop_codon 3146575 3146577 . - 0 transcript_id "g623.t1"; gene_id "g623"; Scaffold_1 AUGUSTUS CDS 3146575 3148544 0.5 - 2 transcript_id "g623.t1"; gene_id "g623"; Scaffold_1 AUGUSTUS CDS 3149549 3149564 0.34 - 0 transcript_id "g623.t1"; gene_id "g623"; Scaffold_1 AUGUSTUS start_codon 3149562 3149564 . - 0 transcript_id "g623.t1"; gene_id "g623"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQ # SHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLR # DNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g623 ### # start gene g624 Scaffold_1 AUGUSTUS gene 3152807 3153986 0.85 + . g624 Scaffold_1 AUGUSTUS transcript 3152807 3153986 0.85 + . g624.t1 Scaffold_1 AUGUSTUS start_codon 3152807 3152809 . + 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_1 AUGUSTUS CDS 3152807 3153028 0.88 + 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_1 AUGUSTUS CDS 3153084 3153986 0.95 + 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_1 AUGUSTUS stop_codon 3153984 3153986 . + 0 transcript_id "g624.t1"; gene_id "g624"; # protein sequence = [MEGDLRDAVRERKVAEEKLSSSTRKSSQLTTTLLYQQGRVDESNALATRQRRLVEELQEEVHRARDRAAFVEQMLEGD # LNKAREDLRRVATLAHRLHCSDPATVLHHHHRYIGAIIEAVVAFLRRGLESEDPDIATHNLHLALDYMQAARGVHGDLYIRSISSIQWFFNNAVDEDE # GLYRLVLEHSRFDNDSPFLTAAQHAGFAPPPDNSLEPPLHRRMLALSTALPHSDGVGRWDDLVPALPSVDQLTVDWEQLMLRYIHHITDVPLSGTDTQ # VPMSSVEPGTESLAEVTVEQLPEAPPLFLPEQESPTSPSPPPTSPTLPPPFASLANLTIDLTGDDDDLYETEESRMARVSMSREVVDSVAVQSVVKEE # PL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g624 ### # start gene g625 Scaffold_1 AUGUSTUS gene 3154264 3157128 0.65 - . g625 Scaffold_1 AUGUSTUS transcript 3154264 3157128 0.65 - . g625.t1 Scaffold_1 AUGUSTUS stop_codon 3154264 3154266 . - 0 transcript_id "g625.t1"; gene_id "g625"; Scaffold_1 AUGUSTUS CDS 3154264 3156671 0.97 - 2 transcript_id "g625.t1"; gene_id "g625"; Scaffold_1 AUGUSTUS CDS 3156993 3157128 0.65 - 0 transcript_id "g625.t1"; gene_id "g625"; Scaffold_1 AUGUSTUS start_codon 3157126 3157128 . - 0 transcript_id "g625.t1"; gene_id "g625"; # protein sequence = [MSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTATLHDEESHVEHVRKVLERLRANHLHAKPEKCAFHV # DTVEYLGVIISPLGVSMDPEKVKAVIDWPKPRTVKELQAFLGFANFYRRFIDNYSGITKVFTKLLRKDSVWNWTPQCSSAFELLKSAFSEAPVLGHYN # PDLPVVLECDASDLAIAGILSQLDPKRGRYILSPSMHVNDLAELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQAR # WAELLSGYDFVINYRPGRLGAKPDALTRRSDVYPKKGASRDQVLAGRERVLIPPERLNATILMNEDLLVNRVREAPKDTTIIEALKRIARNEEESFVW # EDGLIKRGGRIYVPDVGTLRREVLQSYHDHKLRGHPGEKRTKKLVNQLFFWKGLSKDVNYYVRSCHSCLRAKASRSKPYGNLRPLPIGQRPWSSISLD # HITQLPATAGPEKYDAILVVVCRLTKQAIYVPCHTTDKAEDFANLFITYVFSKHGMPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQT # ERVNQSVEAYLRIYCSYDQDDWDLLLPMAEFVYNNTPNTTTGVSPFFANKGYHPKLSITLEQVQGAEVNEYASNLKELHAYLQERIGVANKAYAKYAN # QKRQEAPDWKEGDQVWLNMENVRTRRPMKKLDHKWTGPYTILSKVGSRAYRLDLPGDLHKIHNVFHVDRLKPHFHDKFKRQTSPPPPIFIKGETEHFV # EDILDSKPKKGRPEEVEYLVKWEGYNDEFNSWVGWEGMVGSIELLRSWHKHHPRKRQPSRLQWASLEREAREDEEEDREGRRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g625 ### # start gene g626 Scaffold_1 AUGUSTUS gene 3159411 3160646 0.81 - . g626 Scaffold_1 AUGUSTUS transcript 3159411 3160646 0.81 - . g626.t1 Scaffold_1 AUGUSTUS stop_codon 3159411 3159413 . - 0 transcript_id "g626.t1"; gene_id "g626"; Scaffold_1 AUGUSTUS CDS 3159411 3160646 0.81 - 0 transcript_id "g626.t1"; gene_id "g626"; Scaffold_1 AUGUSTUS start_codon 3160644 3160646 . - 0 transcript_id "g626.t1"; gene_id "g626"; # protein sequence = [MREYTRGGPSPVVPQPRSWQATEPISFNRNTPTGARDGNPQVEQAGQIPDTPSVDRRRIHEWGARVQRAELGEYGRPE # GGAYALENEGGGKGGFNPPPRVPPPHFSSQSRDRERPLSQGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSNSEGSNEGEQNQSSRNGGRREEDRG # ELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIYAREKD # KCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEADEARRRLAWMKQMPEESFANFFIRFNEYAPLTGFNDEALVTYLKKG # VAPGCLYRLLPEGRNLDPTTSGPECSRSWTELYVRKRRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g626 ### # start gene g627 Scaffold_1 AUGUSTUS gene 3162376 3163005 0.98 - . g627 Scaffold_1 AUGUSTUS transcript 3162376 3163005 0.98 - . g627.t1 Scaffold_1 AUGUSTUS stop_codon 3162376 3162378 . - 0 transcript_id "g627.t1"; gene_id "g627"; Scaffold_1 AUGUSTUS CDS 3162376 3163005 0.98 - 0 transcript_id "g627.t1"; gene_id "g627"; Scaffold_1 AUGUSTUS start_codon 3163003 3163005 . - 0 transcript_id "g627.t1"; gene_id "g627"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g627 ### # start gene g628 Scaffold_1 AUGUSTUS gene 3165216 3166202 0.38 + . g628 Scaffold_1 AUGUSTUS transcript 3165216 3166202 0.38 + . g628.t1 Scaffold_1 AUGUSTUS start_codon 3165216 3165218 . + 0 transcript_id "g628.t1"; gene_id "g628"; Scaffold_1 AUGUSTUS CDS 3165216 3165266 1 + 0 transcript_id "g628.t1"; gene_id "g628"; Scaffold_1 AUGUSTUS CDS 3165316 3165601 0.38 + 0 transcript_id "g628.t1"; gene_id "g628"; Scaffold_1 AUGUSTUS CDS 3165958 3166202 0.93 + 2 transcript_id "g628.t1"; gene_id "g628"; Scaffold_1 AUGUSTUS stop_codon 3166200 3166202 . + 0 transcript_id "g628.t1"; gene_id "g628"; # protein sequence = [MDGTPGAVEARWDSVSEAESVRLTSESGKISIQNQLSVYGYRGEMWADITYYHSSATPTSNIMVTQQLQRQAQKQEVR # GQAPVIDILTTIVRNTHASSANVEMKPCPSSWDAAQEAEKGQNQRFGDTAMEHAYDAGVFNREYEQDPTAILARRCSALDKVQYAEWADQLKDYAANG # TVVESSDGLDLGSGYNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g628 ### # start gene g629 Scaffold_1 AUGUSTUS gene 3170512 3171247 0.34 - . g629 Scaffold_1 AUGUSTUS transcript 3170512 3171247 0.34 - . g629.t1 Scaffold_1 AUGUSTUS stop_codon 3170512 3170514 . - 0 transcript_id "g629.t1"; gene_id "g629"; Scaffold_1 AUGUSTUS CDS 3170512 3170905 0.37 - 1 transcript_id "g629.t1"; gene_id "g629"; Scaffold_1 AUGUSTUS CDS 3171024 3171247 0.34 - 0 transcript_id "g629.t1"; gene_id "g629"; Scaffold_1 AUGUSTUS start_codon 3171245 3171247 . - 0 transcript_id "g629.t1"; gene_id "g629"; # protein sequence = [MDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTYDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAIYC # SYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMRSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFLIGSE # VFVLAKHIRSTRPTEKFSEKYLGPFKVIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g629 ### # start gene g630 Scaffold_1 AUGUSTUS gene 3172552 3173241 0.98 - . g630 Scaffold_1 AUGUSTUS transcript 3172552 3173241 0.98 - . g630.t1 Scaffold_1 AUGUSTUS stop_codon 3172552 3172554 . - 0 transcript_id "g630.t1"; gene_id "g630"; Scaffold_1 AUGUSTUS CDS 3172552 3173241 0.98 - 0 transcript_id "g630.t1"; gene_id "g630"; Scaffold_1 AUGUSTUS start_codon 3173239 3173241 . - 0 transcript_id "g630.t1"; gene_id "g630"; # protein sequence = [MEPILLRAIHSEVAARAADRSSTAPTVPPLHHSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGAFAAPRRIYP # LSEKELVALKDFIDKQLATGAITPSSSPHSAPAFLMKTANFALRRISVDSIVSPKRIVTHSHSYQIFSTLPKRAKIYTKLDLAHIIISSESLKVTNGK # PPFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDISDLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g630 ### # start gene g631 Scaffold_1 AUGUSTUS gene 3178589 3179146 0.73 + . g631 Scaffold_1 AUGUSTUS transcript 3178589 3179146 0.73 + . g631.t1 Scaffold_1 AUGUSTUS start_codon 3178589 3178591 . + 0 transcript_id "g631.t1"; gene_id "g631"; Scaffold_1 AUGUSTUS CDS 3178589 3179146 0.73 + 0 transcript_id "g631.t1"; gene_id "g631"; Scaffold_1 AUGUSTUS stop_codon 3179144 3179146 . + 0 transcript_id "g631.t1"; gene_id "g631"; # protein sequence = [MKERFKREFTLLRGVYLFVGMIVTITQSELRHVWGEVTEIVIDDRDVVEEEAHDVRLKYGVAQVTVHVSQKIIAANPG # MNELVIIKPVMVPFKVPHPCETRREIVIERTQLPLVPRYAITEEDTMGQRFNKVVVDTSSGLSRYKSLYQVLTRVTGLGSLVLTSLVQGLGDNCDNVA # AQDILDVIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g631 ### # start gene g632 Scaffold_1 AUGUSTUS gene 3184274 3185960 0.66 + . g632 Scaffold_1 AUGUSTUS transcript 3184274 3185960 0.66 + . g632.t1 Scaffold_1 AUGUSTUS start_codon 3184274 3184276 . + 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_1 AUGUSTUS CDS 3184274 3184543 0.66 + 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_1 AUGUSTUS CDS 3184608 3185960 1 + 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_1 AUGUSTUS stop_codon 3185958 3185960 . + 0 transcript_id "g632.t1"; gene_id "g632"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPPAVRGNNPNVAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPGG # PRLPSPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLSYLSGSA # KEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARL # PEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQR # PAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g632 ### # start gene g633 Scaffold_1 AUGUSTUS gene 3188168 3189517 0.74 + . g633 Scaffold_1 AUGUSTUS transcript 3188168 3189517 0.74 + . g633.t1 Scaffold_1 AUGUSTUS start_codon 3188168 3188170 . + 0 transcript_id "g633.t1"; gene_id "g633"; Scaffold_1 AUGUSTUS CDS 3188168 3189517 0.74 + 0 transcript_id "g633.t1"; gene_id "g633"; Scaffold_1 AUGUSTUS stop_codon 3189515 3189517 . + 0 transcript_id "g633.t1"; gene_id "g633"; # protein sequence = [MDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFANFYRRFIYNYSDIIVPMTRLTRKGASWIWDSSS # CQEAFENLKIAFTSAPILAHWEPNRPLIVETDAPITPLRAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDI # VTNHKNLEYFSTTKVLTRQQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASI # IMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDHPLSGHFGQNRTLEAVRRQYTWPKVRDFVR # DYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPLSNGYTAILVVVDRSSKQAIFFQLTTPLLPNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g633 ### # start gene g634 Scaffold_1 AUGUSTUS gene 3189674 3190462 0.55 + . g634 Scaffold_1 AUGUSTUS transcript 3189674 3190462 0.55 + . g634.t1 Scaffold_1 AUGUSTUS start_codon 3189674 3189676 . + 0 transcript_id "g634.t1"; gene_id "g634"; Scaffold_1 AUGUSTUS CDS 3189674 3190005 0.55 + 0 transcript_id "g634.t1"; gene_id "g634"; Scaffold_1 AUGUSTUS CDS 3190081 3190462 0.84 + 1 transcript_id "g634.t1"; gene_id "g634"; Scaffold_1 AUGUSTUS stop_codon 3190460 3190462 . + 0 transcript_id "g634.t1"; gene_id "g634"; # protein sequence = [MGRPSVSIRLSNSTSGSIVPTNKMTGRLYSRSPRFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVV # NLDELHVFLREEILLAQSRYKEQADRKRISHPEKISWSFQGHQSTWYFVLRAQAPRLSSPNSPGFPRLTAGAGYAEPVPNRTQSPPPPIEVDGEEEYN # VAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g634 ### # start gene g635 Scaffold_1 AUGUSTUS gene 3191455 3191967 0.62 - . g635 Scaffold_1 AUGUSTUS transcript 3191455 3191967 0.62 - . g635.t1 Scaffold_1 AUGUSTUS stop_codon 3191455 3191457 . - 0 transcript_id "g635.t1"; gene_id "g635"; Scaffold_1 AUGUSTUS CDS 3191455 3191967 0.62 - 0 transcript_id "g635.t1"; gene_id "g635"; Scaffold_1 AUGUSTUS start_codon 3191965 3191967 . - 0 transcript_id "g635.t1"; gene_id "g635"; # protein sequence = [MTTSRTTTTTQPSASTSSRPADPPSPGAPIDEDEDEIIREALARVERVKARKAAEAAKRKAAEEAAAKKAAEEAEKKK # QAAERAAAARRQAAQDARDRAVRAREQEDEIVERRRKLAEAATARSQGGTSTGDVSASPRRPIVEVSKMKNKGKGKAKAPVRLFRLTLNFLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g635 ### # start gene g636 Scaffold_1 AUGUSTUS gene 3199949 3200452 0.99 + . g636 Scaffold_1 AUGUSTUS transcript 3199949 3200452 0.99 + . g636.t1 Scaffold_1 AUGUSTUS start_codon 3199949 3199951 . + 0 transcript_id "g636.t1"; gene_id "g636"; Scaffold_1 AUGUSTUS CDS 3199949 3200452 0.99 + 0 transcript_id "g636.t1"; gene_id "g636"; Scaffold_1 AUGUSTUS stop_codon 3200450 3200452 . + 0 transcript_id "g636.t1"; gene_id "g636"; # protein sequence = [MSSNRSQHQQQEDWQSDTSAFPVIPPDSTTSSSASTSLTSALPAPLNSSSSAPLDVSSIDGNVSDQAKRHVMDMLAYY # TGAKEESFGVAIARRLQMRSMNVWATSPGNAQGRIPQRATEAQTIFEIPITKGEYMLESRRLWSTHSNSDMCNPYGTLHGACACYIVDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g636 ### # start gene g637 Scaffold_1 AUGUSTUS gene 3204835 3205306 0.61 + . g637 Scaffold_1 AUGUSTUS transcript 3204835 3205306 0.61 + . g637.t1 Scaffold_1 AUGUSTUS start_codon 3204835 3204837 . + 0 transcript_id "g637.t1"; gene_id "g637"; Scaffold_1 AUGUSTUS CDS 3204835 3204851 0.61 + 0 transcript_id "g637.t1"; gene_id "g637"; Scaffold_1 AUGUSTUS CDS 3205021 3205306 0.66 + 1 transcript_id "g637.t1"; gene_id "g637"; Scaffold_1 AUGUSTUS stop_codon 3205304 3205306 . + 0 transcript_id "g637.t1"; gene_id "g637"; # protein sequence = [MSLRASHEGLMLDYEQALTRECPVPKSVSSVPNEKAYYNTSAHFLWIGDRTRQLDGGHVEYFRGIKNPIGIKVGPSMQ # SDELVRLLDSELMIINLYSDHF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g637 ### # start gene g638 Scaffold_1 AUGUSTUS gene 3209845 3210950 0.42 - . g638 Scaffold_1 AUGUSTUS transcript 3209845 3210950 0.42 - . g638.t1 Scaffold_1 AUGUSTUS stop_codon 3209845 3209847 . - 0 transcript_id "g638.t1"; gene_id "g638"; Scaffold_1 AUGUSTUS CDS 3209845 3210551 0.73 - 2 transcript_id "g638.t1"; gene_id "g638"; Scaffold_1 AUGUSTUS CDS 3210689 3210950 0.42 - 0 transcript_id "g638.t1"; gene_id "g638"; Scaffold_1 AUGUSTUS start_codon 3210948 3210950 . - 0 transcript_id "g638.t1"; gene_id "g638"; # protein sequence = [MSKEVKAWAATSPEKTEPISITRRAPDDEDVAIDIKFAGICHSDIHTVRSEWGSTAYPLVVGHEIAGVVNAVGKNVTK # FQVGDHVGVVPRGGSGFRAACSGEYSIGQGSPVDVCRYHFVFTATPLACRARKEGGHHWIWWSRSYGRQACEVSNFFTILVHETDVPPRISLRALGSE # VTVFSQTNSKKELGLQLGADNYVATSEPDVFSQLSRKFDLIINTVSANIPLELYLSCLRRDGSLVQVGAPEHPLQISPFSLDAQRVGIHGSMIGGIAE # TQQMLEFCGEKQIFPEIETIPASYINEAYERVMKSQVKFRFVIDVSTM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g638 ### # start gene g639 Scaffold_1 AUGUSTUS gene 3212909 3214017 0.85 - . g639 Scaffold_1 AUGUSTUS transcript 3212909 3214017 0.85 - . g639.t1 Scaffold_1 AUGUSTUS stop_codon 3212909 3212911 . - 0 transcript_id "g639.t1"; gene_id "g639"; Scaffold_1 AUGUSTUS CDS 3212909 3213365 0.95 - 1 transcript_id "g639.t1"; gene_id "g639"; Scaffold_1 AUGUSTUS CDS 3213431 3214017 0.85 - 0 transcript_id "g639.t1"; gene_id "g639"; Scaffold_1 AUGUSTUS start_codon 3214015 3214017 . - 0 transcript_id "g639.t1"; gene_id "g639"; # protein sequence = [MSKEIKAWGATSPQRTEPMTITRRAPDDEDVAIDIKFAGICHSDIHTARNEWGRTTYPQVVGHEIAGVVNAVGKNVTK # FKVGDYVGIGCMVNSCRQCANCVDGEEQYCTSGLVLTYNSTDPKDGSITQGGYSQYIVVDQAFVLSVPESIPLDKAAPLMCAGITLYSPLNHWNAGPG # KRVGIIGFGGLGHMGVKLAKALGSEVTVFSQTNSKKELGLRFGADDYVATSEPDAFSKLGQRFDIIINTVSAKIPLDLYLSCLRRDGTLIQVGAPEDQ # LQISPSSLYAHRVGVHGSMIGGIAETQKMLDLCGEKQIFPEIETIPASYINEAYERVMKSDVKFRFVIDVSTM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g639 ### # start gene g640 Scaffold_1 AUGUSTUS gene 3214551 3216108 0.66 + . g640 Scaffold_1 AUGUSTUS transcript 3214551 3216108 0.66 + . g640.t1 Scaffold_1 AUGUSTUS start_codon 3214551 3214553 . + 0 transcript_id "g640.t1"; gene_id "g640"; Scaffold_1 AUGUSTUS CDS 3214551 3215024 0.66 + 0 transcript_id "g640.t1"; gene_id "g640"; Scaffold_1 AUGUSTUS CDS 3215074 3216108 1 + 0 transcript_id "g640.t1"; gene_id "g640"; Scaffold_1 AUGUSTUS stop_codon 3216106 3216108 . + 0 transcript_id "g640.t1"; gene_id "g640"; # protein sequence = [MSTFLSIPNNLDTLALSSASSSSISSSTSTSSLFDNSCLFSSSSSQTDISPPTSPLNEDEEEDSPDKRKLLVEYDESW # ESSCKGRLKTPTLNASNASLPVPQHSQGLLKVESPAAAADEAGYEAEESDGEESVARSILLKNKKKKLVKSKTRSGQGTESLKQEESELSILLSPAMT # ENIGQNLGLNPLTKPVLRPQFLDLNSPSPIVALPSPRSSSDPIPHLFWDIYPSSSRSSVDAISSPIVNINDRIHRGTALRKTTQKPLGLGLRLPGKSG # PCSRNSAPSIEIIRPLHSSDQTAKEKGLVGLGLKLPLGSPPASPSDSSSSFKPVSAKRRSLSGLGNGHPSTRNRGPSARVNNGGATSVTTVPSSEATI # RLVTSTQHGSGSILLPKMSAQVLGQAPGVASGLAAELLDVDTIHQRRTSICLKPLLSSKDHHFTKRHMYPILESPESCTNFTTIPTTSASTIYPALNL # TSPPSSQLRKLRSFSRSENVGVNTCSNIVIFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g640 ### # start gene g641 Scaffold_1 AUGUSTUS gene 3220942 3221601 0.6 - . g641 Scaffold_1 AUGUSTUS transcript 3220942 3221601 0.6 - . g641.t1 Scaffold_1 AUGUSTUS stop_codon 3220942 3220944 . - 0 transcript_id "g641.t1"; gene_id "g641"; Scaffold_1 AUGUSTUS CDS 3220942 3221601 0.6 - 0 transcript_id "g641.t1"; gene_id "g641"; Scaffold_1 AUGUSTUS start_codon 3221599 3221601 . - 0 transcript_id "g641.t1"; gene_id "g641"; # protein sequence = [MPRQSRSFASSANSSDNESLKENHVNGFNRVKMEKVKQQQTKVKEENARRARARVEEQERGDGLDVDADADTDEEEDF # DNQGSGSPKGRKRARANTDGDSRPSQFQDGTSCAPRSVTLPRDPKDKCVVLVFHHRRNHSLEIIHISFIPGSIVRIQLRNFVTYDYVEFRPGPYLNMI # IGPNGTGKSSIACAIALGLNFSPKVRLFKLNPFTLVESVMFPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g641 ### # start gene g642 Scaffold_1 AUGUSTUS gene 3224755 3225729 0.74 + . g642 Scaffold_1 AUGUSTUS transcript 3224755 3225729 0.74 + . g642.t1 Scaffold_1 AUGUSTUS start_codon 3224755 3224757 . + 0 transcript_id "g642.t1"; gene_id "g642"; Scaffold_1 AUGUSTUS CDS 3224755 3225729 0.74 + 0 transcript_id "g642.t1"; gene_id "g642"; Scaffold_1 AUGUSTUS stop_codon 3225727 3225729 . + 0 transcript_id "g642.t1"; gene_id "g642"; # protein sequence = [MRRASPTPDLLEAQSHVDVDFKVDSQLRSRTVERRAKKKNKQRKKQRKQQQQAKAGGGQINTTSEGQGVPVTEGNKEA # APNGGKAEAAQVLPKKPQPASEANGNTHAGPSNSGVSDVKGKEKEKEPGSAAITASSNHEPKPGGLSRVDTGSSISSTSSHSSTSSQTSCSSHGSSSS # ESSIDPYEHDHMYGTHCDPVPHQPADGVGESKEEEDKEKEKEDKEKEKKKRETEVEKRCWWHIDCGWFRITGCRYIWNRQFSKIIKERIHISRKRRRI # IGEFGIGEFRIGEFKSGWHTVWGLSFSTHYSNVVHEPPDFAQSTKRDIEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g642 ### # start gene g643 Scaffold_1 AUGUSTUS gene 3226797 3228039 0.91 + . g643 Scaffold_1 AUGUSTUS transcript 3226797 3228039 0.91 + . g643.t1 Scaffold_1 AUGUSTUS start_codon 3226797 3226799 . + 0 transcript_id "g643.t1"; gene_id "g643"; Scaffold_1 AUGUSTUS CDS 3226797 3227573 0.93 + 0 transcript_id "g643.t1"; gene_id "g643"; Scaffold_1 AUGUSTUS CDS 3227746 3228039 0.98 + 0 transcript_id "g643.t1"; gene_id "g643"; Scaffold_1 AUGUSTUS stop_codon 3228037 3228039 . + 0 transcript_id "g643.t1"; gene_id "g643"; # protein sequence = [MNKNSPTSAFATPSTTATTSAFGQPSAFGANNNNSPFGKPPTSVFGTSTFGQPSSTAFGGTPSTTNTSSVFGAPSTTT # TSAFGQSSTFGSSPAASTTSAFGAPAAASTSAFGQTSTPTSSLIKPAISGGAFAAFANSGPSAFGSGAPSGSGSGGGFAAFANSQPSTFSGTSSTNTG # GSAFGQPSAFGASSTGNNAFGSNSAPPAAPTSAFGALAPAAPSTTFGAFSQPASTASTSAFGQPASSTSVFGQPAPSTSNPTSSAGGGFGSGGGGAFG # SSTPLSNTTNTSSNSTDSKPNFDAPHLRKLFRPGKTPYDSQLPPNYLESVLPKAVVEVFKRDRFDWGEGGGVPEWIPPVELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g643 ### # start gene g644 Scaffold_1 AUGUSTUS gene 3229654 3230799 1 + . g644 Scaffold_1 AUGUSTUS transcript 3229654 3230799 1 + . g644.t1 Scaffold_1 AUGUSTUS start_codon 3229654 3229656 . + 0 transcript_id "g644.t1"; gene_id "g644"; Scaffold_1 AUGUSTUS CDS 3229654 3230799 1 + 0 transcript_id "g644.t1"; gene_id "g644"; Scaffold_1 AUGUSTUS stop_codon 3230797 3230799 . + 0 transcript_id "g644.t1"; gene_id "g644"; # protein sequence = [MLIRNTVFPFLTLAISLSVQGAPTGSKPRGNSHIVIARNAAGFLERDAPFDDKTLFLRSGEHSQLEARQQQKGQKSGQ # QNRSSHNKNVVNSWGKNTDRNRRKKAKQRAKAKLRKAAANANSVHPAVTAKTVATPPHVGALKEPVQAPLTEAEKKLELEKATEKKEEEKKKDGGEAK # KEEPKHVIPEHKETPAEKKEELNHLQTTEGEAPVPPTGADVTTAATAAVGSLAQLAPMIAQGMAAGGSAGASSAIANDVMGGGASGSPNSGSTSNAGS # SSTGDGVPPSSTGSSSSSNSSGDTGSSGSDSSTSSNKGEGEKEGKGDEDSGKKEDDGTGDGKGDETGDGSDNGKGDESSNSEDDKKTDSKKKSPDPDS # GHGSTEEVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g644 ### # start gene g645 Scaffold_1 AUGUSTUS gene 3233378 3233680 0.94 - . g645 Scaffold_1 AUGUSTUS transcript 3233378 3233680 0.94 - . g645.t1 Scaffold_1 AUGUSTUS stop_codon 3233378 3233380 . - 0 transcript_id "g645.t1"; gene_id "g645"; Scaffold_1 AUGUSTUS CDS 3233378 3233680 0.94 - 0 transcript_id "g645.t1"; gene_id "g645"; Scaffold_1 AUGUSTUS start_codon 3233678 3233680 . - 0 transcript_id "g645.t1"; gene_id "g645"; # protein sequence = [MSTHEEEDVQTQVEVDRNPNSPSKYPTTIGYGEDVEKRSTRRELQDVKPVYSPMNTLDSREVVIVDWDGPDDPKNPKK # PVSVLLVLQYTHSFVLQLAQES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g645 ### # start gene g646 Scaffold_1 AUGUSTUS gene 3235474 3235791 0.66 - . g646 Scaffold_1 AUGUSTUS transcript 3235474 3235791 0.66 - . g646.t1 Scaffold_1 AUGUSTUS stop_codon 3235474 3235476 . - 0 transcript_id "g646.t1"; gene_id "g646"; Scaffold_1 AUGUSTUS CDS 3235474 3235791 0.66 - 0 transcript_id "g646.t1"; gene_id "g646"; Scaffold_1 AUGUSTUS start_codon 3235789 3235791 . - 0 transcript_id "g646.t1"; gene_id "g646"; # protein sequence = [MYYDERGLLLNVSRQYRKERKARRLAKLAQDGRTARTKTRSSSDTGKFSGLEEDAIIDDEDGDEESERDHQEEPTKAP # VRRKDHDIADMYKTMDGSALIAIGSYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g646 ### # start gene g647 Scaffold_1 AUGUSTUS gene 3253372 3258431 0.22 - . g647 Scaffold_1 AUGUSTUS transcript 3253372 3258431 0.22 - . g647.t1 Scaffold_1 AUGUSTUS stop_codon 3253372 3253374 . - 0 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3253372 3254114 0.88 - 2 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3254168 3254319 0.84 - 1 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3255618 3255981 1 - 2 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3256022 3256347 0.42 - 1 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3256397 3256766 0.96 - 2 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS CDS 3256832 3258431 0.69 - 0 transcript_id "g647.t1"; gene_id "g647"; Scaffold_1 AUGUSTUS start_codon 3258429 3258431 . - 0 transcript_id "g647.t1"; gene_id "g647"; # protein sequence = [MDNTACVEMLRGQLPDKAQRKPGGLLSLMNKASSAHKQGKGNSDHRNEDLLQEMQAKFGVHASFVATSGNANRMQFGV # NHYAGVCMYDVSDFVEKDTDLLDPAFVPLLRNSSESFVAKLFSGPSLAAEKHYKDESIVVQAQVSSRPLRTLTPFVSSNFTGEGERTSEEAQEHLELD # RGKSYPVTTQINFTLSELFANISKARLWALSCIRPNDSGSPNSFDKRRVKAQIRSLLLSDLASRRSVEYVADFDLAQFCDRYVPTMRGSESERITQCA # RANGWIEGVDYVVGHRSIWLSYSAWKMVEDTVRAVEKDAKRALGDAGMEMDDDEDISVAPDDGTEYTHEGGGYGYGGVGSQMDGGGLGASNDDLVLRR # TGTNGTQHRSPNQGPAYNALPAPNSPAQMSTPNAFRGQADDGGWGSEWDKKDESSVTGTGTVPAGSSVKEGDGLVVKDAPDSVEEVPSTRSRRFWLGT # VWACTWFIPSFLLTHVGRMKRPDVRLAWRERSPFVSSFCFSTASSFSTLSFLAGYFAPTMIMHVYDVSNFVQGQHSDIDGEDSNSDDVLEALAGLDLT # YYFPVPLVLGCGNLGPTSTMKLSFKNFTETEPTADHSSGEFAQSTTSQLHNSDWYTATFQPVINQYHIGTLVHSWDEIQSYASDEDIEKIWGVYNNNL # YDLTDYFYTQDQNDNNDAYLFLDSGIETVFKDRSGQDITDSLNTALGKLNETYRQQNLDCLNNVFYIGQTDFRTTARCQAPNITLIVVAAILMSTMVL # KSSTVLSALQLAPKRTPELQDKFVLCQVPCYTEGEDSLRRTIDSLAALNYDDKRKLIFIICDGNITGSGNDRTTPRIVQDILGVDPKLDPEPLMFKSV # GEGSRALNYGKVYSGLYEFEGHVVPLFLPVYSFWCMDEFGWGNTRLVIGEGKDKKVIVNDDDKFDESMIPLKKFSEYEAEAWETGSRHSDETGYSKPH # THPRPTASRTGSPYNYQQGSQAGDYYRDTNLTMNSRSNPNPFTGSQQSLSNLSHHGGQQYAAPQLPYMPFGGGPGSAAGSDYGGRMPMGPVMPMGYQN # TGSMYGMPMGMGMNMMSPAAMDPRTTMMAGMMTGGSFGGSQSGAFAPPTMPASQEQRPLSTFSMATTVNPFAGPSQNPNPSDDELFAALRSYLGTQDL # MTVTKKYVLLCPVDDDFYSCVVEPLEKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g647 ### # start gene g648 Scaffold_1 AUGUSTUS gene 3261586 3262773 0.3 + . g648 Scaffold_1 AUGUSTUS transcript 3261586 3262773 0.3 + . g648.t1 Scaffold_1 AUGUSTUS start_codon 3261586 3261588 . + 0 transcript_id "g648.t1"; gene_id "g648"; Scaffold_1 AUGUSTUS CDS 3261586 3261760 0.72 + 0 transcript_id "g648.t1"; gene_id "g648"; Scaffold_1 AUGUSTUS CDS 3262085 3262773 0.4 + 2 transcript_id "g648.t1"; gene_id "g648"; Scaffold_1 AUGUSTUS stop_codon 3262771 3262773 . + 0 transcript_id "g648.t1"; gene_id "g648"; # protein sequence = [MEDIAGWKASTVFITIDSLKNHEEKGAAGDIYGGRCPTWGEARDIEWRKAEEEPEVLIKWLEQYVVSQDLLVWTKSRV # MPAPTYDRNSKRWTVTVNKAGQTCTLHPKHVVVATGMLGEPYIPKIEDQEIFEGQIMHSEGFSGGADFTGKRVIVVGTGNSGADIALDLSTHKARSVT # MIQRSTTVVQPASTIAEQHLQVYPPDVPVEVSDFRAFATPTFRLFEILAETRGLMWDQEKDLIEGLRKAGMNVDMGPYGAGILPLVYLRFGGACSSVP # WPQHLTNVASCIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g648 ### # start gene g649 Scaffold_1 AUGUSTUS gene 3269080 3270000 0.97 - . g649 Scaffold_1 AUGUSTUS transcript 3269080 3270000 0.97 - . g649.t1 Scaffold_1 AUGUSTUS stop_codon 3269080 3269082 . - 0 transcript_id "g649.t1"; gene_id "g649"; Scaffold_1 AUGUSTUS CDS 3269080 3270000 0.97 - 0 transcript_id "g649.t1"; gene_id "g649"; Scaffold_1 AUGUSTUS start_codon 3269998 3270000 . - 0 transcript_id "g649.t1"; gene_id "g649"; # protein sequence = [MLAISEDSLISLEEVHIQDGPSGNPRSLDIQASELRSWTSVGTTSSPFIRVLPPTSVCQQITEYSISNVTYTEVLKVI # RLFPHLRQLSVQNLSPENDLPGPELPATRLSQLQALHLIQLNLSASSANAFIALLDVIVCPALTHLLVDACGNISGAIQRLKERSNFELQHLIAAEDA # DAFVKGLSNCLELEEVEIRGAYLYKSITEVLAHLSTITTPTKLNNPSQLPPLPNLRRLHFQLGVLPFVDVVVENLHACVISRLFCAQHTTGLRQLEIC # ITTPDAQARKILDSPRLKYLHSVGVKIEIIGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g649 ### # start gene g650 Scaffold_1 AUGUSTUS gene 3271381 3272751 0.54 - . g650 Scaffold_1 AUGUSTUS transcript 3271381 3272751 0.54 - . g650.t1 Scaffold_1 AUGUSTUS stop_codon 3271381 3271383 . - 0 transcript_id "g650.t1"; gene_id "g650"; Scaffold_1 AUGUSTUS CDS 3271381 3272476 0.73 - 1 transcript_id "g650.t1"; gene_id "g650"; Scaffold_1 AUGUSTUS CDS 3272615 3272751 0.55 - 0 transcript_id "g650.t1"; gene_id "g650"; Scaffold_1 AUGUSTUS start_codon 3272749 3272751 . - 0 transcript_id "g650.t1"; gene_id "g650"; # protein sequence = [MRRMPLDVLEVIFRFGAEYFTNPEDFFSSTTHCLDIKSPPWIYARVRSSALPLIVYIDMFSAPASPDLVGFALRLVAA # HSRRWQSLFLVGGQGIDTKILSGDSLMSLENIQIQESSMEAPRSLDIAASQLRAWSAVGNLLSTSVQITPPTSLCRQITEYSISTVMYTEVHKILPLL # PNVRKLSVQDILNSNNPPTSELRLPHLREFNIRQQNNPLATFLPTDGLVALLDSISCPALTHLSVSVYGIFGDAFKRFERRSNFKLQHLIAGEGAGIL # VKGLQNRLALETIEIRGFHFYTSVIEVITHLHVPPALTPVALSMSWSPATSNSHSNISPPVTPFPNLRRFQFQLSLLPFMDIMEKLHACVSSRRSGSA # APLEILVAARDGQARTMLGHPRLKDLRSMGAKVEITST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g650 ### # start gene g651 Scaffold_1 AUGUSTUS gene 3275079 3275390 0.55 + . g651 Scaffold_1 AUGUSTUS transcript 3275079 3275390 0.55 + . g651.t1 Scaffold_1 AUGUSTUS start_codon 3275079 3275081 . + 0 transcript_id "g651.t1"; gene_id "g651"; Scaffold_1 AUGUSTUS CDS 3275079 3275390 0.55 + 0 transcript_id "g651.t1"; gene_id "g651"; Scaffold_1 AUGUSTUS stop_codon 3275388 3275390 . + 0 transcript_id "g651.t1"; gene_id "g651"; # protein sequence = [MVLPEATTAGQFYLDYIIYNPIPTFTLPSPAATIIGSTYSTLSTCTAGTTPYPSSAAVPAIAGGVVGSIAGVVVGMIL # TFALLRKIRIRFWRKFTGIPAKYKH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g651 ### # start gene g652 Scaffold_1 AUGUSTUS gene 3279663 3280014 0.78 + . g652 Scaffold_1 AUGUSTUS transcript 3279663 3280014 0.78 + . g652.t1 Scaffold_1 AUGUSTUS start_codon 3279663 3279665 . + 0 transcript_id "g652.t1"; gene_id "g652"; Scaffold_1 AUGUSTUS CDS 3279663 3279723 0.86 + 0 transcript_id "g652.t1"; gene_id "g652"; Scaffold_1 AUGUSTUS CDS 3279806 3280014 0.79 + 2 transcript_id "g652.t1"; gene_id "g652"; Scaffold_1 AUGUSTUS stop_codon 3280012 3280014 . + 0 transcript_id "g652.t1"; gene_id "g652"; # protein sequence = [MPHKFEDSAASSKSIKKDMQAIDNAPTGRDLYRSAPVYQDAPDDPPEPMETLKNPGSAGTESQVGAAGATGTLEIVRD # APVCRDFSVCA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g652 ### # start gene g653 Scaffold_1 AUGUSTUS gene 3296446 3296781 0.83 + . g653 Scaffold_1 AUGUSTUS transcript 3296446 3296781 0.83 + . g653.t1 Scaffold_1 AUGUSTUS start_codon 3296446 3296448 . + 0 transcript_id "g653.t1"; gene_id "g653"; Scaffold_1 AUGUSTUS CDS 3296446 3296781 0.83 + 0 transcript_id "g653.t1"; gene_id "g653"; Scaffold_1 AUGUSTUS stop_codon 3296779 3296781 . + 0 transcript_id "g653.t1"; gene_id "g653"; # protein sequence = [MISNPSNSPCTLGAHSWIRRNVQIPVDESSTPYVWGVVDLVPETDFPDFRNWAGIRSDSGSCMIIPRERDMIRIYVQL # EGQNAIDATKEAADGSKVKMGPEWILDVSKSEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g653 ### # start gene g654 Scaffold_1 AUGUSTUS gene 3297465 3297884 0.89 + . g654 Scaffold_1 AUGUSTUS transcript 3297465 3297884 0.89 + . g654.t1 Scaffold_1 AUGUSTUS start_codon 3297465 3297467 . + 0 transcript_id "g654.t1"; gene_id "g654"; Scaffold_1 AUGUSTUS CDS 3297465 3297884 0.89 + 0 transcript_id "g654.t1"; gene_id "g654"; Scaffold_1 AUGUSTUS stop_codon 3297882 3297884 . + 0 transcript_id "g654.t1"; gene_id "g654"; # protein sequence = [MIQKSTEFSSGIGVHYLPSDIVDIKNQGLASGIVIGKRMPPGTVVRLLDFCPIHIHDLLPSDTRFKILVFAGNASSSA # QRMRLQQLAVKIGNLRSLLGLDILPGNSSQSGLDVLTILSTKLELALFKELPLKLRSHWSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g654 ### # start gene g655 Scaffold_1 AUGUSTUS gene 3316025 3316216 0.61 - . g655 Scaffold_1 AUGUSTUS transcript 3316025 3316216 0.61 - . g655.t1 Scaffold_1 AUGUSTUS stop_codon 3316025 3316027 . - 0 transcript_id "g655.t1"; gene_id "g655"; Scaffold_1 AUGUSTUS CDS 3316025 3316216 0.61 - 0 transcript_id "g655.t1"; gene_id "g655"; Scaffold_1 AUGUSTUS start_codon 3316214 3316216 . - 0 transcript_id "g655.t1"; gene_id "g655"; # protein sequence = [MFSIVSIEELTIPMDDWKITRNTDSTSSAHSDTGGYRAPLQDLDLDPVGDFSYNVDSHSDPGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g655 ### # start gene g656 Scaffold_1 AUGUSTUS gene 3328876 3329166 0.52 - . g656 Scaffold_1 AUGUSTUS transcript 3328876 3329166 0.52 - . g656.t1 Scaffold_1 AUGUSTUS stop_codon 3328876 3328878 . - 0 transcript_id "g656.t1"; gene_id "g656"; Scaffold_1 AUGUSTUS CDS 3328876 3329166 0.52 - 0 transcript_id "g656.t1"; gene_id "g656"; Scaffold_1 AUGUSTUS start_codon 3329164 3329166 . - 0 transcript_id "g656.t1"; gene_id "g656"; # protein sequence = [MSGQMMVKPTQTHADPVNSVEFVPDEHMIVSGSSNDSIKVRDANSGHVIGEPIHEHTGHVIIVPSSPDGRKFTSASND # HSVRIWDAQNASLIREQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g656 ### # start gene g657 Scaffold_1 AUGUSTUS gene 3334180 3334410 0.41 + . g657 Scaffold_1 AUGUSTUS transcript 3334180 3334410 0.41 + . g657.t1 Scaffold_1 AUGUSTUS start_codon 3334180 3334182 . + 0 transcript_id "g657.t1"; gene_id "g657"; Scaffold_1 AUGUSTUS CDS 3334180 3334410 0.41 + 0 transcript_id "g657.t1"; gene_id "g657"; Scaffold_1 AUGUSTUS stop_codon 3334408 3334410 . + 0 transcript_id "g657.t1"; gene_id "g657"; # protein sequence = [MGSQVFSDDILGMESDDPIAEMFTKPKKKKKGKVVVIESTSESEDDEDSDSSESEVGGREAKEEEDGEASSEDEDC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g657 ### # start gene g658 Scaffold_1 AUGUSTUS gene 3335056 3335643 1 + . g658 Scaffold_1 AUGUSTUS transcript 3335056 3335643 1 + . g658.t1 Scaffold_1 AUGUSTUS start_codon 3335056 3335058 . + 0 transcript_id "g658.t1"; gene_id "g658"; Scaffold_1 AUGUSTUS CDS 3335056 3335643 1 + 0 transcript_id "g658.t1"; gene_id "g658"; Scaffold_1 AUGUSTUS stop_codon 3335641 3335643 . + 0 transcript_id "g658.t1"; gene_id "g658"; # protein sequence = [MDGTPGAGKGRGECRDGSNAFGWQAKQREEDTEDQPKAKETHKQPKIPVNLPGPLTISGSKPAFTYESKAEDPNAATK # MFQRTLDVVVPDVTVRDLVSLSSDLRKQWIDHTKVQHIPTTTDEPTVQATIRTKESLNLEYSTPVRMIEVMLFGRQKETHSSTTGRKSSSLEPMFAKR # WASEKSREDGYNGNCEWEP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g658 ### # start gene g659 Scaffold_1 AUGUSTUS gene 3335779 3337505 0.31 + . g659 Scaffold_1 AUGUSTUS transcript 3335779 3337505 0.31 + . g659.t1 Scaffold_1 AUGUSTUS start_codon 3335779 3335781 . + 0 transcript_id "g659.t1"; gene_id "g659"; Scaffold_1 AUGUSTUS CDS 3335779 3336924 0.31 + 0 transcript_id "g659.t1"; gene_id "g659"; Scaffold_1 AUGUSTUS CDS 3337077 3337505 0.72 + 0 transcript_id "g659.t1"; gene_id "g659"; Scaffold_1 AUGUSTUS stop_codon 3337503 3337505 . + 0 transcript_id "g659.t1"; gene_id "g659"; # protein sequence = [METETNVLVTVHDPMGRQRSRTVKTILKDIETPPDNSITPEEVVRMWERVQLDMLTDGEIQHPSNPTSLAAFIFHSNY # SHNQIHHILAYKRVAQKVQPIPTVMPDYAKVIRRFPEDPLLTLPSLSRNPPQFLPGVRLTEERLKGLGILKNGFLWPEERLLMADVLKKNEMGIAWDE # TEKGRFREDYFPPLKIPMIAHTPWADRTLPIPPGIRNKVIQLVREKVASGLYEPSNSSYRSQWFVVVKSDGGLRIVHNLKKLNAITVRDSGQPPIIHL # FIEQCGGRGIYSGIDVIAGFDHGTLHEDSRDPTTFDTPIGTFRLARIPQGWTGSVPVFHGHVAFLLQDETEVSPNFIDDLPVLGPKTRYEKQGGDYEV # LVENSGIRRFQSCEDSVLASLQSITEVRGFLGTAGVLRVWIKDFARITRPLVDLTKKDVTFIWLPEHQQAMANTKDAVSKCEVLVTIDYLSLLPVIMA # VDSSYIACGIILSQDNKDGRRHPSRFWSIAWNERKLVTPRPKLSFMASFEPFTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g659 ### # start gene g660 Scaffold_1 AUGUSTUS gene 3337544 3337951 0.77 + . g660 Scaffold_1 AUGUSTUS transcript 3337544 3337951 0.77 + . g660.t1 Scaffold_1 AUGUSTUS start_codon 3337544 3337546 . + 0 transcript_id "g660.t1"; gene_id "g660"; Scaffold_1 AUGUSTUS CDS 3337544 3337951 0.77 + 0 transcript_id "g660.t1"; gene_id "g660"; Scaffold_1 AUGUSTUS stop_codon 3337949 3337951 . + 0 transcript_id "g660.t1"; gene_id "g660"; # protein sequence = [MDASCVKGMINNPDMHPNAAMNRWIAAIQLFDFDLKHVPGKNFLGPDGVSRRRRTVDEGDEREGKADEWVDEILSAGI # WIAGAWDKEDRLGGIVEYRDTGTSSAFCLMASVEALDNVKIPHSQAAERAPIRYKIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g660 ### # start gene g661 Scaffold_1 AUGUSTUS gene 3340253 3341970 0.62 + . g661 Scaffold_1 AUGUSTUS transcript 3340253 3341970 0.62 + . g661.t1 Scaffold_1 AUGUSTUS start_codon 3340253 3340255 . + 0 transcript_id "g661.t1"; gene_id "g661"; Scaffold_1 AUGUSTUS CDS 3340253 3340558 0.71 + 0 transcript_id "g661.t1"; gene_id "g661"; Scaffold_1 AUGUSTUS CDS 3340642 3341000 0.87 + 0 transcript_id "g661.t1"; gene_id "g661"; Scaffold_1 AUGUSTUS CDS 3341178 3341970 0.85 + 1 transcript_id "g661.t1"; gene_id "g661"; Scaffold_1 AUGUSTUS stop_codon 3341968 3341970 . + 0 transcript_id "g661.t1"; gene_id "g661"; # protein sequence = [MPPTPRPALVPRTFTAHPYRAENQRLAARVRELESQLADSQRENSSLTSALRDTSHALESRQREVEQLRSSNREVREQ # EVEYRGVLDQFRALDEALPGTPGQGDLQDATRERKVAVEKLSTANRKNSHLATTLLHQQGLVDESNLLATRQRRLVEQLQEEVHRVRDRAAFVDQMIK # EYPDEGYYEVVLPPLSQLEGDLNKAHEDLRRVPPLLIAFTVRIPRPIQWFLNNTVDEDEGFLSHGLGTLRFDNDGPFLTAAQHAGFTPPPSDSLEPPL # HRRMLALSTPLPHSDGAGRWDDIVPALPSIDQLTADWEQLMLDYIHHITDTPLPGPNPPAPVSAVDPVTEPSQEVVVEQSPEVPVAPVSSSSIGFQPQ # VPLFLPEQESPTSPSPPPPSPTLPPLFGSVVNLAIDLTGDDDELYETEESRVARVSMTGEVVDLAPGQGIVKEESCSVSPSSCSVLVEPSFFVFVFYL # KIVAFFLFVLTFFVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g661 ### # start gene g662 Scaffold_1 AUGUSTUS gene 3342360 3343082 0.61 - . g662 Scaffold_1 AUGUSTUS transcript 3342360 3343082 0.61 - . g662.t1 Scaffold_1 AUGUSTUS stop_codon 3342360 3342362 . - 0 transcript_id "g662.t1"; gene_id "g662"; Scaffold_1 AUGUSTUS CDS 3342360 3343082 0.61 - 0 transcript_id "g662.t1"; gene_id "g662"; Scaffold_1 AUGUSTUS start_codon 3343080 3343082 . - 0 transcript_id "g662.t1"; gene_id "g662"; # protein sequence = [MPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQTERVNQSVEAYLRIYCSYDQDDWDLLLPMAEFVYNN # TPNTTTGVSPFFANKGYHPKLSITLEQVQGAEVNEYASNLKELHAYLQERIGVANKVYAKYANQKRQEAPDWKEGDQVWLNMENVRTRRPMKKLDHKW # TGPYTILSKVGSHAYRLDLPGDLHKIHNVFHVDRLKPHFHDKLNARPPRPPNLHKRGDGASRNP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g662 ### # start gene g663 Scaffold_1 AUGUSTUS gene 3346700 3348493 0.38 - . g663 Scaffold_1 AUGUSTUS transcript 3346700 3348493 0.38 - . g663.t1 Scaffold_1 AUGUSTUS stop_codon 3346700 3346702 . - 0 transcript_id "g663.t1"; gene_id "g663"; Scaffold_1 AUGUSTUS CDS 3346700 3348172 0.95 - 0 transcript_id "g663.t1"; gene_id "g663"; Scaffold_1 AUGUSTUS CDS 3348335 3348493 0.39 - 0 transcript_id "g663.t1"; gene_id "g663"; Scaffold_1 AUGUSTUS start_codon 3348491 3348493 . - 0 transcript_id "g663.t1"; gene_id "g663"; # protein sequence = [MREYTRGGPSPVVPQPRSWQATEPISFNRNTPTGAKDGNPQVEQAGQIPDTPSSIERSRTTSSQGGQGQREQGGRSGG # GAPPPPPPPPPPSGGPGDSNSEGSDEGEQNQSSRNGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRIT # IESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEADE # ARRRLAWMKQMPEESFANFFIRFNEYAPLTGFNDEALVTYLKKGVAPWLPLQVVTGREEPRSYDEWTRVFTKLDGAVRAQAESLRNLHGEKVQGWLSR # FPGLELAPEAPYKSPLRREREPADVWTSNPKPAATGRFQSRPNWKEGRQRASAAWGEGESYDSENREEDEDCCHCRDGGEWTEAVLRAGVTDTGRKWT # PEERAEKWRRRRQELCMRCGRKEHWAKDCPNPESLERPAEDQGSSERASKADSTRGRGRPTKGEVVRTIQLVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g663 ### # start gene g664 Scaffold_1 AUGUSTUS gene 3350258 3350839 1 - . g664 Scaffold_1 AUGUSTUS transcript 3350258 3350839 1 - . g664.t1 Scaffold_1 AUGUSTUS stop_codon 3350258 3350260 . - 0 transcript_id "g664.t1"; gene_id "g664"; Scaffold_1 AUGUSTUS CDS 3350258 3350839 1 - 0 transcript_id "g664.t1"; gene_id "g664"; Scaffold_1 AUGUSTUS start_codon 3350837 3350839 . - 0 transcript_id "g664.t1"; gene_id "g664"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLVIPEVTNTSSTVP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g664 ### # start gene g665 Scaffold_1 AUGUSTUS gene 3363989 3364402 0.4 + . g665 Scaffold_1 AUGUSTUS transcript 3363989 3364402 0.4 + . g665.t1 Scaffold_1 AUGUSTUS start_codon 3363989 3363991 . + 0 transcript_id "g665.t1"; gene_id "g665"; Scaffold_1 AUGUSTUS CDS 3363989 3364402 0.4 + 0 transcript_id "g665.t1"; gene_id "g665"; Scaffold_1 AUGUSTUS stop_codon 3364400 3364402 . + 0 transcript_id "g665.t1"; gene_id "g665"; # protein sequence = [MTQADNPPTPYIVCAKKSGRGMSMIRTRSYINNQEDKSLRIVKACLRTKPREDHAANLKADLSLTGSSSSCSSVAIVE # PMTDGDAASSLSLISSFLSKSSASVLSSCFISSDLTGLGLVAEGLLMALVMSKSKSSGH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g665 ### # start gene g666 Scaffold_1 AUGUSTUS gene 3368348 3369124 0.4 + . g666 Scaffold_1 AUGUSTUS transcript 3368348 3369124 0.4 + . g666.t1 Scaffold_1 AUGUSTUS start_codon 3368348 3368350 . + 0 transcript_id "g666.t1"; gene_id "g666"; Scaffold_1 AUGUSTUS CDS 3368348 3369124 0.4 + 0 transcript_id "g666.t1"; gene_id "g666"; Scaffold_1 AUGUSTUS stop_codon 3369122 3369124 . + 0 transcript_id "g666.t1"; gene_id "g666"; # protein sequence = [MPVPDTFDAFVPSNFADLFATAEIPPYIGLTELRELERNVVNKFQPSYLHAQKLCSKMILDHSLRCYYLALAILQSFP # SKTPSIPQISRDELIERVYLACILHDLGLSSHEEAIAHPTRDMTFEIHGGILAYEHLRAEYAPDLHLNNSQIADVAQSIMLHTVSFQTGMSSAAGMLL # YVSAFIDVVGYDAAPPNTKERAITYDTVREIEEAFPLDGMSLRFGGQIQEMLDTKPNCLVSHSVSLFLQLCYVTNSCCSQIF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g666 ### # start gene g667 Scaffold_1 AUGUSTUS gene 3370980 3372225 0.12 - . g667 Scaffold_1 AUGUSTUS transcript 3370980 3372225 0.12 - . g667.t1 Scaffold_1 AUGUSTUS stop_codon 3370980 3370982 . - 0 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3370980 3371305 0.84 - 2 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3371360 3371391 0.84 - 1 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3371452 3371503 0.56 - 2 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3371582 3371716 0.31 - 2 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3371767 3372014 0.6 - 1 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS CDS 3372107 3372225 0.97 - 0 transcript_id "g667.t1"; gene_id "g667"; Scaffold_1 AUGUSTUS start_codon 3372223 3372225 . - 0 transcript_id "g667.t1"; gene_id "g667"; # protein sequence = [MTSIFTHEFNTPIYKGKTSFNTGLYINGKFVEGSDKNTIDTAALLGALFATDRFVATGKIITKVAEATSKDVDVAVAA # AHKAFETTWGLNMGGAGRSRLLAKLAQLMEEHQQELAALEALDNGKTFTWAMDVDTTFAIDTIRYYAGWADKIHGQVVEVGVKIDQRRRYYSMELPFA # YDVVETWSCSRYWKLHCHEEFTPLTAIRMTELIHEAGFPPGTFNLLTGYGNTVGAAISSHMKIDKVAFTGSTLVGRKIMEAAAKSNLKDITLELVAKA # RTLYLTMQMLIKPSIGQLMGSSKPLVFSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g667 ### # start gene g668 Scaffold_1 AUGUSTUS gene 3373528 3373743 0.86 - . g668 Scaffold_1 AUGUSTUS transcript 3373528 3373743 0.86 - . g668.t1 Scaffold_1 AUGUSTUS stop_codon 3373528 3373530 . - 0 transcript_id "g668.t1"; gene_id "g668"; Scaffold_1 AUGUSTUS CDS 3373528 3373743 0.86 - 0 transcript_id "g668.t1"; gene_id "g668"; Scaffold_1 AUGUSTUS start_codon 3373741 3373743 . - 0 transcript_id "g668.t1"; gene_id "g668"; # protein sequence = [MNLSFQRIMGYIQSGKDQGATVHLGGDRNGTEGYYINPTIFTDTTPDMKIVQEEIFGPVGVVIKFEDDEGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g668 ### # start gene g669 Scaffold_1 AUGUSTUS gene 3398468 3398737 0.76 - . g669 Scaffold_1 AUGUSTUS transcript 3398468 3398737 0.76 - . g669.t1 Scaffold_1 AUGUSTUS stop_codon 3398468 3398470 . - 0 transcript_id "g669.t1"; gene_id "g669"; Scaffold_1 AUGUSTUS CDS 3398468 3398737 0.76 - 0 transcript_id "g669.t1"; gene_id "g669"; Scaffold_1 AUGUSTUS start_codon 3398735 3398737 . - 0 transcript_id "g669.t1"; gene_id "g669"; # protein sequence = [MECLRLGVLTTVKEPASDTSEVFRLCNLHTLCGFNDEELPEEPELPEVAVGVLAEADPEASPDTEVPDASPPANAAIG # GPGNVYDAEGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g669 ### # start gene g670 Scaffold_1 AUGUSTUS gene 3404639 3405805 0.54 + . g670 Scaffold_1 AUGUSTUS transcript 3404639 3405805 0.54 + . g670.t1 Scaffold_1 AUGUSTUS start_codon 3404639 3404641 . + 0 transcript_id "g670.t1"; gene_id "g670"; Scaffold_1 AUGUSTUS CDS 3404639 3405805 0.54 + 0 transcript_id "g670.t1"; gene_id "g670"; Scaffold_1 AUGUSTUS stop_codon 3405803 3405805 . + 0 transcript_id "g670.t1"; gene_id "g670"; # protein sequence = [MPFGMSLASGPVGTPALYDPNAPVGSRWSNSGFSTSNIARLYHSSAILLPDASVLIAGSNPNVDVNLTTYFPTTYQAE # IFYPAYFSATTRPIPSGIPTTLSYGGDSFDITVPASSYSGSGNDAADNTTVVVVRPGWTTHGMNMGQRFLQLNNTYTVNSDGSLTLHTAQMPPNPNIF # QPGPAMVFVVVNGIPSNGTFVIVGSGNVETQATAGASVLPASVLLSGASGSADGSSTSSGDNPTNSSGSTVSHTAVIVGTVVAGIIILGVIGALIGVC # ASRRRRAAAQKNPNVSSYAMSNTPLGSKTLGAAGYGGGLRSSDSSAFSLQRDFNDSQQWSSSSANLTGDGRLSPYHDAPLYLDDSRGPHGMSMELDPY # AAQSRMSTSSPHGQGY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g670 ### # start gene g671 Scaffold_1 AUGUSTUS gene 3406739 3407698 0.3 + . g671 Scaffold_1 AUGUSTUS transcript 3406739 3407698 0.3 + . g671.t1 Scaffold_1 AUGUSTUS start_codon 3406739 3406741 . + 0 transcript_id "g671.t1"; gene_id "g671"; Scaffold_1 AUGUSTUS CDS 3406739 3407001 0.32 + 0 transcript_id "g671.t1"; gene_id "g671"; Scaffold_1 AUGUSTUS CDS 3407065 3407698 0.62 + 1 transcript_id "g671.t1"; gene_id "g671"; Scaffold_1 AUGUSTUS stop_codon 3407696 3407698 . + 0 transcript_id "g671.t1"; gene_id "g671"; # protein sequence = [MLSKDYPGGKMIDPIPGVQNQEFYVDKDGTSRVDLSFVEEPLGLSGSEGYGWPQLEFGERIGPDLRYEIKRKLGWGMS # SSTWLAYDTGVNDYVAIKALTGFSTELRRRGRIWESEALQRVAGSNNHCLHLLNEFTHPGKGSSGDHSCFVTPVYGGDVKMLRAQHKNFPLPLAKRML # LHTLRGIAHAHSKGLIHTDLKHDNIFFTSPLSRQDIDANLASDPPRRNPPEASLDGIVSSAVTQPLPVPSLDDAMKCEYLIADFGSGTIFCLFYLCFF # LIPGVPTKLSSLINLRSSKSHQLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g671 ### # start gene g672 Scaffold_1 AUGUSTUS gene 3409013 3409312 0.79 + . g672 Scaffold_1 AUGUSTUS transcript 3409013 3409312 0.79 + . g672.t1 Scaffold_1 AUGUSTUS start_codon 3409013 3409015 . + 0 transcript_id "g672.t1"; gene_id "g672"; Scaffold_1 AUGUSTUS CDS 3409013 3409312 0.79 + 0 transcript_id "g672.t1"; gene_id "g672"; Scaffold_1 AUGUSTUS stop_codon 3409310 3409312 . + 0 transcript_id "g672.t1"; gene_id "g672"; # protein sequence = [MSSKDSLFGAKLDLVPGVQNQHVSVDKDGKNVVDLSFVEEPLGLPGLEGFGWPQLEFGERIGPDLRYEIKRKLGWGMH # SSTWLAYDTRRVEILFFSKSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g672 ### # start gene g673 Scaffold_1 AUGUSTUS gene 3410768 3411910 0.94 + . g673 Scaffold_1 AUGUSTUS transcript 3410768 3411910 0.94 + . g673.t1 Scaffold_1 AUGUSTUS start_codon 3410768 3410770 . + 0 transcript_id "g673.t1"; gene_id "g673"; Scaffold_1 AUGUSTUS CDS 3410768 3411910 0.94 + 0 transcript_id "g673.t1"; gene_id "g673"; Scaffold_1 AUGUSTUS stop_codon 3411908 3411910 . + 0 transcript_id "g673.t1"; gene_id "g673"; # protein sequence = [MDALIAKADATQPLSKKRKRTHPSDSKPGPSQKSDKTSASITKNTSLPTSLRSRTDKSADAPQFKHIANPKLRRSLVK # TSTHIAQSQALLSDAIDLLPSEETGFVQAEDTMERTWRLSQVDIVKEAGGEAARGRLEMKLDGGPYRVRYTKNGRHMAIAGRTGHVASFDTLTGAVHS # ELQLGETCSDVVFLQDHSFYAVAQQKYVFIYDRDGVEIHKLKAHVSPTRLEFLPYHWLLASVGTAGYLKYQDTSTGQLVAEHRTALGACSVLAQNPHN # AVLYLGHQNGCVTLWTPNLPHPAVKVLAHLGPLSSVSIDPSESGRYMATTGKDGSVKVWDCRNWKGAVREWTLRSGGKGDAEVEWSQKGVLAVGSGGV # STCIRRLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g673 ### # start gene g674 Scaffold_1 AUGUSTUS gene 3416461 3417234 0.85 - . g674 Scaffold_1 AUGUSTUS transcript 3416461 3417234 0.85 - . g674.t1 Scaffold_1 AUGUSTUS stop_codon 3416461 3416463 . - 0 transcript_id "g674.t1"; gene_id "g674"; Scaffold_1 AUGUSTUS CDS 3416461 3417234 0.85 - 0 transcript_id "g674.t1"; gene_id "g674"; Scaffold_1 AUGUSTUS start_codon 3417232 3417234 . - 0 transcript_id "g674.t1"; gene_id "g674"; # protein sequence = [MRLFSFIRCAVALYGLTLEAFYPFDVLPVTVSDEIKETLKAQAKDVNYISAIISLSFLTIFLYLIAVFSVVHGAVRIA # MYYRPKFRELVEKRMAERALKAQNKKKHSKRAVLRSVMFNLLFSVLLIINDIIFNRPEDASSFKEGVTERFEYLLQGAMSIACVQFLALSCTLIFAVF # FSAARAIYRGCRQRRVVADEESRLAPTDMAEVEAEGQKTFALEEKLVDLSDGFDVIYEKMETYAAPPAVEAEAIEEPLIKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g674 ### # start gene g675 Scaffold_1 AUGUSTUS gene 3418715 3419128 0.76 - . g675 Scaffold_1 AUGUSTUS transcript 3418715 3419128 0.76 - . g675.t1 Scaffold_1 AUGUSTUS stop_codon 3418715 3418717 . - 0 transcript_id "g675.t1"; gene_id "g675"; Scaffold_1 AUGUSTUS CDS 3418715 3419128 0.76 - 0 transcript_id "g675.t1"; gene_id "g675"; Scaffold_1 AUGUSTUS start_codon 3419126 3419128 . - 0 transcript_id "g675.t1"; gene_id "g675"; # protein sequence = [MKTLLLAMISPGKSRGTREGAIRGLIGVGKEAVRKGLVDSGGAKVVGSEVQGHEMGDWVEDEALTKAVLDALRVLHPP # SDSEMTDSLNLNNEADLQVLARLHEVLGEFFAQKVVGDAAWAKAILGENPNDDLPVMVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g675 ### # start gene g676 Scaffold_1 AUGUSTUS gene 3437899 3438575 0.22 + . g676 Scaffold_1 AUGUSTUS transcript 3437899 3438575 0.22 + . g676.t1 Scaffold_1 AUGUSTUS start_codon 3437899 3437901 . + 0 transcript_id "g676.t1"; gene_id "g676"; Scaffold_1 AUGUSTUS CDS 3437899 3438067 0.36 + 0 transcript_id "g676.t1"; gene_id "g676"; Scaffold_1 AUGUSTUS CDS 3438139 3438575 0.58 + 2 transcript_id "g676.t1"; gene_id "g676"; Scaffold_1 AUGUSTUS stop_codon 3438573 3438575 . + 0 transcript_id "g676.t1"; gene_id "g676"; # protein sequence = [MSLIREVETHDMQRVLVLTGPAGTAKSSTIRVLSQELKFEIIEWKSSTSESFTNATGLWVSDDTIFTKFRLFLERASQ # CQSVFSSSSTPNPRKRPLPSSSLSSSNSNPTPIQRLILLEDLPNVLHSNTRSQFHDVIRSLVENQDPNPVPVVIILSDSGMRGEAGDERLASGVWERD # QDSAVDIRSILPKDVLNGPYVDEIR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g676 ### # start gene g677 Scaffold_1 AUGUSTUS gene 3443565 3444576 0.98 + . g677 Scaffold_1 AUGUSTUS transcript 3443565 3444576 0.98 + . g677.t1 Scaffold_1 AUGUSTUS start_codon 3443565 3443567 . + 0 transcript_id "g677.t1"; gene_id "g677"; Scaffold_1 AUGUSTUS CDS 3443565 3443687 0.98 + 0 transcript_id "g677.t1"; gene_id "g677"; Scaffold_1 AUGUSTUS CDS 3443753 3443973 1 + 0 transcript_id "g677.t1"; gene_id "g677"; Scaffold_1 AUGUSTUS CDS 3444081 3444576 1 + 1 transcript_id "g677.t1"; gene_id "g677"; Scaffold_1 AUGUSTUS stop_codon 3444574 3444576 . + 0 transcript_id "g677.t1"; gene_id "g677"; # protein sequence = [MSYNNNNNNNNSDFGSNDSYGSNNNSNSESVRAIETPALAVSSGNNSSYGSKNSNSYGSAGNDNSYGSRANNSSDSYG # SSGNHGSRNSNNSNSYGLAGNNDSYGSKNDNNNDTYGSNNKNSYGSNNTDAYGSSNNDSYGSNNNDSYGSLNNNSHGSNTKDSYAASNNNSYGSNTKD # SYGGSNNDDSYGSSNNDSYGSSNNNRNNDSNNSSTYGNNDSYGSNSSNSNNQSGNQNQSSTNSYIEKGVAYAAEKAGYNLVCLLLSFPKLYSAETSLS # GLANG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g677 ### # start gene g678 Scaffold_1 AUGUSTUS gene 3447725 3448910 0.48 + . g678 Scaffold_1 AUGUSTUS transcript 3447725 3448910 0.48 + . g678.t1 Scaffold_1 AUGUSTUS start_codon 3447725 3447727 . + 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_1 AUGUSTUS CDS 3447725 3448108 0.49 + 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_1 AUGUSTUS CDS 3448161 3448205 0.85 + 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_1 AUGUSTUS CDS 3448302 3448910 0.98 + 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_1 AUGUSTUS stop_codon 3448908 3448910 . + 0 transcript_id "g678.t1"; gene_id "g678"; # protein sequence = [MPDSPIQQNLPISNADMLIHDEQDDHDGEEISQLSGQLLFQNQMPARATSDTDPFGSSPLPPLTPTPSPIPSLSSPLQ # SRSDISDERNNLQIVMYNGQQLHLSQGIASHLQNLPPMPPSYHHYSANVSSRPPGPSMQPQIHLQGSTSPNSTPNRNNRGRGRGRSRGHQPENHNQVH # ENNEEQNHNPHYREQYAPAGPLPLAMQPIQNDGVYNELSLGKMEIKCSNCKAFHWKAEMLTTSRGEEKLFGTCCLSGKVRLPLLEEPPVELLQLFNGE # DHNSQHFLENIRTYNAAYAFVSLGLKLQPQNDPELPQTGVKQFKIKGELWHSLGSLLPEPGKILSMPNYIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g678 ### # start gene g679 Scaffold_1 AUGUSTUS gene 3449710 3450330 0.26 + . g679 Scaffold_1 AUGUSTUS transcript 3449710 3450330 0.26 + . g679.t1 Scaffold_1 AUGUSTUS start_codon 3449710 3449712 . + 0 transcript_id "g679.t1"; gene_id "g679"; Scaffold_1 AUGUSTUS CDS 3449710 3450330 0.26 + 0 transcript_id "g679.t1"; gene_id "g679"; Scaffold_1 AUGUSTUS stop_codon 3450328 3450330 . + 0 transcript_id "g679.t1"; gene_id "g679"; # protein sequence = [MAISRHFGKPDLFMTITANPNASETKDALLQGQQANDRPDLIARVFREKVRLMLKLIDNGSFGKCRGRVHTIEFQKRG # LPHIHILIFLHPSARLEDSHKIDQLISAQLPDPETQPRLFRLVEKLMIHGPCGALNPSASCMKDGKCSKGFPKSFQEQTTLSENGYTIYARPNNGRFC # IKKVNGQDIQVDNTWVVPYPPWGLMQSEVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g679 ### # start gene g680 Scaffold_1 AUGUSTUS gene 3450408 3451526 0.5 + . g680 Scaffold_1 AUGUSTUS transcript 3450408 3451526 0.5 + . g680.t1 Scaffold_1 AUGUSTUS start_codon 3450408 3450410 . + 0 transcript_id "g680.t1"; gene_id "g680"; Scaffold_1 AUGUSTUS CDS 3450408 3451526 0.5 + 0 transcript_id "g680.t1"; gene_id "g680"; Scaffold_1 AUGUSTUS stop_codon 3451524 3451526 . + 0 transcript_id "g680.t1"; gene_id "g680"; # protein sequence = [MGIGTNQDEITLYLDSRYVSASEACWRLFHYELHQEKPNVVRLAVHDENGQYITFKPNDPRPVQDIAEAEGRKDSTLL # GFFKVNKQEKEKAESDPENASTEARSLLYQEFPSKWVWQVDKRRWKIRERNISAIGRMYFVHPGAGNQFYVRLLLTVIRGPTSFADLRTYNGIEYDSF # KQACLARGLLEDDGEWKDCLEDARHMQTGSSLRSLFATILKDCHPQQPGVLWEQFREYLCDDLHYHLQTSGILHNPTQQQVENYGLYLIDQILFHAGI # FEGLKLYEGMPLPDYALWNTVLGNRLVAEQMAFDPQEQQQKAAENIAMLNVGQRNAFDKVMNAITSNHPQMFFYMDLLELERPLHIKHSVTCSGVYQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g680 ### # start gene g681 Scaffold_1 AUGUSTUS gene 3452178 3452756 0.57 + . g681 Scaffold_1 AUGUSTUS transcript 3452178 3452756 0.57 + . g681.t1 Scaffold_1 AUGUSTUS start_codon 3452178 3452180 . + 0 transcript_id "g681.t1"; gene_id "g681"; Scaffold_1 AUGUSTUS CDS 3452178 3452756 0.57 + 0 transcript_id "g681.t1"; gene_id "g681"; Scaffold_1 AUGUSTUS stop_codon 3452754 3452756 . + 0 transcript_id "g681.t1"; gene_id "g681"; # protein sequence = [MICLNALAGNMSTYHSADSIGANEGEDNNNEFQYPVEYLNSINGSGLPLAKLELKIGAPIMVLRNLDPSSGICNGTRE # LRAILTKCTTRVLEARILGGDYSGKLILIPRITLSPSDVDLPFVLKRQFPVRLAFAMSINKSQGQSVKFVGLNLQTPVFTHGQLYVALSRSTTKAGVK # VLFHEGKFHNAFDASL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g681 ### # start gene g682 Scaffold_1 AUGUSTUS gene 3460711 3461184 0.93 + . g682 Scaffold_1 AUGUSTUS transcript 3460711 3461184 0.93 + . g682.t1 Scaffold_1 AUGUSTUS start_codon 3460711 3460713 . + 0 transcript_id "g682.t1"; gene_id "g682"; Scaffold_1 AUGUSTUS CDS 3460711 3461184 0.93 + 0 transcript_id "g682.t1"; gene_id "g682"; Scaffold_1 AUGUSTUS stop_codon 3461182 3461184 . + 0 transcript_id "g682.t1"; gene_id "g682"; # protein sequence = [MSKERPSSSRLESKKQKSAFSRGNMTQAQKSSQAASSTVIMVAAGQCLMSIPEQSFGDEVVSSVRTPEGRQPAVQEPP # PVEPVMGPTQRRYTSMGYAQSASSPMGGFAYSLPGEREDLPLDRLPQLDMGVLNAGGRVSGQVAAIERIQGESRDPLTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g682 ### # start gene g683 Scaffold_1 AUGUSTUS gene 3465669 3466695 0.62 - . g683 Scaffold_1 AUGUSTUS transcript 3465669 3466695 0.62 - . g683.t1 Scaffold_1 AUGUSTUS stop_codon 3465669 3465671 . - 0 transcript_id "g683.t1"; gene_id "g683"; Scaffold_1 AUGUSTUS CDS 3465669 3466020 0.99 - 1 transcript_id "g683.t1"; gene_id "g683"; Scaffold_1 AUGUSTUS CDS 3466124 3466695 0.62 - 0 transcript_id "g683.t1"; gene_id "g683"; Scaffold_1 AUGUSTUS start_codon 3466693 3466695 . - 0 transcript_id "g683.t1"; gene_id "g683"; # protein sequence = [MVTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFSGLSVKRSPWNFTIPLDI # IRKPMGRLSVSIRLSNSTSGSIVPTNRMTGRLYFRSPSSPITTLPMLPLVLLHSSLTKDTTQITVRPEVDMKSDLARDFVVNSMNSTFLREEILLAQS # RYKEQADRKRISHPDRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYE # GTDDEFSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g683 ### # start gene g684 Scaffold_1 AUGUSTUS gene 3470553 3471613 0.41 + . g684 Scaffold_1 AUGUSTUS transcript 3470553 3471613 0.41 + . g684.t1 Scaffold_1 AUGUSTUS start_codon 3470553 3470555 . + 0 transcript_id "g684.t1"; gene_id "g684"; Scaffold_1 AUGUSTUS CDS 3470553 3470719 0.57 + 0 transcript_id "g684.t1"; gene_id "g684"; Scaffold_1 AUGUSTUS CDS 3470811 3470977 0.48 + 1 transcript_id "g684.t1"; gene_id "g684"; Scaffold_1 AUGUSTUS CDS 3471081 3471613 0.49 + 2 transcript_id "g684.t1"; gene_id "g684"; Scaffold_1 AUGUSTUS stop_codon 3471611 3471613 . + 0 transcript_id "g684.t1"; gene_id "g684"; # protein sequence = [MITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAENRGHINLPFAADVPKTDRNYLQA # LKPKVEDEFKDLLGIKIRKFDPRELTENNSKWLPVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEF # TKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHRED # DVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g684 ### # start gene g685 Scaffold_1 AUGUSTUS gene 3471643 3473080 0.35 + . g685 Scaffold_1 AUGUSTUS transcript 3471643 3473080 0.35 + . g685.t1 Scaffold_1 AUGUSTUS start_codon 3471643 3471645 . + 0 transcript_id "g685.t1"; gene_id "g685"; Scaffold_1 AUGUSTUS CDS 3471643 3472308 0.43 + 0 transcript_id "g685.t1"; gene_id "g685"; Scaffold_1 AUGUSTUS CDS 3472355 3473080 0.4 + 0 transcript_id "g685.t1"; gene_id "g685"; Scaffold_1 AUGUSTUS stop_codon 3473078 3473080 . + 0 transcript_id "g685.t1"; gene_id "g685"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRDQADMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVA # YEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQ # NKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDSKGNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g685 ### # start gene g686 Scaffold_1 AUGUSTUS gene 3473404 3474709 0.8 + . g686 Scaffold_1 AUGUSTUS transcript 3473404 3474709 0.8 + . g686.t1 Scaffold_1 AUGUSTUS start_codon 3473404 3473406 . + 0 transcript_id "g686.t1"; gene_id "g686"; Scaffold_1 AUGUSTUS CDS 3473404 3473426 0.8 + 0 transcript_id "g686.t1"; gene_id "g686"; Scaffold_1 AUGUSTUS CDS 3473482 3474709 0.88 + 1 transcript_id "g686.t1"; gene_id "g686"; Scaffold_1 AUGUSTUS stop_codon 3474707 3474709 . + 0 transcript_id "g686.t1"; gene_id "g686"; # protein sequence = [MEGSSLNPLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRY # ESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFR # IERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNI # PIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQL # SRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTIFYEMKYHT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g686 ### # start gene g687 Scaffold_1 AUGUSTUS gene 3481035 3482752 0.21 - . g687 Scaffold_1 AUGUSTUS transcript 3481035 3482752 0.21 - . g687.t1 Scaffold_1 AUGUSTUS stop_codon 3481035 3481037 . - 0 transcript_id "g687.t1"; gene_id "g687"; Scaffold_1 AUGUSTUS CDS 3481035 3481882 0.82 - 2 transcript_id "g687.t1"; gene_id "g687"; Scaffold_1 AUGUSTUS CDS 3482162 3482427 0.36 - 1 transcript_id "g687.t1"; gene_id "g687"; Scaffold_1 AUGUSTUS CDS 3482595 3482752 0.69 - 0 transcript_id "g687.t1"; gene_id "g687"; Scaffold_1 AUGUSTUS start_codon 3482750 3482752 . - 0 transcript_id "g687.t1"; gene_id "g687"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTHSPRTGNPQRRAASESPRDPPPHFD # LDTGDHDDQDPPVDPDDPGRRTTIDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPGGPLGQPEWFVPDILDPDLDSLPAWTSSFKALVKELQD # NFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYVKKFFVLTIVIGNARKLESVRLV # SLLLRNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKH # QIADCNKRKARESKGRAAEVEETPKQPLRLLKRNRKTSPQLLFPGTKRELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g687 ### # start gene g688 Scaffold_1 AUGUSTUS gene 3483458 3483724 0.59 + . g688 Scaffold_1 AUGUSTUS transcript 3483458 3483724 0.59 + . g688.t1 Scaffold_1 AUGUSTUS start_codon 3483458 3483460 . + 0 transcript_id "g688.t1"; gene_id "g688"; Scaffold_1 AUGUSTUS CDS 3483458 3483724 0.59 + 0 transcript_id "g688.t1"; gene_id "g688"; Scaffold_1 AUGUSTUS stop_codon 3483722 3483724 . + 0 transcript_id "g688.t1"; gene_id "g688"; # protein sequence = [MPEEHIAQVVLEWPPCHDKTEVRAFLGTASQLRMFIATLLGKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINLIGMFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g688 ### # start gene g689 Scaffold_1 AUGUSTUS gene 3484096 3484778 0.24 + . g689 Scaffold_1 AUGUSTUS transcript 3484096 3484778 0.24 + . g689.t1 Scaffold_1 AUGUSTUS start_codon 3484096 3484098 . + 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_1 AUGUSTUS CDS 3484096 3484195 0.27 + 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_1 AUGUSTUS CDS 3484258 3484778 0.83 + 2 transcript_id "g689.t1"; gene_id "g689"; Scaffold_1 AUGUSTUS stop_codon 3484776 3484778 . + 0 transcript_id "g689.t1"; gene_id "g689"; # protein sequence = [MANKTSRSNPEDYVDENGGEPINLLWEMGKRKSPQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNCSL # LLTKNLLQNNPYPEAHRSSEGNRLDELIPLIEKYLSNPSDESLGEMSKDERIKFIRLIKKFKWTTKEGCTIEILINLIKPQISGEKEKRMHMLNSAHD # CLGHKGVFATNDFCRNDSGGLTYIKTWNGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g689 ### # start gene g690 Scaffold_1 AUGUSTUS gene 3487000 3487642 0.82 - . g690 Scaffold_1 AUGUSTUS transcript 3487000 3487642 0.82 - . g690.t1 Scaffold_1 AUGUSTUS stop_codon 3487000 3487002 . - 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_1 AUGUSTUS CDS 3487000 3487209 0.91 - 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_1 AUGUSTUS CDS 3487249 3487416 1 - 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_1 AUGUSTUS CDS 3487475 3487642 0.9 - 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_1 AUGUSTUS start_codon 3487640 3487642 . - 0 transcript_id "g690.t1"; gene_id "g690"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLEKPVTLRSHVRQVSNLTARQSI # IDTLCLGHKLFPDIVSDSHFEQHLKFMAFANDAHSFQNTFIRNRLLNRARSVHSDHEASTRADNSRFIRKSKKKATRFASSRDVKREPRSVRFDSDVE # VNPQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g690 ### # start gene g691 Scaffold_1 AUGUSTUS gene 3488657 3489315 0.45 - . g691 Scaffold_1 AUGUSTUS transcript 3488657 3489315 0.45 - . g691.t1 Scaffold_1 AUGUSTUS stop_codon 3488657 3488659 . - 0 transcript_id "g691.t1"; gene_id "g691"; Scaffold_1 AUGUSTUS CDS 3488657 3489204 0.95 - 2 transcript_id "g691.t1"; gene_id "g691"; Scaffold_1 AUGUSTUS CDS 3489267 3489315 0.45 - 0 transcript_id "g691.t1"; gene_id "g691"; Scaffold_1 AUGUSTUS start_codon 3489313 3489315 . - 0 transcript_id "g691.t1"; gene_id "g691"; # protein sequence = [MDALNALHKASTSSTHNLANSLRRATDLNDQLKQIGSLFDTARELFLRSILDLQNAGEDPIVVLEALKTAEPNRRAIT # LNEWTLMATLFRWPSPFNLSGLDFDNRTPGEWIELLRSIQSGESTVHIDEHGHLVEASPPPDSATEALEGLKEVERGSADEGTSSPVGGSVPMELDLP # TIESLAERALSPEKGAESAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g691 ### # start gene g692 Scaffold_1 AUGUSTUS gene 3489913 3490617 0.3 - . g692 Scaffold_1 AUGUSTUS transcript 3489913 3490617 0.3 - . g692.t1 Scaffold_1 AUGUSTUS stop_codon 3489913 3489915 . - 0 transcript_id "g692.t1"; gene_id "g692"; Scaffold_1 AUGUSTUS CDS 3489913 3490349 0.58 - 2 transcript_id "g692.t1"; gene_id "g692"; Scaffold_1 AUGUSTUS CDS 3490410 3490617 0.56 - 0 transcript_id "g692.t1"; gene_id "g692"; Scaffold_1 AUGUSTUS start_codon 3490615 3490617 . - 0 transcript_id "g692.t1"; gene_id "g692"; # protein sequence = [MMRLAPSKELDVFAPLRGKGSPGASKAVSPPKVSDVISPPPVTKAQAVPPRALRRNREIESLKADASSFLASPRSTHS # KDSDNELLSGFPLVDEAPRASSSAKVSVGRKEPKSKTTVKVVEDPKADHPPLAGMAYKRVRLPPRSRKNTSIASKGKARQIVVTDEDSTSNEVESEDE # DEDEDTAPPPKRLKTTSSISGKIFILHFLSHFINSIRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g692 ### # start gene g693 Scaffold_1 AUGUSTUS gene 3494956 3496479 0.74 - . g693 Scaffold_1 AUGUSTUS transcript 3494956 3496479 0.74 - . g693.t1 Scaffold_1 AUGUSTUS stop_codon 3494956 3494958 . - 0 transcript_id "g693.t1"; gene_id "g693"; Scaffold_1 AUGUSTUS CDS 3494956 3496479 0.74 - 0 transcript_id "g693.t1"; gene_id "g693"; Scaffold_1 AUGUSTUS start_codon 3496477 3496479 . - 0 transcript_id "g693.t1"; gene_id "g693"; # protein sequence = [MFRARTVLRATRTLTLRPAINSSFIRSNSSNSSRPEDLPPAQTHSVQEGFAQGPIFVLNVAKRFIKFFIIGGVSLGLT # TGLLFEGTHIWVENVEFALPQDDEETRRWEWNLERENWTGDFEAAGTDPALGIRGRHLVRAAWMAQHWGVDQSTVIVSSDSVKNDDGLLGPRGLVIID # PRLVRAENFLRDVILIAEQKSIEGKLRPWTMTQLLSLHASVLDRMGSESMITAKAQYERAWSAQPFIAPQSARIALKLGDLNRRLGDDNGALAWLNRA # IHITQSLSESSGVPPSMPSSPYAQRSLLYALSSLSACYATTGKLAEAQSTAEASLDLIRSVRQPESIASISPPHALHALTLLQRSSVLAIHLAEVLYA # QNKPTIVSTQWLSTAAESSERVIRVLTGSPLNTGTDRVLVTPVNTIQPSYLNNASLKRPATSLYRDSRRTAAEAWNLTGILLEIKDPKAALAAYEHAV # HLAGSSEEHGKPADKTLKVDWEIIWGNYTRLKSRIQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g693 ### # start gene g694 Scaffold_1 AUGUSTUS gene 3498836 3499183 0.3 + . g694 Scaffold_1 AUGUSTUS transcript 3498836 3499183 0.3 + . g694.t1 Scaffold_1 AUGUSTUS start_codon 3498836 3498838 . + 0 transcript_id "g694.t1"; gene_id "g694"; Scaffold_1 AUGUSTUS CDS 3498836 3499183 0.3 + 0 transcript_id "g694.t1"; gene_id "g694"; Scaffold_1 AUGUSTUS stop_codon 3499181 3499183 . + 0 transcript_id "g694.t1"; gene_id "g694"; # protein sequence = [MSNGRRLGLYYLSPNRTRERGIRVRGRWVSTRKSHVLPLFLTNRVSFFIKATKRQSDSQGVGSAFDGSQGVDSEDILG # IPQIGFGSFQLFPDQNSCMSIVHSLPAFGSLILTEKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g694 ### # start gene g695 Scaffold_1 AUGUSTUS gene 3499322 3499635 0.64 + . g695 Scaffold_1 AUGUSTUS transcript 3499322 3499635 0.64 + . g695.t1 Scaffold_1 AUGUSTUS start_codon 3499322 3499324 . + 0 transcript_id "g695.t1"; gene_id "g695"; Scaffold_1 AUGUSTUS CDS 3499322 3499442 0.65 + 0 transcript_id "g695.t1"; gene_id "g695"; Scaffold_1 AUGUSTUS CDS 3499496 3499635 0.95 + 2 transcript_id "g695.t1"; gene_id "g695"; Scaffold_1 AUGUSTUS stop_codon 3499633 3499635 . + 0 transcript_id "g695.t1"; gene_id "g695"; # protein sequence = [MEYRFDKPVSLLGFGLVTQTNAPDFVPFNSTVAPFASDTTSTVSKASSTSSSASANSTQTFGVTDSEQATAYSTWLNS # ELKSSYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g695 ### # start gene g696 Scaffold_1 AUGUSTUS gene 3502432 3503173 0.49 + . g696 Scaffold_1 AUGUSTUS transcript 3502432 3503173 0.49 + . g696.t1 Scaffold_1 AUGUSTUS start_codon 3502432 3502434 . + 0 transcript_id "g696.t1"; gene_id "g696"; Scaffold_1 AUGUSTUS CDS 3502432 3502458 0.61 + 0 transcript_id "g696.t1"; gene_id "g696"; Scaffold_1 AUGUSTUS CDS 3502515 3502647 0.52 + 0 transcript_id "g696.t1"; gene_id "g696"; Scaffold_1 AUGUSTUS CDS 3502791 3503173 0.57 + 2 transcript_id "g696.t1"; gene_id "g696"; Scaffold_1 AUGUSTUS stop_codon 3503171 3503173 . + 0 transcript_id "g696.t1"; gene_id "g696"; # protein sequence = [MSIFTVRRMLPFFDIVIYSFHYLLDPKVAEQVSKEMSKDAIVVFDEAHNIGQTLSGNIILRCVIQSEFILRIKVTDAA # KLQNEYAKLVEGLQEGSEDPEDNDGFMTTPGKTLPFIKETENPSSKTRYSQVLPDDLLHEAIPGNIRKAEHFVAFLKRFVEYLKVYSANFGMSANVTQ # LNVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g696 ### # start gene g697 Scaffold_1 AUGUSTUS gene 3509877 3510643 0.97 + . g697 Scaffold_1 AUGUSTUS transcript 3509877 3510643 0.97 + . g697.t1 Scaffold_1 AUGUSTUS start_codon 3509877 3509879 . + 0 transcript_id "g697.t1"; gene_id "g697"; Scaffold_1 AUGUSTUS CDS 3509877 3510203 0.97 + 0 transcript_id "g697.t1"; gene_id "g697"; Scaffold_1 AUGUSTUS CDS 3510311 3510643 0.97 + 0 transcript_id "g697.t1"; gene_id "g697"; Scaffold_1 AUGUSTUS stop_codon 3510641 3510643 . + 0 transcript_id "g697.t1"; gene_id "g697"; # protein sequence = [MTNNDQQKGKSPSISACSFAQAVSAITAIELLVETCKAARDSIFNHPQSTEDPPPLPVLHQDLLSLLSLVYGSVTKLS # LTLKPSSPTYSACLVPLQDYQTTSPPFHIASIEGSSERSRTGDEYLVRTGAVHSVIDIARHADGGLSENNLTAVRRLWFKDAGALEDGVREVVEMIED # VQSGITTESEDGWDELGLEPSQPLTEQELKVAQKVNIVNPLQN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g697 ### # start gene g698 Scaffold_1 AUGUSTUS gene 3512455 3513463 0.71 - . g698 Scaffold_1 AUGUSTUS transcript 3512455 3513463 0.71 - . g698.t1 Scaffold_1 AUGUSTUS stop_codon 3512455 3512457 . - 0 transcript_id "g698.t1"; gene_id "g698"; Scaffold_1 AUGUSTUS CDS 3512455 3513327 0.91 - 0 transcript_id "g698.t1"; gene_id "g698"; Scaffold_1 AUGUSTUS CDS 3513404 3513463 0.73 - 0 transcript_id "g698.t1"; gene_id "g698"; Scaffold_1 AUGUSTUS start_codon 3513461 3513463 . - 0 transcript_id "g698.t1"; gene_id "g698"; # protein sequence = [MDEVNFCAIKIIPFSELQTADRAPFSPPQKRTRYSRSPTEPEEDILIDVDDDRSEGLLSPSRSFTPPQQQKSSSKKRE # SYPSSTRSRESKKRWADDSGDEFDVGVMSDDLGRGILDERDDDEEFVDDVPKKGKGKSSTAKVKGIKGGKGTKNPRVKGKGQSQEKEITVRDERQGVA # SSSMKIRIKPSVNVDAVPVTNPGMGSVAPDAEKGDGPIPQKKRKLPSIKKNKTAASGTPTTVAKPTASINASSKTTMADGVPSTPAARASAGSQGGDF # NLQDRNVYEMLFKSVRTVVYILLHLLNLVQNLDGRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g698 ### # start gene g699 Scaffold_1 AUGUSTUS gene 3515327 3515782 0.94 - . g699 Scaffold_1 AUGUSTUS transcript 3515327 3515782 0.94 - . g699.t1 Scaffold_1 AUGUSTUS stop_codon 3515327 3515329 . - 0 transcript_id "g699.t1"; gene_id "g699"; Scaffold_1 AUGUSTUS CDS 3515327 3515782 0.94 - 0 transcript_id "g699.t1"; gene_id "g699"; Scaffold_1 AUGUSTUS start_codon 3515780 3515782 . - 0 transcript_id "g699.t1"; gene_id "g699"; # protein sequence = [MCRLSIPFSTSFTDDSLLYSRYSFSATNAAQTSEEEEQELSESVRTISDLFQSNALAPEPVPVPDSLDRVASISAEIA # AAIAQAHQRVFEDDEEESDYEQEMPARETITLNTSGIRGLGEDRLHRADSEFEDERFPQQLRALKNNSNKRKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g699 ### # start gene g700 Scaffold_1 AUGUSTUS gene 3516180 3517154 0.9 - . g700 Scaffold_1 AUGUSTUS transcript 3516180 3517154 0.9 - . g700.t1 Scaffold_1 AUGUSTUS stop_codon 3516180 3516182 . - 0 transcript_id "g700.t1"; gene_id "g700"; Scaffold_1 AUGUSTUS CDS 3516180 3517154 0.9 - 0 transcript_id "g700.t1"; gene_id "g700"; Scaffold_1 AUGUSTUS start_codon 3517152 3517154 . - 0 transcript_id "g700.t1"; gene_id "g700"; # protein sequence = [MESDTLPLDLSDVVHDESLGQDAHPHTSQGQHDSRSTSVFESDSGLLTTLQPPFEEDPEVHSRGQTPTLSSLEMLENE # LVNLLHQNASAAAANAALISAAAQQHQSDRPSTREQETPPATDIGSYLSGLAVVLQAAQAQAQLNDSDRIALDALLSAKDLSVLGDKGNRSTRAAPSF # HSLTAANDSREPSRKRRRRGLEETREDFLYTELHGRSEDDGTEDSGSETRPDDPAANPLPHADFTDINDIFTHLSTQLSAQFEADPAVAPEHCSSKQL # GPQFSHPRIAVPYSPSPPPLASCLSRIPPRKPKSRGRNSRTHMFVNNSTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g700 ### # start gene g701 Scaffold_1 AUGUSTUS gene 3517995 3518441 1 + . g701 Scaffold_1 AUGUSTUS transcript 3517995 3518441 1 + . g701.t1 Scaffold_1 AUGUSTUS start_codon 3517995 3517997 . + 0 transcript_id "g701.t1"; gene_id "g701"; Scaffold_1 AUGUSTUS CDS 3517995 3518441 1 + 0 transcript_id "g701.t1"; gene_id "g701"; Scaffold_1 AUGUSTUS stop_codon 3518439 3518441 . + 0 transcript_id "g701.t1"; gene_id "g701"; # protein sequence = [MSLSSDDHSSRPQQQNGALWGPEDERYYSANASSSSGGRWRYPANFDDAVLPSSGSKRGKKKKEKKDRWARTEDAYSI # SEQQSRKRVKKKKSRSSVAPSVISADDSTAGYPEDPEGGLYGNTQAIEEPRSMETNGQRPTNDDIFSHEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g701 ### # start gene g702 Scaffold_1 AUGUSTUS gene 3525399 3527054 0.74 + . g702 Scaffold_1 AUGUSTUS transcript 3525399 3527054 0.74 + . g702.t1 Scaffold_1 AUGUSTUS start_codon 3525399 3525401 . + 0 transcript_id "g702.t1"; gene_id "g702"; Scaffold_1 AUGUSTUS CDS 3525399 3527054 0.74 + 0 transcript_id "g702.t1"; gene_id "g702"; Scaffold_1 AUGUSTUS stop_codon 3527052 3527054 . + 0 transcript_id "g702.t1"; gene_id "g702"; # protein sequence = [MPFNGIASPVVGINEPVNDNDNTLNASVLPSISLSHSASSSYNASNFACLTVAQKQLVFHALIQSSSILCNDLRKMAS # LHLNLSTRNTYNQHKNKSDLLTDYAQHQCSNYCLIYHAQAEIVKFFSVPSISQFEFLECAKALGLRNYNQKSSNKRKSEHISSSHKRKKVAHSPTPVL # NSTNSDPVIDSEIWPEILTLDEKLAILQESYDAGCNTSIKKVECSFCGTLETVDKICSILCTDLDISLLNTAVQELRSKTKQAKIKAFQQHTISNGCY # QLCIQCKREVRFKTSTDNTSVRDKSQCTFVQLPLRSYANGTWTGDLPDALNGLTFLEEQCIARARATKCMFKLELGPSGQYASRGNVCIFPQDPGPLA # TCFPPPLSQIHDEICVILVGSPDAEITIETLMQTPLLVRRSRIIEALEWLQMNNPLYYDLNLDTMYNNASQYPENGIPIPLKSVIRISSNSEGSSYTA # QANFEQFNENVSSSGMLSSTVVDADHIDSTYQMRKLSALQHLKRGNKPFIKFPSGSTPLSTYRIQNFMHICGQHFFLMVLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g702 ### # start gene g703 Scaffold_1 AUGUSTUS gene 3527265 3527819 0.59 + . g703 Scaffold_1 AUGUSTUS transcript 3527265 3527819 0.59 + . g703.t1 Scaffold_1 AUGUSTUS start_codon 3527265 3527267 . + 0 transcript_id "g703.t1"; gene_id "g703"; Scaffold_1 AUGUSTUS CDS 3527265 3527819 0.59 + 0 transcript_id "g703.t1"; gene_id "g703"; Scaffold_1 AUGUSTUS stop_codon 3527817 3527819 . + 0 transcript_id "g703.t1"; gene_id "g703"; # protein sequence = [MLLCKLSNNTITEFSEKLKKNPFVHPETEGEKAAKQLMKYINYIGENIPGSMSEVQNMREELFSVVHTNGLPHVFLTL # NPSDTNNPIAQLIAGRDIDLNQIFHNLKPHTENLERSTCIAQNPIAAAQFFDISVKNLLHILLGTKRQNRKGVFGEVVVYYGVVEAQGRGSLHISAYL # ARAWLIPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g703 ### # start gene g704 Scaffold_1 AUGUSTUS gene 3528335 3528847 0.88 + . g704 Scaffold_1 AUGUSTUS transcript 3528335 3528847 0.88 + . g704.t1 Scaffold_1 AUGUSTUS start_codon 3528335 3528337 . + 0 transcript_id "g704.t1"; gene_id "g704"; Scaffold_1 AUGUSTUS CDS 3528335 3528847 0.88 + 0 transcript_id "g704.t1"; gene_id "g704"; Scaffold_1 AUGUSTUS stop_codon 3528845 3528847 . + 0 transcript_id "g704.t1"; gene_id "g704"; # protein sequence = [MDTAFVFSALCAAIKLLTENPPMDIDGNLDTYEHSRQFLIKTVNKLIGKRELSGQQIASKLIGTPSCYTNCRYPIFYW # SGMLREIASDIFDIANWNNDNESDMTINDSGNEDLHTSQQNLQQREFDDSFVFLTEKTVQSGKFSLKNHSHNSLFNDFFSDLKSFLTFVLGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g704 ### # start gene g705 Scaffold_1 AUGUSTUS gene 3528955 3529272 0.79 + . g705 Scaffold_1 AUGUSTUS transcript 3528955 3529272 0.79 + . g705.t1 Scaffold_1 AUGUSTUS start_codon 3528955 3528957 . + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_1 AUGUSTUS CDS 3528955 3529272 0.79 + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_1 AUGUSTUS stop_codon 3529270 3529272 . + 0 transcript_id "g705.t1"; gene_id "g705"; # protein sequence = [MNIGDDPRVPVLKGYPIPQSDKIEHHEKYMIAMLALFKPWSHNEQSPLKTPEETWDTAFNTWKNTDLFKSHIKIINNM # QLLYESKDAKLDYSAQRQKRLQSFPTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g705 ### # start gene g706 Scaffold_1 AUGUSTUS gene 3530431 3531420 0.96 + . g706 Scaffold_1 AUGUSTUS transcript 3530431 3531420 0.96 + . g706.t1 Scaffold_1 AUGUSTUS start_codon 3530431 3530433 . + 0 transcript_id "g706.t1"; gene_id "g706"; Scaffold_1 AUGUSTUS CDS 3530431 3531420 0.96 + 0 transcript_id "g706.t1"; gene_id "g706"; Scaffold_1 AUGUSTUS stop_codon 3531418 3531420 . + 0 transcript_id "g706.t1"; gene_id "g706"; # protein sequence = [MRQKGDNVLIDILSRLRTGTCIQADKDILDKYVLSNEACSNETKSLIDITQWITNPENACPLITYTNAARDAHNFESA # KAFARVTGQEFHICHSTDTHGRGKNKKVIKGIAAEAAWKIPVKDAQDLGGKVPYIPGMPVFATENIATELGLSNGSLGTLVSLTYEIHDDRYYAVSAT # VDFPAYKSNDPVHPNRVILKPITQSFKFHLPNSEKLYSATRKQLPLIPAFAFTSPNAQGRSMNVACIDFASCRLIQSAYVMLSRVRSLKGLCILRPFS # INKIRNHISEELRSELKRTENLAAKTAQAAENDLSWYYSRFPAQASRVSTANNSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g706 ### # start gene g707 Scaffold_1 AUGUSTUS gene 3533885 3534256 0.99 + . g707 Scaffold_1 AUGUSTUS transcript 3533885 3534256 0.99 + . g707.t1 Scaffold_1 AUGUSTUS start_codon 3533885 3533887 . + 0 transcript_id "g707.t1"; gene_id "g707"; Scaffold_1 AUGUSTUS CDS 3533885 3534256 0.99 + 0 transcript_id "g707.t1"; gene_id "g707"; Scaffold_1 AUGUSTUS stop_codon 3534254 3534256 . + 0 transcript_id "g707.t1"; gene_id "g707"; # protein sequence = [MTVYEADDFPVTTATANIASNGDVIITVTASRTIHIESDVCSDDVCTAVVFDQSLNYSNVQTYLDGFNIQNVLQMASG # SVVSTHNGVAVVKDDYSYPFAVNITSLNNDGSVCEFQPEFALIHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g707 ### # start gene g708 Scaffold_1 AUGUSTUS gene 3535344 3536321 0.04 - . g708 Scaffold_1 AUGUSTUS transcript 3535344 3536321 0.04 - . g708.t1 Scaffold_1 AUGUSTUS stop_codon 3535344 3535346 . - 0 transcript_id "g708.t1"; gene_id "g708"; Scaffold_1 AUGUSTUS CDS 3535344 3535656 0.63 - 1 transcript_id "g708.t1"; gene_id "g708"; Scaffold_1 AUGUSTUS CDS 3535694 3536124 0.3 - 0 transcript_id "g708.t1"; gene_id "g708"; Scaffold_1 AUGUSTUS CDS 3536181 3536321 0.08 - 0 transcript_id "g708.t1"; gene_id "g708"; Scaffold_1 AUGUSTUS start_codon 3536319 3536321 . - 0 transcript_id "g708.t1"; gene_id "g708"; # protein sequence = [MKHRLGAMVVATSKQGEPVTADDVGVTGALTVLMKDAIKPNLMQTLQGTPVFVHAGPFANIAHGNSSILADRVALKLA # GTEEGDSSDRVGYVLTEGGFGADMGMEKFCNIKCRVSGLKPDATIIVATTRALKMHGGGPDVTPGKPLHETYTKEDLVTLKEGCKNLVQHIKNSRKFG # IKVIVAINQFALVFLSDSAAELALVRDESLAGGADAAVVSNHWAEGGKGARALAEAVITTCEGPSNFDFLYDLNLPIEEKITIISKEIYGADGIELSD # LARQQVETYTRQGYAGLPSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g708 ### # start gene g709 Scaffold_1 AUGUSTUS gene 3537151 3538289 0.42 - . g709 Scaffold_1 AUGUSTUS transcript 3537151 3538289 0.42 - . g709.t1 Scaffold_1 AUGUSTUS stop_codon 3537151 3537153 . - 0 transcript_id "g709.t1"; gene_id "g709"; Scaffold_1 AUGUSTUS CDS 3537151 3537548 0.49 - 2 transcript_id "g709.t1"; gene_id "g709"; Scaffold_1 AUGUSTUS CDS 3537594 3537720 0.69 - 0 transcript_id "g709.t1"; gene_id "g709"; Scaffold_1 AUGUSTUS CDS 3537779 3538016 0.96 - 1 transcript_id "g709.t1"; gene_id "g709"; Scaffold_1 AUGUSTUS CDS 3538072 3538289 0.99 - 0 transcript_id "g709.t1"; gene_id "g709"; Scaffold_1 AUGUSTUS start_codon 3538287 3538289 . - 0 transcript_id "g709.t1"; gene_id "g709"; # protein sequence = [MKAKAAQEVGIQYRHVALPAEATVEEVVETVKTLNNDDAVSGILVQLPLGEHVTAEGERKVTEAVKPEKDVDGFHAYN # IGHLSSRASDPLFSPCTPTAVIRLLESTGQSISGANAVVLGRSDIVGSPVASMLRNRDATVTQCHSRTKNIEAIVKNSDIVVSAIGKAELVKGSWIKP # GAVVIDVGINYIPGESHTDSSKKSGQRLVGDVEYSSAAEVASYITPVPGGVGPMTVAILMENTLKSAERLWELSHERKVQPLPLNILEKVPSDIEIAM # GQTPKPITQLAQEIGLSPDELESYGKYKAKVELSVLDRLAHRTDGKYIVVAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g709 ### # start gene g710 Scaffold_1 AUGUSTUS gene 3538656 3539620 0.21 + . g710 Scaffold_1 AUGUSTUS transcript 3538656 3539620 0.21 + . g710.t1 Scaffold_1 AUGUSTUS start_codon 3538656 3538658 . + 0 transcript_id "g710.t1"; gene_id "g710"; Scaffold_1 AUGUSTUS CDS 3538656 3538662 0.35 + 0 transcript_id "g710.t1"; gene_id "g710"; Scaffold_1 AUGUSTUS CDS 3538926 3539059 0.7 + 2 transcript_id "g710.t1"; gene_id "g710"; Scaffold_1 AUGUSTUS CDS 3539138 3539620 0.62 + 0 transcript_id "g710.t1"; gene_id "g710"; Scaffold_1 AUGUSTUS stop_codon 3539618 3539620 . + 0 transcript_id "g710.t1"; gene_id "g710"; # protein sequence = [MLKTKSTSAHEEKKKDEPNDEPEKEAHPPCPDTEKLKAKEAEVVDLTADFLNLQRNAAREKEQTRDFAITRFASDLLE # TVDVLALALKSVPAPALAAETTPASEPLASSSSSKTDTPPPKSAQEYLQELHTGVEMTQRQLLQTLFKYHVKPFDPTGDKFDPNRHEALYQAPIPGKE # PGTVLDCQKPGYMIKDRVLRAAQVGVVQDIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g710 ### # start gene g711 Scaffold_1 AUGUSTUS gene 3542421 3542882 0.76 - . g711 Scaffold_1 AUGUSTUS transcript 3542421 3542882 0.76 - . g711.t1 Scaffold_1 AUGUSTUS stop_codon 3542421 3542423 . - 0 transcript_id "g711.t1"; gene_id "g711"; Scaffold_1 AUGUSTUS CDS 3542421 3542882 0.76 - 0 transcript_id "g711.t1"; gene_id "g711"; Scaffold_1 AUGUSTUS start_codon 3542880 3542882 . - 0 transcript_id "g711.t1"; gene_id "g711"; # protein sequence = [MLSLPSNAASTNPADPTTSGVWNYLTPKRTQALIARESAVAVREAEVARREAELLAGAPGGVIATPSPVLCPPCMAAT # TVETITGPIQTVIKEIVKEDSLTPPGWSSPRFDDILDRELKIAEREREISKREEGVNRREHDASRRESWIMEQLM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g711 ### # start gene g712 Scaffold_1 AUGUSTUS gene 3545821 3546804 0.62 + . g712 Scaffold_1 AUGUSTUS transcript 3545821 3546804 0.62 + . g712.t1 Scaffold_1 AUGUSTUS start_codon 3545821 3545823 . + 0 transcript_id "g712.t1"; gene_id "g712"; Scaffold_1 AUGUSTUS CDS 3545821 3546804 0.62 + 0 transcript_id "g712.t1"; gene_id "g712"; Scaffold_1 AUGUSTUS stop_codon 3546802 3546804 . + 0 transcript_id "g712.t1"; gene_id "g712"; # protein sequence = [MKEAYARLQEFDQNTPFEFGNLDTTLEPNISILKNLLRELKLKLMEAESLRNMVESNFKKASVEQAQVESDGDIIMNA # PSSTFQKQDGYSTPPHVSLSTEKHLVLLQGMLDRISKQVASVGSNVMEQEDVIKSVIQSSHEIVTSSESIVDGIHQDIEHFDDELSELTEMTAETIAE # DNRLDIEYQKLQKEREDQEIELQKVSQPLLQPMTNFSDHAKLMGCLEKLEKEREKDESDLATLSTALTAYMEKPTMSPSSSPFIPEDIVVALEEQITP # LIRNAIKPHIEILRSELEQEITKREMETSSTLSPIFTVTHQALQSVSNATSKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g712 ### # start gene g713 Scaffold_1 AUGUSTUS gene 3555541 3556791 0.97 - . g713 Scaffold_1 AUGUSTUS transcript 3555541 3556791 0.97 - . g713.t1 Scaffold_1 AUGUSTUS stop_codon 3555541 3555543 . - 0 transcript_id "g713.t1"; gene_id "g713"; Scaffold_1 AUGUSTUS CDS 3555541 3556791 0.97 - 0 transcript_id "g713.t1"; gene_id "g713"; Scaffold_1 AUGUSTUS start_codon 3556789 3556791 . - 0 transcript_id "g713.t1"; gene_id "g713"; # protein sequence = [MPLWCTSSDSPPGSQLSHHRIVRIPPGESVVLNSAERAPYLLYIEILNDDLDFDPQKRINKDVLKKIVLREDQRAPGP # KDLNPFTPLLPFQQHKAKSESFQESDVYDGSSVLLGNSLAATPPTPTTPNDDEEMDLVEQLYGPGQSLLSQKIDLSESIVLPPPPKNKDLDRVAWSRP # SSVHASPSLDNIDRHTPRIPPPLNLHLDNTISQPSPLPVETPYSISLDEYSERMRTAAIMLAQLNANLVREPTNGSAVPDGAHSSGPLSWIPGSSWLS # NSNEPPKTAPHLTGRGTGSQDFGKPQPSRMRLQASEASAIRDRIMQEMLALEEERMAHMRENRETESIIRVGDISGGMKTAEDEGIIRRELSKVDPSA # MVFSESWTAKKVRWKRFPYVSSKLDVDDVITESNSACIALWSSW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g713 ### # start gene g714 Scaffold_1 AUGUSTUS gene 3556983 3557759 0.58 - . g714 Scaffold_1 AUGUSTUS transcript 3556983 3557759 0.58 - . g714.t1 Scaffold_1 AUGUSTUS stop_codon 3556983 3556985 . - 0 transcript_id "g714.t1"; gene_id "g714"; Scaffold_1 AUGUSTUS CDS 3556983 3557759 0.58 - 0 transcript_id "g714.t1"; gene_id "g714"; Scaffold_1 AUGUSTUS start_codon 3557757 3557759 . - 0 transcript_id "g714.t1"; gene_id "g714"; # protein sequence = [MQAALKDLSASPHDSPSFIICQRVLHKCHEIIFGDLPPPTTPYSTINLPFRSLFPRKKIRPHAEPAIIGMGLVLAGVP # AMPRLTEIMGEVAIEQGRAEDKATVEVKRSVESDDDDMAVAPSRIKSSVSMDEEPEPESNEDSPPSPDSASSEPAILTRRRAMGPAQTVPALPLHLRG # LQRSRRSEDPLGQLDAEHKETVTPYQSSPSISSARPPLRTASHSYADTLLQTYDTSSQTHLLKGHYCRSEVGQIKPQLSKFY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g714 ### # start gene g715 Scaffold_1 AUGUSTUS gene 3558312 3559850 0.97 + . g715 Scaffold_1 AUGUSTUS transcript 3558312 3559850 0.97 + . g715.t1 Scaffold_1 AUGUSTUS start_codon 3558312 3558314 . + 0 transcript_id "g715.t1"; gene_id "g715"; Scaffold_1 AUGUSTUS CDS 3558312 3559850 0.97 + 0 transcript_id "g715.t1"; gene_id "g715"; Scaffold_1 AUGUSTUS stop_codon 3559848 3559850 . + 0 transcript_id "g715.t1"; gene_id "g715"; # protein sequence = [MANKSLNSPSFSRFSRMGFGLRIKSQSASPSPRIRDSAKSNQDSDWYIPYNGPYEPPRDTYVRSKEPLRDSWGDPVVD # AQAENDEENPIFSDAELHTRYGNWNPADERKGRPRARTQSSSSGTVDPSRASMATGRRSTVSHVGNPPPVPSYISLAGGVGESPVPNPRAVRETASTK # RKSLASLFTFNSTSRKLSSSSKAERQHTPNTPSRLSDQGLHSIGLSKLPQTPHLPSDPVAAVELFGASAATGDEEYYNSYYSSLINQPQNNHQTARQP # PDTSFQHTLQQPSSPQSLPNSEPSSATHPYAYAYSSSTPPAAETPRSAPPPKTHFERTPIPHIYPEKSRVVSPAQILKSKSIPQTKSHLPGHALSLKN # SISSPDLRSNNRSKSLIPKGKDRWLSAETWCDALLFPRPRFRLKQDKDASASNHAGSGRIVSPPGSPVLGYFSNANAAKPSITSRVLAHSRSMVDLSK # PTVAEPSNLPRTEAHPPPDLLQIARPSEQSSPFRAPRPKSWA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g715 ### # start gene g716 Scaffold_1 AUGUSTUS gene 3560352 3561848 0.89 + . g716 Scaffold_1 AUGUSTUS transcript 3560352 3561848 0.89 + . g716.t1 Scaffold_1 AUGUSTUS start_codon 3560352 3560354 . + 0 transcript_id "g716.t1"; gene_id "g716"; Scaffold_1 AUGUSTUS CDS 3560352 3561848 0.89 + 0 transcript_id "g716.t1"; gene_id "g716"; Scaffold_1 AUGUSTUS stop_codon 3561846 3561848 . + 0 transcript_id "g716.t1"; gene_id "g716"; # protein sequence = [MVKNTANHLCAFDGEGVSPAEEKMAGLEGALQNNATKVITFADPAQMYIESPLPSRNGHSVSPTPSGISESRMGIALT # TPPMTEETFEPIRMPAHPYAQGGFSFLTPHIDFQSNARVDLPSAQVKPSHESRIQNPIPVPTSWHPYAQAGSSARDSYQSEMKITPRLRSDSDVPPPQ # KMWAQWSSGVVQEILPTELQYSPYLPDQKSMVEDDSQVRKQVRNSSPIYNTAGVGEALAFAAMHRYSRDSGIGTSEEHASAQAEYEAGSISSNRYRKT # TQYDVTRPLYLQKTVASSPLQAAIIPTPTPPLELMRQESSNSGGNHSSDSSPPMSPPPPLGNVDDLATFHDLFYRPNISRNVSNDGATPARINGIPWD # VASAGQRGSGLTSIARQLTEELSESRDSLKNSISFRSQSSLSALRQSLYEARTPPADANMRFVFSDLPETASLNTNGERKNLQANILTFEPSVQISED # VELSRASSPTRSPVDKDDDLGEYGVYNW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g716 ### # start gene g717 Scaffold_1 AUGUSTUS gene 3561880 3562422 0.8 + . g717 Scaffold_1 AUGUSTUS transcript 3561880 3562422 0.8 + . g717.t1 Scaffold_1 AUGUSTUS start_codon 3561880 3561882 . + 0 transcript_id "g717.t1"; gene_id "g717"; Scaffold_1 AUGUSTUS CDS 3561880 3562422 0.8 + 0 transcript_id "g717.t1"; gene_id "g717"; Scaffold_1 AUGUSTUS stop_codon 3562420 3562422 . + 0 transcript_id "g717.t1"; gene_id "g717"; # protein sequence = [MNSELVKSSRTSLPPVSGVSRVSLTGQMAFAIGDDALSEQHNNEDVPPSTAHLTTAHSSLQPPSAGLTRSSYMTTSDG # SRMSGLSDFPDPPLQRLTPAHMSLLSSYFDNTITEKEIADVRAYGHVKPATRSRSGSVLTSRPEAQGSRPPIDVPDKQEGVSFDGNEEIDNIIASLSP # SSHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g717 ### # start gene g718 Scaffold_1 AUGUSTUS gene 3564760 3565662 0.51 - . g718 Scaffold_1 AUGUSTUS transcript 3564760 3565662 0.51 - . g718.t1 Scaffold_1 AUGUSTUS stop_codon 3564760 3564762 . - 0 transcript_id "g718.t1"; gene_id "g718"; Scaffold_1 AUGUSTUS CDS 3564760 3565662 0.51 - 0 transcript_id "g718.t1"; gene_id "g718"; Scaffold_1 AUGUSTUS start_codon 3565660 3565662 . - 0 transcript_id "g718.t1"; gene_id "g718"; # protein sequence = [MLEQLKGLSDRIVGVTQADKGGSWMGSKLAKPSLDGIGGWLEGRFAKLVTGDMESPTATEHQREKTDERGFVGPFSQY # STISSTTTSTTPSPQSSVVNLNAYAPPPPRTGSALSTRSLAPPNGSTERASSTIDHSRQRLQPSAPRVTSANASTTTFSQAQSRSFGQATAAKYPTSP # NDLLTPRPALGTTEEDEGQEVTWWGSGNAATPTTASFVQLSGSALTPTVDGFISFMDNHDHSIGSTYQAKSDGSPIHNAEEEEEDLGFGNSKPKPKSA # SDDADKSGVAKTEEHKAAPARPGNFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g718 ### # start gene g719 Scaffold_1 AUGUSTUS gene 3566385 3567608 0.73 - . g719 Scaffold_1 AUGUSTUS transcript 3566385 3567608 0.73 - . g719.t1 Scaffold_1 AUGUSTUS stop_codon 3566385 3566387 . - 0 transcript_id "g719.t1"; gene_id "g719"; Scaffold_1 AUGUSTUS CDS 3566385 3566868 0.84 - 1 transcript_id "g719.t1"; gene_id "g719"; Scaffold_1 AUGUSTUS CDS 3566932 3567608 0.73 - 0 transcript_id "g719.t1"; gene_id "g719"; Scaffold_1 AUGUSTUS start_codon 3567606 3567608 . - 0 transcript_id "g719.t1"; gene_id "g719"; # protein sequence = [MSNGSILSTLSEDPYAPSKFQSGESYTSRYNYLDNDQASPNPGSASSGISSLGPPQDIKAPTYTPYAPSPSLLGTNDP # LGRAGARVPVFSFGFGGKFVTCFHGADKMNTGFDVALASRNSTGIEIRALNKIIPNSALNLSSVSFPGPLFSDPGSPTIGLVRPGAAAQAKTKKARVV # KYLEDRVEEFSQGLGYVPTGSEDQGRTESKLILFKILKVLVENDGKLSGTPSMDAAVRAALVPQTGADPNGAESSNFTSVADLQGADGTLMGLSNTSS # PGETPISITTLRPSALNKIERFLLHGERRQAYHYALDQKLWSHAMIIASGIDKEAWQEVVNEFLKTELGTQAPSMGPSNGRESLRVVYSLLSGQGAKA # GNVIPENTNFPKVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g719 ### # start gene g720 Scaffold_1 AUGUSTUS gene 3569123 3569539 0.97 - . g720 Scaffold_1 AUGUSTUS transcript 3569123 3569539 0.97 - . g720.t1 Scaffold_1 AUGUSTUS stop_codon 3569123 3569125 . - 0 transcript_id "g720.t1"; gene_id "g720"; Scaffold_1 AUGUSTUS CDS 3569123 3569539 0.97 - 0 transcript_id "g720.t1"; gene_id "g720"; Scaffold_1 AUGUSTUS start_codon 3569537 3569539 . - 0 transcript_id "g720.t1"; gene_id "g720"; # protein sequence = [MSGLEAAASLFGSEDAGSDPFASLGSDEQPSIAAHGANDDLFSVNDVSAAPDFLVSSQAYSGPAVSQDPVFQPAEQHS # SWPETNGYDPNLQSVPPTSEQSYGGYGAQSSYDEQWQSHSQPASYAPGTLLSYSQVADSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g720 ### # start gene g721 Scaffold_1 AUGUSTUS gene 3576524 3577555 0.35 - . g721 Scaffold_1 AUGUSTUS transcript 3576524 3577555 0.35 - . g721.t1 Scaffold_1 AUGUSTUS stop_codon 3576524 3576526 . - 0 transcript_id "g721.t1"; gene_id "g721"; Scaffold_1 AUGUSTUS CDS 3576524 3577206 0.41 - 2 transcript_id "g721.t1"; gene_id "g721"; Scaffold_1 AUGUSTUS CDS 3577324 3577555 0.71 - 0 transcript_id "g721.t1"; gene_id "g721"; Scaffold_1 AUGUSTUS start_codon 3577553 3577555 . - 0 transcript_id "g721.t1"; gene_id "g721"; # protein sequence = [MNAESSRSHSIFLITILQRNTESGAAKTGNLYLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDPKAR # NSRTTLIINCSPSSYNESETLSTLRFGIRAKSIKNSARVNAELSPAELKNLLTKAQSSNTGYQKYIAALEAELAIWRSGSQVEESEWATSAKAGAPAS # AAPSTAAAPKAPTSPTPSTTASSRSMTPINPAIEGLRSELGSRPQTPTVLGLEKDEREDFLRRENELSDALAEKESALVTADKLVKELKEELTFLKEQ # EATVNKVSASIRSNLFRTLLMYSLGKQVHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g721 ### # start gene g722 Scaffold_1 AUGUSTUS gene 3579376 3580568 0.55 + . g722 Scaffold_1 AUGUSTUS transcript 3579376 3580568 0.55 + . g722.t1 Scaffold_1 AUGUSTUS start_codon 3579376 3579378 . + 0 transcript_id "g722.t1"; gene_id "g722"; Scaffold_1 AUGUSTUS CDS 3579376 3579869 0.58 + 0 transcript_id "g722.t1"; gene_id "g722"; Scaffold_1 AUGUSTUS CDS 3580040 3580568 0.84 + 1 transcript_id "g722.t1"; gene_id "g722"; Scaffold_1 AUGUSTUS stop_codon 3580566 3580568 . + 0 transcript_id "g722.t1"; gene_id "g722"; # protein sequence = [MNTRRPPSRMRTNSSTSMPPPTLRPRSVMTKSASSSRSGEEQLEHGAAPAVHKQLKHTDDPDTNIQVIIRCRRRSDRE # IQENSPIIVNSKGAKSNQVSIETTAPVSTLGVVTLPPVRTYPFDLVYGPEADQAMIYHDVVGPMLQQVLEGYNCTLFAYGQTGTGKTVRVSFIELYNE # ELRDLLASELSAPIGSTQPMGMASKDATKNAGSNIKIFDDSNKRGVIIQGIEEVPVKSSADALALLTKGSERRQIAATKFNDHSSRSHSIFSLTVHTK # EAGVVGEDLLRIGKLNMVDLAGSENIGRSGAENKRAREAGMINQSLLTLGRVINALVDKAQHVPYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g722 ### # start gene g723 Scaffold_1 AUGUSTUS gene 3580602 3581273 0.96 + . g723 Scaffold_1 AUGUSTUS transcript 3580602 3581273 0.96 + . g723.t1 Scaffold_1 AUGUSTUS start_codon 3580602 3580604 . + 0 transcript_id "g723.t1"; gene_id "g723"; Scaffold_1 AUGUSTUS CDS 3580602 3581273 0.96 + 0 transcript_id "g723.t1"; gene_id "g723"; Scaffold_1 AUGUSTUS stop_codon 3581271 3581273 . + 0 transcript_id "g723.t1"; gene_id "g723"; # protein sequence = [MPCRESKLTRILQDSLGGRTKTSIIATISPARSNLEETLSTLDYAMSAKSIRNKPEINQRMTRNSLLKEYVAEIERLK # ADVLAAREKNGIFFSEETWAQMDTERELRETEIEEAKKQVEIIENQMRVVREEFEQSIGLLMKRDAELKDTKHRLDVTEVELSERKEELRGVKVALEE # ETVIRRAHQKTEITLDAVANGLRSVAKESVHDVSALFQKLGLFNSLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g723 ### # start gene g724 Scaffold_1 AUGUSTUS gene 3581474 3583197 0.5 + . g724 Scaffold_1 AUGUSTUS transcript 3581474 3583197 0.5 + . g724.t1 Scaffold_1 AUGUSTUS start_codon 3581474 3581476 . + 0 transcript_id "g724.t1"; gene_id "g724"; Scaffold_1 AUGUSTUS CDS 3581474 3582196 0.5 + 0 transcript_id "g724.t1"; gene_id "g724"; Scaffold_1 AUGUSTUS CDS 3582613 3583197 0.99 + 0 transcript_id "g724.t1"; gene_id "g724"; Scaffold_1 AUGUSTUS stop_codon 3583195 3583197 . + 0 transcript_id "g724.t1"; gene_id "g724"; # protein sequence = [MKTLENYSKRITEQLQYIKSNIQTIRAHDGAEDEAIASLEMMLNDTYETFNTGFASWSESLQKTCQQTHEELDHASSQ # TLSEAHMAVKSIHTTMEYVLQETAKYFESEQVVLTKASAIVQQSTDGEVERLREQNRTLMALVEKQKADANKAKEDLLQKVSGLLVNFVNEQDRGLRD # AAASIRDANIASENGMRSHHQQHRQVIDSLDQSRAPLIALSEKSRSDAKRMRDGSVKVQFITQFATSNLADVTSAYHTASTSQLTVVEKTTMALSDQG # TKEDIQTGSTPRKRSWRYVDEWDLTEDRKILLGTWRSHGMSGVGSETFLAEHLPLPAEDEDLPEEIETMDVDIEPMPSRSQSPSTSEQEVPIVNSLQS # SSASSTSSALPVRPTHTRQKSIPILKKASGKAPSLSPPLSIRATSTLLGGQEDEDDISSLYDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g724 ### # start gene g725 Scaffold_1 AUGUSTUS gene 3583566 3586282 0.37 + . g725 Scaffold_1 AUGUSTUS transcript 3583566 3586282 0.37 + . g725.t1 Scaffold_1 AUGUSTUS start_codon 3583566 3583568 . + 0 transcript_id "g725.t1"; gene_id "g725"; Scaffold_1 AUGUSTUS CDS 3583566 3584650 0.45 + 0 transcript_id "g725.t1"; gene_id "g725"; Scaffold_1 AUGUSTUS CDS 3584806 3586282 0.52 + 1 transcript_id "g725.t1"; gene_id "g725"; Scaffold_1 AUGUSTUS stop_codon 3586280 3586282 . + 0 transcript_id "g725.t1"; gene_id "g725"; # protein sequence = [MAAPLTGTIASSPMIGNNKPENDNTVHVTNEIPHTSLSSQHLYKASEFALLTVLQKQQIFNVLIQSPSISCNELRKLA # TLHVDLTTWDSQHQQKNKMKLLSDFAQHFCSNHCLIRQVQAETVGITHIPSISQSEFLECAKALKLRNYNETSAYKHKYEHKHFSQKKMKISHTSTLA # ANDVHFTSPVVDSEIWPEILSLNEKQAILQESYDAGSNASIRMIECSFCGTLETGMNICSIPCTDLDISLLDTAVHEIRLKTQQATIEAFRHETINND # CYQLCIQCKREVRYKTSIDNSEGHGKSQRSFVRLPLRSYANGTWTGDLPNALKGLTFLEEQCIARARATKCMFKLELGPSDNMLHEEISRIINALQWL # QLNNPLYYDLNLDAMLVNANQYPEHGIPIPLKSIIRTSSNSEGSSYSAQANSEQFNENVSSSGMLSSTVVDADHIDSTYQMRKLNALQQLKMATVHLS # NFHLALFLCLHTKTQKCMHIYGQLFPYGVGMMENDDVHCNSSVGFRHIDMRTHTAYLLQSRPNFRFQTHLSFIFVIGNILQRRQTSFNAKLAVKRSWF # PRVEMLLGKLSNDTILEFSEKLKKNPFVHPETEGEKAAKQLMKYINYIGENIPGSMSEVQNMREELFSLVHTNGLPHVFLTLNPSDTNNPIAQVLAGR # NIDLDQIFHDLKLHSENLERSTCIAQNPIAAAQFFDISVRNLLDILLGTKRQNKKGVFGEVAVYYGVVEAQGRGSLHIHLLIWLKHGLSPNEIKFKCE # SDPKWAQHLIDWYDDVFSQSIPNHTQEYIQTEGMYKRQPVMSRPMNPQISGYWYSFDQDLRNVLENAGMVHEHTDTCFKHLPIKLRSLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g725 ### # start gene g726 Scaffold_1 AUGUSTUS gene 3586740 3587723 0.9 + . g726 Scaffold_1 AUGUSTUS transcript 3586740 3587723 0.9 + . g726.t1 Scaffold_1 AUGUSTUS start_codon 3586740 3586742 . + 0 transcript_id "g726.t1"; gene_id "g726"; Scaffold_1 AUGUSTUS CDS 3586740 3587723 0.9 + 0 transcript_id "g726.t1"; gene_id "g726"; Scaffold_1 AUGUSTUS stop_codon 3587721 3587723 . + 0 transcript_id "g726.t1"; gene_id "g726"; # protein sequence = [MLREIAPEVFDTADLHNDEESDINCNGNNIEDPETLQQNLPPREEFDCDSFVLLTEKTLKTGKFSSKSYTHNSLFNDI # FFRPDVLFDICAWDLMCEYSKEELPESKKQIKTYLRFKLGHPQYTTHCLKKIDADNYQRVPVLKGYPIPRSDKIECQDKYMIAMLALFKPWSHNEQSP # LKAPQEAWNTAFNTWKDTDLFKSHIRIINNMQLLHESKDAKLDYSAQRQKRLAELSHKLALEEDDGESYLYDPEWENAMQVQVPATIDNDILQEVDNY # NVVSQEVLDVMEATVQRGFYKGELDSSSKKQLQNSYSNCTRVATLLDKVAVEC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g726 ### # start gene g727 Scaffold_1 AUGUSTUS gene 3587952 3588833 0.69 - . g727 Scaffold_1 AUGUSTUS transcript 3587952 3588833 0.69 - . g727.t1 Scaffold_1 AUGUSTUS stop_codon 3587952 3587954 . - 0 transcript_id "g727.t1"; gene_id "g727"; Scaffold_1 AUGUSTUS CDS 3587952 3588833 0.69 - 0 transcript_id "g727.t1"; gene_id "g727"; Scaffold_1 AUGUSTUS start_codon 3588831 3588833 . - 0 transcript_id "g727.t1"; gene_id "g727"; # protein sequence = [MENAKMADTPLPAGFQPEPTIGQSNSALRSKFQMVIGSLLYLMLGTRPDISFAVTKLAQHAANPSQEHLNKALYICRY # LLGTRSYALCYDGESGIGLSAWTDSDWASDPYTRRSQTGFFMKLANGIFSWTSHAQKTIAHSSTEAEYMALSDCSRQVVWIRNLLEELGYKLDAIPIA # GDNQGSIFMASNPVTSKHSKHIDIRYHYIREVVERGLVQVFFVDGSNNPADLFTKNLGRIKFELFRSMLGLEFYSSPILRLSVLSDAYRYCFEQSTLL # CCSARGCVERGYAVHMPLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g727 ### # start gene g728 Scaffold_1 AUGUSTUS gene 3589115 3591883 0.96 - . g728 Scaffold_1 AUGUSTUS transcript 3589115 3591883 0.96 - . g728.t1 Scaffold_1 AUGUSTUS stop_codon 3589115 3589117 . - 0 transcript_id "g728.t1"; gene_id "g728"; Scaffold_1 AUGUSTUS CDS 3589115 3591883 0.96 - 0 transcript_id "g728.t1"; gene_id "g728"; Scaffold_1 AUGUSTUS start_codon 3591881 3591883 . - 0 transcript_id "g728.t1"; gene_id "g728"; # protein sequence = [MSPVDDVENGSKAPTPPPPSPPMDFEVPGTASFDPDELMNFDLDREILAITGFMDTMGSVPSSDLDHMGYTNAPSSVA # VAKTCKSAFEPDLLSRLYNYRIDAKYISNEHFCVHDVSYSVCKKCKGKQRNQPKWWMNDSGCSEHTTFDLSDFIEYEDLEEKVLIATATTTAYITGVG # TVLINFKDVRGRMHSARIAPVFYMKELSHRLIAQGRFLQDGKTVRGNADKVDFWDKDGLFLSFEPRTHSDTIYILKDYSPQPMAVNLVIHSVDYTTMH # RRMGHPSREALTQLRKHAEGVPTFSIPHEEDLCEGCAKGKMTLRPFPPTNRRASRPFEIIHSDLKEWPTISYHKYKYTIFFIDDYTSHGFYCHLKKKS # GALPVIKQFIATVKNLYETNVKEWMSDGGGEFRSNALDEFFKNEGIKAQWSSPHIHQQNGRAERFIRTIIEKSEPQRFQACIPDSWWEFSVAHAVHVY # NRTPMRRHKWKTPYEILYNKVPRIDHLRVFGCGAYVYLHEEIRTNKQSPRSELMTYLGVSDGGHGNIYMRSNNAMFTATHAVFDEKLFPRCKSSERHR # STRLPDRNPDPKDPIPPPGDDDVPIFHQPTTPQMRQDPEQDVAPPVPAEQPARDPSPPPQPRNEQPPAQEQLRRSGRVRRPPTRLTGDPRSSTKLPTE # QQVERPKRDIQRRAPQPGSSSAEQERPEPEQVPGPSTEHPTPENGEQPSVTPGDEANTLIRLCREGGAELIYFLMAKAVPFEGELKSSENVREWTYKD # ITRLPKAEREEWLKACQEELEALKRRGTFELMDRPADRKVIKNRWVFDIKSDGRKKARLVVKGFSQIEGLDYDQVFSPVVRFETVRLLLALTALNNWY # LTGLDVRMPYLYGVLHETIYMEQPEGFRIKGKEDKVLLLRKALYGLKQAGLVWWQHWTHT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g728 ### # start gene g729 Scaffold_1 AUGUSTUS gene 3592208 3593017 0.58 - . g729 Scaffold_1 AUGUSTUS transcript 3592208 3593017 0.58 - . g729.t1 Scaffold_1 AUGUSTUS stop_codon 3592208 3592210 . - 0 transcript_id "g729.t1"; gene_id "g729"; Scaffold_1 AUGUSTUS CDS 3592208 3593017 0.58 - 0 transcript_id "g729.t1"; gene_id "g729"; Scaffold_1 AUGUSTUS start_codon 3593015 3593017 . - 0 transcript_id "g729.t1"; gene_id "g729"; # protein sequence = [MSSALFTAVTTTLKGDNYDTWASEMEAFLQATGLESAITTDQPSEPSPLVAANAASVEAWKNYEVVFKAWKEIDTKAI # GNIRLRISPSIRILAKEYSDTAKKLWNYLAKTYNVKSLGAVFNDFAAAMAIKIPYKQNPLSSMMEIGMYFTRMDEAGIGLADHLEALILLSKLPSRYS # VVIQTMSQLETAELKKLTFAKVRIAVMNAFSGDTIGNSQPQNANKFSNVHRKGTIPSSPNSSMVTVVTSSRRDRMGTMTTRRSVSVAVEEQEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g729 ### # start gene g730 Scaffold_1 AUGUSTUS gene 3595938 3597193 0.68 - . g730 Scaffold_1 AUGUSTUS transcript 3595938 3597193 0.68 - . g730.t1 Scaffold_1 AUGUSTUS stop_codon 3595938 3595940 . - 0 transcript_id "g730.t1"; gene_id "g730"; Scaffold_1 AUGUSTUS CDS 3595938 3596534 0.7 - 0 transcript_id "g730.t1"; gene_id "g730"; Scaffold_1 AUGUSTUS CDS 3596864 3597193 1 - 0 transcript_id "g730.t1"; gene_id "g730"; Scaffold_1 AUGUSTUS start_codon 3597191 3597193 . - 0 transcript_id "g730.t1"; gene_id "g730"; # protein sequence = [MSKLSFSLNKPKTATAAVTATFKQPAAFSAFDDDEPVDAAPTASSSREGVSANKKLLAQNALTSKKLKKQMEEEKKVD # STVYEYDEVWDKMQMAKLQQKEVKEAESKERKGRGTGMAHFYRRLLEDSEQSHEATVAATQKPIIGPQGPMPNMTITKPPDLTPLSDLERARIARGEG # KDVELNDDNQIIDKRDLLSGGLNLSGTNTRNLKTRSANKPEPDSDNVQVHRAVGVAASRQEIKERRMREIELQMEEEQERARKEQEREEYEMAQRIIA # KRNNEEDVESARARYLERKRRRLEEAQDAGEQKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g730 ### # start gene g731 Scaffold_1 AUGUSTUS gene 3598409 3599305 0.41 + . g731 Scaffold_1 AUGUSTUS transcript 3598409 3599305 0.41 + . g731.t1 Scaffold_1 AUGUSTUS start_codon 3598409 3598411 . + 0 transcript_id "g731.t1"; gene_id "g731"; Scaffold_1 AUGUSTUS CDS 3598409 3598437 0.41 + 0 transcript_id "g731.t1"; gene_id "g731"; Scaffold_1 AUGUSTUS CDS 3598519 3599305 0.69 + 1 transcript_id "g731.t1"; gene_id "g731"; Scaffold_1 AUGUSTUS stop_codon 3599303 3599305 . + 0 transcript_id "g731.t1"; gene_id "g731"; # protein sequence = [MATIPILDACVGREPWSDIADKLTQATTLYFKVPPSEVENYQYLSYLYCCCVLRHTSLLFAIWSAKGWGPLAFTTMLQ # PGPTPYLPPTLSHSESTTWANLERLSSMSGIPRTTISSLLAQVHGPWLLHLGPRERVSVLEAIASTYSCLGYRRKESYILREVLGCILDLIVCGREED # AHTNMRLFGNKGNVGIRLNESSDGNESILKLLKHVCKVLGVNLDAIQILDDNNDPKNHPEADDDSDVYREPFGWPELQIGVVRESVAVAEALPGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g731 ### # start gene g732 Scaffold_1 AUGUSTUS gene 3606924 3607226 0.6 - . g732 Scaffold_1 AUGUSTUS transcript 3606924 3607226 0.6 - . g732.t1 Scaffold_1 AUGUSTUS stop_codon 3606924 3606926 . - 0 transcript_id "g732.t1"; gene_id "g732"; Scaffold_1 AUGUSTUS CDS 3606924 3607226 0.6 - 0 transcript_id "g732.t1"; gene_id "g732"; Scaffold_1 AUGUSTUS start_codon 3607224 3607226 . - 0 transcript_id "g732.t1"; gene_id "g732"; # protein sequence = [MNILPFAIDDMYLAQYMLFKTINEEVDDLHVAKQEKGAGRFVRVAWPEGLQPPKDLQDADGICDWLDQRKVVEMEWEK # LKGYMERARGLELAAKRGDDAD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g732 ### # start gene g733 Scaffold_1 AUGUSTUS gene 3607620 3608012 0.63 - . g733 Scaffold_1 AUGUSTUS transcript 3607620 3608012 0.63 - . g733.t1 Scaffold_1 AUGUSTUS stop_codon 3607620 3607622 . - 0 transcript_id "g733.t1"; gene_id "g733"; Scaffold_1 AUGUSTUS CDS 3607620 3608012 0.63 - 0 transcript_id "g733.t1"; gene_id "g733"; Scaffold_1 AUGUSTUS start_codon 3608010 3608012 . - 0 transcript_id "g733.t1"; gene_id "g733"; # protein sequence = [MESDDDDEDEEEMEEEEEAPFKAARPDSDKNSLFDGSESDGSESFIVEDDGAGLAALPVEFSMESHQDLSHNFKKIFQ # FFVHIAVHPPIERHEFMEMQMKSQSRSAISHFLNSSILLRLHKMRCTSLSLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g733 ### # start gene g734 Scaffold_1 AUGUSTUS gene 3608378 3608770 0.59 - . g734 Scaffold_1 AUGUSTUS transcript 3608378 3608770 0.59 - . g734.t1 Scaffold_1 AUGUSTUS stop_codon 3608378 3608380 . - 0 transcript_id "g734.t1"; gene_id "g734"; Scaffold_1 AUGUSTUS CDS 3608378 3608770 0.59 - 0 transcript_id "g734.t1"; gene_id "g734"; Scaffold_1 AUGUSTUS start_codon 3608768 3608770 . - 0 transcript_id "g734.t1"; gene_id "g734"; # protein sequence = [MPRQRKSRETSKKLKQTTLTGSIQSPSRGRSKPSPSQPVAKRRRIDYLSDEQNEPSDDSDIGAFKLEPKGPVEDDDEL # TPPPAKRKRMSFVVGSDTEEIRRRCPYCEARNTKCEAEGKRQGEEEECACEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g734 ### # start gene g735 Scaffold_1 AUGUSTUS gene 3610979 3611872 0.91 + . g735 Scaffold_1 AUGUSTUS transcript 3610979 3611872 0.91 + . g735.t1 Scaffold_1 AUGUSTUS start_codon 3610979 3610981 . + 0 transcript_id "g735.t1"; gene_id "g735"; Scaffold_1 AUGUSTUS CDS 3610979 3611872 0.91 + 0 transcript_id "g735.t1"; gene_id "g735"; Scaffold_1 AUGUSTUS stop_codon 3611870 3611872 . + 0 transcript_id "g735.t1"; gene_id "g735"; # protein sequence = [MIPPSALVQSCVDFYQTLFSLTEQNIKNGGYEDVSIIYSSLSTQLQIINNGLELGSIVLGEGNSSRSQTQEVPVFRLH # DLLAWCEHYLSSETLPVSPVISEYLEENHVFRRNLNMMFEWSNLVYIASAIKTTFTPRGPLPLTSEMLSVSALQESSLDPEENNSPFEVVSLAHMRDV # LGYEFNVHLDAAAKLLLSHMHHVGLFDRIDLEPKLFLSEAQDTYCSFPLPIGLDESPDVEALFASVEACLSDLDLSVNEVGLLLLCRRLWPSGMASDY # ALTRLTRSIISWVLSEASFILCP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g735 ### # start gene g736 Scaffold_1 AUGUSTUS gene 3618164 3619069 0.76 - . g736 Scaffold_1 AUGUSTUS transcript 3618164 3619069 0.76 - . g736.t1 Scaffold_1 AUGUSTUS stop_codon 3618164 3618166 . - 0 transcript_id "g736.t1"; gene_id "g736"; Scaffold_1 AUGUSTUS CDS 3618164 3619069 0.76 - 0 transcript_id "g736.t1"; gene_id "g736"; Scaffold_1 AUGUSTUS start_codon 3619067 3619069 . - 0 transcript_id "g736.t1"; gene_id "g736"; # protein sequence = [MIPSPGLDVDIFVTNFKPLLAKNVPPPPNDSDLGLLAPTPTYARSKRISSEESTFYDSDGADDNFVDFNYYTDAFGDE # ENDISSIPLSEREDYTLNLTNFEGDNDDSLPGERQLNRKVQKQGKKLRAKSRKLSQILNLTQDGDRGVMLNGMNNPNNQVHGHGHGHSSGLDSDPNAL # AFLRDSNESDDESVDLGMRSVALYSSTEYPPRLIGPGSPNSSRSSSPLPFVPEDASTSTLTFPDRSSSAFHLSHDSRATSPPISQEQTAILIISLVKP # AKFTAPPISACTHQVLSPRQPTSTQYI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g736 ### # start gene g737 Scaffold_1 AUGUSTUS gene 3625135 3625584 0.55 + . g737 Scaffold_1 AUGUSTUS transcript 3625135 3625584 0.55 + . g737.t1 Scaffold_1 AUGUSTUS start_codon 3625135 3625137 . + 0 transcript_id "g737.t1"; gene_id "g737"; Scaffold_1 AUGUSTUS CDS 3625135 3625399 0.58 + 0 transcript_id "g737.t1"; gene_id "g737"; Scaffold_1 AUGUSTUS CDS 3625478 3625584 0.95 + 2 transcript_id "g737.t1"; gene_id "g737"; Scaffold_1 AUGUSTUS stop_codon 3625582 3625584 . + 0 transcript_id "g737.t1"; gene_id "g737"; # protein sequence = [MSSSSTTTSPPFPVPDGFKLHTENNAHILMSENEAFLNPVQEFNRDLSVACIRTWSEELNKAKDAKRAQARQKRASRA # KEELAKKRQREPESLQPSESTSEIPQAGSKEDVQVESSAKPEANL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g737 ### # start gene g738 Scaffold_1 AUGUSTUS gene 3628125 3628613 0.69 - . g738 Scaffold_1 AUGUSTUS transcript 3628125 3628613 0.69 - . g738.t1 Scaffold_1 AUGUSTUS stop_codon 3628125 3628127 . - 0 transcript_id "g738.t1"; gene_id "g738"; Scaffold_1 AUGUSTUS CDS 3628125 3628613 0.69 - 0 transcript_id "g738.t1"; gene_id "g738"; Scaffold_1 AUGUSTUS start_codon 3628611 3628613 . - 0 transcript_id "g738.t1"; gene_id "g738"; # protein sequence = [MDASTGRLMAVKQVELPNGSAPNLERKQSMLTALEHEIELLQDLQHDNIVQISLFAPFFCLIAHHLISCLDSTLEDDC # LNIFLEYVPGGSVTALLRNYGAFEETLVSNFTRQISQGLSYLHERGIIHRDIKGANILVDNKGGVKISDFGISKKVDVRKSSTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g738 ### # start gene g739 Scaffold_1 AUGUSTUS gene 3634261 3635079 0.15 - . g739 Scaffold_1 AUGUSTUS transcript 3634261 3635079 0.15 - . g739.t1 Scaffold_1 AUGUSTUS stop_codon 3634261 3634263 . - 0 transcript_id "g739.t1"; gene_id "g739"; Scaffold_1 AUGUSTUS CDS 3634261 3634658 0.49 - 2 transcript_id "g739.t1"; gene_id "g739"; Scaffold_1 AUGUSTUS CDS 3634755 3635079 0.18 - 0 transcript_id "g739.t1"; gene_id "g739"; Scaffold_1 AUGUSTUS start_codon 3635077 3635079 . - 0 transcript_id "g739.t1"; gene_id "g739"; # protein sequence = [MLPAPKQKAPVPSAPERVLGGGNGPGLVFNTSRPATTAAALFTEDEESISGADEPTLEGLTSSSTSFAFRPPSVARGK # VNISLEEEKPRVTLKSRDPTSTMSADFFGLVPSSSFISSAPSASITVSSAPDIPTFSVPEPSVNDPYPGYYQLPSGEWKQHDLEYYEKFRKRWEKSYN # DHVRALEKGAVKGFEGYDRHEMADVDAAKEMERAKIEIKGAGGEEGRIKESWRGVGEAEDEYYG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g739 ### # start gene g740 Scaffold_1 AUGUSTUS gene 3639214 3640946 0.89 - . g740 Scaffold_1 AUGUSTUS transcript 3639214 3640946 0.89 - . g740.t1 Scaffold_1 AUGUSTUS stop_codon 3639214 3639216 . - 0 transcript_id "g740.t1"; gene_id "g740"; Scaffold_1 AUGUSTUS CDS 3639214 3640627 0.9 - 1 transcript_id "g740.t1"; gene_id "g740"; Scaffold_1 AUGUSTUS CDS 3640693 3640946 0.89 - 0 transcript_id "g740.t1"; gene_id "g740"; Scaffold_1 AUGUSTUS start_codon 3640944 3640946 . - 0 transcript_id "g740.t1"; gene_id "g740"; # protein sequence = [MVTQFRHTLLFTDWSQAALSTAAVVHADYGYSGYPRRVPQFLARGPFNDWGFDKGLANQMTQNSEGKWELEIMAQWPT # YVQLNGDFYYGDTDGDGVLDRLPPNTAAPNYLNMSAPPSPHLAWSLIVDDATMTWSLSPRGQSSVGATMYALLLSIPLVTGSLAVLIFMWSFYGIKYN # QYGVKVKSSNSNYFPIFSAFSNNRSNTDFKDGGAVSEKLFGHKHNNEIIGWPEDKNKRRKVLIATLEYEIIDWKLKVKIGGLGVMSSLMGKAMTDVDL # VWVVPKVKDLEYPPGEPAQPIEVIIFGEPYLIEVETHILDNITYVILDSPVFRAQTKADPYPARMDDLSSAIFYSTWNQAIAATVRRFPLIDIYHIND # YHGALAPIYLLPKVLPICLSLHNAEFQGLWPLRTKEEMKEVCSAFNISKEHCTKYVQFGNTFNLLHAAASFISTHQKSVGVAGVSDKYGKRSWARYPA # LWTLKHVDSLPNPDPTDIAALDEKPVDAHDVQIDQVSEAARPEMKRQAQVWAGIKQDPDSDLFVFVGRWSKQKGVDLIADVLPSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g740 ### # start gene g741 Scaffold_1 AUGUSTUS gene 3641157 3642221 0.62 - . g741 Scaffold_1 AUGUSTUS transcript 3641157 3642221 0.62 - . g741.t1 Scaffold_1 AUGUSTUS stop_codon 3641157 3641159 . - 0 transcript_id "g741.t1"; gene_id "g741"; Scaffold_1 AUGUSTUS CDS 3641157 3642221 0.62 - 0 transcript_id "g741.t1"; gene_id "g741"; Scaffold_1 AUGUSTUS start_codon 3642219 3642221 . - 0 transcript_id "g741.t1"; gene_id "g741"; # protein sequence = [MPGTQAWKRHGCYKLGSTQYFNMPLNKGALGCYDEWNGRDHFDPTTDSRRLFGQFNHLRSVYGSLQDGFNLVERGNWT # YYIERPGSNGSATEMGLWSISRSAISGVQTLGGTYQDQVWLLFTNENTTKTWSYDCKGDLWISSPYTSGTTVRNLFAPYETYTLEDSLSSYNNDNQSV # WYGCLSSVTMAPYGFKALVPANEWTAPPPALTAFNPGHDARILANPGDANATTVDISLEFNTEMDCNSVTNSISMNMSSFSGASTPSITNVNCGALTN # PATGNVPGVSQTQWVWNATLANFPDGILTLTVNNPSSSGGNGTGVSHNSYPFFLISYLCYTVDRSSHVEEGHIWKRHGLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g741 ### # start gene g742 Scaffold_1 AUGUSTUS gene 3642855 3643529 0.57 - . g742 Scaffold_1 AUGUSTUS transcript 3642855 3643529 0.57 - . g742.t1 Scaffold_1 AUGUSTUS stop_codon 3642855 3642857 . - 0 transcript_id "g742.t1"; gene_id "g742"; Scaffold_1 AUGUSTUS CDS 3642855 3643315 0.73 - 2 transcript_id "g742.t1"; gene_id "g742"; Scaffold_1 AUGUSTUS CDS 3643469 3643529 0.57 - 0 transcript_id "g742.t1"; gene_id "g742"; Scaffold_1 AUGUSTUS start_codon 3643527 3643529 . - 0 transcript_id "g742.t1"; gene_id "g742"; # protein sequence = [MADFTVGTMSDLIGFDGFVTLLNRHPVIKTFDLCHRLATHATTRVKLPNSGSTMVQLSPWTPTVVSDFDQYGDMEAFG # VHPDWQRQLSKFASVQDRLREWKPSVMDKLTAFSCLAITALDIDAIRIDKATQVTVDALATWASSTRNCANKLGKNNFFIPGEVTGGNTFGSLYM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g742 ### # start gene g743 Scaffold_1 AUGUSTUS gene 3651968 3653177 0.64 + . g743 Scaffold_1 AUGUSTUS transcript 3651968 3653177 0.64 + . g743.t1 Scaffold_1 AUGUSTUS start_codon 3651968 3651970 . + 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_1 AUGUSTUS CDS 3651968 3652135 0.81 + 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_1 AUGUSTUS CDS 3652316 3652486 0.82 + 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_1 AUGUSTUS CDS 3652848 3653177 0.96 + 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_1 AUGUSTUS stop_codon 3653175 3653177 . + 0 transcript_id "g743.t1"; gene_id "g743"; # protein sequence = [MFSQDEAYSAYMDKFFERNPTTSISWLHDLGKKRHREAAEALLIEAQQTVNLEVKHLLAFHDALDVVSVHKALLDEFT # AVVANMRGRRSLDTQVDTLIQEKASLLSEKPELTNLERDTKTTGIGDAELTQRFRETALYTTFLDILSQPDQDEPEGFETDPDVALVVPTIEEIASRW # PGIPQDQVERIHDDYTSECDKLGEFELEESYPRVRELAEYELSIRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g743 ### # start gene g744 Scaffold_1 AUGUSTUS gene 3655984 3656472 0.5 + . g744 Scaffold_1 AUGUSTUS transcript 3655984 3656472 0.5 + . g744.t1 Scaffold_1 AUGUSTUS start_codon 3655984 3655986 . + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_1 AUGUSTUS CDS 3655984 3656472 0.5 + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_1 AUGUSTUS stop_codon 3656470 3656472 . + 0 transcript_id "g744.t1"; gene_id "g744"; # protein sequence = [MPATFNLELVPGQHVALDTTVTSDELDMARMEDGTTVDGMFWGKLDIVHNGDDHRMEFSGTRLTNQQDYSPDFMFDSR # VMTKLAVAAKPTTAKCNLSLLTPETTYCDVTLMFSPYWKPGTIWPPAESLGDNKVKYFLRVHPGGALEHFDSEVVSTALYYEAM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g744 ### # start gene g745 Scaffold_1 AUGUSTUS gene 3659380 3659739 0.66 - . g745 Scaffold_1 AUGUSTUS transcript 3659380 3659739 0.66 - . g745.t1 Scaffold_1 AUGUSTUS stop_codon 3659380 3659382 . - 0 transcript_id "g745.t1"; gene_id "g745"; Scaffold_1 AUGUSTUS CDS 3659380 3659739 0.66 - 0 transcript_id "g745.t1"; gene_id "g745"; Scaffold_1 AUGUSTUS start_codon 3659737 3659739 . - 0 transcript_id "g745.t1"; gene_id "g745"; # protein sequence = [MNPPDPLTTHFDPVRLQEEATYANAIPLPSPPSSHPDFNLNITAVDIATVKAYLKRTAHSDSKGADSTTYSQLISIPN # DRLALLFGRAFSNSEFPASWLTSIIIAVPKPGKDPSNPNSY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g745 ### # start gene g746 Scaffold_1 AUGUSTUS gene 3661318 3661608 0.79 - . g746 Scaffold_1 AUGUSTUS transcript 3661318 3661608 0.79 - . g746.t1 Scaffold_1 AUGUSTUS stop_codon 3661318 3661320 . - 0 transcript_id "g746.t1"; gene_id "g746"; Scaffold_1 AUGUSTUS CDS 3661318 3661608 0.79 - 0 transcript_id "g746.t1"; gene_id "g746"; Scaffold_1 AUGUSTUS start_codon 3661606 3661608 . - 0 transcript_id "g746.t1"; gene_id "g746"; # protein sequence = [MVRSNPIHPDLCLASSNSSDGRTINEQRATASSRMEIEKEEKIERQKRAEAERMQIQSTQAGLDDDIDPNEVRPSAEG # RNSDSELGEAWEDWGESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g746 ### # start gene g747 Scaffold_1 AUGUSTUS gene 3667343 3667705 0.46 + . g747 Scaffold_1 AUGUSTUS transcript 3667343 3667705 0.46 + . g747.t1 Scaffold_1 AUGUSTUS start_codon 3667343 3667345 . + 0 transcript_id "g747.t1"; gene_id "g747"; Scaffold_1 AUGUSTUS CDS 3667343 3667705 0.46 + 0 transcript_id "g747.t1"; gene_id "g747"; Scaffold_1 AUGUSTUS stop_codon 3667703 3667705 . + 0 transcript_id "g747.t1"; gene_id "g747"; # protein sequence = [MPQAADQERLAKEAEERIETQEREWFAKKPRHEELDLITLTDEVSAKAASLSIALQNISQTPQAKRPADAEAFVFEED # AKDQAQVEQLREKLQALKVVARAKVTEIACTVLCFTLIVQRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g747 ### # start gene g748 Scaffold_1 AUGUSTUS gene 3673201 3674055 0.68 - . g748 Scaffold_1 AUGUSTUS transcript 3673201 3674055 0.68 - . g748.t1 Scaffold_1 AUGUSTUS stop_codon 3673201 3673203 . - 0 transcript_id "g748.t1"; gene_id "g748"; Scaffold_1 AUGUSTUS CDS 3673201 3674055 0.68 - 0 transcript_id "g748.t1"; gene_id "g748"; Scaffold_1 AUGUSTUS start_codon 3674053 3674055 . - 0 transcript_id "g748.t1"; gene_id "g748"; # protein sequence = [MSFQAHACTRYSFAYYACHPLKGLSQNKLSMWRDEAHGKAHPDTEDEGTEENADDGPTTDVNPEGGAASRRVSSLAPE # SDAAAYASSSPSPPTHPPSSTTPSNAGGDEFDDQDMEAIWKEMETEQANEARRATTTTSNVASRDGDVQSSTNANGAEGSFMDVDDDIEGWLAMEEAM # DGRSLTSTAAPTGLSFATAVNSNPSKNANGSVTLAVDDDEMWGISHETEAEDARKQAALKDHSAVGPHPKHLRKHRQYPLQNEASTICIAKSSRNQLC # IAAIRGNTRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g748 ### # start gene g749 Scaffold_1 AUGUSTUS gene 3674491 3674730 0.99 - . g749 Scaffold_1 AUGUSTUS transcript 3674491 3674730 0.99 - . g749.t1 Scaffold_1 AUGUSTUS stop_codon 3674491 3674493 . - 0 transcript_id "g749.t1"; gene_id "g749"; Scaffold_1 AUGUSTUS CDS 3674491 3674730 0.99 - 0 transcript_id "g749.t1"; gene_id "g749"; Scaffold_1 AUGUSTUS start_codon 3674728 3674730 . - 0 transcript_id "g749.t1"; gene_id "g749"; # protein sequence = [MDIFDDDNEVEIISRPSTSASTASFGSSSSSQPLFLPDHDDEDEFNNGPEKNLPQQQDINVDEIFDSVVGDDLNFDYV # P] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g749 ### # start gene g750 Scaffold_1 AUGUSTUS gene 3678518 3679384 0.85 + . g750 Scaffold_1 AUGUSTUS transcript 3678518 3679384 0.85 + . g750.t1 Scaffold_1 AUGUSTUS start_codon 3678518 3678520 . + 0 transcript_id "g750.t1"; gene_id "g750"; Scaffold_1 AUGUSTUS CDS 3678518 3679384 0.85 + 0 transcript_id "g750.t1"; gene_id "g750"; Scaffold_1 AUGUSTUS stop_codon 3679382 3679384 . + 0 transcript_id "g750.t1"; gene_id "g750"; # protein sequence = [MGEITSFYERKTLSRSDSSEIPTFGFLPFSRDNVFRIRNEGGSYNDQKIIAKKVFEAFNVSTSSSKVAEGESKYQPNS # QSHYNEEMMEEEIKLTLGILPSGASLLLLTFTQVKQLCSYWRYSLPLPNEALQSSVFESLSPIEFDDIDSLAAKLRSLAPKSRGDRRDTSRDNKGFCQ # SVDLQEGSKRGVFENVRLLRQLATKRIPPPPSTPGLGNTIHEPYAQFSVPQNLDKTLLPRIQVAAFAYTLWSVGMGNLDLLDVAWARAEGGMHDLRAS # RDGGGTSGLWLEFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g750 ### # start gene g751 Scaffold_1 AUGUSTUS gene 3680259 3681009 0.52 + . g751 Scaffold_1 AUGUSTUS transcript 3680259 3681009 0.52 + . g751.t1 Scaffold_1 AUGUSTUS start_codon 3680259 3680261 . + 0 transcript_id "g751.t1"; gene_id "g751"; Scaffold_1 AUGUSTUS CDS 3680259 3680643 0.52 + 0 transcript_id "g751.t1"; gene_id "g751"; Scaffold_1 AUGUSTUS CDS 3680777 3681009 0.76 + 2 transcript_id "g751.t1"; gene_id "g751"; Scaffold_1 AUGUSTUS stop_codon 3681007 3681009 . + 0 transcript_id "g751.t1"; gene_id "g751"; # protein sequence = [MGDRFDEDGYDTTSGEEDIIISESNERPIAKKEENGFRVKGEPRESAANTIKRGTRLLLAQSPNRNLPANPNRASKHP # SNHSFQSSKFMLLISRHFSTPPQALIPVRTVYREWQESSTWVEVEYHFTEYGRTINEQRATASSRMEIEKEEKIERQKRAEAERMQIQSTQAGLDDDI # DPNEVRPSAEGQNSDSELGEAWEDWGESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g751 ### # start gene g752 Scaffold_1 AUGUSTUS gene 3685758 3686293 0.58 - . g752 Scaffold_1 AUGUSTUS transcript 3685758 3686293 0.58 - . g752.t1 Scaffold_1 AUGUSTUS stop_codon 3685758 3685760 . - 0 transcript_id "g752.t1"; gene_id "g752"; Scaffold_1 AUGUSTUS CDS 3685758 3686014 0.87 - 2 transcript_id "g752.t1"; gene_id "g752"; Scaffold_1 AUGUSTUS CDS 3686185 3686293 0.58 - 0 transcript_id "g752.t1"; gene_id "g752"; Scaffold_1 AUGUSTUS start_codon 3686291 3686293 . - 0 transcript_id "g752.t1"; gene_id "g752"; # protein sequence = [MHALSIATFVLLSAAVTAPAVGYVVPRKETPSTYAVETLETARPSYCIPSTSASASASAAEATSTATTPADGDNGNDN # DDDDSDDCDDGDDDDSTSTSVVSTATLSSTSEAFSPTSSSAFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g752 ### # start gene g753 Scaffold_1 AUGUSTUS gene 3688976 3689665 0.49 + . g753 Scaffold_1 AUGUSTUS transcript 3688976 3689665 0.49 + . g753.t1 Scaffold_1 AUGUSTUS start_codon 3688976 3688978 . + 0 transcript_id "g753.t1"; gene_id "g753"; Scaffold_1 AUGUSTUS CDS 3688976 3689145 0.49 + 0 transcript_id "g753.t1"; gene_id "g753"; Scaffold_1 AUGUSTUS CDS 3689224 3689665 0.5 + 1 transcript_id "g753.t1"; gene_id "g753"; Scaffold_1 AUGUSTUS stop_codon 3689663 3689665 . + 0 transcript_id "g753.t1"; gene_id "g753"; # protein sequence = [MHIVGNDNNGNGTGGSSRLTVGQNLQNDNSCLNNNSPSSTAGTPAGGSYPTDTSGDSTNVGAIVGGVVGGVLGLLALL # LTFYFIRRRTRQNRKNNEKPVDLLQSDEGDERPNGPGEPPEYYRPDPFIVPDPTYDESSASASGRPLSASERPTSRSGTPDVASSSTGTKKTGAPRVL # RPVNIIQHDDAGPSESWWKERRGARDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g753 ### # start gene g754 Scaffold_1 AUGUSTUS gene 3690403 3692080 0.45 + . g754 Scaffold_1 AUGUSTUS transcript 3690403 3692080 0.45 + . g754.t1 Scaffold_1 AUGUSTUS start_codon 3690403 3690405 . + 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_1 AUGUSTUS CDS 3690403 3690650 1 + 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_1 AUGUSTUS CDS 3690698 3690731 0.45 + 1 transcript_id "g754.t1"; gene_id "g754"; Scaffold_1 AUGUSTUS CDS 3691094 3692080 1 + 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_1 AUGUSTUS stop_codon 3692078 3692080 . + 0 transcript_id "g754.t1"; gene_id "g754"; # protein sequence = [MSAPVVAETSAISTVEAAGVPAVAPPSGAAPMPAIAPAPAPTYAPQGSAASTPSASLYVGELDPTVTEAMLFEIFNMI # GPVASPVSVFAVTQSPALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAADGAIKAVNGMLLNDKKVYVGHHISRKVNKTTTQSISLMLITVM # QERQSKLDEMKAQFTNLYIKNLDPEVTEEEFEKLFEPYGKVTSAIVQKDEEGKSRGFGFVNYESHEDAQKAVDALHDTEQHGRKLFVSRAQKKAEREE # ELRKSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKTASKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLLSVA # KLGASNWRARSLSATKLECNRLLLPVYLEDISMDRCIILLVPDSLLKDVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g754 ### # start gene g755 Scaffold_1 AUGUSTUS gene 3692191 3692783 0.99 + . g755 Scaffold_1 AUGUSTUS transcript 3692191 3692783 0.99 + . g755.t1 Scaffold_1 AUGUSTUS start_codon 3692191 3692193 . + 0 transcript_id "g755.t1"; gene_id "g755"; Scaffold_1 AUGUSTUS CDS 3692191 3692576 1 + 0 transcript_id "g755.t1"; gene_id "g755"; Scaffold_1 AUGUSTUS CDS 3692633 3692783 0.99 + 1 transcript_id "g755.t1"; gene_id "g755"; Scaffold_1 AUGUSTUS stop_codon 3692781 3692783 . + 0 transcript_id "g755.t1"; gene_id "g755"; # protein sequence = [MPGYPGRGGPRPPAPRGPPSPTLQNAVPPRPNGGAPPNGASPNGAPRAPGPQVQSRPTGAPAPPAGRSPQGLQPQGQP # QGYKLNPQTRNAPGQAPVPEIPPFNTAVLANSSPMEQKQMLGEQIYMRIAGTQPELAGKITGMLLEMDNTELLQLLESQEAMNNKVQEALVVLQEYSK # DE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g755 ### # start gene g756 Scaffold_1 AUGUSTUS gene 3694652 3695030 0.42 + . g756 Scaffold_1 AUGUSTUS transcript 3694652 3695030 0.42 + . g756.t1 Scaffold_1 AUGUSTUS start_codon 3694652 3694654 . + 0 transcript_id "g756.t1"; gene_id "g756"; Scaffold_1 AUGUSTUS CDS 3694652 3694697 0.45 + 0 transcript_id "g756.t1"; gene_id "g756"; Scaffold_1 AUGUSTUS CDS 3694786 3695030 0.71 + 2 transcript_id "g756.t1"; gene_id "g756"; Scaffold_1 AUGUSTUS stop_codon 3695028 3695030 . + 0 transcript_id "g756.t1"; gene_id "g756"; # protein sequence = [MTAPQQLVWFITGGIISTALSRGDLVIATGRSQEKLDKLLEKHVKTDNLRVLQLDVTSSPDIVKDVVNQAVAFWGRID # VAVNNAGNGELGLIEETE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g756 ### # start gene g757 Scaffold_1 AUGUSTUS gene 3696158 3698039 0.73 - . g757 Scaffold_1 AUGUSTUS transcript 3696158 3698039 0.73 - . g757.t1 Scaffold_1 AUGUSTUS stop_codon 3696158 3696160 . - 0 transcript_id "g757.t1"; gene_id "g757"; Scaffold_1 AUGUSTUS CDS 3696158 3697784 0.96 - 1 transcript_id "g757.t1"; gene_id "g757"; Scaffold_1 AUGUSTUS CDS 3697876 3698039 0.75 - 0 transcript_id "g757.t1"; gene_id "g757"; Scaffold_1 AUGUSTUS start_codon 3698037 3698039 . - 0 transcript_id "g757.t1"; gene_id "g757"; # protein sequence = [MVQLAEPIITPAPWPTLLGRQYVQFRPRQTVSYVPWLQNQFVEYERDRPLIRIWVHWSSLSYKRRWKLKSKPKWIYVF # EVSTRQFHEEFFHRLTINGTSSSPTSSPDSTPPTSAPPSSTSPTSTSSSTTSSQSSTNPDSSSLSPSQSSSSTSSSDSDSSSPSQTSSSSTSSSQSNT # SISSSSTLTSTASSESSSSIQSSITFVTVVTTEPDGSVSTFVVPSSLSSQSPDSKSADTHTAIIAGSAVGGALFAILLAVLVSLFCWRRRKNRKLGFI # EALTRRSKEGKGAGGIGLLDGEFDDDEEYRDELAGVHMRERTTSAHSPQPSVGAGSMASLSGPTQNSQHANYPYNPAPTLYRARASDSGSMFHEEGVW # PPPNHGTQFVDPFVPARELSKDSELGSIVDQIMGTDISAHASSLPPGAAPAVVPGAVGVPNSSSHVRGASGSSVNSTTPKRSSPLSKMLSKPDPPRSI # LTRTQTDPNASFDAHNNSTMVSSPTSIHPRNWLERQPKTPSPRDPPLTLPPPLNLSGTGGSSAPPSAFANSASSLVSAYGAPHMTSPPTSAGTSKHNK # RVSWGELPTPSRPGSRTGSIAGGIGEAM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g757 ### # start gene g758 Scaffold_1 AUGUSTUS gene 3700946 3702312 0.48 + . g758 Scaffold_1 AUGUSTUS transcript 3700946 3702312 0.48 + . g758.t1 Scaffold_1 AUGUSTUS start_codon 3700946 3700948 . + 0 transcript_id "g758.t1"; gene_id "g758"; Scaffold_1 AUGUSTUS CDS 3700946 3701438 0.51 + 0 transcript_id "g758.t1"; gene_id "g758"; Scaffold_1 AUGUSTUS CDS 3701519 3702312 0.49 + 2 transcript_id "g758.t1"; gene_id "g758"; Scaffold_1 AUGUSTUS stop_codon 3702310 3702312 . + 0 transcript_id "g758.t1"; gene_id "g758"; # protein sequence = [MSLRTNPPRKADNRPTKPTAACAHREHIFDKDDIKDRYHDPDGNKYRVCKHQPCPNRYDKITTGYIPGFARLIDRKQE # DLILGRGAPPEQVASSSSQKPEGTPEAAPAPEPEYPVFPPPPSPVLDRPSSPISSLPRSSPPPPDPEDPDPGAEVSDPESDDDDDILELATRSIGFSN # HLTSNPKDDTEAWEAKKDDDGNLLNAIVGRLSDQIYRRYKNYENVFDLWKNLLSDFDSKSALTEAHLQQQLHSMHCHEPSKVNEHLDKLLEIRDSLEA # RKITIPEEMFNNTIIASIPNIFKPTINALVVVAARTSVPLTTRELVSTIRAEASGHTRGQSGKKESANYAGEIPTAAGVDLTEIVETSEASPGAEEMV # IEEEVKVDQTPTIPHATIAVEKGISLINAVHRSDNRPTRPKRVLKRRRKTNHLERQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g758 ### # start gene g759 Scaffold_1 AUGUSTUS gene 3702516 3703610 0.58 + . g759 Scaffold_1 AUGUSTUS transcript 3702516 3703610 0.58 + . g759.t1 Scaffold_1 AUGUSTUS start_codon 3702516 3702518 . + 0 transcript_id "g759.t1"; gene_id "g759"; Scaffold_1 AUGUSTUS CDS 3702516 3703610 0.58 + 0 transcript_id "g759.t1"; gene_id "g759"; Scaffold_1 AUGUSTUS stop_codon 3703608 3703610 . + 0 transcript_id "g759.t1"; gene_id "g759"; # protein sequence = [MTPLQDKLRNTRSVPTRIIQAANAETFTSNTAGNLQIDLPINEDGISKSLTLQNTLLCPNTPNTLVSLGKLDDAGYVM # VIKDGTLKIINRQGETIGIVPKTNGLYQIPSAEYAYAGKATRMVSLYEAHCIAGHQNYAYVKHMFKSNQVHGIKLDPKQMEEPECRTCMLAKAARSPI # SKIRTSPRAEKFGDVFHMDVWGPASVQTLNHYVYALTVIDEATSWLEEPLMKGKDEAFAQYVILQTGLQTQYGVTVKKLHSDRGGEFLSGEFTAYLER # LGTKRSLTVHDTPEHNGIAERSHRTLLNGVRSLMISSGLPKWLWGFMMGYTVYVWNRTPKKANGMISPWENDLAQSRHLQLPHLWKHGLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g759 ### # start gene g760 Scaffold_1 AUGUSTUS gene 3704410 3705098 0.46 + . g760 Scaffold_1 AUGUSTUS transcript 3704410 3705098 0.46 + . g760.t1 Scaffold_1 AUGUSTUS start_codon 3704410 3704412 . + 0 transcript_id "g760.t1"; gene_id "g760"; Scaffold_1 AUGUSTUS CDS 3704410 3704460 0.46 + 0 transcript_id "g760.t1"; gene_id "g760"; Scaffold_1 AUGUSTUS CDS 3704577 3705098 0.46 + 0 transcript_id "g760.t1"; gene_id "g760"; Scaffold_1 AUGUSTUS stop_codon 3705096 3705098 . + 0 transcript_id "g760.t1"; gene_id "g760"; # protein sequence = [MDLESRTESSGILQHHLRGTYDIVIPPDDANILTSKWVFRTKRDEQGKVTGHRARLVVRGFNQIPDVDYFPDETFTSV # TKLAAARAILSTGAEQNMFIHQMDVKSAYLYGKLDDNEQIYMKAPPGVDIEVKAGQVLKLKLALYGLKQAGRHWYMRFREIMTSVGLTRSNFDHAVFY # RTDPFVSYSSTSMI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g760 ### # start gene g761 Scaffold_1 AUGUSTUS gene 3706304 3706657 0.91 + . g761 Scaffold_1 AUGUSTUS transcript 3706304 3706657 0.91 + . g761.t1 Scaffold_1 AUGUSTUS start_codon 3706304 3706306 . + 0 transcript_id "g761.t1"; gene_id "g761"; Scaffold_1 AUGUSTUS CDS 3706304 3706657 0.91 + 0 transcript_id "g761.t1"; gene_id "g761"; Scaffold_1 AUGUSTUS stop_codon 3706655 3706657 . + 0 transcript_id "g761.t1"; gene_id "g761"; # protein sequence = [MSATSTERPSSSKAESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPQWNLGWDHHNGGIPPWVTPNLPVAPWEVSHTPLPGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g761 ### # start gene g762 Scaffold_1 AUGUSTUS gene 3708611 3709384 0.44 + . g762 Scaffold_1 AUGUSTUS transcript 3708611 3709384 0.44 + . g762.t1 Scaffold_1 AUGUSTUS start_codon 3708611 3708613 . + 0 transcript_id "g762.t1"; gene_id "g762"; Scaffold_1 AUGUSTUS CDS 3708611 3709384 0.44 + 0 transcript_id "g762.t1"; gene_id "g762"; Scaffold_1 AUGUSTUS stop_codon 3709382 3709384 . + 0 transcript_id "g762.t1"; gene_id "g762"; # protein sequence = [MREYTREGPSPVVPQPRSWQATESISFNRNTPTGAKDGNPQVEQAGQIPDTPSVDRRRIHEWGARVQRAELGEYGRPE # GGAYALENEGGGKGGFNPPPRVPPPHFSSQSRDRERPLSQGGQGQREQGGRSGGGAPPPPPPPPRDRVIVIRKVPTRGNRTNRVGMVKERGDRGELPT # GAPEVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDWSAWKTCVKIMYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g762 ### # start gene g763 Scaffold_1 AUGUSTUS gene 3715362 3716550 0.65 - . g763 Scaffold_1 AUGUSTUS transcript 3715362 3716550 0.65 - . g763.t1 Scaffold_1 AUGUSTUS stop_codon 3715362 3715364 . - 0 transcript_id "g763.t1"; gene_id "g763"; Scaffold_1 AUGUSTUS CDS 3715362 3716091 0.91 - 1 transcript_id "g763.t1"; gene_id "g763"; Scaffold_1 AUGUSTUS CDS 3716180 3716550 0.69 - 0 transcript_id "g763.t1"; gene_id "g763"; Scaffold_1 AUGUSTUS start_codon 3716548 3716550 . - 0 transcript_id "g763.t1"; gene_id "g763"; # protein sequence = [MEPILLRAVHSEVAARAADCSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYP # LSEKELVALKDFIDKQLATGAITPSSSPHGAPVLFVPKKDGKLPPLAKIYTKLDLAHAYHLVRITEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQ # RFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHQEHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQS # FLGFANFYRRFIYNYRYRCADDSAYPKGASWIWDSSCQEAFENLKTAFTSAPILAHWEPNRPLIVETDASDYAIVSCAGSKPQRSTPPFYSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g763 ### # start gene g764 Scaffold_1 AUGUSTUS gene 3717369 3718862 0.41 - . g764 Scaffold_1 AUGUSTUS transcript 3717369 3718862 0.41 - . g764.t1 Scaffold_1 AUGUSTUS stop_codon 3717369 3717371 . - 0 transcript_id "g764.t1"; gene_id "g764"; Scaffold_1 AUGUSTUS CDS 3717369 3717698 0.91 - 0 transcript_id "g764.t1"; gene_id "g764"; Scaffold_1 AUGUSTUS CDS 3718489 3718712 0.44 - 2 transcript_id "g764.t1"; gene_id "g764"; Scaffold_1 AUGUSTUS CDS 3718784 3718862 0.96 - 0 transcript_id "g764.t1"; gene_id "g764"; Scaffold_1 AUGUSTUS start_codon 3718860 3718862 . - 0 transcript_id "g764.t1"; gene_id "g764"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTPRPIARRTGKQPQRRAASESPRDPPPHFDLDAGDHDDQDPPVDPDDPGADNNND # DLGDDSGGLPRGEPGDPSGRLLVPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPTFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIA # DCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g764 ### # start gene g765 Scaffold_1 AUGUSTUS gene 3721842 3722543 0.7 + . g765 Scaffold_1 AUGUSTUS transcript 3721842 3722543 0.7 + . g765.t1 Scaffold_1 AUGUSTUS start_codon 3721842 3721844 . + 0 transcript_id "g765.t1"; gene_id "g765"; Scaffold_1 AUGUSTUS CDS 3721842 3722543 0.7 + 0 transcript_id "g765.t1"; gene_id "g765"; Scaffold_1 AUGUSTUS stop_codon 3722541 3722543 . + 0 transcript_id "g765.t1"; gene_id "g765"; # protein sequence = [MPTTVEDITYMCDKPYREAVGALQYLSVATRPDITYAVGILAKFLQNPGITHWNAVKRVYAYLKYTRDLWLTFGGTQA # EIKGYTDADGMSQEDRHAISGYVFMLNGGAVSWTSKRQDTISLSTTEAEYIALTHAAKEAIWFRNLLSELFGPITKPIILNANNQSAITLAKDDRFHA # RTKHIDIRYHFIRYVIEEGKIRLVYCPTEDMTADIFTKALPSLKAKHFAASMGLTKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g765 ### # start gene g766 Scaffold_1 AUGUSTUS gene 3729521 3730935 0.18 + . g766 Scaffold_1 AUGUSTUS transcript 3729521 3730935 0.18 + . g766.t1 Scaffold_1 AUGUSTUS start_codon 3729521 3729523 . + 0 transcript_id "g766.t1"; gene_id "g766"; Scaffold_1 AUGUSTUS CDS 3729521 3729685 0.33 + 0 transcript_id "g766.t1"; gene_id "g766"; Scaffold_1 AUGUSTUS CDS 3730323 3730464 0.41 + 0 transcript_id "g766.t1"; gene_id "g766"; Scaffold_1 AUGUSTUS CDS 3730538 3730935 0.9 + 2 transcript_id "g766.t1"; gene_id "g766"; Scaffold_1 AUGUSTUS stop_codon 3730933 3730935 . + 0 transcript_id "g766.t1"; gene_id "g766"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKAISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKSA # VNDVLLVSARFIATLTVMFLLTVCLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILK # SRQDSGSDSSASDASFATAQSIPTTGSEDTSSLLQRLLFQSLRPSNEPLLHSLVVLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g766 ### # start gene g767 Scaffold_1 AUGUSTUS gene 3731223 3731528 0.94 - . g767 Scaffold_1 AUGUSTUS transcript 3731223 3731528 0.94 - . g767.t1 Scaffold_1 AUGUSTUS stop_codon 3731223 3731225 . - 0 transcript_id "g767.t1"; gene_id "g767"; Scaffold_1 AUGUSTUS CDS 3731223 3731528 0.94 - 0 transcript_id "g767.t1"; gene_id "g767"; Scaffold_1 AUGUSTUS start_codon 3731526 3731528 . - 0 transcript_id "g767.t1"; gene_id "g767"; # protein sequence = [MVVIRRTKGGSYIIAEMDGTILKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIF # DAIPRLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g767 ### # start gene g768 Scaffold_1 AUGUSTUS gene 3736233 3736933 0.59 - . g768 Scaffold_1 AUGUSTUS transcript 3736233 3736933 0.59 - . g768.t1 Scaffold_1 AUGUSTUS stop_codon 3736233 3736235 . - 0 transcript_id "g768.t1"; gene_id "g768"; Scaffold_1 AUGUSTUS CDS 3736233 3736598 0.84 - 0 transcript_id "g768.t1"; gene_id "g768"; Scaffold_1 AUGUSTUS CDS 3736757 3736933 0.6 - 0 transcript_id "g768.t1"; gene_id "g768"; Scaffold_1 AUGUSTUS start_codon 3736931 3736933 . - 0 transcript_id "g768.t1"; gene_id "g768"; # protein sequence = [MDTNDVNKKRSLRKLSEAYVLASREHLKSQDEQAEEKIIDCYLNQKMIGINKYSVYGEMFGGELAINLNPQRPQNQCN # NENTSETIRDDNWNKPKNSQRTRKRMVRYEVLKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQPGLVNEPPTNKLEERIKLNQQDRSPI # NFNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g768 ### # start gene g769 Scaffold_1 AUGUSTUS gene 3737064 3737714 0.47 - . g769 Scaffold_1 AUGUSTUS transcript 3737064 3737714 0.47 - . g769.t1 Scaffold_1 AUGUSTUS stop_codon 3737064 3737066 . - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_1 AUGUSTUS CDS 3737064 3737714 0.47 - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_1 AUGUSTUS start_codon 3737712 3737714 . - 0 transcript_id "g769.t1"; gene_id "g769"; # protein sequence = [MFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDE # EIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSE # ITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g769 ### # start gene g770 Scaffold_1 AUGUSTUS gene 3738108 3738431 0.46 - . g770 Scaffold_1 AUGUSTUS transcript 3738108 3738431 0.46 - . g770.t1 Scaffold_1 AUGUSTUS stop_codon 3738108 3738110 . - 0 transcript_id "g770.t1"; gene_id "g770"; Scaffold_1 AUGUSTUS CDS 3738108 3738431 0.46 - 0 transcript_id "g770.t1"; gene_id "g770"; Scaffold_1 AUGUSTUS start_codon 3738429 3738431 . - 0 transcript_id "g770.t1"; gene_id "g770"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g770 ### # start gene g771 Scaffold_1 AUGUSTUS gene 3738461 3739105 0.43 - . g771 Scaffold_1 AUGUSTUS transcript 3738461 3739105 0.43 - . g771.t1 Scaffold_1 AUGUSTUS stop_codon 3738461 3738463 . - 0 transcript_id "g771.t1"; gene_id "g771"; Scaffold_1 AUGUSTUS CDS 3738461 3739105 0.43 - 0 transcript_id "g771.t1"; gene_id "g771"; Scaffold_1 AUGUSTUS start_codon 3739103 3739105 . - 0 transcript_id "g771.t1"; gene_id "g771"; # protein sequence = [MVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNG # TQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVN # LAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g771 ### # start gene g772 Scaffold_1 AUGUSTUS gene 3739193 3739852 0.96 - . g772 Scaffold_1 AUGUSTUS transcript 3739193 3739852 0.96 - . g772.t1 Scaffold_1 AUGUSTUS stop_codon 3739193 3739195 . - 0 transcript_id "g772.t1"; gene_id "g772"; Scaffold_1 AUGUSTUS CDS 3739193 3739852 0.96 - 0 transcript_id "g772.t1"; gene_id "g772"; Scaffold_1 AUGUSTUS start_codon 3739850 3739852 . - 0 transcript_id "g772.t1"; gene_id "g772"; # protein sequence = [MSSEASNPAEKPWENFEGGDSSELRAVQWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLV # HQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDN # YYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g772 ### # start gene g773 Scaffold_1 AUGUSTUS gene 3740084 3740794 0.65 + . g773 Scaffold_1 AUGUSTUS transcript 3740084 3740794 0.65 + . g773.t1 Scaffold_1 AUGUSTUS start_codon 3740084 3740086 . + 0 transcript_id "g773.t1"; gene_id "g773"; Scaffold_1 AUGUSTUS CDS 3740084 3740794 0.65 + 0 transcript_id "g773.t1"; gene_id "g773"; Scaffold_1 AUGUSTUS stop_codon 3740792 3740794 . + 0 transcript_id "g773.t1"; gene_id "g773"; # protein sequence = [MTDGSGTTASRKKAWEKVGLMGKMLQEMSWKDRTNELKEDIAEHITQKIDDEVLTFKTWVTTAKNETAEAAENGRKGN # RILKEVVGRLDFNMSNGETAVEGEEGEITGSPTGTVNLSYAQALQVRNVANHLQRPKHAAAIQASKRMDHRIVVKTGSTSDLALGEAELVAKGKPSSG # AGRGCGGRQVKVIAVYRRPKERVLYASCELRKRHGGLGREPGWRASARHGSRSNGTVELP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g773 ### # start gene g774 Scaffold_1 AUGUSTUS gene 3751473 3751877 0.72 - . g774 Scaffold_1 AUGUSTUS transcript 3751473 3751877 0.72 - . g774.t1 Scaffold_1 AUGUSTUS stop_codon 3751473 3751475 . - 0 transcript_id "g774.t1"; gene_id "g774"; Scaffold_1 AUGUSTUS CDS 3751473 3751877 0.72 - 0 transcript_id "g774.t1"; gene_id "g774"; Scaffold_1 AUGUSTUS start_codon 3751875 3751877 . - 0 transcript_id "g774.t1"; gene_id "g774"; # protein sequence = [MGRFAGPVTSKASSARREGKTSAGTGTCEDNAEAVRRNIAAPSAAVAPTTLSSGNAPPNPQLSKEDLMEILHSPPLAF # HDFENSIIIRQASPDTPAEHVELYERIVTPYNADAFELELTTHNILDRHPLLVNIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g774 ### # start gene g775 Scaffold_1 AUGUSTUS gene 3752134 3753027 0.82 - . g775 Scaffold_1 AUGUSTUS transcript 3752134 3753027 0.82 - . g775.t1 Scaffold_1 AUGUSTUS stop_codon 3752134 3752136 . - 0 transcript_id "g775.t1"; gene_id "g775"; Scaffold_1 AUGUSTUS CDS 3752134 3753027 0.82 - 0 transcript_id "g775.t1"; gene_id "g775"; Scaffold_1 AUGUSTUS start_codon 3753025 3753027 . - 0 transcript_id "g775.t1"; gene_id "g775"; # protein sequence = [MKGFQSYPSLSRENRVRKTHKTEEILALFKKMDIGLKLKLNFKIDKENRRRREKSLEYQLGNAAEDASDIASFVTIDT # KSLENVRKDQTIFERLKDFLTTDTLDFFRQRNEEEEGDRRSRTRGREEDAEEGARKKRKAGKVVLVPRSAGPCITTFDTLLFDTINAFPTFPLFLFTN # KNLDLINTHMPELKRAKISHLEGKPHVPDLKEMAKWVKEAGGIFRDEDLDFIQWSQAAKNFYQFECLRDEDLGKEAPRALFYVEHFAFFLNQQDSEDF # FAYWLKVEVKLQRNINQAICFRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g775 ### # start gene g776 Scaffold_1 AUGUSTUS gene 3754236 3755206 0.27 + . g776 Scaffold_1 AUGUSTUS transcript 3754236 3755206 0.27 + . g776.t1 Scaffold_1 AUGUSTUS start_codon 3754236 3754238 . + 0 transcript_id "g776.t1"; gene_id "g776"; Scaffold_1 AUGUSTUS CDS 3754236 3754529 0.27 + 0 transcript_id "g776.t1"; gene_id "g776"; Scaffold_1 AUGUSTUS CDS 3754634 3755206 0.95 + 0 transcript_id "g776.t1"; gene_id "g776"; Scaffold_1 AUGUSTUS stop_codon 3755204 3755206 . + 0 transcript_id "g776.t1"; gene_id "g776"; # protein sequence = [MSGSRTQTTTTITSAGPSWSKPTNPPPSEPVDDDDEVLEEKVRRMKARKAAAAAKKKAEEEAARKAAEEEGGSSAGVG # GAAEAATARSRRGSSPGGSSPIGGDPDDGGDGEDDDDDDDDRAPCEQCRSKKISCQMQAGKRSSIICKPCHDAKVQCSYSRRPSTVKQEGGGNPLGKR # IAILESQMAQLLADNRQLRDGQIKANTYHRHMTRKLEWLIMDANRRRNSPPELPEAGPSAPSKKRRRAADSDEEEEKEMEGEEVESEEEGEEENNEPA # PKKAQLEKGKERAE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g776 ### # start gene g777 Scaffold_1 AUGUSTUS gene 3755571 3756158 0.37 - . g777 Scaffold_1 AUGUSTUS transcript 3755571 3756158 0.37 - . g777.t1 Scaffold_1 AUGUSTUS stop_codon 3755571 3755573 . - 0 transcript_id "g777.t1"; gene_id "g777"; Scaffold_1 AUGUSTUS CDS 3755571 3756158 0.37 - 0 transcript_id "g777.t1"; gene_id "g777"; Scaffold_1 AUGUSTUS start_codon 3756156 3756158 . - 0 transcript_id "g777.t1"; gene_id "g777"; # protein sequence = [MKSDLARDFVVNLDELHAFLREEILLAQSRYKEQADRKRISHPEFPIGSKVFVLAKHIRSTHPTEKFSEKYLGPFKVI # SRPGTLSYKLKLPDYLRWIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLCYYIRWAGYEGTDDEFSWVAADEL # HADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g777 ### # start gene g778 Scaffold_1 AUGUSTUS gene 3758136 3759773 0.55 + . g778 Scaffold_1 AUGUSTUS transcript 3758136 3759773 0.55 + . g778.t1 Scaffold_1 AUGUSTUS start_codon 3758136 3758138 . + 0 transcript_id "g778.t1"; gene_id "g778"; Scaffold_1 AUGUSTUS CDS 3758136 3759773 0.55 + 0 transcript_id "g778.t1"; gene_id "g778"; Scaffold_1 AUGUSTUS stop_codon 3759771 3759773 . + 0 transcript_id "g778.t1"; gene_id "g778"; # protein sequence = [MSLMLSGEDYTIALPNKLIQLAASAKDGKPKADIWEKIGLIGKILQECSYKDRMRKFRDEIIEKIEEKFDDETCRLEG # RVKAMRKEVEDASNASTKLKDKVEGLVKEAEARGTTSWAGLVELEAGEVAGTNTAQLSYANAAQAKSVAQHIQQPRHNPAIRDAELKDRRIIIRSEAD # SDWKLTEKEIVVKANLALEKIWQDEGEGTEMKVIAATKLRGNGAFLLMRSVAEAEAMKIGERMMRFCDAWGSKAFLRPNYHELVVESLPVETLIESLF # ERSRIEDTNNLPNGSIAQIRWIKPIEKRRADQKYAHAILSMNDRVTANKLILNQVIVGGKVLRVRKNKPDPRRCAKCNLFGHIAEQCRAEHDSCARCA # GQHRTSICIATRDQMQCANCKVKGHGAASRECPFFLRKLKDKAQWEPERGYEFFVTPDPETWIRDDDPLKEDFDQSWRQEVKEKHDTWTTVRRGMGQG # RLAGGAPGQGGGIQKSQPIRGRTSRQRPLPPSAGPPQATLERFNFSRSRPPPSQSQPRGGDPTTQSSQMSTATSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g778 ### # start gene g779 Scaffold_1 AUGUSTUS gene 3759851 3762045 0.38 + . g779 Scaffold_1 AUGUSTUS transcript 3759851 3762045 0.38 + . g779.t1 Scaffold_1 AUGUSTUS start_codon 3759851 3759853 . + 0 transcript_id "g779.t1"; gene_id "g779"; Scaffold_1 AUGUSTUS CDS 3759851 3761162 0.38 + 0 transcript_id "g779.t1"; gene_id "g779"; Scaffold_1 AUGUSTUS CDS 3761234 3762045 0.38 + 2 transcript_id "g779.t1"; gene_id "g779"; Scaffold_1 AUGUSTUS stop_codon 3762043 3762045 . + 0 transcript_id "g779.t1"; gene_id "g779"; # protein sequence = [MHDDFLRGSATNTDIYAIQEPYIDSKGRTRALPHLQVVYPTGHIEHFGNLNRPKSRSVILISTRIPTGNWTQIDIDSP # DITAIQITTRIGTIRIFNIYNDCEHDDTLQALNNWMRSPAARLSANGPHHYIWLGDFNRHHPLWDEPRNHHLFTARNLDAAQSLISLTAQFGLYMALP # GSIPTLQAHNTGNYTRVDNLFCTDVLLNHIIVCDTVPSKRPILTDHFPIHTIFDIQLPTADERDRWNWAKVDWEDFAARLEEALGKLAPPREIETEET # FWTTLGNFDTAIQQVIKEVVPKAKPSPHQRRWWNSTLTEMKRKTGTLSAKSHKKRFNPEHPIHEEFRRMRQAYDVEIKKAKVEKWVEYLEYADTSSVW # EVGRLMENGYSDGGRTRVPGLKVNQPGNTECIVEDNVGKEYVFRNAFFSPPPNLPTSQRMRNTQTTTKPGTIPNDLFKATSELIVPHLGPIYRATFTL # GIYPDDWSSTETIILKKPGRPDYRDPNAWHPITLSNGHGRLMNGCVADEITKRAELLGLLPALQFGARPGRNTTDSIHLMVDRIKELWREGYLVAVLY # MDVKGAFPSVDLAMLQHELRMVGVPGEILDWIRRRYSGRKTQLSFDDYISQPFAVPGGEDQGDPFAAVGYILYAAGLLTTFRTLDKEEGFGFMDDVAA # MKWGRGVDQLHAEIGQMMNKANGPLEWAASQTANLASRSSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g779 ### # start gene g780 Scaffold_1 AUGUSTUS gene 3766872 3767535 0.22 - . g780 Scaffold_1 AUGUSTUS transcript 3766872 3767535 0.22 - . g780.t1 Scaffold_1 AUGUSTUS stop_codon 3766872 3766874 . - 0 transcript_id "g780.t1"; gene_id "g780"; Scaffold_1 AUGUSTUS CDS 3766872 3767335 0.67 - 2 transcript_id "g780.t1"; gene_id "g780"; Scaffold_1 AUGUSTUS CDS 3767460 3767535 0.22 - 0 transcript_id "g780.t1"; gene_id "g780"; Scaffold_1 AUGUSTUS start_codon 3767533 3767535 . - 0 transcript_id "g780.t1"; gene_id "g780"; # protein sequence = [MRLHDSRPSDSSESKSKVKEPEVFDAKEWFVPDILDPDLDSLPAWMSSFKALVKELQENFGVYDAQGEAEDSLGNLKM # KETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAEHIKDKMACLPEPATLADYHQRFFVLTTVIGNARKLESCHEAAEAGTNGAGSGVTKLGSEAE # RLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g780 ### # start gene g781 Scaffold_1 AUGUSTUS gene 3767945 3768635 0.67 - . g781 Scaffold_1 AUGUSTUS transcript 3767945 3768635 0.67 - . g781.t1 Scaffold_1 AUGUSTUS stop_codon 3767945 3767947 . - 0 transcript_id "g781.t1"; gene_id "g781"; Scaffold_1 AUGUSTUS CDS 3767945 3768381 0.67 - 2 transcript_id "g781.t1"; gene_id "g781"; Scaffold_1 AUGUSTUS CDS 3768611 3768635 1 - 0 transcript_id "g781.t1"; gene_id "g781"; Scaffold_1 AUGUSTUS start_codon 3768633 3768635 . - 0 transcript_id "g781.t1"; gene_id "g781"; # protein sequence = [MCSEKNNKKSPHDPPPHFDLDAGDHNDQNPPVNPDDPGADNDNDNDNDNLDDDSGGLPRGEPGEPGDPSGPRSPTSPE # IPNEQRAMLELLSGFKGSIETLGTVLAALGCCRDEAGSGRREVWIRLGATVAERRSTEQAQSTDGRNNDLEQSVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g781 ### # start gene g782 Scaffold_1 AUGUSTUS gene 3772477 3773865 0.69 + . g782 Scaffold_1 AUGUSTUS transcript 3772477 3773865 0.69 + . g782.t1 Scaffold_1 AUGUSTUS start_codon 3772477 3772479 . + 0 transcript_id "g782.t1"; gene_id "g782"; Scaffold_1 AUGUSTUS CDS 3772477 3773865 0.69 + 0 transcript_id "g782.t1"; gene_id "g782"; Scaffold_1 AUGUSTUS stop_codon 3773863 3773865 . + 0 transcript_id "g782.t1"; gene_id "g782"; # protein sequence = [MSNLSLIKILSSYSLPLILESLFSRVPPHNQEVEEQEEIVLDALYYCVPTPRALRLYFEPLMLEEQCSEPEQDTKQTP # LVQEVQPLESGQTALGTKQTPLNSQGPFNPAKNKYGQAVVDAIKCLNSLQELAKILEIRAEAGYASEISHQLLCIYRSEPDGSPSNRLVKIASDTAYM # DFASPWVGEELLRRHNEWQFSDLCQFYHKISQTSELGVAAGVLFERLFVKRIITPSRTNLRFGLYSALNTPPKRQTRKSAKISHTRFIGFTLARPSSK # SVLHWSNSEADEVDKLDLPDADDTKEDDGDTDDPNPSSIPQPRWNDTFSLNPYHMIQEVEPVLCTLHVPSKRNNPLFDALLLQEDIPSCVTLWVIQIT # SAKKHGGASAGYNDIQDIYNRSVEKYSDGNVRVGYMLLVPPKYHQVEWTFENIHLLPEISDLLTVTFISKFSKSINWELVYHTMKVRRFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g782 ### # start gene g783 Scaffold_1 AUGUSTUS gene 3774719 3775114 1 - . g783 Scaffold_1 AUGUSTUS transcript 3774719 3775114 1 - . g783.t1 Scaffold_1 AUGUSTUS stop_codon 3774719 3774721 . - 0 transcript_id "g783.t1"; gene_id "g783"; Scaffold_1 AUGUSTUS CDS 3774719 3775114 1 - 0 transcript_id "g783.t1"; gene_id "g783"; Scaffold_1 AUGUSTUS start_codon 3775112 3775114 . - 0 transcript_id "g783.t1"; gene_id "g783"; # protein sequence = [MKEVNQHSGINETSLTPPPPEPPIPASHSPSVTVAIDPLLVTQTQTDHSALPLEPSISSSSVDPSSSGVPSSSSSEAN # YDTITDFPHDYATYIVVMLAEIFTTNSRYAGNTIMSTIGMATSQGVAGKWLDK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g783 ### # start gene g784 Scaffold_1 AUGUSTUS gene 3781270 3781680 0.84 - . g784 Scaffold_1 AUGUSTUS transcript 3781270 3781680 0.84 - . g784.t1 Scaffold_1 AUGUSTUS stop_codon 3781270 3781272 . - 0 transcript_id "g784.t1"; gene_id "g784"; Scaffold_1 AUGUSTUS CDS 3781270 3781680 0.84 - 0 transcript_id "g784.t1"; gene_id "g784"; Scaffold_1 AUGUSTUS start_codon 3781678 3781680 . - 0 transcript_id "g784.t1"; gene_id "g784"; # protein sequence = [MLRYEDKGPQDTQTVDPPAFTGNTRIDSDTRSDVSFDPLFDDEPEDGHKPFVDGVTSQAVPIAKPSLSTIAPPKGAPP # LLDSQRYKTFSPDILMTAAIDGQIMLWDKRVNTIGQGVGRLWISEKTPPWCLSVCLSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g784 ### # start gene g785 Scaffold_1 AUGUSTUS gene 3782045 3782937 0.65 - . g785 Scaffold_1 AUGUSTUS transcript 3782045 3782937 0.65 - . g785.t1 Scaffold_1 AUGUSTUS stop_codon 3782045 3782047 . - 0 transcript_id "g785.t1"; gene_id "g785"; Scaffold_1 AUGUSTUS CDS 3782045 3782749 0.65 - 0 transcript_id "g785.t1"; gene_id "g785"; Scaffold_1 AUGUSTUS CDS 3782821 3782937 0.95 - 0 transcript_id "g785.t1"; gene_id "g785"; Scaffold_1 AUGUSTUS start_codon 3782935 3782937 . - 0 transcript_id "g785.t1"; gene_id "g785"; # protein sequence = [MAHSDSEDEQEPFEDVEEYNEEDPEDLDAAEEATEDGDDDSPSDDTEDGFEEAEDDDSEPAIDITGDLLSEAFAQVEA # SAAAENTGSSSRSPEPDEFDKQEQSKGMVSSPERPEYMRFNLYPYSYNKSRLPAPPPRLRNRPISPSGARKRALRLAKVPRGFVVEAVCAIPHPAPTN # ALAASSCMSHLLTGSEDGYIRDYDIFTALNSKNFLSAPQRQHTGVVEGLMKAGHHRFWWENNLSSNFSGVNEDRTLVPVHSLAMHSDALWVLAGTNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g785 ### # start gene g786 Scaffold_1 AUGUSTUS gene 3787103 3788011 0.79 - . g786 Scaffold_1 AUGUSTUS transcript 3787103 3788011 0.79 - . g786.t1 Scaffold_1 AUGUSTUS stop_codon 3787103 3787105 . - 0 transcript_id "g786.t1"; gene_id "g786"; Scaffold_1 AUGUSTUS CDS 3787103 3788011 0.79 - 0 transcript_id "g786.t1"; gene_id "g786"; Scaffold_1 AUGUSTUS start_codon 3788009 3788011 . - 0 transcript_id "g786.t1"; gene_id "g786"; # protein sequence = [MKVKHRIDDEQAPDPLDDTRIHPEDYELARKMATDALELDEEDIHDEHPSHVVGLIMQDRENDKKLSELNLDEFAVSL # FNANQELKRHTLNVIRDELLKPFSEQRSPFPPIDGWNVLTMLSGETQKTLRIGLIVSVLVFRTRPDSVHVRLDSGLEGIIKQEYLVDDTPGAEKPVKG # KTIQGVIIDVRIDHENDIYEVELSSRWSDVVENDTEFRRKQPDVYWNRAQHEKDLDILARKQRAEVTKTRRIIKHPNFHNFNTSQAEQYLDGQQRGDV # VIRPSSKGIDHLAVTWKVDDKLYQHIGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g786 ### # start gene g787 Scaffold_1 AUGUSTUS gene 3788366 3789106 0.96 - . g787 Scaffold_1 AUGUSTUS transcript 3788366 3789106 0.96 - . g787.t1 Scaffold_1 AUGUSTUS stop_codon 3788366 3788368 . - 0 transcript_id "g787.t1"; gene_id "g787"; Scaffold_1 AUGUSTUS CDS 3788366 3789106 0.96 - 0 transcript_id "g787.t1"; gene_id "g787"; Scaffold_1 AUGUSTUS start_codon 3789104 3789106 . - 0 transcript_id "g787.t1"; gene_id "g787"; # protein sequence = [MEQHLIPAAVKWTREFLREEEEDYVANRCGDQLRKVSHFAQCNRYLMIQCYKHKRIDVSPYYNPQNSPMKLGDTPSVL # AVSWGKGDPQKDAICVVFMDDGGRMREWIKIDNLVDTETRDEFVDIIRRRKPDVIIVGGFTTATAKLSQRVKEIVSGRSSYDPNSTFGDSFDIPVIYV # PDELARIYHHSPRSKVEFSSLPPNARYCVGLARYAQSPLNEYAAVGSDITALSFDDDDQHLVSQRIPHMP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g787 ### # start gene g788 Scaffold_1 AUGUSTUS gene 3789704 3791420 0.28 - . g788 Scaffold_1 AUGUSTUS transcript 3789704 3791420 0.28 - . g788.t1 Scaffold_1 AUGUSTUS stop_codon 3789704 3789706 . - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS CDS 3789704 3790468 0.95 - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS CDS 3790520 3790637 1 - 1 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS CDS 3790747 3790901 0.35 - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS CDS 3790984 3791114 0.48 - 2 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS CDS 3791162 3791420 0.78 - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_1 AUGUSTUS start_codon 3791418 3791420 . - 0 transcript_id "g788.t1"; gene_id "g788"; # protein sequence = [MASPVSAYPPEDDPMQGAAEEEEEEGESWTGEPDDSSEEEERKMRTKKGASEKDSSWMKTRMMRMTRKNGNDARDVRN # IIGEDVRFREEEEDLEEDDLDLLEENTGGTFKKSRLKRLVRRGASESPPDSIQIWDDQRDEFDDDADGDIDDFIEYDDEEEGGMPMDERAREERRKER # RRQQQDAWAEIHDVFGDGHEYDWALVADEEAEYEQETQKDMTLQNVFEPSEIREHLLTEDDNLIRARDTPERMQLTTSSLSEAASISLHQTIIAEDLN # KDGARWVTLRLSPEKQKEFFSANGAYQHLQGELVMAVTFALRAMFVEEYEVPFIWTHRRDYISHFDVNDTRSPRLELLSLPELWRIYALGQKYRSLVE # RRNALSASYRRLGVTDTYYTDEIFPAIDSVELVADTSEWLLMKYKDKKENVAAFRFHDDDEAEVEKKHKMPSRISAYELAKKSIVSRLADVQFLTLLS # SSVRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g788 ### # start gene g789 Scaffold_1 AUGUSTUS gene 3791558 3792061 0.71 + . g789 Scaffold_1 AUGUSTUS transcript 3791558 3792061 0.71 + . g789.t1 Scaffold_1 AUGUSTUS start_codon 3791558 3791560 . + 0 transcript_id "g789.t1"; gene_id "g789"; Scaffold_1 AUGUSTUS CDS 3791558 3792061 0.71 + 0 transcript_id "g789.t1"; gene_id "g789"; Scaffold_1 AUGUSTUS stop_codon 3792059 3792061 . + 0 transcript_id "g789.t1"; gene_id "g789"; # protein sequence = [MTSEGQHLQFLRLALDEAKKCTPTPTAFCVGCVIVSCLEAEPVVISAGYSRELPGNTHAEANALSKFRSLPWDQLSKF # NASAQSHADILASADVYTTMEPCSIRTSGLSPCAEALIDARVKRCFIGVGEPDDFVHCEGAQKLVDAGIDVIWLKGLEEESLNVARRGH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g789 ### # start gene g790 Scaffold_1 AUGUSTUS gene 3794861 3795870 0.66 - . g790 Scaffold_1 AUGUSTUS transcript 3794861 3795870 0.66 - . g790.t1 Scaffold_1 AUGUSTUS stop_codon 3794861 3794863 . - 0 transcript_id "g790.t1"; gene_id "g790"; Scaffold_1 AUGUSTUS CDS 3794861 3795470 0.87 - 1 transcript_id "g790.t1"; gene_id "g790"; Scaffold_1 AUGUSTUS CDS 3795659 3795870 0.7 - 0 transcript_id "g790.t1"; gene_id "g790"; Scaffold_1 AUGUSTUS start_codon 3795868 3795870 . - 0 transcript_id "g790.t1"; gene_id "g790"; # protein sequence = [MIYDDLPRNPDYLDESFGAAGGLRELREEDLNDFDDEEVIQPHPVMRISTVLFQDLEAKQSEYFDLKVFSSTIENEVK # EMRKRLAKIRQLVAKGQTQQFAGEETSALLFNSVYIGLKEDTDELDSNALIAAIDEELKEDIDTATESSWQSLPVPSQPKTSAPATRLNGKRLARAKS # PSIEFRISGLDADIAQYHPDDPLVSRVFATMKDLEILDHIKSSTWKKFLTALRSDSRGNVRETDSKMVKVELRTVRPVVNDPSEEARLKVGQTCILS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g790 ### # start gene g791 Scaffold_1 AUGUSTUS gene 3797235 3798250 0.21 - . g791 Scaffold_1 AUGUSTUS transcript 3797235 3798250 0.21 - . g791.t1 Scaffold_1 AUGUSTUS stop_codon 3797235 3797237 . - 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_1 AUGUSTUS CDS 3797235 3797855 0.88 - 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_1 AUGUSTUS CDS 3797999 3798250 0.23 - 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_1 AUGUSTUS start_codon 3798248 3798250 . - 0 transcript_id "g791.t1"; gene_id "g791"; # protein sequence = [MSALKSPGATQLETEMNGSGSDNDGDTPPATPRVNRYHNIPAEHEEERRSLEKLVLQDLDLDLDYRQIPTSKDFKHSG # AAKPVTPSRSGAVVVDIQDLALTNRQIPTSRRTASFESPSSTRRLKPAGNVILTSEFRRLVIASSSAGSPKASVVVSLGHLQNEEASDRSESQALLPR # FVLSQFSQALNSTTMITLSLPSLLVSMDKDSFDALQYWADDASQLVQKSSGYSDSDGDTEKPTSRDSSLIGSHYFAKSNTSSEVTSLASNPRELKTII # TVQVFVVESEDASASA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g791 ### # start gene g792 Scaffold_1 AUGUSTUS gene 3798406 3800241 0.29 - . g792 Scaffold_1 AUGUSTUS transcript 3798406 3800241 0.29 - . g792.t1 Scaffold_1 AUGUSTUS stop_codon 3798406 3798408 . - 0 transcript_id "g792.t1"; gene_id "g792"; Scaffold_1 AUGUSTUS CDS 3798406 3800241 0.29 - 0 transcript_id "g792.t1"; gene_id "g792"; Scaffold_1 AUGUSTUS start_codon 3800239 3800241 . - 0 transcript_id "g792.t1"; gene_id "g792"; # protein sequence = [MCVDYSMTLSFCTDCLTKAINSIVSQTGLPLELVDSSLASVTARIPWPNPLTSTLGFSLSSLHVTLRVIPVQESTNHA # DINLSESVASYAESFIQDELTPREEANLRKSFRYDPSASLHHEPDDENVPGGLNPFRDLSEEEELADMDPDGVSLFATLIERLLAKFEFDATDTKVTI # LHPQSSRLSLSIADINYRTEAPSNANITDGFECAGESRTVSISGITLSGCDLRPHSAVPLSPDRLSFEGTPSYSLTPRSPSPSSSSSSSSMDEQVQWA # MSQSLAFLPPRPGSPASSVASSIYQSAISGHASYAEHTGRIEESLSSPASASKHDLEHVKEADDEVFLSFGVDPIIIKLTTPSLRGRTPSQTVLEELH # ISMDIGIISCALRPWHVPSVVRLVDAIMPSRVSLTPKPSNASTSPFSLGTDKRLSLNVKAVVVLLLASSSNGASSSFSLGGYFSRPRVPPSLSEGYLR # LFLDNLSATASNVTMKSKAPQPDSGSGSQTSTLTFSLSLNEISVFASRLSSNNNEAEVLAFPLMITDPLLPSQHISEHKHPDPSSEFPILLDFDVMDW # TTEAACKHGMKPSAWRTKQNKTRRPIPLMLRLQGLIETVLSQC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g792 ### # start gene g793 Scaffold_1 AUGUSTUS gene 3804365 3804910 0.44 - . g793 Scaffold_1 AUGUSTUS transcript 3804365 3804910 0.44 - . g793.t1 Scaffold_1 AUGUSTUS stop_codon 3804365 3804367 . - 0 transcript_id "g793.t1"; gene_id "g793"; Scaffold_1 AUGUSTUS CDS 3804365 3804910 0.44 - 0 transcript_id "g793.t1"; gene_id "g793"; Scaffold_1 AUGUSTUS start_codon 3804908 3804910 . - 0 transcript_id "g793.t1"; gene_id "g793"; # protein sequence = [MASARPAPSEISRDLQDLQLHSEASPDLTEDDELTDSVSRSVDVDSVLETPAKVRNARYLPPPSPTPRPRRAARGRDG # HTLSSGRGDSAESGPSRIAGLRYPPTTLKPLREEQSSDLGQIILSVISDSMAALRTSRPTFTYEGIRRGDIVEQVLNRTPSISLSQVKYASSLAINIH # YMTNL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g793 ### # start gene g794 Scaffold_1 AUGUSTUS gene 3812554 3813507 0.58 + . g794 Scaffold_1 AUGUSTUS transcript 3812554 3813507 0.58 + . g794.t1 Scaffold_1 AUGUSTUS start_codon 3812554 3812556 . + 0 transcript_id "g794.t1"; gene_id "g794"; Scaffold_1 AUGUSTUS CDS 3812554 3813507 0.58 + 0 transcript_id "g794.t1"; gene_id "g794"; Scaffold_1 AUGUSTUS stop_codon 3813505 3813507 . + 0 transcript_id "g794.t1"; gene_id "g794"; # protein sequence = [MSIQKLPRPSSSNLASSSSSIPFLALSIVTAILSNRSTDDLTHSFLPSSTPLIEVAEVLHHVFTLLDRYVPGSFTLQL # GITVESYRARTLRTSSNIHDRERADVIWRTAHDMISVATCNAVFNDCTDGQEYQTGMDNHCRPISCNSLGQDLVWQMIDLSSWILGLVETIVKECILS # SDFADSTESTGSSGDDLFGSGVSNLSYKFPRDIHCMAITMLDSPIKDTNLRSLDYPVFMHLVHIQALRNLRIALGHVNRFRKYLIGLTPRTENSQLSK # EVLLDLVDYSGIDISGLDKIFQELENFVQKFDGMTTDLKPTFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g794 ### # start gene g795 Scaffold_1 AUGUSTUS gene 3814837 3815358 0.5 + . g795 Scaffold_1 AUGUSTUS transcript 3814837 3815358 0.5 + . g795.t1 Scaffold_1 AUGUSTUS start_codon 3814837 3814839 . + 0 transcript_id "g795.t1"; gene_id "g795"; Scaffold_1 AUGUSTUS CDS 3814837 3815358 0.5 + 0 transcript_id "g795.t1"; gene_id "g795"; Scaffold_1 AUGUSTUS stop_codon 3815356 3815358 . + 0 transcript_id "g795.t1"; gene_id "g795"; # protein sequence = [MDGKPLYEYARNGIPLPRPIEPRTVTVHSLELVEWKGSAHSFSWPEKALNEDQKKAMEAAIRGVDKTATIEDDPESTV # QDEKPIAFVIKMKVSGGTYVRSLVHDLAHALGSAGHVVTLTRSRQGRFVLNSTEDGDRTCIPWLVFEKALTDPGAADEDGWTEWEREVLQHMEVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g795 ### # start gene g796 Scaffold_1 AUGUSTUS gene 3815801 3816313 0.73 + . g796 Scaffold_1 AUGUSTUS transcript 3815801 3816313 0.73 + . g796.t1 Scaffold_1 AUGUSTUS start_codon 3815801 3815803 . + 0 transcript_id "g796.t1"; gene_id "g796"; Scaffold_1 AUGUSTUS CDS 3815801 3816313 0.73 + 0 transcript_id "g796.t1"; gene_id "g796"; Scaffold_1 AUGUSTUS stop_codon 3816311 3816313 . + 0 transcript_id "g796.t1"; gene_id "g796"; # protein sequence = [MTANGFSNGQTSRLLKPGIYAPIPTFFLPESEDLGESNLQSYRKRIRLTSKIDLPSFEAHVTRVATAGVGPLIAGSMG # EAVHLLHSERVALIHAARKALDTAGLNHVPLIVGTGTGSTRETIELTKEAAEAGADYAIVIASGYFAGALAGNKEALKAFWTENQRKVRSPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g796 ### # start gene g797 Scaffold_1 AUGUSTUS gene 3824144 3825919 0.99 - . g797 Scaffold_1 AUGUSTUS transcript 3824144 3825919 0.99 - . g797.t1 Scaffold_1 AUGUSTUS stop_codon 3824144 3824146 . - 0 transcript_id "g797.t1"; gene_id "g797"; Scaffold_1 AUGUSTUS CDS 3824144 3825919 0.99 - 0 transcript_id "g797.t1"; gene_id "g797"; Scaffold_1 AUGUSTUS start_codon 3825917 3825919 . - 0 transcript_id "g797.t1"; gene_id "g797"; # protein sequence = [MPNLHRIRPYQRVVDNEIKTNTGSKDAPSKSNEKVFSGKYTDVPVPIPETGITTSNDLSALSNTVSVSRTTLSPFISV # TPVSLVIPTIFSSLRPTTLNLVSSAYPTTKVSLSTTLHSTVASISSPSPSTAVHPASAHKLPMTVVAILAVGSAFFLLGIFIVLKACTRPTRPTRPKP # SLPILDDAFADDDLYSPTKVDSPIFGGKERLSSQNESGAPTWTWTQYSENKPEAVPPLPYSQASDSDSRHGATPHTPNPISPGEMIGPSDFLFPRPPP # SQSVPTTLISNTSHFGIPGVLATAASRFSIARSVSVYPASPVTPAVDGRNYTADGHPIMKRSSKLGLRRSRSDMTEVTSRLSRDSLAYDGADLKSPQF # LAHSQSEAPTVPVGRTRIKSSYYTPGSYPRMSSLPSSTSTKTKADDIIEFNIQELPPIRTNSRKDRDTEALTSALGLASPLMETIALSPVQTLYPDDS # LSVVDVKRMPSHKHSKKPAIVDTSTALGSLMLVDFGTTVSGLAARLGDSIEFSSSKKVPLQTQHDMPPRVPSPPHLPSLAQMGLEHANPEAYAEYRSP # TYSIFGLYGEDRKSRLSMHSKTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g797 ### # start gene g798 Scaffold_1 AUGUSTUS gene 3826292 3828037 0.96 + . g798 Scaffold_1 AUGUSTUS transcript 3826292 3828037 0.96 + . g798.t1 Scaffold_1 AUGUSTUS start_codon 3826292 3826294 . + 0 transcript_id "g798.t1"; gene_id "g798"; Scaffold_1 AUGUSTUS CDS 3826292 3828037 0.96 + 0 transcript_id "g798.t1"; gene_id "g798"; Scaffold_1 AUGUSTUS stop_codon 3828035 3828037 . + 0 transcript_id "g798.t1"; gene_id "g798"; # protein sequence = [MTDSRIVRSETGESQTSQELAKLLANENPGTLAEESQVSEELSTKYEPSDPAQSEHYSPRQQYSLLGLGQGSPMSQTQ # HFSDDVEEGTHGSQKENHHSSTELESSKLEPNDPCSSNENAFTWSKNVRNVAMRPLFPFSSFTLKSPNAHPDPDEQSESLQRLSVSLERRDEPSVEAA # GNVPSPPYQLPGERPESEMICSDFGASSPERLDGIREALSNHHATPISQIVDSQSQNSDKASQFSEIGSQDDEPQAQVVPEYDMDVLRRMENELYPDS # QSQATQSTQPAASSDDNVVINDKDWANFTGIQVPPHRRHRYLASAKEGAAIAAVRNDTFYDGYDSSAPPLDDGFMRQFPAGMPDPGDSDQETQPATQP # VESSQQEGEWVPPVQFPAGHGSTSQEEGAATQIVEAQDVANQILDDSTVNSDEVKPGSVVHSVIPAPQPPVRTTFTRAKSPISALEIVPDSEPPVPSP # VKSTKRSSSVHAVTSPRQVFDTRAINQPVGTHPQPMEVDEVDEVEIPLAAVVKSGIKKVDNVKGCPSAVHMPPPPPKVGLSSLTRDLKLIFYTPSVQR # RPKRNVEIIKTKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g798 ### # start gene g799 Scaffold_1 AUGUSTUS gene 3828154 3829557 0.4 + . g799 Scaffold_1 AUGUSTUS transcript 3828154 3829557 0.4 + . g799.t1 Scaffold_1 AUGUSTUS start_codon 3828154 3828156 . + 0 transcript_id "g799.t1"; gene_id "g799"; Scaffold_1 AUGUSTUS CDS 3828154 3829242 0.43 + 0 transcript_id "g799.t1"; gene_id "g799"; Scaffold_1 AUGUSTUS CDS 3829303 3829557 0.78 + 0 transcript_id "g799.t1"; gene_id "g799"; Scaffold_1 AUGUSTUS stop_codon 3829555 3829557 . + 0 transcript_id "g799.t1"; gene_id "g799"; # protein sequence = [MPPARRSTRPTRNRRSLVESDSDGDIDDEIVLIKEEDDVVTVSGDGVDMTPSPSAAGESHRKRKRSVAISVPRKASKK # EHTQTPANHPRRHSTASVNGKNTIQVASLRVLVLYTDGYWYPGTVREFQTPDSYKILYDDNSAGWAKTGSMRQLELRVGDEVMDSKTKKSGTVSEVKE # DMIVVSGSGITFDLTYRYLRIPCDKVEAQWSDRELTIGVLAGIHDTSRQSALPEGADSFLRGCGIIITSNPNALQWNKEKNEILAAMIENGATLIEDW # SDALQTSGTYIYDKGKGKKGKGKDTGNRNPKSWKITKEQARWFEDPDEGSIRRVFVLADAVCQKPKYLIALALGVPCLSTNWMTDSLQNRDAKEWSSY # LLPKGIDNYTSQNVRLSQSVNLDWGMMPEHLTNIMDNPYAQKLFSGSSVLCVGDDYIPEQHEERMVSLLISFSMH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g799 ### # start gene g800 Scaffold_1 AUGUSTUS gene 3834192 3834682 0.96 + . g800 Scaffold_1 AUGUSTUS transcript 3834192 3834682 0.96 + . g800.t1 Scaffold_1 AUGUSTUS start_codon 3834192 3834194 . + 0 transcript_id "g800.t1"; gene_id "g800"; Scaffold_1 AUGUSTUS CDS 3834192 3834353 1 + 0 transcript_id "g800.t1"; gene_id "g800"; Scaffold_1 AUGUSTUS CDS 3834404 3834682 0.96 + 0 transcript_id "g800.t1"; gene_id "g800"; Scaffold_1 AUGUSTUS stop_codon 3834680 3834682 . + 0 transcript_id "g800.t1"; gene_id "g800"; # protein sequence = [MAATGGEGIGDEYEQKGKLKTIIVKSMHERKMKMAILAEGGFVALPGGYGTLEEIFEVTTWSQLGIHSKPVILLNVEG # YFNPLRTFIQDAVAAGYIRQQYAELITFVDAPSDCSQESFDWGLATLQSLSTWNSAKEGLFQWAGTKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g800 ### # start gene g801 Scaffold_1 AUGUSTUS gene 3844482 3845273 0.82 + . g801 Scaffold_1 AUGUSTUS transcript 3844482 3845273 0.82 + . g801.t1 Scaffold_1 AUGUSTUS start_codon 3844482 3844484 . + 0 transcript_id "g801.t1"; gene_id "g801"; Scaffold_1 AUGUSTUS CDS 3844482 3845273 0.82 + 0 transcript_id "g801.t1"; gene_id "g801"; Scaffold_1 AUGUSTUS stop_codon 3845271 3845273 . + 0 transcript_id "g801.t1"; gene_id "g801"; # protein sequence = [MNNKRLRTPSPTIPEEPSPKRARQLTDDGVETPSGRRTNRTLTSISPRRPVRKLQKEASVVPASEGEEEDEIEIVETA # IASEAPPRFRRRSADNIGQNSLEDNEAQSKPDPPVPAHRMRAANPLVHMLDDFGDMDGAIGVKARISGKGKADASGSSKPSTSNSVHRRKPGPGRSSE # GFGKNKSTSSLLTFDKGQLKTVKGKYVATEIVARREQDDAGDGTPDILNDSSQQPSFTCASSDKWRVSPTRLSRRGRCRGATSFRRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g801 ### # start gene g802 Scaffold_1 AUGUSTUS gene 3847352 3848293 0.92 - . g802 Scaffold_1 AUGUSTUS transcript 3847352 3848293 0.92 - . g802.t1 Scaffold_1 AUGUSTUS stop_codon 3847352 3847354 . - 0 transcript_id "g802.t1"; gene_id "g802"; Scaffold_1 AUGUSTUS CDS 3847352 3848293 0.92 - 0 transcript_id "g802.t1"; gene_id "g802"; Scaffold_1 AUGUSTUS start_codon 3848291 3848293 . - 0 transcript_id "g802.t1"; gene_id "g802"; # protein sequence = [MLKREIIVRPYGSLGTSAATIRVQNPCNHNILSLTDSLGRPRFGSPSSYRGTTSVFASPKKKQKRDLSTVDDSWQAAV # FEILRDKEDEDDGLPPIEFALSAASRYASVSASQSTVTAPKRDTKTTWKQKKRGNDIEVIDLDTQGDVESDWDPPEPDEMLDIPGELVLARDRADRRI # AHWPAKLLAYIPPSKPKKKTRQKEPKYRVLWLDDTEQEVPRDWFYACHEPEFGTCEVGQIVNAIDNDIDFFLGRWASLQVTTWIMEMMAMKTIQQTPR # EIAITIPRILVSFLPVPAPVQSHFLLYPVLSTIFPFAPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g802 ### # start gene g803 Scaffold_1 AUGUSTUS gene 3852434 3853288 0.98 + . g803 Scaffold_1 AUGUSTUS transcript 3852434 3853288 0.98 + . g803.t1 Scaffold_1 AUGUSTUS start_codon 3852434 3852436 . + 0 transcript_id "g803.t1"; gene_id "g803"; Scaffold_1 AUGUSTUS CDS 3852434 3853288 0.98 + 0 transcript_id "g803.t1"; gene_id "g803"; Scaffold_1 AUGUSTUS stop_codon 3853286 3853288 . + 0 transcript_id "g803.t1"; gene_id "g803"; # protein sequence = [MNSTKNTLIEFKYWQTPPTSMQRQKRRPTDSIDEPSSSSKRAPPYKKTRIVEPGEDPATFAEEVDSALENPSAHRKGR # VKNEGYDSDSSDDGEGVVYSRKKETENNDDDDMFAAAEKEEKAEETSTKKKKESYMRLGDIEGQEFGKSDSDEDDLEEEPEDEDDAERRKKAGMGYEL # SSFNMREEMEEGKFTEDGSYVRSFDPHGIHDRWMEGLDEKEIKLARKRKRQQEQIQKERIMAEEKELEESGGKPTLEKQLLPLLKKGETVLESLQRLG # VEVKKAKRRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g803 ### # start gene g804 Scaffold_1 AUGUSTUS gene 3853373 3853732 0.99 + . g804 Scaffold_1 AUGUSTUS transcript 3853373 3853732 0.99 + . g804.t1 Scaffold_1 AUGUSTUS start_codon 3853373 3853375 . + 0 transcript_id "g804.t1"; gene_id "g804"; Scaffold_1 AUGUSTUS CDS 3853373 3853732 0.99 + 0 transcript_id "g804.t1"; gene_id "g804"; Scaffold_1 AUGUSTUS stop_codon 3853730 3853732 . + 0 transcript_id "g804.t1"; gene_id "g804"; # protein sequence = [MNVEPVAKVPSDIEHITHLASTIMSLGDTDIYSKTYEELVRSVRSSGTVDANWVPPSANKKYEYKWDMPGASQSDQIF # GPFEEEEMQSWFKASYFGPSGEKVKVRHVGGEWMDWDELLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g804 ### # start gene g805 Scaffold_1 AUGUSTUS gene 3856479 3856988 0.97 - . g805 Scaffold_1 AUGUSTUS transcript 3856479 3856988 0.97 - . g805.t1 Scaffold_1 AUGUSTUS stop_codon 3856479 3856481 . - 0 transcript_id "g805.t1"; gene_id "g805"; Scaffold_1 AUGUSTUS CDS 3856479 3856988 0.97 - 0 transcript_id "g805.t1"; gene_id "g805"; Scaffold_1 AUGUSTUS start_codon 3856986 3856988 . - 0 transcript_id "g805.t1"; gene_id "g805"; # protein sequence = [MLRRAPTTADGKVVDRLQESTRINKPFRPPSFTINLERIQPQRKRKRVSYKDQQGEDSDSDDEGSKKKKKKKDDRDYM # NEDELLAAVKQYPVFKPKPFNQVRRFSMPSMRNKDGHDVILVPSNVSLGIRPQAKLIPRPLHDPMEDHAIVLYDPTIDDRETEEEKMERES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g805 ### # start gene g806 Scaffold_1 AUGUSTUS gene 3858782 3860288 0.77 + . g806 Scaffold_1 AUGUSTUS transcript 3858782 3860288 0.77 + . g806.t1 Scaffold_1 AUGUSTUS start_codon 3858782 3858784 . + 0 transcript_id "g806.t1"; gene_id "g806"; Scaffold_1 AUGUSTUS CDS 3858782 3860005 0.77 + 0 transcript_id "g806.t1"; gene_id "g806"; Scaffold_1 AUGUSTUS CDS 3860079 3860288 0.77 + 0 transcript_id "g806.t1"; gene_id "g806"; Scaffold_1 AUGUSTUS stop_codon 3860286 3860288 . + 0 transcript_id "g806.t1"; gene_id "g806"; # protein sequence = [MTESYISPSDVAQYHSSQDRVRNWITAHADHVFTSPNIPPSELDDQDALSSPPSDVESSHSIPPRLKLRYPDGRESPI # PHTTNSSSSTGRNSRSRSNPQPNSSRQRSKLATAPSSSPILISDPRREREKLRSHSPEEIQIFPSASDEIPPVPLSSHHSRSRSLPRDAFSPSRNHDP # MPNSSYGATPVMQMQTEMSPPVIPLLQSPGPYAGFARTQPAPAPWHPYTNAVRTGPMMPPSREHFKHNPPSIVYAPSNNSRTNYHPPAILSYRPTAGP # NRIFYSHSVPPAQAQIANAGYPSVHGSYAPQEERVHHHKRSSELRHSSSHHRDRSVGSAKSGKSSKSKDTTSRRHGRDRSRSLPLEQEYPPNPPSEHY # RHPHHHRPRPPSPTGSHGSGSTYYVLPTARQKVHVLRSPDTLYTATTTTQSPTTPISPTGSIKKPFLQRLLGGFAERFSSSGSSKGSLRRRHSTGTRP # PDPVSGH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g806 ### # start gene g807 Scaffold_1 AUGUSTUS gene 3861281 3862270 0.34 - . g807 Scaffold_1 AUGUSTUS transcript 3861281 3862270 0.34 - . g807.t1 Scaffold_1 AUGUSTUS stop_codon 3861281 3861283 . - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_1 AUGUSTUS CDS 3861281 3861706 0.99 - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_1 AUGUSTUS CDS 3861862 3862115 0.68 - 2 transcript_id "g807.t1"; gene_id "g807"; Scaffold_1 AUGUSTUS CDS 3862195 3862270 0.49 - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_1 AUGUSTUS start_codon 3862268 3862270 . - 0 transcript_id "g807.t1"; gene_id "g807"; # protein sequence = [MAPETAFEDTPERSPLMTALGYDKGTYNRPMLFSKVIFQECSPTHLLTTRSGFDWASLPQGSVIVDVGGGIGVSSISI # ARAFDHLKCIVQDRAMVLKLGTEVYPTLHIGCPQTSATVFLLKQITHDWSDRYVVQILQRLRDAATPTTTLVIVDTIIVHPCPSPPSDIPGANLVPPP # SPLLANLGVANASTHFADLSMFVHFNAQERTLVHMVELLAKTGWKVIRVYRSDDSGGYLPQIVATPVTIPASTKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g807 ### # start gene g808 Scaffold_1 AUGUSTUS gene 3864569 3865309 0.6 + . g808 Scaffold_1 AUGUSTUS transcript 3864569 3865309 0.6 + . g808.t1 Scaffold_1 AUGUSTUS start_codon 3864569 3864571 . + 0 transcript_id "g808.t1"; gene_id "g808"; Scaffold_1 AUGUSTUS CDS 3864569 3865309 0.6 + 0 transcript_id "g808.t1"; gene_id "g808"; Scaffold_1 AUGUSTUS stop_codon 3865307 3865309 . + 0 transcript_id "g808.t1"; gene_id "g808"; # protein sequence = [MLLNKYFPEVLSLSSSLRFEDTLVSSSKMDYLAPNSVYSSHLVLNLRIQAFIEACRTTPLAYPPDYTTSESPSSPPSF # KVPLDTIDQQTALLNNAQKLYAVVKMLPSEEDISRYMKELESVTGLLAYHVPEDSPVSEYLAQERREAVADQIDYGILCKSSLRVERLVMVYDFLAAD # HVKRPVISYLELYARYISTISDILNKLGVKPPPGMINPSTVAKTTSNSKGEVQEVSCGIDICGQANRKYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g808 ### # start gene g809 Scaffold_1 AUGUSTUS gene 3871265 3872280 0.16 + . g809 Scaffold_1 AUGUSTUS transcript 3871265 3872280 0.16 + . g809.t1 Scaffold_1 AUGUSTUS start_codon 3871265 3871267 . + 0 transcript_id "g809.t1"; gene_id "g809"; Scaffold_1 AUGUSTUS CDS 3871265 3871391 0.16 + 0 transcript_id "g809.t1"; gene_id "g809"; Scaffold_1 AUGUSTUS CDS 3871515 3871641 0.74 + 2 transcript_id "g809.t1"; gene_id "g809"; Scaffold_1 AUGUSTUS CDS 3871686 3872280 0.81 + 1 transcript_id "g809.t1"; gene_id "g809"; Scaffold_1 AUGUSTUS stop_codon 3872278 3872280 . + 0 transcript_id "g809.t1"; gene_id "g809"; # protein sequence = [MFRISERGRLTCVDLKQSGNDITSSFAATQFFPSRTNDIPAMQLFPSIVSIDTQEEKNSEAVYDLLEQLPSFWQQDTP # IEQVLTTVRYDILFRTGDEPGHTSRADFLTETVFNSTRGYRILLQDRLPVQSLMDGASWYSDIAPIMNHFDESTVGNIRSIAERFRSFDLSLSPDHPI # QASRRQNKAREQLALDLTLSKDIFSTQRFTQFPRTPTGDCTEASGPSATVHFHYLQPMPRRDHYSREEQQEDNVNFPFGVGLLLEDWDVGVDPDNTST # IRTTLSGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g809 ### # start gene g810 Scaffold_1 AUGUSTUS gene 3874809 3875517 0.25 - . g810 Scaffold_1 AUGUSTUS transcript 3874809 3875517 0.25 - . g810.t1 Scaffold_1 AUGUSTUS stop_codon 3874809 3874811 . - 0 transcript_id "g810.t1"; gene_id "g810"; Scaffold_1 AUGUSTUS CDS 3874809 3875090 0.67 - 0 transcript_id "g810.t1"; gene_id "g810"; Scaffold_1 AUGUSTUS CDS 3875221 3875517 0.36 - 0 transcript_id "g810.t1"; gene_id "g810"; Scaffold_1 AUGUSTUS start_codon 3875515 3875517 . - 0 transcript_id "g810.t1"; gene_id "g810"; # protein sequence = [MCKKIKKANCNVLLLQKSILRDAVDDTSLNFLKRLNILVVKDVERDEIEFLSKSLGCKPIADIEAFTEDKLGYADLVE # ETSADEVKVVKITGIKNRGRTAFSSFYRALIGGGGAPEIHVSRMLSQYAQSLKGMEAYCFQAYADALEVIPTTLAENAGLNPIAIVTELRNRHALGER # TAGINVRKVRINLVCY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g810 ### # start gene g811 Scaffold_1 AUGUSTUS gene 3877567 3878519 0.83 + . g811 Scaffold_1 AUGUSTUS transcript 3877567 3878519 0.83 + . g811.t1 Scaffold_1 AUGUSTUS start_codon 3877567 3877569 . + 0 transcript_id "g811.t1"; gene_id "g811"; Scaffold_1 AUGUSTUS CDS 3877567 3877931 0.96 + 0 transcript_id "g811.t1"; gene_id "g811"; Scaffold_1 AUGUSTUS CDS 3877984 3878140 0.85 + 1 transcript_id "g811.t1"; gene_id "g811"; Scaffold_1 AUGUSTUS CDS 3878190 3878519 1 + 0 transcript_id "g811.t1"; gene_id "g811"; Scaffold_1 AUGUSTUS stop_codon 3878517 3878519 . + 0 transcript_id "g811.t1"; gene_id "g811"; # protein sequence = [METSPGGGGIDILDTDLSVDFAAPVGYVEPEKPKAAPPPTMASKFKIDINSVSPGSSRPGSSLSGGFAGSIAGQNVVS # KDGDTWESFKGKGETLAGRKTKGKGISHRKVEQVAESSKIIRTDNRRIVSNDTLEDNSKVPAALNLPFGQLFFGYNITPYVPPATDDTPTSPTVTQGS # VAFSGSGRSLNGRSTGSQPPSTSAKGKAKASDESSPQSSASWSGAGRTLGSSAPRESGSVGAGGAPVPRPQQRNSEGQKGKKKQRSPSPEIDWGVDDD # DDVMIIDSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g811 ### # start gene g812 Scaffold_1 AUGUSTUS gene 3878676 3879116 1 + . g812 Scaffold_1 AUGUSTUS transcript 3878676 3879116 1 + . g812.t1 Scaffold_1 AUGUSTUS start_codon 3878676 3878678 . + 0 transcript_id "g812.t1"; gene_id "g812"; Scaffold_1 AUGUSTUS CDS 3878676 3879116 1 + 0 transcript_id "g812.t1"; gene_id "g812"; Scaffold_1 AUGUSTUS stop_codon 3879114 3879116 . + 0 transcript_id "g812.t1"; gene_id "g812"; # protein sequence = [MSVPTSKIEEIIDTTQDSDAQDDSDDNIAVENEHDDAEHQQGPSSSTASSSKKKKKRSKAAKALNALTGKSIPQALVD # QVLDTVKAEGGEGSEQANAENVRQVLEHMKIMEIVKGKAGLGGLNKKDMGEHKARRSYDFHRDYRSHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g812 ### # start gene g813 Scaffold_1 AUGUSTUS gene 3880962 3881329 0.92 + . g813 Scaffold_1 AUGUSTUS transcript 3880962 3881329 0.92 + . g813.t1 Scaffold_1 AUGUSTUS start_codon 3880962 3880964 . + 0 transcript_id "g813.t1"; gene_id "g813"; Scaffold_1 AUGUSTUS CDS 3880962 3881028 0.92 + 0 transcript_id "g813.t1"; gene_id "g813"; Scaffold_1 AUGUSTUS CDS 3881082 3881329 1 + 2 transcript_id "g813.t1"; gene_id "g813"; Scaffold_1 AUGUSTUS stop_codon 3881327 3881329 . + 0 transcript_id "g813.t1"; gene_id "g813"; # protein sequence = [MSGLKQQNSERTNQGIVDGRPEGQEPKHAPITLDTVVDKDASLSNAEHSSMAHTSASQTINGATSAEVNDSLGKPGSG # MSSKEKHHDGMPGRKKQEIGEMQWQK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g813 ### # start gene g814 Scaffold_1 AUGUSTUS gene 3882224 3882562 0.94 - . g814 Scaffold_1 AUGUSTUS transcript 3882224 3882562 0.94 - . g814.t1 Scaffold_1 AUGUSTUS stop_codon 3882224 3882226 . - 0 transcript_id "g814.t1"; gene_id "g814"; Scaffold_1 AUGUSTUS CDS 3882224 3882562 0.94 - 0 transcript_id "g814.t1"; gene_id "g814"; Scaffold_1 AUGUSTUS start_codon 3882560 3882562 . - 0 transcript_id "g814.t1"; gene_id "g814"; # protein sequence = [MKTQAPQFYTPPGRTGNIKSWILRMVFVVALASTLQLSTVYASPLPTNPGSGSGTPVHANSPAPESTGAPDHARLNKA # LDKWTMFATGSTLIGFAYAKPVSSLCLAIKEILI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g814 ### # start gene g815 Scaffold_1 AUGUSTUS gene 3888458 3889204 0.69 + . g815 Scaffold_1 AUGUSTUS transcript 3888458 3889204 0.69 + . g815.t1 Scaffold_1 AUGUSTUS start_codon 3888458 3888460 . + 0 transcript_id "g815.t1"; gene_id "g815"; Scaffold_1 AUGUSTUS CDS 3888458 3889204 0.69 + 0 transcript_id "g815.t1"; gene_id "g815"; Scaffold_1 AUGUSTUS stop_codon 3889202 3889204 . + 0 transcript_id "g815.t1"; gene_id "g815"; # protein sequence = [MSLGLPIQNSEGSPQGQHLLRGRSSHTAVAATSLSPDQATSAPPTPRGQINPTATSVVESNAYSRPRRPSAAERILES # VRNRDQNLTRSPASPRTAWIHYPPDPPSTSTVIPGITATASTPKENSNNLAQNLRMDSGLVVSRRQSLIPPVTATHVPPNSPNIPRLALNPAPRPQME # RSPSAPITRTYNAKSALAPVPLAYPTDLLELLDGEHHTDEVAVKFEAGWPLLEDWLRRVGEDHNGRVLVIYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g815 ### # start gene g816 Scaffold_1 AUGUSTUS gene 3891878 3892795 0.59 - . g816 Scaffold_1 AUGUSTUS transcript 3891878 3892795 0.59 - . g816.t1 Scaffold_1 AUGUSTUS stop_codon 3891878 3891880 . - 0 transcript_id "g816.t1"; gene_id "g816"; Scaffold_1 AUGUSTUS CDS 3891878 3892795 0.59 - 0 transcript_id "g816.t1"; gene_id "g816"; Scaffold_1 AUGUSTUS start_codon 3892793 3892795 . - 0 transcript_id "g816.t1"; gene_id "g816"; # protein sequence = [MLSQRSCPRLTHLWLPILGIEESKPAATIILLRAYAAAVEERFSTFATSQSGSFHYCKAVPLLKFLKHLFKFHSVFVE # SRPDNHLEGQPFEQAFKDYTVRFNHFVRAENSSVMTAEAASVMYLRCAAVMGSAHNKDFDIMIPAVYSKANNPLDSKKVTAIPVSLKRIPFSGKVITH # PIDERAIPFFRPFGTKSTAKRLSISLTIPYISLAMNLAASYSKPHNTQEKEKTRENGEQMKHGRGTSVLRRSRQESPSSDGVLDRPLGNTPATVSLLM # EYLSTAIWMLISPGHCCRSLISLLTIRANTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g816 ### # start gene g817 Scaffold_1 AUGUSTUS gene 3897538 3898125 0.85 - . g817 Scaffold_1 AUGUSTUS transcript 3897538 3898125 0.85 - . g817.t1 Scaffold_1 AUGUSTUS stop_codon 3897538 3897540 . - 0 transcript_id "g817.t1"; gene_id "g817"; Scaffold_1 AUGUSTUS CDS 3897538 3898125 0.85 - 0 transcript_id "g817.t1"; gene_id "g817"; Scaffold_1 AUGUSTUS start_codon 3898123 3898125 . - 0 transcript_id "g817.t1"; gene_id "g817"; # protein sequence = [MDIVLTAIDSPATSREIVDLCRQAKIPVNAADIPELCDFYLVLISAMAFADHDSSNGNGPRISALMKEKVQASLEGYE # GLALSKIGQLRAELKERVPEIGGPLGRKRMKWMSKICNEWPLIDFTLLDSAMIQKLLDEGWEKDRVPTFTEVCSKPRPLGVEDSSKGHRFGSNLLIPI # AHFVAGAALMAAVILARRQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g817 ### # start gene g818 Scaffold_1 AUGUSTUS gene 3902291 3903390 0.66 - . g818 Scaffold_1 AUGUSTUS transcript 3902291 3903390 0.66 - . g818.t1 Scaffold_1 AUGUSTUS stop_codon 3902291 3902293 . - 0 transcript_id "g818.t1"; gene_id "g818"; Scaffold_1 AUGUSTUS CDS 3902291 3902883 0.88 - 2 transcript_id "g818.t1"; gene_id "g818"; Scaffold_1 AUGUSTUS CDS 3903132 3903390 0.97 - 0 transcript_id "g818.t1"; gene_id "g818"; Scaffold_1 AUGUSTUS start_codon 3903388 3903390 . - 0 transcript_id "g818.t1"; gene_id "g818"; # protein sequence = [MSVTLEKIAPPTDLTDSDQNTLFQYLYRRLAAYRNAAELHALAEYQLSALPEENKQKIKDDFSQTLNEWAQELVDKAY # MVCGQPDGARTRSFLFNDIFEDAAPDEELIVATLKHPDQALQEAQQKAEASTKDHASKSKTLRMVGISLGAIAGGVLVGVTGGLAAPLIGASITTILG # WLGVGGTAAGLLASGLAGSSAICGALFGVYGAKSTANMVERHTREIRDLAILPVSLNTNGDETLGVRLCISGWLSSESDVTAPWTVFEGDDTLALRWV # RDVIFVFFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g818 ### # start gene g819 Scaffold_1 AUGUSTUS gene 3911349 3912509 0.51 + . g819 Scaffold_1 AUGUSTUS transcript 3911349 3912509 0.51 + . g819.t1 Scaffold_1 AUGUSTUS start_codon 3911349 3911351 . + 0 transcript_id "g819.t1"; gene_id "g819"; Scaffold_1 AUGUSTUS CDS 3911349 3912509 0.51 + 0 transcript_id "g819.t1"; gene_id "g819"; Scaffold_1 AUGUSTUS stop_codon 3912507 3912509 . + 0 transcript_id "g819.t1"; gene_id "g819"; # protein sequence = [MQRNIVPQLPDRRRIRGAVSPSSNDPSSTPAKPSRKPRGNPIPARQIRPVESSNFTNELASVINASGNSISGAISSTS # ARRVQSSSSTHQDRSKRNEVQKQSNISVSTGKRRLIQSDIESDSSADLPIVAKPHIPPASSKTMLDRAGLKFRRSIVPLGKKRGEQPHATAPPGPSFS # SSMAIQNNRHRDRAVRKDSISLLDTLSQMSSPAPEETFVKPSNTDKPLLPVARKRRERSPDNVRVPAAESSRMGAKAPRRAGTSRRRSGSESPERDDR # RESQSTHNKGGLALDEISLLRLENTELRFRLANLEHAVHQPTPVQQAQIQDPNAFYLHATFIQRTVQHAVADTLQTVINSMPPSAAIVSTSVSRSIEA # FTMNGLGRSTHLPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g819 ### # start gene g820 Scaffold_1 AUGUSTUS gene 3913808 3914320 0.35 - . g820 Scaffold_1 AUGUSTUS transcript 3913808 3914320 0.35 - . g820.t1 Scaffold_1 AUGUSTUS stop_codon 3913808 3913810 . - 0 transcript_id "g820.t1"; gene_id "g820"; Scaffold_1 AUGUSTUS CDS 3913808 3914320 0.35 - 0 transcript_id "g820.t1"; gene_id "g820"; Scaffold_1 AUGUSTUS start_codon 3914318 3914320 . - 0 transcript_id "g820.t1"; gene_id "g820"; # protein sequence = [MVAQMQSAGITASPDRRREHRDDRRRASQVGNVVPPSPALVRHGSKQRKAPNNLNTLSPGGVNTPGQLTPHSTAAQIN # VPVGSQQRGSPQHPYASVSGGYDYTADDTYVQQQQYGRASPMVSSSAAPPALSNVRARGGDVGVSRGEHDGQELEDSPPRMTLLRILTCRCG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g820 ### # start gene g821 Scaffold_1 AUGUSTUS gene 3935367 3936176 1 - . g821 Scaffold_1 AUGUSTUS transcript 3935367 3936176 1 - . g821.t1 Scaffold_1 AUGUSTUS stop_codon 3935367 3935369 . - 0 transcript_id "g821.t1"; gene_id "g821"; Scaffold_1 AUGUSTUS CDS 3935367 3936176 1 - 0 transcript_id "g821.t1"; gene_id "g821"; Scaffold_1 AUGUSTUS start_codon 3936174 3936176 . - 0 transcript_id "g821.t1"; gene_id "g821"; # protein sequence = [MGDDKIRSTKLKFKGDKQKKKRRREDAEEGSSDNKRRKEDNVDPDTWVFPENPNEIRGPTFIIHPSDPSPISLNFSST # TNRVVLHFIDKEKSEDDSEPQSLLERTPTDISQVWVTTRVAGSPTINIRSGSGEGKFLSANTLGIVSCDRDARGPQEEWTPVIMPDGMTALMNSYEKY # LGIDEVAGGSLQLRADSDEVGFKERFWLKIQSKYKKEANEEEKTKKEGMAGPPKIDESATKSVLYVTLSKYLADSRSAISIKRGVLDKCCLFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g821 ### # start gene g822 Scaffold_1 AUGUSTUS gene 3942523 3942918 0.77 + . g822 Scaffold_1 AUGUSTUS transcript 3942523 3942918 0.77 + . g822.t1 Scaffold_1 AUGUSTUS start_codon 3942523 3942525 . + 0 transcript_id "g822.t1"; gene_id "g822"; Scaffold_1 AUGUSTUS CDS 3942523 3942918 0.77 + 0 transcript_id "g822.t1"; gene_id "g822"; Scaffold_1 AUGUSTUS stop_codon 3942916 3942918 . + 0 transcript_id "g822.t1"; gene_id "g822"; # protein sequence = [MIEISLSPSTITTILNDPSVLARASSIGLPDEQALHVLEHGYEAGFKTFFIINASLGVMATIVSATMVKHKELSRDDD # EKLKSEAKAGLKKQEENQDTEAGVQSSELVVKRDTEMEVSDVRMVSRAGSLKM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g822 ### # start gene g823 Scaffold_1 AUGUSTUS gene 3955827 3957842 0.66 - . g823 Scaffold_1 AUGUSTUS transcript 3955827 3957842 0.66 - . g823.t1 Scaffold_1 AUGUSTUS stop_codon 3955827 3955829 . - 0 transcript_id "g823.t1"; gene_id "g823"; Scaffold_1 AUGUSTUS CDS 3955827 3957842 0.66 - 0 transcript_id "g823.t1"; gene_id "g823"; Scaffold_1 AUGUSTUS start_codon 3957840 3957842 . - 0 transcript_id "g823.t1"; gene_id "g823"; # protein sequence = [MSIDQNRPAVASLPMVFDVDDVSPVPSSEVPDLMLAQNPPHSLSHSLPEPLPPFSNLPNGSVTTVHVPLSNLTSSAFM # DSPTPLDPVAFSSTASSSATFIPEFNPSFSVTSPVENGMAVKLPTSRHASSLSPPMNHSVPSSALHGPASSYSACSSSLQSALESSVPSPGQHSPSLT # LPVNIAMPVPSALVVPPPPPAETISLTSDERALTIGRDILDQYVLHFLWHTSHNLIVLLFRVVQSASTAADLCRSEVNGRADAGKIVDIVDDLRSKLA # YVSDVISGFKEMSVVDHPMYTQSNAVTDYPTPLPPVFESPETYAVNHSTVNHPNSLNNHPYVVDSTLDLTRKRCVTDTDAERRVKFKIEPQDDPSPPS # SSNVYPSVNDISHIHALQSPPPSRPATPPSGHHFVFNPVKSTSKYPSIANGSVQSVDNTPAPKFPPLRSVWSESVVPTRHSHSMSTGSISARPVADTS # LPPTAVSQPVIPGRMNRSGSIGGAFVHPFTFAYGQAAPPQWQSSSASHPPAPASSRTSPDVGGIGDHYEDGGDDDDDEDSPRSGYHSQVCSFLFSSHP # SDHLCSRHHRLMFLRSIAVKLTASSLSISTKRVRIVRAHNVSLRVITELTLTYIVDATDSKGESIHQTLMAKKMQRLDESPDFRPFKFRIQAFTNAFL # EEVRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g823 ### # start gene g824 Scaffold_1 AUGUSTUS gene 3961096 3961596 0.92 - . g824 Scaffold_1 AUGUSTUS transcript 3961096 3961596 0.92 - . g824.t1 Scaffold_1 AUGUSTUS stop_codon 3961096 3961098 . - 0 transcript_id "g824.t1"; gene_id "g824"; Scaffold_1 AUGUSTUS CDS 3961096 3961596 0.92 - 0 transcript_id "g824.t1"; gene_id "g824"; Scaffold_1 AUGUSTUS start_codon 3961594 3961596 . - 0 transcript_id "g824.t1"; gene_id "g824"; # protein sequence = [MEERDSQNYTAFHVAIQQGHLKIIAYLFEHYPPQDPDHNQLYVPPPSISVLSLALQSHEPEVVFKVLQPENKLSNSRD # INDAWSWINSPEGLSAMTRYSKGISGDIVVKFNDICTLLGQFGGFTPPATPILNRKNKSSSPVSKVVPQTDQHYNSRKGRGRGRARVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g824 ### # start gene g825 Scaffold_1 AUGUSTUS gene 3966743 3967513 0.74 - . g825 Scaffold_1 AUGUSTUS transcript 3966743 3967513 0.74 - . g825.t1 Scaffold_1 AUGUSTUS stop_codon 3966743 3966745 . - 0 transcript_id "g825.t1"; gene_id "g825"; Scaffold_1 AUGUSTUS CDS 3966743 3967513 0.74 - 0 transcript_id "g825.t1"; gene_id "g825"; Scaffold_1 AUGUSTUS start_codon 3967511 3967513 . - 0 transcript_id "g825.t1"; gene_id "g825"; # protein sequence = [MVHILGINLPDNQLARVRSYAFSLICTTYANACIQFALTTIYGVGPHLSHRLCARFQIHDKCRVKDLTPLQTTSLASF # LQSPKTALPLPQYPLAPLNFVARPPSKSIQELQAEFNAARAAQKQKREEKLLQMGKSTAEDVKGKTTRGRKAPEKKSRDPLTELRIESELRREIRENI # AHQRMIGSYVGRRHAMHLPVSSILTFIARQQHSFCFAGSWTKNTDQRQDGSQTQQFGQMVNVDYCRTNAAHFFVTLSFLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g825 ### # start gene g826 Scaffold_1 AUGUSTUS gene 3967634 3968405 0.74 + . g826 Scaffold_1 AUGUSTUS transcript 3967634 3968405 0.74 + . g826.t1 Scaffold_1 AUGUSTUS start_codon 3967634 3967636 . + 0 transcript_id "g826.t1"; gene_id "g826"; Scaffold_1 AUGUSTUS CDS 3967634 3967908 0.78 + 0 transcript_id "g826.t1"; gene_id "g826"; Scaffold_1 AUGUSTUS CDS 3967973 3968405 0.88 + 1 transcript_id "g826.t1"; gene_id "g826"; Scaffold_1 AUGUSTUS stop_codon 3968403 3968405 . + 0 transcript_id "g826.t1"; gene_id "g826"; # protein sequence = [MATSKAEGRREDALAKERERMREEFERQKKNLIDETEKSRPSSHRFVGQNDSMEDSLKYSTVGLVHLEEFQQKRKELE # EAKAREAARTNELKDDIKKVKKRKKAAKATLSFAMDDEGEGEESISKAESEPRSASKDEEDADGDGDDERAKKRSKFRKNPNVDTSFLPDREREEAER # KERERLRQEFLRKQEELKNEDIEITYSYWDGSGHRKSVVVSCSPLVFPLFSGLTSSLYA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g826 ### # start gene g827 Scaffold_1 AUGUSTUS gene 3987284 3987742 0.39 + . g827 Scaffold_1 AUGUSTUS transcript 3987284 3987742 0.39 + . g827.t1 Scaffold_1 AUGUSTUS start_codon 3987284 3987286 . + 0 transcript_id "g827.t1"; gene_id "g827"; Scaffold_1 AUGUSTUS CDS 3987284 3987742 0.39 + 0 transcript_id "g827.t1"; gene_id "g827"; Scaffold_1 AUGUSTUS stop_codon 3987740 3987742 . + 0 transcript_id "g827.t1"; gene_id "g827"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVPQQLRSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g827 ### # start gene g828 Scaffold_1 AUGUSTUS gene 3987864 3988808 0.88 + . g828 Scaffold_1 AUGUSTUS transcript 3987864 3988808 0.88 + . g828.t1 Scaffold_1 AUGUSTUS start_codon 3987864 3987866 . + 0 transcript_id "g828.t1"; gene_id "g828"; Scaffold_1 AUGUSTUS CDS 3987864 3988808 0.88 + 0 transcript_id "g828.t1"; gene_id "g828"; Scaffold_1 AUGUSTUS stop_codon 3988806 3988808 . + 0 transcript_id "g828.t1"; gene_id "g828"; # protein sequence = [MGINEWLAFASESTEEEVEEILEAGRSAMEKVTPKPEGSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREWTLSRP # PHLRHRKPEHTQDSFKVWSDSQGFNKTQQLPEKAAHSGYPCGGTKIGPNHTRETHQLNRSCWDGSSTEGGNPSVLPSYIATKEESPTEEMLRASDSSA # TEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYDIKIETEGDAIPPIGKLYNMSEKELKSLKE # YIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTCDSAWTIEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g828 ### # start gene g829 Scaffold_1 AUGUSTUS gene 3989277 3990938 0.43 + . g829 Scaffold_1 AUGUSTUS transcript 3989277 3990938 0.43 + . g829.t1 Scaffold_1 AUGUSTUS start_codon 3989277 3989279 . + 0 transcript_id "g829.t1"; gene_id "g829"; Scaffold_1 AUGUSTUS CDS 3989277 3990938 0.43 + 0 transcript_id "g829.t1"; gene_id "g829"; Scaffold_1 AUGUSTUS stop_codon 3990936 3990938 . + 0 transcript_id "g829.t1"; gene_id "g829"; # protein sequence = [MDWPKPRTVKELQAFLGFANFYRRFIDNYSGITKVFTKLLRKDSVWNWTPQCSSAFELLKSAFSEAPVLGHYNPDLPV # VLECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQARWAEL # LSGYDFVINYRPGRLGAKPDALTRRSDVYPKKGASRDQVLAGRERVLIPPERLNATILMNEDLLVNRVREAPKDTTIIEALKRIARNEEESFVWEDGL # IKRGGRIYVPDVGTLRREVLQSYHDHKLRGHPGEKRTKKLVNQLFFWKGLSKDVNYYVRSCHSCLRAKASRSKPYGNLRPLPIGQRPWSSISLDHITQ # LPATAGPEKYDAILVVVCRLTKQAIYVPCHTTDKAEDFANLFITYVFSKHGMPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQTERVN # QSVEAYLRIYCSYDQDDWDLLLPMAEFVYNNTPNTTTGVSPFFANKGYHPKLSITLEQVQERRSMSTRPTSRSYMRTSRNESG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g829 ### # start gene g830 Scaffold_1 AUGUSTUS gene 3996816 3997295 0.46 - . g830 Scaffold_1 AUGUSTUS transcript 3996816 3997295 0.46 - . g830.t1 Scaffold_1 AUGUSTUS stop_codon 3996816 3996818 . - 0 transcript_id "g830.t1"; gene_id "g830"; Scaffold_1 AUGUSTUS CDS 3996816 3997295 0.46 - 0 transcript_id "g830.t1"; gene_id "g830"; Scaffold_1 AUGUSTUS start_codon 3997293 3997295 . - 0 transcript_id "g830.t1"; gene_id "g830"; # protein sequence = [MKALLKRLGIESALTMSYHPETNGQTERANQEIKRYIRMYVSRRQDDWDHLLPTAEFVINSRVHFAHDKAPFEVLYGY # TPEFSIPIGSWKEYPSITDRLDALRHAREDAEAALRMSKQRIADTIAEHPNQPSFEVGQPVWLSVNNLKFDAKVRSWEAAD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g830 ### # start gene g831 Scaffold_1 AUGUSTUS gene 3998328 3998630 0.9 + . g831 Scaffold_1 AUGUSTUS transcript 3998328 3998630 0.9 + . g831.t1 Scaffold_1 AUGUSTUS start_codon 3998328 3998330 . + 0 transcript_id "g831.t1"; gene_id "g831"; Scaffold_1 AUGUSTUS CDS 3998328 3998630 0.9 + 0 transcript_id "g831.t1"; gene_id "g831"; Scaffold_1 AUGUSTUS stop_codon 3998628 3998630 . + 0 transcript_id "g831.t1"; gene_id "g831"; # protein sequence = [MEEDQQFEYSTLYTGDGQPVQVLTPRRGQPPVVAPAQGRSTTRIDSPILQAIVRRTGKQPQRRAASESPRDPPPHFDL # DTGDHDDQDPPVTPMTRAPTKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g831 ### # start gene g832 Scaffold_1 AUGUSTUS gene 4000835 4001728 0.71 + . g832 Scaffold_1 AUGUSTUS transcript 4000835 4001728 0.71 + . g832.t1 Scaffold_1 AUGUSTUS start_codon 4000835 4000837 . + 0 transcript_id "g832.t1"; gene_id "g832"; Scaffold_1 AUGUSTUS CDS 4000835 4001728 0.71 + 0 transcript_id "g832.t1"; gene_id "g832"; Scaffold_1 AUGUSTUS stop_codon 4001726 4001728 . + 0 transcript_id "g832.t1"; gene_id "g832"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRR # GVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKD # LLGIKLESLIPRELTEEQQQWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g832 ### # start gene g833 Scaffold_1 AUGUSTUS gene 4001812 4002360 0.52 + . g833 Scaffold_1 AUGUSTUS transcript 4001812 4002360 0.52 + . g833.t1 Scaffold_1 AUGUSTUS start_codon 4001812 4001814 . + 0 transcript_id "g833.t1"; gene_id "g833"; Scaffold_1 AUGUSTUS CDS 4001812 4002360 0.52 + 0 transcript_id "g833.t1"; gene_id "g833"; Scaffold_1 AUGUSTUS stop_codon 4002358 4002360 . + 0 transcript_id "g833.t1"; gene_id "g833"; # protein sequence = [MTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMP # EGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQD # SSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g833 ### # start gene g834 Scaffold_1 AUGUSTUS gene 4002390 4004802 0.13 + . g834 Scaffold_1 AUGUSTUS transcript 4002390 4004802 0.13 + . g834.t1 Scaffold_1 AUGUSTUS start_codon 4002390 4002392 . + 0 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS CDS 4002390 4003113 0.9 + 0 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS CDS 4003164 4003543 0.3 + 2 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS CDS 4003877 4004169 0.31 + 0 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS CDS 4004225 4004414 0.99 + 1 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS CDS 4004557 4004802 0.98 + 0 transcript_id "g834.t1"; gene_id "g834"; Scaffold_1 AUGUSTUS stop_codon 4004800 4004802 . + 0 transcript_id "g834.t1"; gene_id "g834"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQRILQKDIVESFLRDLSIDDERRNIAIVANQSVAYE # DHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHQNIV # LDGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSFFLQNGGSSLNPLGEN # CDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRWFDMKYSKEELNHSKDLNRQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYK # PVEKKVNPIKATLPDEFRIERHIHGDPLELPDCRTVKIMYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g834 ### # start gene g835 Scaffold_1 AUGUSTUS gene 4005443 4005874 0.65 + . g835 Scaffold_1 AUGUSTUS transcript 4005443 4005874 0.65 + . g835.t1 Scaffold_1 AUGUSTUS start_codon 4005443 4005445 . + 0 transcript_id "g835.t1"; gene_id "g835"; Scaffold_1 AUGUSTUS CDS 4005443 4005874 0.65 + 0 transcript_id "g835.t1"; gene_id "g835"; Scaffold_1 AUGUSTUS stop_codon 4005872 4005874 . + 0 transcript_id "g835.t1"; gene_id "g835"; # protein sequence = [MMCKQEAGFAWQPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIFKDVCKIIKSKIDSGIYEPSNASYRLKWFC # VIKKDGKSLRLVHSLEPLNKVTIQHSGVPPAIADLARSFSGRSCGGTLDLYIGYDERELDICLET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g835 ### # start gene g836 Scaffold_1 AUGUSTUS gene 4006222 4006593 0.66 + . g836 Scaffold_1 AUGUSTUS transcript 4006222 4006593 0.66 + . g836.t1 Scaffold_1 AUGUSTUS start_codon 4006222 4006224 . + 0 transcript_id "g836.t1"; gene_id "g836"; Scaffold_1 AUGUSTUS CDS 4006222 4006593 0.66 + 0 transcript_id "g836.t1"; gene_id "g836"; Scaffold_1 AUGUSTUS stop_codon 4006591 4006593 . + 0 transcript_id "g836.t1"; gene_id "g836"; # protein sequence = [MKAVCQKKHIAQVVLEWPSCRDKTKVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRD # CPALRPINFDWDVYLAVDTSYKLWDGISIKLIHLRRRSSSITLDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g836 ### # start gene g837 Scaffold_1 AUGUSTUS gene 4006734 4007115 0.39 + . g837 Scaffold_1 AUGUSTUS transcript 4006734 4007115 0.39 + . g837.t1 Scaffold_1 AUGUSTUS start_codon 4006734 4006736 . + 0 transcript_id "g837.t1"; gene_id "g837"; Scaffold_1 AUGUSTUS CDS 4006734 4006752 0.39 + 0 transcript_id "g837.t1"; gene_id "g837"; Scaffold_1 AUGUSTUS CDS 4006826 4007115 0.99 + 2 transcript_id "g837.t1"; gene_id "g837"; Scaffold_1 AUGUSTUS stop_codon 4007113 4007115 . + 0 transcript_id "g837.t1"; gene_id "g837"; # protein sequence = [MLDNPSCATLDGLSQITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEA # DDIELDVQELWMKSEATRFVGTTY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g837 ### # start gene g838 Scaffold_1 AUGUSTUS gene 4013681 4015539 0.3 - . g838 Scaffold_1 AUGUSTUS transcript 4013681 4015539 0.3 - . g838.t1 Scaffold_1 AUGUSTUS stop_codon 4013681 4013683 . - 0 transcript_id "g838.t1"; gene_id "g838"; Scaffold_1 AUGUSTUS CDS 4013681 4015051 1 - 0 transcript_id "g838.t1"; gene_id "g838"; Scaffold_1 AUGUSTUS CDS 4015240 4015539 0.3 - 0 transcript_id "g838.t1"; gene_id "g838"; Scaffold_1 AUGUSTUS start_codon 4015537 4015539 . - 0 transcript_id "g838.t1"; gene_id "g838"; # protein sequence = [MVGRSSEDKKIDALPVGLWADSVGGLDIPPSRGVSNDIRLVNPQHADHESIVPVQALQAEHFTDPDTLGPDFFPDALD # QVDDVNLFTRNDGEQGAFRPERAKLLTPPQREYLHAKVDELLEAGVIERCNPEDVKCVSPLTLAQKVHEGRGLTVEELKYKLNDECVAAGLPASFDLP # TRQVQPSGPPERAELARPAKWRICQNFMAINKLTEIAPMPQGNIRSKQQSLSGHNYICLFDFASGFYACEVERGSRPYTAFYVEGKGYFWCAKLPFGL # TGAPSTFANMTALHLDDLIADGTIELFVDDGGSADDDFESMFAKLTRILDRVRARDLSLSAAKSEFFMSEGIFAGGKISKEGVTADPAKLTAMEWKQP # ADALNLASFVGLTGHFRDLIRNYARIEGPLRNLLKSVPLPQNYTKSTYRRAMESFRLEGKWTLDHTKAFLVLKQALVSEPVLKAPRWDGSSFVVTTDG # CKEGFAAVVAQRFEVVHPNGTTTYKMHPVGFASKRTSASEQNYKPFLLEFAALKFGLDKFSDMIWGFPVEIETDCQALRDVIATTN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g838 ### # start gene g839 Scaffold_1 AUGUSTUS gene 4016793 4017602 0.98 - . g839 Scaffold_1 AUGUSTUS transcript 4016793 4017602 0.98 - . g839.t1 Scaffold_1 AUGUSTUS stop_codon 4016793 4016795 . - 0 transcript_id "g839.t1"; gene_id "g839"; Scaffold_1 AUGUSTUS CDS 4016793 4017602 0.98 - 0 transcript_id "g839.t1"; gene_id "g839"; Scaffold_1 AUGUSTUS start_codon 4017600 4017602 . - 0 transcript_id "g839.t1"; gene_id "g839"; # protein sequence = [MTTSEDTNQPYHQWWADRLLRLAKGAEIEKTKQSIGAVWKKLPYALKKTVDEEHDNWADFTSAIKAVKWGVLKVEAEH # EASRKVLPPIPETPRTKLARDFAAARISSPPSPSPMRARPAYAGNIGGRKPRRVFTSLNEARKEVLRRGIAAKVQQPNTPEGFAAWKAELLEWASRHG # VDGALSELTIVPLKPGTEAVCSGECFRCGGTRHGFEVPCPKPGAIPPVESDWRAYCQRELGGRVARVNAVHVLGPEAIFEGMVESGNGEGSAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g839 ### # start gene g840 Scaffold_1 AUGUSTUS gene 4020295 4021697 0.19 - . g840 Scaffold_1 AUGUSTUS transcript 4020295 4021697 0.19 - . g840.t1 Scaffold_1 AUGUSTUS stop_codon 4020295 4020297 . - 0 transcript_id "g840.t1"; gene_id "g840"; Scaffold_1 AUGUSTUS CDS 4020295 4021222 0.84 - 1 transcript_id "g840.t1"; gene_id "g840"; Scaffold_1 AUGUSTUS CDS 4021495 4021697 0.29 - 0 transcript_id "g840.t1"; gene_id "g840"; Scaffold_1 AUGUSTUS start_codon 4021695 4021697 . - 0 transcript_id "g840.t1"; gene_id "g840"; # protein sequence = [MSQCSWDGGINHEVRSLSSETDSNYSNDSADRHSESESDWDADDEDILEMNPDHLIEKMIRREEEIESESASLMRRFF # AQPPKLGTTLGSPSSPFPSTSPSPSPSPSPSPSPSPSMASLAPLSMGNNIFRGYLSDLEISDQESDNESIFSKDDTPHSHSRAPSPSPAPLSQSIIGP # EAILNLHPVPPSKRRKLDVSARETKRIAKEERKKQYSAAFDAIDKVLKSRKTEFWAGCNSLQERRAHAIHGVLLMVVKRQMALIPASKSSATTHGFAP # NHGSRMLRGWVKSWILTRELPTSSRGSHAKVFSLLSDPTLRAEIRSYLRSNKWAMNPGKFQAFVNKTMLPDAAKAYAKQITATEMPEGLKKYFELELF # LGLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g840 ### # start gene g841 Scaffold_1 AUGUSTUS gene 4021942 4022592 0.3 - . g841 Scaffold_1 AUGUSTUS transcript 4021942 4022592 0.3 - . g841.t1 Scaffold_1 AUGUSTUS stop_codon 4021942 4021944 . - 0 transcript_id "g841.t1"; gene_id "g841"; Scaffold_1 AUGUSTUS CDS 4021942 4022354 0.9 - 2 transcript_id "g841.t1"; gene_id "g841"; Scaffold_1 AUGUSTUS CDS 4022436 4022476 0.43 - 1 transcript_id "g841.t1"; gene_id "g841"; Scaffold_1 AUGUSTUS CDS 4022579 4022592 0.37 - 0 transcript_id "g841.t1"; gene_id "g841"; Scaffold_1 AUGUSTUS start_codon 4022590 4022592 . - 0 transcript_id "g841.t1"; gene_id "g841"; # protein sequence = [MTHSIKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLELQSTKFIAATLNFQAAEFEFNANLFKTYATRAR # IAKVIADEACSILKSRQDSGSDSSASGASFTTAQSIPTTGSEDTVVTPMVQSGIRQPIRNRRHLGWRKFFYIYSTEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g841 ### # start gene g842 Scaffold_1 AUGUSTUS gene 4027394 4027732 1 - . g842 Scaffold_1 AUGUSTUS transcript 4027394 4027732 1 - . g842.t1 Scaffold_1 AUGUSTUS stop_codon 4027394 4027396 . - 0 transcript_id "g842.t1"; gene_id "g842"; Scaffold_1 AUGUSTUS CDS 4027394 4027732 1 - 0 transcript_id "g842.t1"; gene_id "g842"; Scaffold_1 AUGUSTUS start_codon 4027730 4027732 . - 0 transcript_id "g842.t1"; gene_id "g842"; # protein sequence = [MSSKTAHTEKPPAVTVDAEDIWKQSAKTSSWDSDETEADAQQISATGPTPFSLFPNESVQIASSTPTSAPATVPATPS # PPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g842 ### # start gene g843 Scaffold_1 AUGUSTUS gene 4028749 4029105 0.95 - . g843 Scaffold_1 AUGUSTUS transcript 4028749 4029105 0.95 - . g843.t1 Scaffold_1 AUGUSTUS stop_codon 4028749 4028751 . - 0 transcript_id "g843.t1"; gene_id "g843"; Scaffold_1 AUGUSTUS CDS 4028749 4029105 0.95 - 0 transcript_id "g843.t1"; gene_id "g843"; Scaffold_1 AUGUSTUS start_codon 4029103 4029105 . - 0 transcript_id "g843.t1"; gene_id "g843"; # protein sequence = [MSTLIPPATPAPPASAEDLMTQLIKQVANLATAMEERSSSKSSMNKPKVFKGKDSAEVRRFMAQFQNWAPEQPDLTKS # QAKLIKSALGFFTESAGDWATPHLLHFNAEHPPLEEIGSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g843 ### # start gene g844 Scaffold_1 AUGUSTUS gene 4030844 4032213 0.3 - . g844 Scaffold_1 AUGUSTUS transcript 4030844 4032213 0.3 - . g844.t1 Scaffold_1 AUGUSTUS stop_codon 4030844 4030846 . - 0 transcript_id "g844.t1"; gene_id "g844"; Scaffold_1 AUGUSTUS CDS 4030844 4031387 0.54 - 1 transcript_id "g844.t1"; gene_id "g844"; Scaffold_1 AUGUSTUS CDS 4032206 4032213 0.3 - 0 transcript_id "g844.t1"; gene_id "g844"; Scaffold_1 AUGUSTUS start_codon 4032211 4032213 . - 0 transcript_id "g844.t1"; gene_id "g844"; # protein sequence = [MKGLLTGILMMAATMKMTELPANDAGARRSLARCRLARGALSFVNPAMMQRYDARTPGGLQREGGGNPTGEHLAVLES # QMAQLLADNRQFREEQVKSNTYNCHFNRNLDWLIMDAARRRSPPELPQAGPLQLPRKRRRVVDSQKEEEEEEEEVEVEVEERGEEERDELAPKRAQSE # KGKKKEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g844 ### # start gene g845 Scaffold_1 AUGUSTUS gene 4034156 4034506 0.69 + . g845 Scaffold_1 AUGUSTUS transcript 4034156 4034506 0.69 + . g845.t1 Scaffold_1 AUGUSTUS start_codon 4034156 4034158 . + 0 transcript_id "g845.t1"; gene_id "g845"; Scaffold_1 AUGUSTUS CDS 4034156 4034506 0.69 + 0 transcript_id "g845.t1"; gene_id "g845"; Scaffold_1 AUGUSTUS stop_codon 4034504 4034506 . + 0 transcript_id "g845.t1"; gene_id "g845"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWRRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g845 ### # start gene g846 Scaffold_1 AUGUSTUS gene 4041100 4041909 0.56 + . g846 Scaffold_1 AUGUSTUS transcript 4041100 4041909 0.56 + . g846.t1 Scaffold_1 AUGUSTUS start_codon 4041100 4041102 . + 0 transcript_id "g846.t1"; gene_id "g846"; Scaffold_1 AUGUSTUS CDS 4041100 4041909 0.56 + 0 transcript_id "g846.t1"; gene_id "g846"; Scaffold_1 AUGUSTUS stop_codon 4041907 4041909 . + 0 transcript_id "g846.t1"; gene_id "g846"; # protein sequence = [MSWAAQRLKDQWEAHIGGLKAQYQVQLQEAETLREQRRQEAAVAESLAEAERQEKERELTKEAEKKRLPIYDFQKGLG # VDSIPLQLHPYAKKMMMARKYTPLWYFLPDAAVEAKERSKESLDTNHLQFAVEDSNSLSGSTVSLVGSHSVRASPNAIPNSQLSWPQVMRAKSAFLNA # IRLGTWPDHFIAMFAGFYSNMDMHRELQEQDGDRVMAHYHAEMRLAWYNAMERKAPFDLSIISDRVLGESRQQIVKQKQEKSLKGKQFSPSMK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g846 ### # start gene g847 Scaffold_1 AUGUSTUS gene 4042141 4043232 0.89 + . g847 Scaffold_1 AUGUSTUS transcript 4042141 4043232 0.89 + . g847.t1 Scaffold_1 AUGUSTUS start_codon 4042141 4042143 . + 0 transcript_id "g847.t1"; gene_id "g847"; Scaffold_1 AUGUSTUS CDS 4042141 4043232 0.89 + 0 transcript_id "g847.t1"; gene_id "g847"; Scaffold_1 AUGUSTUS stop_codon 4043230 4043232 . + 0 transcript_id "g847.t1"; gene_id "g847"; # protein sequence = [MNHQTFKPPQHRWKQGSKPGFNNCPRRPQTLPRVLGNPPIEHAKLPIPPHLLAKPVDKPKTINQTPPIFNAPFGTQTN # HSSHAATNVSDGTNTTSATVRGHQSGMENAESPATGTSTDISRSLKEPTRVWNSAQTGRDRMDAPVGPTPRNTSAQVALTATTELAAAPTENRFIVRT # PLQAKEWKSAITRLNLAHKYPTLAESIQHGFNVGIPKIKHTFSPPNKLNSSESIAAFHEISTGRWLGPYSKETIERTIGPFQTSPISMIPKSGKPGKF # RLLENLSYPYRPTFIPSIPAVISSINSHIDSTLYPCLWGTFATTCRLIWTLPPDSQGAVRDISEAYRLIPLLHHNGREPLLEHLKRNIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g847 ### # start gene g848 Scaffold_1 AUGUSTUS gene 4044018 4044437 0.77 + . g848 Scaffold_1 AUGUSTUS transcript 4044018 4044437 0.77 + . g848.t1 Scaffold_1 AUGUSTUS start_codon 4044018 4044020 . + 0 transcript_id "g848.t1"; gene_id "g848"; Scaffold_1 AUGUSTUS CDS 4044018 4044437 0.77 + 0 transcript_id "g848.t1"; gene_id "g848"; Scaffold_1 AUGUSTUS stop_codon 4044435 4044437 . + 0 transcript_id "g848.t1"; gene_id "g848"; # protein sequence = [MPTLTPAAALALAYTSAATGEPIVYSQDGEEGTKNGTLGGPKQSASISLSSSSPGKQPQGDNTKYGVTMKEWSRGGGT # EEAETEPRTIYSDTFTKSLHVAISESTPDMLPVLTTQPIRSREAPVAEQNTSSQRLTSLTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g848 ### # start gene g849 Scaffold_1 AUGUSTUS gene 4050767 4051027 0.53 - . g849 Scaffold_1 AUGUSTUS transcript 4050767 4051027 0.53 - . g849.t1 Scaffold_1 AUGUSTUS stop_codon 4050767 4050769 . - 0 transcript_id "g849.t1"; gene_id "g849"; Scaffold_1 AUGUSTUS CDS 4050767 4051027 0.53 - 0 transcript_id "g849.t1"; gene_id "g849"; Scaffold_1 AUGUSTUS start_codon 4051025 4051027 . - 0 transcript_id "g849.t1"; gene_id "g849"; # protein sequence = [MEAMAEANADAKEIDEAVRIGGDVAIGVPDFDDAELEEELHRLAIESVEEKQDESRETKLGSLPAAPLHDVWETSRTN # PEREAVAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g849 ### # start gene g850 Scaffold_1 AUGUSTUS gene 4052984 4054225 0.46 + . g850 Scaffold_1 AUGUSTUS transcript 4052984 4054225 0.46 + . g850.t1 Scaffold_1 AUGUSTUS start_codon 4052984 4052986 . + 0 transcript_id "g850.t1"; gene_id "g850"; Scaffold_1 AUGUSTUS CDS 4052984 4053101 0.46 + 0 transcript_id "g850.t1"; gene_id "g850"; Scaffold_1 AUGUSTUS CDS 4053267 4054225 0.81 + 2 transcript_id "g850.t1"; gene_id "g850"; Scaffold_1 AUGUSTUS stop_codon 4054223 4054225 . + 0 transcript_id "g850.t1"; gene_id "g850"; # protein sequence = [MWETDLERAESEKIRVRVHWFDRPSDLPSIRAKRYHHDVSRWIIKSIEDVDQKFQCLLAIDSRRGIYYNFDWSLHRKE # ALEARTTLTDSEWGTGNAWDVTAMDEFQDDAQGRVKAEEKKSSRTSASPRKRVKDESEEKEEGEEESHKPTAKKHTQRKPARQRRAVTNSEDRSKSTK # PMPKPKRTVRMVKEDVLELDDDLSSGAEYKDEELSDEDEEHEAELSDNASEPATSDEDDIDDDVPKTPSRKRKRAATTTPRKQRGRTFAQPTPHSKAA # LSRRNRSITGSPSKKRALPVKSQNTYAASKSLFHHLPEDPWLRAMHALHVGSRPDALPCRESEFQLVHKSVSQLLEEGSGGCIC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g850 ### # start gene g851 Scaffold_1 AUGUSTUS gene 4060681 4061166 0.93 - . g851 Scaffold_1 AUGUSTUS transcript 4060681 4061166 0.93 - . g851.t1 Scaffold_1 AUGUSTUS stop_codon 4060681 4060683 . - 0 transcript_id "g851.t1"; gene_id "g851"; Scaffold_1 AUGUSTUS CDS 4060681 4061166 0.93 - 0 transcript_id "g851.t1"; gene_id "g851"; Scaffold_1 AUGUSTUS start_codon 4061164 4061166 . - 0 transcript_id "g851.t1"; gene_id "g851"; # protein sequence = [MHSSSPDSVLCVDATESTALPSTTSTTSSTQSSVTVSQTSSAPASASSTTSTSESLTAPNNPRSNAIGGGVVGGILGL # ALLLLLIGCSIAFRRRRRIRALLRTNSDSEQGALSSPSRGILDNSSKSADSESASADMSEIQSGVTTTQMVRKSETMCSKTRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g851 ### # start gene g852 Scaffold_1 AUGUSTUS gene 4064015 4064811 0.83 - . g852 Scaffold_1 AUGUSTUS transcript 4064015 4064811 0.83 - . g852.t1 Scaffold_1 AUGUSTUS stop_codon 4064015 4064017 . - 0 transcript_id "g852.t1"; gene_id "g852"; Scaffold_1 AUGUSTUS CDS 4064015 4064595 0.9 - 2 transcript_id "g852.t1"; gene_id "g852"; Scaffold_1 AUGUSTUS CDS 4064688 4064811 0.83 - 0 transcript_id "g852.t1"; gene_id "g852"; Scaffold_1 AUGUSTUS start_codon 4064809 4064811 . - 0 transcript_id "g852.t1"; gene_id "g852"; # protein sequence = [MTNFLHFHSPALGGVLASPATQWPQSFGKIAFFHDYPYFLAYVQNVMYFQSSPRLKNKKPQNRASFEESEPLLLDGEP # QIDYGGLTPSTGKTNDDHLKPPSAWELLTPNLKIVLLNYGLLSFTDMSYFVLIPLIYSSSLSIGGLGLSPYQVGLILGIFALLNGFWNLLVLSKILKV # LGPRKMYIISYSSFLVTFPLLWILRDVAHLAGGVNALVWSLIVCQLLAASFVNTAYSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g852 ### # start gene g853 Scaffold_1 AUGUSTUS gene 4066283 4066687 0.87 + . g853 Scaffold_1 AUGUSTUS transcript 4066283 4066687 0.87 + . g853.t1 Scaffold_1 AUGUSTUS start_codon 4066283 4066285 . + 0 transcript_id "g853.t1"; gene_id "g853"; Scaffold_1 AUGUSTUS CDS 4066283 4066687 0.87 + 0 transcript_id "g853.t1"; gene_id "g853"; Scaffold_1 AUGUSTUS stop_codon 4066685 4066687 . + 0 transcript_id "g853.t1"; gene_id "g853"; # protein sequence = [MPSNLTLSDPFKATFYQLDQLFSQYPFISMSTKSLGVALITGASQGIGKAIALRLAKDGYRVALNDIPNKDPQLRSLA # REIEREHGAKTYVTPADVSNESEVEKMVVQTSKALGGLDVVRNTSLGVVGCRLVRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g853 ### # start gene g854 Scaffold_1 AUGUSTUS gene 4068867 4069214 0.99 - . g854 Scaffold_1 AUGUSTUS transcript 4068867 4069214 0.99 - . g854.t1 Scaffold_1 AUGUSTUS stop_codon 4068867 4068869 . - 0 transcript_id "g854.t1"; gene_id "g854"; Scaffold_1 AUGUSTUS CDS 4068867 4069214 0.99 - 0 transcript_id "g854.t1"; gene_id "g854"; Scaffold_1 AUGUSTUS start_codon 4069212 4069214 . - 0 transcript_id "g854.t1"; gene_id "g854"; # protein sequence = [MLEQFLPQETQDRGAANNPNNVKLKNAANDERGTGVWPREVGVQRVVWNSGNGLAAAGMLASATGSGLCRVDVLSGRW # LKEGNVKMPYGGIENIRLEADNVVDDIEADSDEGSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g854 ### # start gene g855 Scaffold_1 AUGUSTUS gene 4070026 4070836 0.14 - . g855 Scaffold_1 AUGUSTUS transcript 4070026 4070836 0.14 - . g855.t1 Scaffold_1 AUGUSTUS stop_codon 4070026 4070028 . - 0 transcript_id "g855.t1"; gene_id "g855"; Scaffold_1 AUGUSTUS CDS 4070026 4070594 0.85 - 2 transcript_id "g855.t1"; gene_id "g855"; Scaffold_1 AUGUSTUS CDS 4070659 4070778 0.58 - 2 transcript_id "g855.t1"; gene_id "g855"; Scaffold_1 AUGUSTUS CDS 4070833 4070836 0.2 - 0 transcript_id "g855.t1"; gene_id "g855"; Scaffold_1 AUGUSTUS start_codon 4070834 4070836 . - 0 transcript_id "g855.t1"; gene_id "g855"; # protein sequence = [MADFIPNSSAHVFNAGAPVWGIDWCPLHPDTRKGASDLGFGPVAPLPSPSHSPEIGIRVQRPSKACIQIWSFGSDAGY # ESASTGREGSTHGASEPNPGRMKCDLVICIDCGPAYELKWCPLPSPSAQTAFAGPKKLGLLAGTFEDGSFAIFAIPDPKDIAPPNHDYSEPHYSEFLL # RCWFIIAQHAAVRLPDPVLRIEMEETCCWSIDWANSEVVAIGMTNGESPRQTQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g855 ### # start gene g856 Scaffold_1 AUGUSTUS gene 4071849 4072487 0.98 - . g856 Scaffold_1 AUGUSTUS transcript 4071849 4072487 0.98 - . g856.t1 Scaffold_1 AUGUSTUS stop_codon 4071849 4071851 . - 0 transcript_id "g856.t1"; gene_id "g856"; Scaffold_1 AUGUSTUS CDS 4071849 4072487 0.98 - 0 transcript_id "g856.t1"; gene_id "g856"; Scaffold_1 AUGUSTUS start_codon 4072485 4072487 . - 0 transcript_id "g856.t1"; gene_id "g856"; # protein sequence = [MCLGSAWSEYKTSGTVHGIPLPPGLVESQQLPEPLFTPSTKAEQGAHDENISPEQGTSSTISAFPNSPMLTIHLASKL # IGESIYAQISQAALKLYSEAAAFAHSKGVILADTKFEFGLVPSTKSPNEETLILVDELLTPDSSRYWPLKGYEVGKSQPSFDKQYLRDWLVGVGFRKG # LERGKEGEEGHGWTIDSSVVEGTRDRYEEAVKLLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g856 ### # start gene g857 Scaffold_1 AUGUSTUS gene 4098429 4099211 0.85 - . g857 Scaffold_1 AUGUSTUS transcript 4098429 4099211 0.85 - . g857.t1 Scaffold_1 AUGUSTUS stop_codon 4098429 4098431 . - 0 transcript_id "g857.t1"; gene_id "g857"; Scaffold_1 AUGUSTUS CDS 4098429 4099211 0.85 - 0 transcript_id "g857.t1"; gene_id "g857"; Scaffold_1 AUGUSTUS start_codon 4099209 4099211 . - 0 transcript_id "g857.t1"; gene_id "g857"; # protein sequence = [MTPWTRIFHTPAARRTSSYFSSKAGSGRYFNSAKPLSAPATPKKATGVDSTESSKNGVTGQALKVAEESSSSRREMLT # RSSVPEFVPSTHPVIGDKDFKLHQFFSLHRPLLLLSDPPSIMRSSPPTSIFSLSKPPSAHALPATEASPEFAAASDAEAARTLARALAINHAGATFVW # EETLKHIGLDVNLEPGRVGLQERLDKELQEVRLDSTRRKKRKKMKKHKLVFSSTFYFYILIPSLRRLKKRRRVSSSDINSEGPF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g857 ### # start gene g858 Scaffold_1 AUGUSTUS gene 4099680 4101350 0.7 + . g858 Scaffold_1 AUGUSTUS transcript 4099680 4101350 0.7 + . g858.t1 Scaffold_1 AUGUSTUS start_codon 4099680 4099682 . + 0 transcript_id "g858.t1"; gene_id "g858"; Scaffold_1 AUGUSTUS CDS 4099680 4101350 0.7 + 0 transcript_id "g858.t1"; gene_id "g858"; Scaffold_1 AUGUSTUS stop_codon 4101348 4101350 . + 0 transcript_id "g858.t1"; gene_id "g858"; # protein sequence = [MSTVFHRIPRVPIDLEKVHNYSRLSRGLSEHQSSEVKVLVGALDEDLRDYDNDITQLEIQLSFLKNQRTRAKNYRKFL # GSLCSPFHRLPNELLGEIFQEVCNDVHVEPWAKYDVSVAPFVLSAVCNRWREFVVGNPKLWTTIRFRCPLEDPEYLSSAQYERLQEVVDLYIERSTTF # HLKVQLFSSPDHEESGLFQYFLTSSPRWKCLSLYVTSLSTSCYPTLRLLDLPVLETVSIHHCLNSDTQVGADLSVFNNAPKLHTLDVLEGGLSTTSNS # TVWDQLTTFTYKTSFGNLTEVLRLCPNLQYLTLTDQRPSDPFAPELPITAPKLTSISVIFGRSYLNRSDMLQTAFLSSLTAPALTTLSLALEQVQRDP # RPLNALTRTSESIFRGIDNFIIQSHCKSQLTKLVLDGMPLEDRDLVSLLKTLPFLEELTVIDPCMEMNRVLPISKAFVQSLHSCSKTSHLQTSDVVLV # PKLHTLILKVVAPGFDHDAFVETILSRWCPANAKPPKDLSPLRRVNLSLSEPINEEDYKLLFTLRRSGLIFSVQLETLLPSKDAYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g858 ### # start gene g859 Scaffold_1 AUGUSTUS gene 4101612 4102250 0.7 - . g859 Scaffold_1 AUGUSTUS transcript 4101612 4102250 0.7 - . g859.t1 Scaffold_1 AUGUSTUS stop_codon 4101612 4101614 . - 0 transcript_id "g859.t1"; gene_id "g859"; Scaffold_1 AUGUSTUS CDS 4101612 4102250 0.7 - 0 transcript_id "g859.t1"; gene_id "g859"; Scaffold_1 AUGUSTUS start_codon 4102248 4102250 . - 0 transcript_id "g859.t1"; gene_id "g859"; # protein sequence = [MEDLSNLSRSSRIESGRSTSTSFFAGSTRWMAPELVLALVEDENHEDERDARDVGKAEPGIERGRPRVTTASDVYAFA # SVCLEVRLFLSTSLVRSNVISAQIVTGDLPYPHRKNDYSVTVDILRGVSPARGSDLSTALKRMFDTTPDNDGSTLNYSPNPSSRAAADNDEEALRSVL # ESCWDGQSFMRPNMEEVLVRLNGIGISEILTPLRLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g859 ### # start gene g860 Scaffold_1 AUGUSTUS gene 4102952 4104031 0.37 - . g860 Scaffold_1 AUGUSTUS transcript 4102952 4104031 0.37 - . g860.t1 Scaffold_1 AUGUSTUS stop_codon 4102952 4102954 . - 0 transcript_id "g860.t1"; gene_id "g860"; Scaffold_1 AUGUSTUS CDS 4102952 4104031 0.37 - 0 transcript_id "g860.t1"; gene_id "g860"; Scaffold_1 AUGUSTUS start_codon 4104029 4104031 . - 0 transcript_id "g860.t1"; gene_id "g860"; # protein sequence = [MEPMDFQVSTSAIPGAKGKTVLSVYSPLIHQVRFQTVLEAFCRFFEGAIWDMKPLCSSTFSDGDHPDSPFSPSSLIPS # YAFKSSDRHSVRKDTCLDVLNKHCWQYSREAEVCLGISVEADCEFILPECCFGILDESFGGGIKNPSRSIGFFPILPKLALYVLRDEDGCRDDVRAKG # PSFIEVGSELGLDIYLRNAMVLCSIPHVQRSSEIFIPHHDLKTPILELDQFTWTTVDSTDSDTATTPTTIAEHLATQLDALSAMEDFQRLADKDMPEL # SGPKLFFSSLSSIVRSISSYDEFRCRWMFDNFIDYSRLKQRCRHKFGMESVKKMWTLRQNIVLSDLTDEVGTVLLFTIIVLLMIN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g860 ### # start gene g861 Scaffold_1 AUGUSTUS gene 4105531 4106082 0.67 + . g861 Scaffold_1 AUGUSTUS transcript 4105531 4106082 0.67 + . g861.t1 Scaffold_1 AUGUSTUS start_codon 4105531 4105533 . + 0 transcript_id "g861.t1"; gene_id "g861"; Scaffold_1 AUGUSTUS CDS 4105531 4106082 0.67 + 0 transcript_id "g861.t1"; gene_id "g861"; Scaffold_1 AUGUSTUS stop_codon 4106080 4106082 . + 0 transcript_id "g861.t1"; gene_id "g861"; # protein sequence = [MSKGSLSNSLVMLCVDFAAHAQERQISYAPAHFASKSVSLRYNPYSHLPITISCLASEELAIGNVKFTTYDLEDICKV # SRARMSYSQCFLLNSLSARRLWRDYFPEVDAIVFLVDSADFERFPESKAELDALLAIEELSKVPFLILGNKIDAQGAVSEEELRHHLGLWQTTGKVRD # HPGLFCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g861 ### # start gene g862 Scaffold_1 AUGUSTUS gene 4108506 4109025 0.43 - . g862 Scaffold_1 AUGUSTUS transcript 4108506 4109025 0.43 - . g862.t1 Scaffold_1 AUGUSTUS stop_codon 4108506 4108508 . - 0 transcript_id "g862.t1"; gene_id "g862"; Scaffold_1 AUGUSTUS CDS 4108506 4108937 0.43 - 0 transcript_id "g862.t1"; gene_id "g862"; Scaffold_1 AUGUSTUS CDS 4109023 4109025 0.8 - 0 transcript_id "g862.t1"; gene_id "g862"; Scaffold_1 AUGUSTUS start_codon 4109023 4109025 . - 0 transcript_id "g862.t1"; gene_id "g862"; # protein sequence = [MAGYRHVYISRKFAQENGFIPDDAAPGLYGYSGLVNIGTWPISLTPSTVPSSLPDAPPAHASISSKRPKQTKDNSKGP # KPTLMTVYLSEEPHFDVVLGRSFIERRQIRLTSVDPTDVVCLDTGEKIECELVILKDGRGEIVTVT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g862 ### # start gene g863 Scaffold_1 AUGUSTUS gene 4116660 4117187 0.86 - . g863 Scaffold_1 AUGUSTUS transcript 4116660 4117187 0.86 - . g863.t1 Scaffold_1 AUGUSTUS stop_codon 4116660 4116662 . - 0 transcript_id "g863.t1"; gene_id "g863"; Scaffold_1 AUGUSTUS CDS 4116660 4117187 0.86 - 0 transcript_id "g863.t1"; gene_id "g863"; Scaffold_1 AUGUSTUS start_codon 4117185 4117187 . - 0 transcript_id "g863.t1"; gene_id "g863"; # protein sequence = [MRSVKPFAETKIGSFSGGPVDCCRLLEFDEVGPFVDEHHFNRHLRGPLEGPSISPAVLSSQQRQHELCATHNDLFPRN # IMVDDQLNIVAIVDWKSAGWFPVHWEYCMCRNWTYNEVDQDWKKWVSEFLDPWIEEETADRDLLRTYPNFMVYWSTRVNPDSKDGYELYKYLRSSPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g863 ### # start gene g864 Scaffold_1 AUGUSTUS gene 4118265 4119093 0.37 + . g864 Scaffold_1 AUGUSTUS transcript 4118265 4119093 0.37 + . g864.t1 Scaffold_1 AUGUSTUS start_codon 4118265 4118267 . + 0 transcript_id "g864.t1"; gene_id "g864"; Scaffold_1 AUGUSTUS CDS 4118265 4118297 0.41 + 0 transcript_id "g864.t1"; gene_id "g864"; Scaffold_1 AUGUSTUS CDS 4118392 4119093 0.88 + 0 transcript_id "g864.t1"; gene_id "g864"; Scaffold_1 AUGUSTUS stop_codon 4119091 4119093 . + 0 transcript_id "g864.t1"; gene_id "g864"; # protein sequence = [MGQNQYSPMLQATTFQGLSSAPSSLPQMGASLPNSHPVSGASQPIPTPPSSASQPAQILPSPQLSQQPQVQVPPGTQS # QTPSASAPYLQAQPLPPSSSQHLIASSSLHQTPASQSNLGSSNMRQPSSFPASIQQNIEPQPLFPYIQSAEPMQMYRNSQTSPEGPSLPPPPPSCRPY # TSMQASTGATDGYGQLVGLQGHSRVTTAPGFPGLTAIQRTNHTRLDHASQSLPQNPRREGCSPTCPCP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g864 ### # start gene g865 Scaffold_1 AUGUSTUS gene 4135298 4135651 0.73 - . g865 Scaffold_1 AUGUSTUS transcript 4135298 4135651 0.73 - . g865.t1 Scaffold_1 AUGUSTUS stop_codon 4135298 4135300 . - 0 transcript_id "g865.t1"; gene_id "g865"; Scaffold_1 AUGUSTUS CDS 4135298 4135651 0.73 - 0 transcript_id "g865.t1"; gene_id "g865"; Scaffold_1 AUGUSTUS start_codon 4135649 4135651 . - 0 transcript_id "g865.t1"; gene_id "g865"; # protein sequence = [MNLWLNIPSLTNLKLRIQAIVVVARPRRITAGQTPVDFSVEIVDAGGGQFETYRMCYSDGTEESLKDILKNHLGWNIG # TFKVATKDFEDAENLPQLYDWNPQTISNYADIPPAAPGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g865 ### # start gene g866 Scaffold_1 AUGUSTUS gene 4141636 4142802 0.86 + . g866 Scaffold_1 AUGUSTUS transcript 4141636 4142802 0.86 + . g866.t1 Scaffold_1 AUGUSTUS start_codon 4141636 4141638 . + 0 transcript_id "g866.t1"; gene_id "g866"; Scaffold_1 AUGUSTUS CDS 4141636 4142802 0.86 + 0 transcript_id "g866.t1"; gene_id "g866"; Scaffold_1 AUGUSTUS stop_codon 4142800 4142802 . + 0 transcript_id "g866.t1"; gene_id "g866"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g866 ### # start gene g867 Scaffold_1 AUGUSTUS gene 4142853 4144808 0.89 + . g867 Scaffold_1 AUGUSTUS transcript 4142853 4144808 0.89 + . g867.t1 Scaffold_1 AUGUSTUS start_codon 4142853 4142855 . + 0 transcript_id "g867.t1"; gene_id "g867"; Scaffold_1 AUGUSTUS CDS 4142853 4144808 0.89 + 0 transcript_id "g867.t1"; gene_id "g867"; Scaffold_1 AUGUSTUS stop_codon 4144806 4144808 . + 0 transcript_id "g867.t1"; gene_id "g867"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSKRSRGTPTN # GTGSINRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPANGTTKSTIEKCLLSLKH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g867 ### # start gene g868 Scaffold_1 AUGUSTUS gene 4159361 4159702 0.67 + . g868 Scaffold_1 AUGUSTUS transcript 4159361 4159702 0.67 + . g868.t1 Scaffold_1 AUGUSTUS start_codon 4159361 4159363 . + 0 transcript_id "g868.t1"; gene_id "g868"; Scaffold_1 AUGUSTUS CDS 4159361 4159702 0.67 + 0 transcript_id "g868.t1"; gene_id "g868"; Scaffold_1 AUGUSTUS stop_codon 4159700 4159702 . + 0 transcript_id "g868.t1"; gene_id "g868"; # protein sequence = [MSLTFKLNDGAQIPWLGFGTGTALFNKDSTEAVKVAIQNGVTHLDGAQLYRNEESLGQGIKDSGVPREKALCYDEIGG # NPFSAYHKSYFKRVVEETWFGLCRSVFDTFACLWP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g868 ### # start gene g869 Scaffold_1 AUGUSTUS gene 4161914 4164803 0.08 - . g869 Scaffold_1 AUGUSTUS transcript 4161914 4164803 0.08 - . g869.t1 Scaffold_1 AUGUSTUS stop_codon 4161914 4161916 . - 0 transcript_id "g869.t1"; gene_id "g869"; Scaffold_1 AUGUSTUS CDS 4161914 4163510 0.84 - 1 transcript_id "g869.t1"; gene_id "g869"; Scaffold_1 AUGUSTUS CDS 4163606 4163741 0.13 - 2 transcript_id "g869.t1"; gene_id "g869"; Scaffold_1 AUGUSTUS CDS 4163951 4164803 0.16 - 0 transcript_id "g869.t1"; gene_id "g869"; Scaffold_1 AUGUSTUS start_codon 4164801 4164803 . - 0 transcript_id "g869.t1"; gene_id "g869"; # protein sequence = [MSSSSARSGSSDDRDTTRDTMNSSTSSGNRNRDTVSSVGTNRPSFISSGRSDEVSITRGPQAPPRSPTSPSPLSAQKF # PTSPQPPISPRTPEPRTMSSLSPLSSSFNPATTSTMIASMTTSSSAPSTLTGPLPRPSFLSSTSMPGMNANIRGSGAPMNRGPPVPNAPMSPRLPNSL # LPGRIPFASGSGSIVGPPRTTYSPAPSLNGPPLSPPLPIPASRVHSMSPSIHQPEPDTKIGGEAGMAGVGRRGFAAAARAALFTSNMGGEGPRGMLGG # PFLDIAAAVRNLTFSVPVQFFLLSFFRTVFVFCMSSTSQAISFDSAMLDKTLPRWYNLDTPLTTNSSSPHSPGPVSPVTPFSTSPTSVYPLQASAMDK # GMGADGSFFDKFRDRIPGLGIDSESSSPTDDIPTAKIGVGGGSVTPRAGPSRQNSNASEASTSSSVLSLGLAYSASNASSESKNPRRRTRRSSANSPG # DEDGTLRAVNMAWLMQMIRITKTKKEHDTQSRLSVQSGLSRRTIRKSRDGATPTPGQRSDSLVKARQRPVSGSLYSDDDDDDNDLKNRLRLQSSPPSK # TNLIRVNSNASVSSVSSTSSTSSAAAIAKALGLSRSSVERDPEGYSMGRLVMGGPGAPGVARTPSGSKSINETRRNRSATVSSMRSFRSDGLGRARSG # TEGSVVGSKGDLEQAMKDLMNNMTTGSPPQPVRIGLRDDGPSPVIPPFFDSPPSTRGSKLAHRSNTVGITTPYTSAADAAKLLPKLPARSKTERGSKA # LHASAQQHYATPSIASSSDETGKRKVRICMKCDKRIDDGRWISIENPGGESPGGVGTGGKSERGEKGERKRRSVLCESCWKNMYLPKVSFITCLALF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g869 ### # start gene g870 Scaffold_1 AUGUSTUS gene 4166853 4167188 0.93 - . g870 Scaffold_1 AUGUSTUS transcript 4166853 4167188 0.93 - . g870.t1 Scaffold_1 AUGUSTUS stop_codon 4166853 4166855 . - 0 transcript_id "g870.t1"; gene_id "g870"; Scaffold_1 AUGUSTUS CDS 4166853 4167188 0.93 - 0 transcript_id "g870.t1"; gene_id "g870"; Scaffold_1 AUGUSTUS start_codon 4167186 4167188 . - 0 transcript_id "g870.t1"; gene_id "g870"; # protein sequence = [MENRTCFAAFKMLPIDPTRVRRGSSYGSTIEYSQAADELTGAANCKEAVDLVVDVIRRACEDVGSAATESRSGADQFV # VEEDVVGLADAQKMTSMYAKMEYGVKRLLWLGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g870 ### # start gene g871 Scaffold_1 AUGUSTUS gene 4170023 4171165 0.32 - . g871 Scaffold_1 AUGUSTUS transcript 4170023 4171165 0.32 - . g871.t1 Scaffold_1 AUGUSTUS stop_codon 4170023 4170025 . - 0 transcript_id "g871.t1"; gene_id "g871"; Scaffold_1 AUGUSTUS CDS 4170023 4170531 0.74 - 2 transcript_id "g871.t1"; gene_id "g871"; Scaffold_1 AUGUSTUS CDS 4170841 4171165 0.59 - 0 transcript_id "g871.t1"; gene_id "g871"; Scaffold_1 AUGUSTUS start_codon 4171163 4171165 . - 0 transcript_id "g871.t1"; gene_id "g871"; # protein sequence = [MKRLFSKSGAKPPAKSLSTSTSVPVTAKTTAPHTTGLQPKDIVPPVPHPYPYDSIALLVSEDGLLLRPNLSEPDAALG # CVRVAWGKGGQIEELSGGSGKVYDWKESDNQNGLSRPTLQSTITIDTISSSAENGPTDHDELVASTASFPRVQFSEPEINRDKAFAESGLNSAQSSIH # SPSDSTSELSLSGSSTPSVADPQNPSAPIAKILASRLSFWSRLSKRGSLFPTSPDQDNLPTIEKKVPKPLTLSLHAMNEEEDPEEVIEGILSATRAST # RNC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g871 ### # start gene g872 Scaffold_1 AUGUSTUS gene 4175818 4176760 0.83 + . g872 Scaffold_1 AUGUSTUS transcript 4175818 4176760 0.83 + . g872.t1 Scaffold_1 AUGUSTUS start_codon 4175818 4175820 . + 0 transcript_id "g872.t1"; gene_id "g872"; Scaffold_1 AUGUSTUS CDS 4175818 4175838 0.91 + 0 transcript_id "g872.t1"; gene_id "g872"; Scaffold_1 AUGUSTUS CDS 4176263 4176760 0.94 + 0 transcript_id "g872.t1"; gene_id "g872"; Scaffold_1 AUGUSTUS stop_codon 4176758 4176760 . + 0 transcript_id "g872.t1"; gene_id "g872"; # protein sequence = [MPFLTLLNFENPRVAQSETIVLTSDPTRTASLTRHTSRVTETQTSSPDTRTLKSKRFLEEVAHGLSNAAGSIQNTTDH # FEDVKHKYTQPFADAGAAMHNATSDVKEGFENLGDGVKNGTENLTNGVKNSVEGAAGKMKNGTESVVNGVEDGAKGALAGGKAGWNNAGPDSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g872 ### # start gene g873 Scaffold_1 AUGUSTUS gene 4179170 4181326 0.52 + . g873 Scaffold_1 AUGUSTUS transcript 4179170 4181326 0.52 + . g873.t1 Scaffold_1 AUGUSTUS start_codon 4179170 4179172 . + 0 transcript_id "g873.t1"; gene_id "g873"; Scaffold_1 AUGUSTUS CDS 4179170 4181326 0.52 + 0 transcript_id "g873.t1"; gene_id "g873"; Scaffold_1 AUGUSTUS stop_codon 4181324 4181326 . + 0 transcript_id "g873.t1"; gene_id "g873"; # protein sequence = [MERRIRVYKRRQAKAAGNSQEPSGDTTEEEEPEPNALRTLKRKVTPVAESRTQVKRLKKEEVHSSLLANNGFVRVSQL # VRRRPAVAGDKGEGPSRIAGPSTMQPKPQPIINKPKTPTILQKPKASPRPQKKVAPEEQIMVYPNLPASDDYSGQQFEAKVDLKTPTIPQKPHASPHR # SQKKVVPEEQIMIHPDLPASDDYSGQLFEGGSDAEMQLDPEAGQEDDNDDMEVNHILTDPVEPDSDKTNAYASTFFPHTLILIPSTFYSTHSYLTPRS # KKQLTAGTSTSDRNRVPRGSSDGMTTTADSGFFESTTPPPPFPRYITNPSNNIFDGFSDTDSPPRPLKARPVPKLIEGPFGGARHKHPVRRIVFSSPE # SDSIKTPVKGAWPPVRGTKRKLPITPEVNITAPLSSSKSGHVPSSSRPSGSSKFSPPLPSTRSPLIQLSQKGEEHQLVAEDENQPSGSNPRVSEQSAR # QDDELQEEEVEEEKEPLFTQRIPSRDTDSHEEEEEEEPLFTQRIPFREVVNHEEEEEEPLFTQRIPFREADGHEEEEEEPLFTQRIPSREADSQEEEE # EEEPLFTQRIPSREADSQEEEEEEPLFTQRIPSREVDSHEEDEEEEPLFTQRIPSREVDSHEEDEEEEPLFTQRIPSREADSQEEEEEEEPLFTQRIP # SRKADTQEEQEEEEPLFTQRMPREGENDSQEEEGDGSEEEREGKYLKLMTQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g873 ### # start gene g874 Scaffold_1 AUGUSTUS gene 4181584 4182899 0.5 + . g874 Scaffold_1 AUGUSTUS transcript 4181584 4182899 0.5 + . g874.t1 Scaffold_1 AUGUSTUS start_codon 4181584 4181586 . + 0 transcript_id "g874.t1"; gene_id "g874"; Scaffold_1 AUGUSTUS CDS 4181584 4181927 0.51 + 0 transcript_id "g874.t1"; gene_id "g874"; Scaffold_1 AUGUSTUS CDS 4182047 4182899 0.83 + 1 transcript_id "g874.t1"; gene_id "g874"; Scaffold_1 AUGUSTUS stop_codon 4182897 4182899 . + 0 transcript_id "g874.t1"; gene_id "g874"; # protein sequence = [MPDIQHPQSHPSVPLAIGTPQSDRSDDIARPSVSNETAESVVRALNAFILEMDRSRKTIERDRLTRAERAKKEAERMA # TQDLTSSEQSLNGAGSQFLRFRERRSKRVSSAPGGLRSAKKNLGKLAANEFPVQIARPSAQSEPTASGSGLKLAIRNADIDPNVVRDSANSHSSSFRD # PGQSTSRNKGKNRVIEEIEVKSSNHRDSTPSTVSTVRSKQIDLRQLERAQSRRRSSLPTAGRNTSGPVSGFSASSPAAPTISITPTTGRPFLSASFSN # SRRVAHSPPPHSPLKLSSSDQSRLIDQTIQDMAEEYQFPPDYVRRVWKETGDLNEAAAILRKLRDMAGTLLRKASARRSSGFGAASDNERSRGVPPES # IPATDINTYSRDRFRSPNRFHHPDSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g874 ### # start gene g875 Scaffold_1 AUGUSTUS gene 4185569 4186318 0.41 - . g875 Scaffold_1 AUGUSTUS transcript 4185569 4186318 0.41 - . g875.t1 Scaffold_1 AUGUSTUS stop_codon 4185569 4185571 . - 0 transcript_id "g875.t1"; gene_id "g875"; Scaffold_1 AUGUSTUS CDS 4185569 4186318 0.41 - 0 transcript_id "g875.t1"; gene_id "g875"; Scaffold_1 AUGUSTUS start_codon 4186316 4186318 . - 0 transcript_id "g875.t1"; gene_id "g875"; # protein sequence = [MALLYEAIQTPVMPLEAPVLNPTGGVKGRQQAVLDYKPDPTRPGTGVFVAHGQIDSDPPMATAVPTSTQSTTSAGPIV # NFTPLTGAAIGSGVSNVNPAMNVQAGTNDRIINTLDTPATVENLAEFAVTDTGFLEGMPNLMFDWGKYCSFVAKVNSNDTDFGRFVLFTHQVNGIASS # LDLMAPQMGQCRPSHRPRLNNMTAFFPIMLSSVSSKKNPTSSWCINICMLIRYSRSVFHFENVVFGLQNFTFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g875 ### # start gene g876 Scaffold_1 AUGUSTUS gene 4187256 4187957 0.21 - . g876 Scaffold_1 AUGUSTUS transcript 4187256 4187957 0.21 - . g876.t1 Scaffold_1 AUGUSTUS stop_codon 4187256 4187258 . - 0 transcript_id "g876.t1"; gene_id "g876"; Scaffold_1 AUGUSTUS CDS 4187256 4187957 0.21 - 0 transcript_id "g876.t1"; gene_id "g876"; Scaffold_1 AUGUSTUS start_codon 4187955 4187957 . - 0 transcript_id "g876.t1"; gene_id "g876"; # protein sequence = [MAGVTSPTHLLHSQATISSRVYQGYDARYNHTFEVSKTGDGLISVQKPSNEEQQTKPVEYRVERNLIEQLINAYFTDV # APLLPVVTQVEFLAHSSPPPILLYSMCLVAAARRDVPQQVFDSIRYTVNSIIKAEDVLSTASIVNVQALLILCMTGDCHSPFVPTALSALWIRLGTAI # RMVIVLIQPTRVVSYGNFKAQDLGLHRCESVQQNVELRRRLWGACLISDRWYLFFSY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g876 ### # start gene g877 Scaffold_1 AUGUSTUS gene 4188411 4189150 0.59 - . g877 Scaffold_1 AUGUSTUS transcript 4188411 4189150 0.59 - . g877.t1 Scaffold_1 AUGUSTUS stop_codon 4188411 4188413 . - 0 transcript_id "g877.t1"; gene_id "g877"; Scaffold_1 AUGUSTUS CDS 4188411 4188892 0.59 - 2 transcript_id "g877.t1"; gene_id "g877"; Scaffold_1 AUGUSTUS CDS 4188979 4189150 0.74 - 0 transcript_id "g877.t1"; gene_id "g877"; Scaffold_1 AUGUSTUS start_codon 4189148 4189150 . - 0 transcript_id "g877.t1"; gene_id "g877"; # protein sequence = [MQTNTKSGSETPPGNKSKSTSSPPLLPSVPPAAPPQNPKPSSSTKKSRQRKPSADVQHPPPQPAVAQGPVLQPYPGPP # YYMNHPYPINGPPYQQPQHPGYPPPPQSTSTPGAPPPPHYAYPMAASPHPYYTYQYPPPQPMMVYGAPPPPQPPPAEIAQANSPPPQTPTTSSSGAKR # KRKSAKEKAASDDEAASGQDGSRTQGQSQIDPKKRTKTVSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g877 ### # start gene g878 Scaffold_1 AUGUSTUS gene 4191516 4192855 0.62 - . g878 Scaffold_1 AUGUSTUS transcript 4191516 4192855 0.62 - . g878.t1 Scaffold_1 AUGUSTUS stop_codon 4191516 4191518 . - 0 transcript_id "g878.t1"; gene_id "g878"; Scaffold_1 AUGUSTUS CDS 4191516 4191644 0.86 - 0 transcript_id "g878.t1"; gene_id "g878"; Scaffold_1 AUGUSTUS CDS 4191701 4192855 0.62 - 0 transcript_id "g878.t1"; gene_id "g878"; Scaffold_1 AUGUSTUS start_codon 4192853 4192855 . - 0 transcript_id "g878.t1"; gene_id "g878"; # protein sequence = [MSTPSSANSQSVTPNPSIIPASAVKLRSPGSPLSSTFPVSTFTSPQTHPMHTGSTHAGGVQPSASFFHPSRPHYSPPD # SPSSSHMHAREDKDVFQLSELKRLSDSTADHSDFVGGDTSDLSMQEQQIMKGVKQSREPLLPFGEGPPVAIRTSMAKDRSDTSYTVKPQLPHSRIGLR # TSLDLVFNLRRGLSIDSHKSASTPSPAAQSHRRQVHSVSSEGGFGSIGDKRKLHDEERGYPTTHFASLRRQHSIASSHDPSSFATTSKFPQSAPIPTG # YKPTGSKNGQSSDEKTQFLFAVPMYTPHGKIIRKWQLHPSRNKFFLNGRMLTGGDSPWAFIASFSVLCAIAGIWFGTTCRWWWLQEGAGGKVLVCVAG # YLTLIVITSMLKTAFTDPGILPRNLDPDPPYPSTSPSDGGVRAPMPRDLKVRADM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g878 ### # start gene g879 Scaffold_1 AUGUSTUS gene 4198992 4199714 0.97 + . g879 Scaffold_1 AUGUSTUS transcript 4198992 4199714 0.97 + . g879.t1 Scaffold_1 AUGUSTUS start_codon 4198992 4198994 . + 0 transcript_id "g879.t1"; gene_id "g879"; Scaffold_1 AUGUSTUS CDS 4198992 4198997 0.97 + 0 transcript_id "g879.t1"; gene_id "g879"; Scaffold_1 AUGUSTUS CDS 4199049 4199714 0.98 + 0 transcript_id "g879.t1"; gene_id "g879"; Scaffold_1 AUGUSTUS stop_codon 4199712 4199714 . + 0 transcript_id "g879.t1"; gene_id "g879"; # protein sequence = [MDIWEANSISAAVTPHPCTVTEQTSCTGTTCSSPNSTAGVCDQAGCDFNSYRLGDTTFYGPGMTVDTTKPFTVVTQFI # SSNNETTGTLSAIRRLYVQNGVVIQNSETNIPGITTTNEIDATFCEQQKTAFGDTDTFDSKGGLSGMGDALSAGVVLVLSLWDDYAVNMLWLDSTYPT # DGTTAGDFRGTCPTTSGVPATVEAASPNAQVIYSNIKFGAIGSTFST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g879 ### # start gene g880 Scaffold_1 AUGUSTUS gene 4204642 4205514 0.5 - . g880 Scaffold_1 AUGUSTUS transcript 4204642 4205514 0.5 - . g880.t1 Scaffold_1 AUGUSTUS stop_codon 4204642 4204644 . - 0 transcript_id "g880.t1"; gene_id "g880"; Scaffold_1 AUGUSTUS CDS 4204642 4205514 0.5 - 0 transcript_id "g880.t1"; gene_id "g880"; Scaffold_1 AUGUSTUS start_codon 4205512 4205514 . - 0 transcript_id "g880.t1"; gene_id "g880"; # protein sequence = [MDKISEIMVTNQSAQVQELCRSVLLQFLLDYPQGKGRLRNQMTFFTKNLSYEYESGRKSVLELLGAIVTKFQTGLIQE # FSDLLFVALVMTIANDDSSKCREMAAHLINALFVRLDERKRSEMMSHLHTWCSQHNQPPLVRVTAQVYGLVVDALQNEIVPFIPTILKNLRSSLEHSA # AQLENFDDDSMAVDLEWQLPYHSLTTLAKLAKVFPELILQSKDVDWSSIANHLLFPHSWVRTASSRLLGTFFSSATIQTPSASDLNAPFSPLSSEGMK # TVAQKLCQQLKSEHLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g880 ### # start gene g881 Scaffold_1 AUGUSTUS gene 4206972 4208917 0.23 - . g881 Scaffold_1 AUGUSTUS transcript 4206972 4208917 0.23 - . g881.t1 Scaffold_1 AUGUSTUS stop_codon 4206972 4206974 . - 0 transcript_id "g881.t1"; gene_id "g881"; Scaffold_1 AUGUSTUS CDS 4206972 4206987 0.35 - 1 transcript_id "g881.t1"; gene_id "g881"; Scaffold_1 AUGUSTUS CDS 4207113 4208917 0.25 - 0 transcript_id "g881.t1"; gene_id "g881"; Scaffold_1 AUGUSTUS start_codon 4208915 4208917 . - 0 transcript_id "g881.t1"; gene_id "g881"; # protein sequence = [MLEKKGRSRGADRRSAVLTTLAGCTNDELALLIDLMLRPLTEGQGLKQGAIIQRTSTEALDRQLVGFLTLLGDVLKNL # GSRITKYWDALLGTTIDIIAKSQSRIDGDDTEAEVEDMEEDDTSLPTTKIIRSIRQLGLKRLADFFRCRVEFDFSPYMKAAFTAFITPRIPLLDRENT # QAPSALLELFYVWTLDSEQIHFLVEYDRQVIPKIFSCLTATNVKPAVISRIFDIVDRLIAFSADDEEILGNILRPNVSLLLSSLSVLVQQSKNITSIS # TLLGQRQIGILSQVAQYSSDAEEAITLLKLFSPLLRKPPKVVSEKIKSDLLNILGHQMRLIPDLHDITSEVYQQLYELLSMLFQSLRSRQARINLVSA # FHDLANLQTSLQDLAQLMDELNAYSTKRIDEPDFERRLAAFAYLNDTFYRSLSISDWLPVLYNMLSFIQDPEELSIRNHASFSMRHFVDLVAAQTSVE # HDRAFSRVLFPGLKNGLRSKKEMVRAEVVAVIAYAVEKCENNISLQDMRILLANGDEEANFFNNIHHVQLHRRSRALRRLADQCDEQPLRNSTLTEIL # IPLISNYIVETASLDHHLVNDSINTTGRLAKHLSKRFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g881 ### # start gene g882 Scaffold_1 AUGUSTUS gene 4218443 4218847 0.69 + . g882 Scaffold_1 AUGUSTUS transcript 4218443 4218847 0.69 + . g882.t1 Scaffold_1 AUGUSTUS start_codon 4218443 4218445 . + 0 transcript_id "g882.t1"; gene_id "g882"; Scaffold_1 AUGUSTUS CDS 4218443 4218847 0.69 + 0 transcript_id "g882.t1"; gene_id "g882"; Scaffold_1 AUGUSTUS stop_codon 4218845 4218847 . + 0 transcript_id "g882.t1"; gene_id "g882"; # protein sequence = [MLLFFLQGVKPLHPKASFNFVELLKQTLAATAAAVASEGAKEEVLVAVQSSEAFEEATLGPPVIPASSTSPALQLGVP # EVADTPTPSSSANNPRKRKAKSASKRSKKRKLEKEALKEPELPKQHVLKYYRTALR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g882 ### # start gene g883 Scaffold_1 AUGUSTUS gene 4228083 4230109 0.16 - . g883 Scaffold_1 AUGUSTUS transcript 4228083 4230109 0.16 - . g883.t1 Scaffold_1 AUGUSTUS stop_codon 4228083 4228085 . - 0 transcript_id "g883.t1"; gene_id "g883"; Scaffold_1 AUGUSTUS CDS 4228083 4229003 0.37 - 0 transcript_id "g883.t1"; gene_id "g883"; Scaffold_1 AUGUSTUS CDS 4229057 4230109 0.25 - 0 transcript_id "g883.t1"; gene_id "g883"; Scaffold_1 AUGUSTUS start_codon 4230107 4230109 . - 0 transcript_id "g883.t1"; gene_id "g883"; # protein sequence = [MSEGIFAGGKISKEGVTADPAKLTAIVEWKQPADALNLASFVGLTGHFRDLIRNYARIEGPLRNLLKSVPLPQNYTKS # TYRRAMESFRLEGKWTLDHTKAFCLKQALVSEPVLKAPRWDGSSFVVTTDGCKEGFAAVVAQRFEVVHPNGTTTYKMHPVGFASKRTSASEQNYKPFL # LEFAALKFGLDKFSDMIWGFPVEIETDCQALRDVIADDKLNAAHCRWRDGVLAHHIVDVRHIPGKLNVVADGLSRMWEGQDRVVGDGSEWSVSEDWEA # VTGLVNDVFGVSVGDRVLQDGDATDWKALSDRFVHEPVFTEVVEALRVLESPASDKVKQKAKHKAARYMVENNRLWKKEAIVLAKAQHGEAGHWGRDA # VKLALMDRIWSPKLDESIMEAIVSCPECKNFGSTHLHALLNPITRRHPFELLVGDYLSMSKGKGGYKTIGLYLDTYSQRVWAFKFKVAGSGTTTSGSL # TSLFNGYLPPETFMTDNGTHFANKEVEALCARWGTKQHFTPAYSPWVNGLVEGSNKILLHVLKRLCAPKLGEDSAEFTAMTWDTLPDQWPEHLDEAVR # IINNRILPSVKFSPNELLLGAVVNTRRTPVAEAASVLPRESVAVQAAYVDQQQLDGYNAFVNHAVKRKRVFDRRVLKKEGERSCSKRVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g883 ### # start gene g884 Scaffold_1 AUGUSTUS gene 4232240 4233709 0.47 - . g884 Scaffold_1 AUGUSTUS transcript 4232240 4233709 0.47 - . g884.t1 Scaffold_1 AUGUSTUS stop_codon 4232240 4232242 . - 0 transcript_id "g884.t1"; gene_id "g884"; Scaffold_1 AUGUSTUS CDS 4232240 4233709 0.47 - 0 transcript_id "g884.t1"; gene_id "g884"; Scaffold_1 AUGUSTUS start_codon 4233707 4233709 . - 0 transcript_id "g884.t1"; gene_id "g884"; # protein sequence = [MATQQPLTRFSGDPDDPIQPATFLQDFEVRMTELMTPRADLASRIKPYLERDSRAWDWYTEDLTATERTGPWEAFETK # FHARFPSQKKEKKSAKSYLTSLEGERITHEQIMTTSEDTNQPYHQWWADRLLRLAKGAEIEKTKQSIGAVWKKLPYALKKTVDEEHDNWADFTSAIKA # VKWGVLKVEAEHEASRKVPTDSGTPRTKLAGDFAAARISSPPSPSPMRARPAYAGNIGGRKPRRVFTSLNEARKEVLRRGIAAKVQPNTPEGFAAWKA # ELLEWASRHGVDGALSELTIVPLKPGTEAVCSGECFRCGGTRRIRSSLPQARSHTTGRIGLEGILPERIGRKGSKSQRSARFGAGSHFRRHGRVGKWG # RVSVLSGEQLTPGTMSVVNNVQSVLEESNIIDVYSVHNGNSHISSPFAMDISLRDFEGEQVQVEAMVDDGAMVAAMDSAVYDKLKNAIGGWEPTQRKF # RMANGVWCQGRHVGRAVSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g884 ### # start gene g885 Scaffold_1 AUGUSTUS gene 4238182 4238388 0.58 - . g885 Scaffold_1 AUGUSTUS transcript 4238182 4238388 0.58 - . g885.t1 Scaffold_1 AUGUSTUS stop_codon 4238182 4238184 . - 0 transcript_id "g885.t1"; gene_id "g885"; Scaffold_1 AUGUSTUS CDS 4238182 4238388 0.58 - 0 transcript_id "g885.t1"; gene_id "g885"; Scaffold_1 AUGUSTUS start_codon 4238386 4238388 . - 0 transcript_id "g885.t1"; gene_id "g885"; # protein sequence = [MFGGNRDDDEEDEGDEEDENGLGGGGGGTWDWEGSSVPGGWSHSLHGGHAARKKKNTDERRGEACSLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g885 ### # start gene g886 Scaffold_1 AUGUSTUS gene 4241806 4243178 0.09 - . g886 Scaffold_1 AUGUSTUS transcript 4241806 4243178 0.09 - . g886.t1 Scaffold_1 AUGUSTUS stop_codon 4241806 4241808 . - 0 transcript_id "g886.t1"; gene_id "g886"; Scaffold_1 AUGUSTUS CDS 4241806 4242333 0.4 - 0 transcript_id "g886.t1"; gene_id "g886"; Scaffold_1 AUGUSTUS CDS 4242738 4243178 0.26 - 0 transcript_id "g886.t1"; gene_id "g886"; Scaffold_1 AUGUSTUS start_codon 4243176 4243178 . - 0 transcript_id "g886.t1"; gene_id "g886"; # protein sequence = [MFQLFTFSASATPAVSSSPSSSAPSTSAIVTSTSVAPSSAEAIASVSSTASTTVSAPASTGTTILDPAAVAQAQVRDD # TATRAFSAAEIQTSDGQCLSVDANSGDFRENLIPITAQACDGSAGQQWDVITSGVHNNVNSTALIVSTLLFSISASGASVVSSSPATATPSISAIVSS # ASAAPSSVEIIASASSIASASTTASTIVSAPASTGTTVLDPASVAQAQVRDDTATRAFSAAEIQTSDGQCLSVDATSGDFRENLIPITTQTCDGSAGQ # QWDVITAGVHNNVPGTALFVSTLVCAKSKHFRTFVTNRRNCCSRFKDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g886 ### # start gene g887 Scaffold_1 AUGUSTUS gene 4243557 4244018 0.33 - . g887 Scaffold_1 AUGUSTUS transcript 4243557 4244018 0.33 - . g887.t1 Scaffold_1 AUGUSTUS stop_codon 4243557 4243559 . - 0 transcript_id "g887.t1"; gene_id "g887"; Scaffold_1 AUGUSTUS CDS 4243557 4244018 0.33 - 0 transcript_id "g887.t1"; gene_id "g887"; Scaffold_1 AUGUSTUS start_codon 4244016 4244018 . - 0 transcript_id "g887.t1"; gene_id "g887"; # protein sequence = [MFQQLFTISASGSQPATASNPSSTATETPSSVASSSSVAVSSGVEAAATSSTASAPASTGTTVLDPAAVAQAQVRDDT # ATRAFSAAEIQTSDGQCLSVDANSGDFRENLIPITVQACDGSSGQQWDVITSGVHNNVNGTALIVSTLVRIARII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g887 ### # start gene g888 Scaffold_1 AUGUSTUS gene 4248554 4249301 0.27 + . g888 Scaffold_1 AUGUSTUS transcript 4248554 4249301 0.27 + . g888.t1 Scaffold_1 AUGUSTUS start_codon 4248554 4248556 . + 0 transcript_id "g888.t1"; gene_id "g888"; Scaffold_1 AUGUSTUS CDS 4248554 4248615 0.39 + 0 transcript_id "g888.t1"; gene_id "g888"; Scaffold_1 AUGUSTUS CDS 4248659 4249301 0.39 + 1 transcript_id "g888.t1"; gene_id "g888"; Scaffold_1 AUGUSTUS stop_codon 4249299 4249301 . + 0 transcript_id "g888.t1"; gene_id "g888"; # protein sequence = [MIKHFERIPPLYTEDGKLVDLKPNTANDPNGFYSSDFYVDNLIKYLSERPTDKPFFAFLPFAAPHWPLQVDKLYRDRY # KGVYNDGPEALRLRRLARLKDLGLIAQDVIPHEVVAPPETEWSTLTDEERELSARAMETFAGMVEKMDENIGKLLKYLERIGEADNTFIIFQSDNGAE # GASYEAAPTMGNSIMDVVNRFYDNSIENIGEHNSFVWYGPRWAQAATGTDRLFLRASC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g888 ### # start gene g889 Scaffold_1 AUGUSTUS gene 4249435 4249944 0.6 + . g889 Scaffold_1 AUGUSTUS transcript 4249435 4249944 0.6 + . g889.t1 Scaffold_1 AUGUSTUS start_codon 4249435 4249437 . + 0 transcript_id "g889.t1"; gene_id "g889"; Scaffold_1 AUGUSTUS CDS 4249435 4249944 0.6 + 0 transcript_id "g889.t1"; gene_id "g889"; Scaffold_1 AUGUSTUS stop_codon 4249942 4249944 . + 0 transcript_id "g889.t1"; gene_id "g889"; # protein sequence = [MDVMPTILDLAGVQHPGKFFRGRDVEEMRGKSWINFFENEKQSENATTEIHSTDDPAVGWELFGRAALRKENWKIVYM # TPWSYGKGDWELFDLSKDPGETRDLSEKEPAKLKELLELWEKYVEKNGVVWGSPVSEVEVKVPGLERKDVIGGDPLDDTRAWMPHRGHCKD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g889 ### # start gene g890 Scaffold_1 AUGUSTUS gene 4258019 4258510 0.99 - . g890 Scaffold_1 AUGUSTUS transcript 4258019 4258510 0.99 - . g890.t1 Scaffold_1 AUGUSTUS stop_codon 4258019 4258021 . - 0 transcript_id "g890.t1"; gene_id "g890"; Scaffold_1 AUGUSTUS CDS 4258019 4258510 0.99 - 0 transcript_id "g890.t1"; gene_id "g890"; Scaffold_1 AUGUSTUS start_codon 4258508 4258510 . - 0 transcript_id "g890.t1"; gene_id "g890"; # protein sequence = [MVRDHPHVVASQPFEYVSSFPGPITANVVQRIKVKEIRSAYNVEQVFSMDIPALQHENDGLIYTCVNTPYSPGTDSNV # WVIITSCIAFKILTCYIRIKWKPPTENSIDFKLVLRFPPLPSSPTQPDFAAKPKFLLHVWCGDQNGTPRYEQYDEMYVDEDEWEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g890 ### # start gene g891 Scaffold_1 AUGUSTUS gene 4274013 4275127 0.93 + . g891 Scaffold_1 AUGUSTUS transcript 4274013 4275127 0.93 + . g891.t1 Scaffold_1 AUGUSTUS start_codon 4274013 4274015 . + 0 transcript_id "g891.t1"; gene_id "g891"; Scaffold_1 AUGUSTUS CDS 4274013 4274433 0.93 + 0 transcript_id "g891.t1"; gene_id "g891"; Scaffold_1 AUGUSTUS CDS 4274493 4275127 1 + 2 transcript_id "g891.t1"; gene_id "g891"; Scaffold_1 AUGUSTUS stop_codon 4275125 4275127 . + 0 transcript_id "g891.t1"; gene_id "g891"; # protein sequence = [MKRTIPTTSITPTGWSDLCAASGIHDISITDLCFDLGQDGWEYALSAVADACVQQNIADEMISFAKIPGILNSDDIIS # YAIAYRQQPREAVSVLGVVPSTLYCMIPPVNPELSNIVNVQPAGVNPGLFGSPSAPVVPFGSDGTCPYGSTPDVSVCACATINGTTGASSVPIPVPAN # TTNSTLTGANSTLAGSDLTNGTGVNATSTSTSSAATLNGTDTTNSPLTGSGSTGTDSTLTGSDSTNGTDITNSTLTGSDSTNGTDTTNSTLTGSDSTN # STDSADSSTLTFSSSGATSTGISATVSIDTATASATATLITSTDSTDASITSTASANASTGTSGVTFDGNIHDPAGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g891 ### # start gene g892 Scaffold_1 AUGUSTUS gene 4275540 4276434 0.82 - . g892 Scaffold_1 AUGUSTUS transcript 4275540 4276434 0.82 - . g892.t1 Scaffold_1 AUGUSTUS stop_codon 4275540 4275542 . - 0 transcript_id "g892.t1"; gene_id "g892"; Scaffold_1 AUGUSTUS CDS 4275540 4275914 0.93 - 0 transcript_id "g892.t1"; gene_id "g892"; Scaffold_1 AUGUSTUS CDS 4275977 4276017 0.85 - 2 transcript_id "g892.t1"; gene_id "g892"; Scaffold_1 AUGUSTUS CDS 4276107 4276434 0.83 - 0 transcript_id "g892.t1"; gene_id "g892"; Scaffold_1 AUGUSTUS start_codon 4276432 4276434 . - 0 transcript_id "g892.t1"; gene_id "g892"; # protein sequence = [MLALKRRFQLGAKHHRHDFDQDLDSDVDEEGNTTLPRRPRHLSSAEVYGVMASHAEWFLAQQLATSHTSHTYVNLKSW # YNFCLKLEQAKPEKRRLQRETQSWKNGDGVTLPGGWETRIERRCINYEFPDVFDDEGYPGVEQVSEYDDAHGRPIYDSDMSLEDAPAPPDSDSDSDSD # IDVQWVKTIPRWLMDAPVIHPGQVKWCCPDRDCEYSLDLLELPKSTRFSGPEHDFLRDESYESFIFRPKVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g892 ### # start gene g893 Scaffold_1 AUGUSTUS gene 4277874 4279019 1 + . g893 Scaffold_1 AUGUSTUS transcript 4277874 4279019 1 + . g893.t1 Scaffold_1 AUGUSTUS start_codon 4277874 4277876 . + 0 transcript_id "g893.t1"; gene_id "g893"; Scaffold_1 AUGUSTUS CDS 4277874 4279019 1 + 0 transcript_id "g893.t1"; gene_id "g893"; Scaffold_1 AUGUSTUS stop_codon 4279017 4279019 . + 0 transcript_id "g893.t1"; gene_id "g893"; # protein sequence = [MQQRAGPSSNFGQSNRKGSIGSLASFSSLEPLNTSRLQAFNPNQPKNLPSLESVPSVFFQSDFDLGNPQTFALITDQD # QFGEGDPTVIAHSVPLLERFSHYADTVELHLSNEIAARAPSFFAALTNLHTLQSESTATLSQISRLRQMLEQVDETVAKKGMEVISLEKRVQGVEEIE # RSVEGVKDVVKFTGEAREKVGKGMYGDALVILSVLDDMWNDALPTQSSLPKQPSGRLSSLPPTPEGEEADSESPPPGYSTSPVSLTPSTSKIKLLPSL # GIPLSQLNAFSALPSHLRSLTLEIASSLSDELVSILRDDLLWRIGNGGSIATGSGKETVSEETKNQLTELLVGLIKTRGLKEATLSYREIVFDEFRGL # TRKVRASYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g893 ### # start gene g894 Scaffold_1 AUGUSTUS gene 4279250 4279663 0.52 + . g894 Scaffold_1 AUGUSTUS transcript 4279250 4279663 0.52 + . g894.t1 Scaffold_1 AUGUSTUS start_codon 4279250 4279252 . + 0 transcript_id "g894.t1"; gene_id "g894"; Scaffold_1 AUGUSTUS CDS 4279250 4279663 0.52 + 0 transcript_id "g894.t1"; gene_id "g894"; Scaffold_1 AUGUSTUS stop_codon 4279661 4279663 . + 0 transcript_id "g894.t1"; gene_id "g894"; # protein sequence = [MLSGVEGLHVQIALLGEISESIEATERATKAARQGKSIPAPTPLSSESPSSGDSTSVTSLLLAELTDTLSSATELAHT # QAAQLLSSRSEIHAGLSLPEFVELFNDTWKFVVRSEVVCRRMIVGLRGAVVSQVREIHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g894 ### # start gene g895 Scaffold_1 AUGUSTUS gene 4286050 4287439 0.32 + . g895 Scaffold_1 AUGUSTUS transcript 4286050 4287439 0.32 + . g895.t1 Scaffold_1 AUGUSTUS start_codon 4286050 4286052 . + 0 transcript_id "g895.t1"; gene_id "g895"; Scaffold_1 AUGUSTUS CDS 4286050 4286099 0.71 + 0 transcript_id "g895.t1"; gene_id "g895"; Scaffold_1 AUGUSTUS CDS 4286164 4287439 0.52 + 1 transcript_id "g895.t1"; gene_id "g895"; Scaffold_1 AUGUSTUS stop_codon 4287437 4287439 . + 0 transcript_id "g895.t1"; gene_id "g895"; # protein sequence = [MFEEICLTCGKHLSDDGRVYCSDECQNIDTASPSISSASSALSSPRFGYAIGGEVPALVSSALGKALRGYHTRDHHSI # SSSASSTSCSVLTDEEDEDSHFVSGSEGAYQDEYAEGKSKILRPLPGITSTSFLCSTTFWYKQRTRAPHVLGRVPTSASTSGHVYSAPRSAPIHSHSQ # LSTDDETYSDFGSPSRDELESFTSLTTPDEDQNRSTITKAKRTRNRASLPAYFSLLQVSSDAQPRVSLSVSNSSGHSVTRPSPPTPKLTIAGMPIHPF # TAPPAAVMQATPRGRRRDLEASRSTRVSSNDSSSSRSRAENPFAPPATASEAFRSQLSSKGSKSSMEKILDWTAVSGLSRGRATIRRNSSPPPKMVLT # ADTEQFNIVSRGRKADSTSRLRSRGRVMVSELDGVIVNKEAPGFGHGRSGLLHREQAISQRFMSGKPSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g895 ### # start gene g896 Scaffold_1 AUGUSTUS gene 4305954 4306550 0.36 - . g896 Scaffold_1 AUGUSTUS transcript 4305954 4306550 0.36 - . g896.t1 Scaffold_1 AUGUSTUS stop_codon 4305954 4305956 . - 0 transcript_id "g896.t1"; gene_id "g896"; Scaffold_1 AUGUSTUS CDS 4305954 4306550 0.36 - 0 transcript_id "g896.t1"; gene_id "g896"; Scaffold_1 AUGUSTUS start_codon 4306548 4306550 . - 0 transcript_id "g896.t1"; gene_id "g896"; # protein sequence = [MGISGLKMSTVLDFHQQVTTQDRSQQQYGDIWKARGVYPVEKIEDDFAVFSAPLEDGVYPYDREQMLDIIQPLGVPWH # PLKGDKLFISIVMFIGFCWDIDNQWSLLKSSPVKKHHYLNSNLYTALYVILLSYIPTAVHISLLYQTSWLHTVANAKLYQLFPDTCAPYRNQVVARTS # QRPSVLLETANVELPARFKHIR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g896 ### # start gene g897 Scaffold_1 AUGUSTUS gene 4309625 4311415 1 - . g897 Scaffold_1 AUGUSTUS transcript 4309625 4311415 1 - . g897.t1 Scaffold_1 AUGUSTUS stop_codon 4309625 4309627 . - 0 transcript_id "g897.t1"; gene_id "g897"; Scaffold_1 AUGUSTUS CDS 4309625 4311415 1 - 0 transcript_id "g897.t1"; gene_id "g897"; Scaffold_1 AUGUSTUS start_codon 4311413 4311415 . - 0 transcript_id "g897.t1"; gene_id "g897"; # protein sequence = [MEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHSKPFVPTGRYMEERKEIIDKNHPE # GFLWEQERNLMHEMMCKQEAGFAWQPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPLNASYCLKWFCVIKKDGK # SLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYIGYDERELDQLSRDMMTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTECTTQKGP # RWRAESSLRRQWQNPAVDHCGILIISNPTQPRTPPPPPLTQTSPFCRTVRLTTPDLAVLDAVSGAINWENTRMVNRDHYSGLSTTTPVWSCLTKQPSE # SASPGTWQLPAVPHHVHTSMFAPYVAVRTTMQKSVIISPLDHFSQSSIYPTLLFHDFSSAVIEQNPLPNMPAHLAHLYNKIVTPYNADAFEQMLSECS # LTSSHPLLVRNLCLGFRIGVMPPLTETIITPNYPSVSEYPQVVDQYIAEEVAAGRMDGPFTHNEIYLICRGHFRVSPFIVSKSEQGPGIPPKFRVCHN # LSKDGRDSKEYNAISKLFHQKDIISDNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g897 ### # start gene g898 Scaffold_1 AUGUSTUS gene 4319267 4319773 0.96 + . g898 Scaffold_1 AUGUSTUS transcript 4319267 4319773 0.96 + . g898.t1 Scaffold_1 AUGUSTUS start_codon 4319267 4319269 . + 0 transcript_id "g898.t1"; gene_id "g898"; Scaffold_1 AUGUSTUS CDS 4319267 4319773 0.96 + 0 transcript_id "g898.t1"; gene_id "g898"; Scaffold_1 AUGUSTUS stop_codon 4319771 4319773 . + 0 transcript_id "g898.t1"; gene_id "g898"; # protein sequence = [MYVRSISSIQWFFNNAVDEDEGLYHMILKHSRFDNDSPFLTAAHHAGFIPPPDDSVEPPLHWQMLGLSTALPHSDGVG # RWDDIVPALPSIDQLTADWEQLMLRYIHHITDTPLSGTDTQDPMSSVEPATESLAEVLVERSPEAPVALESTSSVGPPPTSLCSCPSRSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g898 ### # start gene g899 Scaffold_1 AUGUSTUS gene 4320229 4320717 0.41 - . g899 Scaffold_1 AUGUSTUS transcript 4320229 4320717 0.41 - . g899.t1 Scaffold_1 AUGUSTUS stop_codon 4320229 4320231 . - 0 transcript_id "g899.t1"; gene_id "g899"; Scaffold_1 AUGUSTUS CDS 4320229 4320717 0.41 - 0 transcript_id "g899.t1"; gene_id "g899"; Scaffold_1 AUGUSTUS start_codon 4320715 4320717 . - 0 transcript_id "g899.t1"; gene_id "g899"; # protein sequence = [MENVRTRRPMKKLDHKWMGPYSILSKVGSHAYQLDLPGDLHKIHNVFHVDRLKPHFHDKFKQQTSPPPPIFIKGETEH # FVEDILDSKPKKGRPDEVEYLVKWEGYSEEFNSWVGWEGMAGSLRLLRNWHKKHPKKRQPSQRHWACLEKDAQEDEEDKREDMR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g899 ### # start gene g900 Scaffold_1 AUGUSTUS gene 4321928 4322515 0.28 - . g900 Scaffold_1 AUGUSTUS transcript 4321928 4322515 0.28 - . g900.t1 Scaffold_1 AUGUSTUS stop_codon 4321928 4321930 . - 0 transcript_id "g900.t1"; gene_id "g900"; Scaffold_1 AUGUSTUS CDS 4321928 4322515 0.28 - 0 transcript_id "g900.t1"; gene_id "g900"; Scaffold_1 AUGUSTUS start_codon 4322513 4322515 . - 0 transcript_id "g900.t1"; gene_id "g900"; # protein sequence = [MDPEKVKAVMDWPKPRMVKELQAFLGFANFYRRFIDNYSGITKVFMKLLWKDSVWNWTPQCSSAFELLKSAFSEAPVL # GHYNPELPVVLECDASNLAIAGILSQLDPEMGEIHPIAFHARSMIATELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFSTTKQMT # ARQARWAELLSGYDFIINY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g900 ### # start gene g901 Scaffold_1 AUGUSTUS gene 4323495 4324424 0.69 - . g901 Scaffold_1 AUGUSTUS transcript 4323495 4324424 0.69 - . g901.t1 Scaffold_1 AUGUSTUS stop_codon 4323495 4323497 . - 0 transcript_id "g901.t1"; gene_id "g901"; Scaffold_1 AUGUSTUS CDS 4323495 4324424 0.69 - 0 transcript_id "g901.t1"; gene_id "g901"; Scaffold_1 AUGUSTUS start_codon 4324422 4324424 . - 0 transcript_id "g901.t1"; gene_id "g901"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQQPPEAPQPPPEVPQQPPEAPLRAPRTRVKLEEVKDEEYEASQPG # HTQVIPLGQRSRARRPNPYGDQRMASVRERKHGRRGGGNPRGWAIRHGESNPETTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYPDL # PTLDIESLNIPKIPSRSGLTPKGSIRRNNFRESSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g901 ### # start gene g902 Scaffold_1 AUGUSTUS gene 4332232 4332438 0.5 - . g902 Scaffold_1 AUGUSTUS transcript 4332232 4332438 0.5 - . g902.t1 Scaffold_1 AUGUSTUS stop_codon 4332232 4332234 . - 0 transcript_id "g902.t1"; gene_id "g902"; Scaffold_1 AUGUSTUS CDS 4332232 4332438 0.5 - 0 transcript_id "g902.t1"; gene_id "g902"; Scaffold_1 AUGUSTUS start_codon 4332436 4332438 . - 0 transcript_id "g902.t1"; gene_id "g902"; # protein sequence = [MDGGKKLQYLVQWKGYDEGHDTWENEENVVGSSDEAINEFYAAHPNAPRKISANDLSLTTMAANGQLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g902 ### # start gene g903 Scaffold_1 AUGUSTUS gene 4342683 4343033 0.41 - . g903 Scaffold_1 AUGUSTUS transcript 4342683 4343033 0.41 - . g903.t1 Scaffold_1 AUGUSTUS stop_codon 4342683 4342685 . - 0 transcript_id "g903.t1"; gene_id "g903"; Scaffold_1 AUGUSTUS CDS 4342683 4343033 0.41 - 0 transcript_id "g903.t1"; gene_id "g903"; Scaffold_1 AUGUSTUS start_codon 4343031 4343033 . - 0 transcript_id "g903.t1"; gene_id "g903"; # protein sequence = [MQSVGKLNYEKLFPDDGPPEDYYARATYKDVATAHFMAKAKELPWATPRMAHVYATSEGHIGQVVSLFDNFTHHLGQL # GTPRRPGPKQLTPEIIEQYQKAIGLDISPRWYYMYDQA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g903 ### # start gene g904 Scaffold_1 AUGUSTUS gene 4350194 4351240 0.76 + . g904 Scaffold_1 AUGUSTUS transcript 4350194 4351240 0.76 + . g904.t1 Scaffold_1 AUGUSTUS start_codon 4350194 4350196 . + 0 transcript_id "g904.t1"; gene_id "g904"; Scaffold_1 AUGUSTUS CDS 4350194 4351240 0.76 + 0 transcript_id "g904.t1"; gene_id "g904"; Scaffold_1 AUGUSTUS stop_codon 4351238 4351240 . + 0 transcript_id "g904.t1"; gene_id "g904"; # protein sequence = [MIHCFPTTTELTAEGVADFYYKEIFRLHGLPRRFISDRGPQFAADIMKALLKRLGIESALTTSYHPETNGQTERANQE # IERYIRMYVSRRQDDWDRLLPTAEFVINSRVHFAHDKAPFEVLYGYTPEFSIPIGSWKEYPSITDRLDALRHAREDAEAALRMSKQRIADTIAEHPNQ # PSFEVGQPVWLSVNNLKIRRKSEKLGSRRLGPFEVIEKTGAHTYRLALPTWMKIHDNINVKRLAPWKGNEVNGILPAPPEPEVIDGEEFYDVDRILDS # RIHGRWKKLQYLVRWKGYDEGHDTWENEENVVGSSDEAINEFYAAHPNAPRKISATIFHSLPWQPMVNFTEVNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g904 ### # start gene g905 Scaffold_1 AUGUSTUS gene 4353969 4354301 0.57 + . g905 Scaffold_1 AUGUSTUS transcript 4353969 4354301 0.57 + . g905.t1 Scaffold_1 AUGUSTUS start_codon 4353969 4353971 . + 0 transcript_id "g905.t1"; gene_id "g905"; Scaffold_1 AUGUSTUS CDS 4353969 4354301 0.57 + 0 transcript_id "g905.t1"; gene_id "g905"; Scaffold_1 AUGUSTUS stop_codon 4354299 4354301 . + 0 transcript_id "g905.t1"; gene_id "g905"; # protein sequence = [MHGPRLSGAKREWHKTVTFHEICKVVEFSRDEDESGEVFESDEDDNYGNAAEEDVDFFGEGKNEETPHDSYEDIELSD # QEPEVQLELDADTSITVLDHVHRGTVPRPQGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g905 ### # start gene g906 Scaffold_1 AUGUSTUS gene 4354885 4356663 0.67 - . g906 Scaffold_1 AUGUSTUS transcript 4354885 4356663 0.67 - . g906.t1 Scaffold_1 AUGUSTUS stop_codon 4354885 4354887 . - 0 transcript_id "g906.t1"; gene_id "g906"; Scaffold_1 AUGUSTUS CDS 4354885 4356663 0.67 - 0 transcript_id "g906.t1"; gene_id "g906"; Scaffold_1 AUGUSTUS start_codon 4356661 4356663 . - 0 transcript_id "g906.t1"; gene_id "g906"; # protein sequence = [MDASYVKGMINNPDMHPNAAMNRWIAAIQLFDFELKHVPGKDFVGPDGLSRRRQTEDEGDEEEGEADTWVEEILSCGI # WVASAWQGGSNAGGVLEYRDSDGAISLTVSAEDSWTEILIPHSKEVARRDNDLKLIKAYLSTFTTPRNLSEKQLKQFTKRASRFFLRGDQLWRREHSG # RHQIVIIPPSERLSLLRQTHDDLGHKGFFSTRRTIADRFWWPSLDDDLRWFLRTCHACQVRSTEKVVIPPSISTPATLFRRVHIDTMYMPKVQGYQFI # IQGRCSLSRWPEWRMLKSETGRTVGQFIFEEILCRWGGLEEITTDNGPAMVAALDWLGKKYKIHHIRIAAYNSQANGIVEVSHRYIRDGLVKACGGDI # RKWVSVAPYIFWADRITTRRDTGYSPYYIAHGVEPLLPFDITQATFLLPEIIRKLSDDDLIALRAQQLQRREEDLARIHERVIQSRFRSIEAFRKHHK # NVIRDYKFNPGDLVLVLNKRIEKGVSKKALPRYFGPMVVAKRTEGGNYRLAEVTGAISKLRYAAFRIIPYYARSSKRLDVTEFLDPRALAGIEDDGDD # DREEADEDSRDSIKHRLRPRTVDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g906 ### # start gene g907 Scaffold_1 AUGUSTUS gene 4356702 4356950 0.62 - . g907 Scaffold_1 AUGUSTUS transcript 4356702 4356950 0.62 - . g907.t1 Scaffold_1 AUGUSTUS stop_codon 4356702 4356704 . - 0 transcript_id "g907.t1"; gene_id "g907"; Scaffold_1 AUGUSTUS CDS 4356702 4356950 0.62 - 0 transcript_id "g907.t1"; gene_id "g907"; Scaffold_1 AUGUSTUS start_codon 4356948 4356950 . - 0 transcript_id "g907.t1"; gene_id "g907"; # protein sequence = [MDKVKDAISTSDALITIDYTSLLPVILAVDSSILGCESLSPNTTRRIDVDHPDSGPSLGTNVNPGTPKQKSNFMASSV # PSTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g907 ### # start gene g908 Scaffold_1 AUGUSTUS gene 4358391 4359191 0.83 - . g908 Scaffold_1 AUGUSTUS transcript 4358391 4359191 0.83 - . g908.t1 Scaffold_1 AUGUSTUS stop_codon 4358391 4358393 . - 0 transcript_id "g908.t1"; gene_id "g908"; Scaffold_1 AUGUSTUS CDS 4358391 4359191 0.83 - 0 transcript_id "g908.t1"; gene_id "g908"; Scaffold_1 AUGUSTUS start_codon 4359189 4359191 . - 0 transcript_id "g908.t1"; gene_id "g908"; # protein sequence = [MIHQEEQTSNHVQVIEEEQVLEGNEGEEVIWGAVIELERLQEEEAIGLAVTRGNNEGATKHEEQTKPHTTPRTQPAFN # YESKAVDPQAANRMFKRILAVVVPDVTVNDLVSLSSDLRKELIEHTRTQRAPRDKVPPPSSSLLTKSLQLDYSTPLREIPVTLAGKKVEVGLLDEGSE # IVVVRKDLWEEIGFKVNPMVKMLMQTANGGKEEMEGCAEFLEVVVDGLRTWVHAFVVPRAPYKLLLGRPWQKSEAGKRRAFRWASGCDNS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g908 ### # start gene g909 Scaffold_1 AUGUSTUS gene 4359249 4360544 0.94 - . g909 Scaffold_1 AUGUSTUS transcript 4359249 4360544 0.94 - . g909.t1 Scaffold_1 AUGUSTUS stop_codon 4359249 4359251 . - 0 transcript_id "g909.t1"; gene_id "g909"; Scaffold_1 AUGUSTUS CDS 4359249 4360544 0.94 - 0 transcript_id "g909.t1"; gene_id "g909"; Scaffold_1 AUGUSTUS start_codon 4360542 4360544 . - 0 transcript_id "g909.t1"; gene_id "g909"; # protein sequence = [MSTTRATTKGPAAMPAPGSSKAPTKFTGEAQDLKDFIEEFEDCADAQELTSEEKVKMVAKYVDRETKRYWKTLDAYAK # KDWGALKKELLKAYPGAEKGHRFSVLGLRRLAQKQARKRIASENDLVKYYQHFQVMSAALKADNKLTDNEVNRYFWFGIHQDDRRDILTQLENQDRAF # DRKTVPHMQKAVEAGRVVFCDEAMDLDWDDPIAEIVSKDTKRKKKIGRERREVISSEEDESSDSDNESDDEEEDRPKKKTVRQEVQTKVVARSNLDDI # EELAKKLRGLDVGDVNYAGTYARLVVLSPAVASAILSLPPQPMSTSAAASALPIQPYPRPNQGPGPATYPNNVPLPQNNYRQRNPQWNDRPPTALPRD # IQCHFCKENHLIRLSTCSGVYSTTEDHPHWKMVLLPGWAPKCALHDQGRRGGRDQGNHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g909 ### # start gene g910 Scaffold_1 AUGUSTUS gene 4362740 4363763 0.35 + . g910 Scaffold_1 AUGUSTUS transcript 4362740 4363763 0.35 + . g910.t1 Scaffold_1 AUGUSTUS start_codon 4362740 4362742 . + 0 transcript_id "g910.t1"; gene_id "g910"; Scaffold_1 AUGUSTUS CDS 4362740 4362917 0.35 + 0 transcript_id "g910.t1"; gene_id "g910"; Scaffold_1 AUGUSTUS CDS 4362994 4363763 0.93 + 2 transcript_id "g910.t1"; gene_id "g910"; Scaffold_1 AUGUSTUS stop_codon 4363761 4363763 . + 0 transcript_id "g910.t1"; gene_id "g910"; # protein sequence = [MENSAEMATIETAEKQKVVAVGVIQEHEPAETEASMEVTHDVTIDFEVKGEELQEQAEPTGDEVDSGMDDNDDADDDN # NGEEFGLLKTPAFTNSKKLKFDLGSKFGLGKLGLLDLELSSEDLTTPSTSKRSDLGFGFNASSSELPPKSVQNMPVGSVNVRMAMRNALDCLMDDVAS # VGGSTVEELHEVSMTTTEEDAPGSHLMQRAATDYALVGSLGPPPGSSVHSAMPSRNASSSSITPPPPPKDNICAREAIIIEKRQKMRRMEEGDDNDDD # GPLDNYGNKDDVDFFSEGKDEETTHDPHEDAEPPAKNRENS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g910 ### # start gene g911 Scaffold_1 AUGUSTUS gene 4367047 4367499 0.41 - . g911 Scaffold_1 AUGUSTUS transcript 4367047 4367499 0.41 - . g911.t1 Scaffold_1 AUGUSTUS stop_codon 4367047 4367049 . - 0 transcript_id "g911.t1"; gene_id "g911"; Scaffold_1 AUGUSTUS CDS 4367047 4367499 0.41 - 0 transcript_id "g911.t1"; gene_id "g911"; Scaffold_1 AUGUSTUS start_codon 4367497 4367499 . - 0 transcript_id "g911.t1"; gene_id "g911"; # protein sequence = [MCSLSMGENDVTMADAENLAGVIAVPCSSSTQAETANIVSRTEVSTVHPPAVKDITTIKIAHGQVLNFNRADVHDPRQ # ISFATNIPRLERVWDDEGTNWDPADCGTNLLSINGIPIALRYWPEVFSGKKDARWRALKKNWTEWKVSFYFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g911 ### # start gene g912 Scaffold_1 AUGUSTUS gene 4381029 4381586 0.58 - . g912 Scaffold_1 AUGUSTUS transcript 4381029 4381586 0.58 - . g912.t1 Scaffold_1 AUGUSTUS stop_codon 4381029 4381031 . - 0 transcript_id "g912.t1"; gene_id "g912"; Scaffold_1 AUGUSTUS CDS 4381029 4381586 0.58 - 0 transcript_id "g912.t1"; gene_id "g912"; Scaffold_1 AUGUSTUS start_codon 4381584 4381586 . - 0 transcript_id "g912.t1"; gene_id "g912"; # protein sequence = [MIMVFGEITTQAKLDYQKIIRETIKNIGYDDSAKGFDYKTCNILVAIEQQSPDIAQGLDHGSLESHGAGDQGIMFGYA # TDETEEYMPLTVVLSHKLNRALADARRTGLLPWVLPDTKTQVTIEYKKDGGATIPVRVDTVVISTQHTEDVSLGVLRKEVLEKIVKATIPLTYLMSEL # STTYVFSRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g912 ### # start gene g913 Scaffold_1 AUGUSTUS gene 4382195 4384325 0.83 - . g913 Scaffold_1 AUGUSTUS transcript 4382195 4384325 0.83 - . g913.t1 Scaffold_1 AUGUSTUS stop_codon 4382195 4382197 . - 0 transcript_id "g913.t1"; gene_id "g913"; Scaffold_1 AUGUSTUS CDS 4382195 4383764 0.97 - 1 transcript_id "g913.t1"; gene_id "g913"; Scaffold_1 AUGUSTUS CDS 4383883 4384245 0.86 - 1 transcript_id "g913.t1"; gene_id "g913"; Scaffold_1 AUGUSTUS CDS 4384321 4384325 0.87 - 0 transcript_id "g913.t1"; gene_id "g913"; Scaffold_1 AUGUSTUS start_codon 4384323 4384325 . - 0 transcript_id "g913.t1"; gene_id "g913"; # protein sequence = [MLSIQDEKLIETMFQSHFSPESRVSNAVVYGATTTNLVIDARPTTNAMANTAKGAGTENMDHYKEAKKVYLGIDHIHT # MRESLGKVVDALREADALLASINNDLSGQISGVSVLDRGALRRSGYHHYRNLCLDPFYRTIKGFEILIEKEWLSYGHKFLDRCGHLSSDKFFVSNTET # NGNSGGADAAQAFLASMQNRFASQNHVKETSPVFHQFLETVRQIQRQFPQRFEFNERFLHQLYYHPIRVSFGTFLFNSERERRLGDGNGPPPCDRTVS # VWDFFNSPSEMEQNLNELYDSSLDDPVSRIPGADMGVLFPNPKDVRFWHELYGRTDEEMNGRHIPVIVRPEVVGPVETVEDDPVNRIATPSNIPLPPS # PSKTPLPPPTQTLPRNVANSLLESNDSSPSTPELASLNLGSPSVVESFRPFLSTSSNFSMKPTSSPTSDSSSRPLTKAQEFFAGGGVKSVWGKLSFNA # SAAFSVVQGAYDGVARDLSTRPGPASPLPSRTEELSARSHLTSWGEEAHTVSVFSPSTLSSSSPPGVRNPWATVNSSKPSASSLFSPYDNPWNSAQAQ # DLGSEDEPKPPSPLPIDPTVSDPSLRAPANSIARSNSSSSRLAGNFTGIGSDGDSELSTPSQDLSSASTDPLGVGLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g913 ### # start gene g914 Scaffold_1 AUGUSTUS gene 4388903 4389367 0.79 + . g914 Scaffold_1 AUGUSTUS transcript 4388903 4389367 0.79 + . g914.t1 Scaffold_1 AUGUSTUS start_codon 4388903 4388905 . + 0 transcript_id "g914.t1"; gene_id "g914"; Scaffold_1 AUGUSTUS CDS 4388903 4389367 0.79 + 0 transcript_id "g914.t1"; gene_id "g914"; Scaffold_1 AUGUSTUS stop_codon 4389365 4389367 . + 0 transcript_id "g914.t1"; gene_id "g914"; # protein sequence = [MKLSTFFVSSALLFSVAIARPSRLAERVAARESRRSRPFTASTNAAIASSNATHAEFSTNWSGVVIETPPSGQTFSKV # TGTFVVPTPSGNSGAASAWVGIDGDTASQSILQSGVDFTISGGRVTYDAWFEWSADTFFFLYICSLIILKVPQLRH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g914 ### # start gene g915 Scaffold_1 AUGUSTUS gene 4390131 4391372 0.59 + . g915 Scaffold_1 AUGUSTUS transcript 4390131 4391372 0.59 + . g915.t1 Scaffold_1 AUGUSTUS start_codon 4390131 4390133 . + 0 transcript_id "g915.t1"; gene_id "g915"; Scaffold_1 AUGUSTUS CDS 4390131 4390811 0.74 + 0 transcript_id "g915.t1"; gene_id "g915"; Scaffold_1 AUGUSTUS CDS 4391133 4391372 0.76 + 0 transcript_id "g915.t1"; gene_id "g915"; Scaffold_1 AUGUSTUS stop_codon 4391370 4391372 . + 0 transcript_id "g915.t1"; gene_id "g915"; # protein sequence = [MPIRSQGYQLLPVKNNESEHSRENDDVSGVPSRRLRLGFLILFIVITFYALFLAPEKPSLTESFQNSAHPGLDKCASP # IAPAAKPPTRTNPWAPLVVSEITDIQRWLEAPQRELNLTRGSSAILSDNVVYLIETYYPAKADALAYLAGGSAPDKYAHVVIHHGGSDAPIIKNYLVG # PLPVSEQMSMRLLSEIYHESEIPFNARGFVNIEELRDVFKFISPELSEALDIVYNHQIFGSTEEFLQSYGTLIRVPEQVTGANEDFSWTTRKRVGTPR # DLDHLPGPRSVSFAGLRFTRVTEVLALIGTWD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g915 ### # start gene g916 Scaffold_1 AUGUSTUS gene 4395273 4396214 0.9 - . g916 Scaffold_1 AUGUSTUS transcript 4395273 4396214 0.9 - . g916.t1 Scaffold_1 AUGUSTUS stop_codon 4395273 4395275 . - 0 transcript_id "g916.t1"; gene_id "g916"; Scaffold_1 AUGUSTUS CDS 4395273 4396214 0.9 - 0 transcript_id "g916.t1"; gene_id "g916"; Scaffold_1 AUGUSTUS start_codon 4396212 4396214 . - 0 transcript_id "g916.t1"; gene_id "g916"; # protein sequence = [MVYQTSSSVRDLKSRGHSTAFNPRNLEHDWYPVWNEVFIDMKSLLSDVYIYPQYFLWLRNSKDLPLALRKRMLQHLDP # NEHGVTRELDDADHTLLALQADIDDSDIAPLLASSLLIDGDTSFGSTITVSGSEKDLIPDFSFMHLTSVPLGGYRANSAYATSRADRKILHECHLALC # EVKGAPSRHFSEPRKSKMRAELFEDAQTDLAMYANLYFVAEGGMRRDKLLLWACVGAFWTWTLVSREEVPAWDWVTGSFASGASPGRFRRRFSRNFEL # CTPESDQEINYLITHYFQPDQIHEREGNDGDDVMSEEGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g916 ### # start gene g917 Scaffold_1 AUGUSTUS gene 4407876 4410229 0.14 - . g917 Scaffold_1 AUGUSTUS transcript 4407876 4410229 0.14 - . g917.t1 Scaffold_1 AUGUSTUS stop_codon 4407876 4407878 . - 0 transcript_id "g917.t1"; gene_id "g917"; Scaffold_1 AUGUSTUS CDS 4407876 4408315 0.7 - 2 transcript_id "g917.t1"; gene_id "g917"; Scaffold_1 AUGUSTUS CDS 4408368 4408652 0.5 - 2 transcript_id "g917.t1"; gene_id "g917"; Scaffold_1 AUGUSTUS CDS 4408708 4409283 0.34 - 2 transcript_id "g917.t1"; gene_id "g917"; Scaffold_1 AUGUSTUS CDS 4409548 4410229 0.91 - 0 transcript_id "g917.t1"; gene_id "g917"; Scaffold_1 AUGUSTUS start_codon 4410227 4410229 . - 0 transcript_id "g917.t1"; gene_id "g917"; # protein sequence = [MQPKFGRPEEFIWQYISVPPVCIRPSVAQDGGSNEDDLTVKLTEIVFTNAVIKQGLARGVPTPQFMEQWDLLQLSVAM # YINSELPGVPSQMGLKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPQRVAQILTYPERVTSHNIEALQQAVRNGPEIHPGA # NFVSRGQNKKFLKFGNRKAIADGLAIGDIVERHIIDGDVALFNRQPSLHKVHIPQTEEARTEALELMNIKHNLVTPRNGEPVIAAIQDFITASYLLSR # KDQFFDRRQVTQICCYMADANLQIDIPPPTILKPVRLWTGKQIFSVLMRPNRKSKIMVNVESKCHRWEEAKPENYPDRMKLAKDMSPNDGWLVIVNSE # VMCGVMDKAIVGSGKKKSIFGVIMRDYGPHEAAAAMNRLAKLCARWLANYGFSLGINDVIPGPELSTKKDGLVEEAYAHCQRLITKAKNGELENKPGC # DQEQTLEAEISSVLSKVREAVGQICMKELSRQNAPLIMATCGSKGSVINVSQMVACVGQQIIAGHRVPNGFQDRSLPHFPKHSKEPPSKGFVRNSFYS # GLVATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLTTQYDLSVRNSTGGVVQFRYGDDGLDPACLEGDAQPLDLDRAWQYATVSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g917 ### # start gene g918 Scaffold_1 AUGUSTUS gene 4412006 4412445 0.39 + . g918 Scaffold_1 AUGUSTUS transcript 4412006 4412445 0.39 + . g918.t1 Scaffold_1 AUGUSTUS start_codon 4412006 4412008 . + 0 transcript_id "g918.t1"; gene_id "g918"; Scaffold_1 AUGUSTUS CDS 4412006 4412221 0.39 + 0 transcript_id "g918.t1"; gene_id "g918"; Scaffold_1 AUGUSTUS CDS 4412272 4412445 0.41 + 0 transcript_id "g918.t1"; gene_id "g918"; Scaffold_1 AUGUSTUS stop_codon 4412443 4412445 . + 0 transcript_id "g918.t1"; gene_id "g918"; # protein sequence = [MILIGIDAEYGPQCFKLDPAGYFVGYHATAAGQKQQEAMNHLEKKWKKLDNGRGADDPIAAGQKLSRAEVIEMAIEAM # STVHGVDYKPSEIEIGIVSTSPEEDVKTQGSWRTMDESEIEKHLLAYAEKD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g918 ### # start gene g919 Scaffold_1 AUGUSTUS gene 4413550 4414161 0.67 - . g919 Scaffold_1 AUGUSTUS transcript 4413550 4414161 0.67 - . g919.t1 Scaffold_1 AUGUSTUS stop_codon 4413550 4413552 . - 0 transcript_id "g919.t1"; gene_id "g919"; Scaffold_1 AUGUSTUS CDS 4413550 4413653 0.8 - 2 transcript_id "g919.t1"; gene_id "g919"; Scaffold_1 AUGUSTUS CDS 4413712 4413823 0.75 - 0 transcript_id "g919.t1"; gene_id "g919"; Scaffold_1 AUGUSTUS CDS 4413880 4414039 0.81 - 1 transcript_id "g919.t1"; gene_id "g919"; Scaffold_1 AUGUSTUS CDS 4414091 4414161 0.9 - 0 transcript_id "g919.t1"; gene_id "g919"; Scaffold_1 AUGUSTUS start_codon 4414159 4414161 . - 0 transcript_id "g919.t1"; gene_id "g919"; # protein sequence = [MSLAESSETRKARLQELKQRKEASQGIIKNRNFDPESRTLKKHTASEDVEMDTVEKNIDGLAQLVIAEDEEKRAEELN # VFNIAPKRPNWDLKRETDKKLAKLERKTQEAIHTLIRQRLAAQKGESDDIVGAMRAQENAQNEEALSDEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g919 ### # start gene g920 Scaffold_1 AUGUSTUS gene 4415766 4416463 0.36 + . g920 Scaffold_1 AUGUSTUS transcript 4415766 4416463 0.36 + . g920.t1 Scaffold_1 AUGUSTUS start_codon 4415766 4415768 . + 0 transcript_id "g920.t1"; gene_id "g920"; Scaffold_1 AUGUSTUS CDS 4415766 4415784 0.41 + 0 transcript_id "g920.t1"; gene_id "g920"; Scaffold_1 AUGUSTUS CDS 4415965 4416107 0.46 + 2 transcript_id "g920.t1"; gene_id "g920"; Scaffold_1 AUGUSTUS CDS 4416200 4416463 0.48 + 0 transcript_id "g920.t1"; gene_id "g920"; Scaffold_1 AUGUSTUS stop_codon 4416461 4416463 . + 0 transcript_id "g920.t1"; gene_id "g920"; # protein sequence = [MKESSEGRQVYAGIFPVDSSDFPKLEESIKRVPSSNCLVTNTHSDLSSLLLLTERLEDEYDANIIITAPTVPYKGKNS # MTSIIYCKPLIRIPVLYRDGTEKFISNPTEFPDMSDSTTKVSEIQEPIVKASIIVPEGTASLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g920 ### # start gene g921 Scaffold_1 AUGUSTUS gene 4417507 4417887 0.51 - . g921 Scaffold_1 AUGUSTUS transcript 4417507 4417887 0.51 - . g921.t1 Scaffold_1 AUGUSTUS stop_codon 4417507 4417509 . - 0 transcript_id "g921.t1"; gene_id "g921"; Scaffold_1 AUGUSTUS CDS 4417507 4417887 0.51 - 0 transcript_id "g921.t1"; gene_id "g921"; Scaffold_1 AUGUSTUS start_codon 4417885 4417887 . - 0 transcript_id "g921.t1"; gene_id "g921"; # protein sequence = [MAASLSSAGISTFLVPDSSIYALMSRVNKVILGAHAILANGGMFATSGSLLAATAARSYSTPVVVCAGQFKLTPLWNL # YHEYGALDFGDPSAVLGFEEGDLVDKVDVVNPYYDYVRPELLDVFITN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g921 ### # start gene g922 Scaffold_1 AUGUSTUS gene 4422391 4423288 0.58 + . g922 Scaffold_1 AUGUSTUS transcript 4422391 4423288 0.58 + . g922.t1 Scaffold_1 AUGUSTUS start_codon 4422391 4422393 . + 0 transcript_id "g922.t1"; gene_id "g922"; Scaffold_1 AUGUSTUS CDS 4422391 4422393 0.62 + 0 transcript_id "g922.t1"; gene_id "g922"; Scaffold_1 AUGUSTUS CDS 4422866 4423288 0.7 + 0 transcript_id "g922.t1"; gene_id "g922"; Scaffold_1 AUGUSTUS stop_codon 4423286 4423288 . + 0 transcript_id "g922.t1"; gene_id "g922"; # protein sequence = [MGNQKVTEYLSQISHKGEPATSRSPPPPRLSTPTLNVNKDGPPIANTTADPTVLPARFGQFGGQYVPEAIVDCLAELE # EAHKSAMADPEFWKEFRGLYGYMNRPSELYLAENLTKDAGGANIWLKREDLCEDLLTTTDDSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g922 ### # start gene g923 Scaffold_1 AUGUSTUS gene 4424070 4424384 0.78 + . g923 Scaffold_1 AUGUSTUS transcript 4424070 4424384 0.78 + . g923.t1 Scaffold_1 AUGUSTUS start_codon 4424070 4424072 . + 0 transcript_id "g923.t1"; gene_id "g923"; Scaffold_1 AUGUSTUS CDS 4424070 4424384 0.78 + 0 transcript_id "g923.t1"; gene_id "g923"; Scaffold_1 AUGUSTUS stop_codon 4424382 4424384 . + 0 transcript_id "g923.t1"; gene_id "g923"; # protein sequence = [MQSPAGQIIETHSISAGLDYPGVGPEHSWLKDSGRAEYIVATDEEALRGFRILTQREGIIPGLSYLRRNYIGLNYLCL # ALESSHAIWGAMQLAKTLPKDAISLW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g923 ### # start gene g924 Scaffold_1 AUGUSTUS gene 4426179 4427858 0.99 + . g924 Scaffold_1 AUGUSTUS transcript 4426179 4427858 0.99 + . g924.t1 Scaffold_1 AUGUSTUS start_codon 4426179 4426181 . + 0 transcript_id "g924.t1"; gene_id "g924"; Scaffold_1 AUGUSTUS CDS 4426179 4427858 0.99 + 0 transcript_id "g924.t1"; gene_id "g924"; Scaffold_1 AUGUSTUS stop_codon 4427856 4427858 . + 0 transcript_id "g924.t1"; gene_id "g924"; # protein sequence = [MSRQSTLSSAGTLRRGTPNKTRPESVNEVLEPTETDNTPTVTATKEQIAREYLTSKAAIIGTNALLTKEDVYDTMLRA # TRLPKKEIDVTLKTVEHGITLLRDIDEKRSQRELLGEIKGAVESLFAKLDIEKQLQHQLTQVRNEFNERLDSIAANINGTEEKIDSIAKKSQPITPEI # SYADITRTNGKRTMAPTQAMTRQRMRAHVEVKHRQILILNAGNDAGKEIISKNPGEMLEYLNNMLIKMGALNKGTFVSATKLKNTDNLLTEVSSPELA # DWIHRVEQMIQFTTLSSQALTIADKEYEIILHFVPTTFSADDAFELRRLEDINDLPTCSITRAKWAKAVQRRKEGQRVASLLLYLNNANAANRLLLSG # AVISNKRVEAEKTVREEKRCYKCQRFGHIAGQCTEEVENICGKCGEHHSTANCSSEKRYCINCKTDEHASLDRECPIFRQKCESLNKCSPTNLLPFFP # SDEEWTWAEEPDNAPRMGPPPKITFRQDRHQQRQTQLTGWQQSNQLNVNTLPLGGPLRWGSQDPTGSQNEIADISDENQEVYVRNRTLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g924 ### # start gene g925 Scaffold_1 AUGUSTUS gene 4428851 4431639 0.72 + . g925 Scaffold_1 AUGUSTUS transcript 4428851 4431639 0.72 + . g925.t1 Scaffold_1 AUGUSTUS start_codon 4428851 4428853 . + 0 transcript_id "g925.t1"; gene_id "g925"; Scaffold_1 AUGUSTUS CDS 4428851 4431393 0.73 + 0 transcript_id "g925.t1"; gene_id "g925"; Scaffold_1 AUGUSTUS CDS 4431474 4431639 0.79 + 1 transcript_id "g925.t1"; gene_id "g925"; Scaffold_1 AUGUSTUS stop_codon 4431637 4431639 . + 0 transcript_id "g925.t1"; gene_id "g925"; # protein sequence = [MKKALNRLSAKSYKYRAIPDDDSHRELRELRTQYKALIFKEKEEHWKDFLDNVDTDSIFTAAKYATTPNIDQDTTTVI # PELKALDENGAVRRIASTNEEKAALLAETFFPSAPRNYSLDRNPCRDQLPNPPPITQQRIIDALQRLKSYKAPGPDGIPNIILKKCAGMLAPYLCEIY # NAIGYLKAYPKEWLNSTTVVIRKPARKSYSLPKSYRPIALINTLAKGYTSIIAEDITFLATQHNLLPDTQFGGRPCRMTTDGIHMVIDKIKNAWRNKR # EASMLSLDIEGAFPNAVTQRLLYNLRKRRIPERLVQAVSLSLKGRVTRLKFGDFTSAPISLTNGIGQGDPLSMIAYLFYNADFFDIAFKSRRQGLSVG # FVDDKNILVEGKSLTGNVEMIESFMNKPGGGFSWATKHNSSFELSKLVLTHFPRPKTKQEAPPPALVLQGTAVTEKTEVRMLGITLDSKLKWNEQAAQ # AAAKASSIASAFWKLSRPSAGVSLKMMRKLYLTVVIPKMTYGLDVWYTPPHRPEGAKNRRGSLKALRNFTRIQRMVTITTAGAMRSSPMDLLDIHTNL # LPMDLMLEKICHRAILRIYTLPDENPVVKIAQAAFRQRRVEKMAPPLRLLPRIFGLPSPATVETITSPQRTAQWTSPIETRILKKDDASRSLEEESAT # YKIFSDGSGYGGMIGAAAVLYKNGQLLTDAVLRYQLGPITEHTTYDAEGVGILLGLQLIDRYVNEPNHLSSLICLDGRSAIEALESRLPKSGQNIIEA # TLRTAKRMAKANNTEKISTIAWIPGHCGIEGNERADREAKKAAEGNTSAKVDLPAYLRNGNLPATASAIRQHFHKSLKTRWAHRGDATKANKHPIPTA # NRTCAPKLAPPQDRKGRQPKLPTLRHRREDNHRNGKTLHY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g925 ### # start gene g926 Scaffold_1 AUGUSTUS gene 4432717 4433874 0.94 + . g926 Scaffold_1 AUGUSTUS transcript 4432717 4433874 0.94 + . g926.t1 Scaffold_1 AUGUSTUS start_codon 4432717 4432719 . + 0 transcript_id "g926.t1"; gene_id "g926"; Scaffold_1 AUGUSTUS CDS 4432717 4433874 0.94 + 0 transcript_id "g926.t1"; gene_id "g926"; Scaffold_1 AUGUSTUS stop_codon 4433872 4433874 . + 0 transcript_id "g926.t1"; gene_id "g926"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVK # QNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQPRRQQISATAAPFTLFPNESVQIAASIPTPVAGPATPSPANQDFSTQIGQIRELLDRAN # AMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g926 ### # start gene g927 Scaffold_1 AUGUSTUS gene 4437368 4438072 0.41 + . g927 Scaffold_1 AUGUSTUS transcript 4437368 4438072 0.41 + . g927.t1 Scaffold_1 AUGUSTUS start_codon 4437368 4437370 . + 0 transcript_id "g927.t1"; gene_id "g927"; Scaffold_1 AUGUSTUS CDS 4437368 4437575 0.56 + 0 transcript_id "g927.t1"; gene_id "g927"; Scaffold_1 AUGUSTUS CDS 4437636 4438072 0.68 + 2 transcript_id "g927.t1"; gene_id "g927"; Scaffold_1 AUGUSTUS stop_codon 4438070 4438072 . + 0 transcript_id "g927.t1"; gene_id "g927"; # protein sequence = [MMRLAPSKELDVFAPLRGKGSPGASKAVSPPKVSDVISPPPVTKAQAVPPRALRRNREIESLKADASSFLASPRSTHS # KDSDNELLSGFPLVDEAPRASSSAKVSVGRKEPKSKTTVKVVEDPKADHPPLAGMAYKRVRLPPRSRKNTSIASKGKARQIVVTDEDSTSNEVESEDE # DEDEDTAPPPKRLKTTSSISGKIFILHFLSHFINSIRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g927 ### # start gene g928 Scaffold_1 AUGUSTUS gene 4438670 4439226 0.36 + . g928 Scaffold_1 AUGUSTUS transcript 4438670 4439226 0.36 + . g928.t1 Scaffold_1 AUGUSTUS start_codon 4438670 4438672 . + 0 transcript_id "g928.t1"; gene_id "g928"; Scaffold_1 AUGUSTUS CDS 4438670 4438718 0.36 + 0 transcript_id "g928.t1"; gene_id "g928"; Scaffold_1 AUGUSTUS CDS 4438781 4439226 0.65 + 2 transcript_id "g928.t1"; gene_id "g928"; Scaffold_1 AUGUSTUS stop_codon 4439224 4439226 . + 0 transcript_id "g928.t1"; gene_id "g928"; # protein sequence = [MDALNALHKASTSSTHNLANSLRRATDLNDQLKQIGSLFDTARELFLRSILDLQNAGEDPIVVLEALKTAEPNRRAIT # LNEWTLMATLFRWPSPFNLSGLDFDNRTPGEWIELLRSIQSGESTVHIDEHGHLVEASPPPDSATEALEGLKESRGGLRTRGPAVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g928 ### # start gene g929 Scaffold_1 AUGUSTUS gene 4441076 4441750 0.89 + . g929 Scaffold_1 AUGUSTUS transcript 4441076 4441750 0.89 + . g929.t1 Scaffold_1 AUGUSTUS start_codon 4441076 4441078 . + 0 transcript_id "g929.t1"; gene_id "g929"; Scaffold_1 AUGUSTUS CDS 4441076 4441241 0.89 + 0 transcript_id "g929.t1"; gene_id "g929"; Scaffold_1 AUGUSTUS CDS 4441323 4441750 1 + 2 transcript_id "g929.t1"; gene_id "g929"; Scaffold_1 AUGUSTUS stop_codon 4441748 4441750 . + 0 transcript_id "g929.t1"; gene_id "g929"; # protein sequence = [MFCIHDSFHVVESSRTPYPTGPNKGSNKDEKSAVNEVSPRLSKVHCHTDSHVSSNLTHSKHINHALAQVVSSNLDTPP # APLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSVSDASFATAQSIPTTGSEDTVVTPTEIAVPVPKTVER # ATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g929 ### # start gene g930 Scaffold_1 AUGUSTUS gene 4442006 4443759 0.32 - . g930 Scaffold_1 AUGUSTUS transcript 4442006 4443759 0.32 - . g930.t1 Scaffold_1 AUGUSTUS stop_codon 4442006 4442008 . - 0 transcript_id "g930.t1"; gene_id "g930"; Scaffold_1 AUGUSTUS CDS 4442006 4442299 0.62 - 0 transcript_id "g930.t1"; gene_id "g930"; Scaffold_1 AUGUSTUS CDS 4442383 4443759 0.45 - 0 transcript_id "g930.t1"; gene_id "g930"; Scaffold_1 AUGUSTUS start_codon 4443757 4443759 . - 0 transcript_id "g930.t1"; gene_id "g930"; # protein sequence = [MGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDE # EFVQNNPYPEAHRSSEGNRLDELIPLIEKYLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHRNTDQPDQPQLVVEKEKRMHMLNSAHDCLGH # KGVFATNDFLQKRFWWPDIYKDVEWYVRSCKECQNRQMRLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTL # GEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGC # SPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLTTKGGSYIIAE # MDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDENSVRERINN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g930 ### # start gene g931 Scaffold_1 AUGUSTUS gene 4445423 4445785 0.99 - . g931 Scaffold_1 AUGUSTUS transcript 4445423 4445785 0.99 - . g931.t1 Scaffold_1 AUGUSTUS stop_codon 4445423 4445425 . - 0 transcript_id "g931.t1"; gene_id "g931"; Scaffold_1 AUGUSTUS CDS 4445423 4445785 0.99 - 0 transcript_id "g931.t1"; gene_id "g931"; Scaffold_1 AUGUSTUS start_codon 4445783 4445785 . - 0 transcript_id "g931.t1"; gene_id "g931"; # protein sequence = [MVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDE # TNKQVDNEAIGVEKPINLNTEEVFTKYNQLIKRLPYKGNVTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g931 ### # start gene g932 Scaffold_1 AUGUSTUS gene 4445903 4447977 0.96 - . g932 Scaffold_1 AUGUSTUS transcript 4445903 4447977 0.96 - . g932.t1 Scaffold_1 AUGUSTUS stop_codon 4445903 4445905 . - 0 transcript_id "g932.t1"; gene_id "g932"; Scaffold_1 AUGUSTUS CDS 4445903 4446711 0.99 - 2 transcript_id "g932.t1"; gene_id "g932"; Scaffold_1 AUGUSTUS CDS 4446786 4447977 0.97 - 0 transcript_id "g932.t1"; gene_id "g932"; Scaffold_1 AUGUSTUS start_codon 4447975 4447977 . - 0 transcript_id "g932.t1"; gene_id "g932"; # protein sequence = [MFESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEE # DIAKKIFDAKVDLSTEELAALSPAIRKIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVG # SIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRM # QDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNE # PKNVTPDNEKSTGENDSKGNFHSSMNGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQ # FNLNPIKSFFLQNGRIKPKPVRKKVQKRRFVEPILQNFSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQ # RSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVNEAIGVEKPINLNTEEVFTKYKPVERRLTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g932 ### # start gene g933 Scaffold_1 AUGUSTUS gene 4448242 4449638 0.84 - . g933 Scaffold_1 AUGUSTUS transcript 4448242 4449638 0.84 - . g933.t1 Scaffold_1 AUGUSTUS stop_codon 4448242 4448244 . - 0 transcript_id "g933.t1"; gene_id "g933"; Scaffold_1 AUGUSTUS CDS 4448242 4449046 0.98 - 1 transcript_id "g933.t1"; gene_id "g933"; Scaffold_1 AUGUSTUS CDS 4449157 4449638 0.85 - 0 transcript_id "g933.t1"; gene_id "g933"; Scaffold_1 AUGUSTUS start_codon 4449636 4449638 . - 0 transcript_id "g933.t1"; gene_id "g933"; # protein sequence = [MIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPLRLTNRGHINLPFAADVPKT # DRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGP # SNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANM # EDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g933 ### # start gene g934 Scaffold_1 AUGUSTUS gene 4453442 4454896 0.88 - . g934 Scaffold_1 AUGUSTUS transcript 4453442 4454896 0.88 - . g934.t1 Scaffold_1 AUGUSTUS stop_codon 4453442 4453444 . - 0 transcript_id "g934.t1"; gene_id "g934"; Scaffold_1 AUGUSTUS CDS 4453442 4454896 0.88 - 0 transcript_id "g934.t1"; gene_id "g934"; Scaffold_1 AUGUSTUS start_codon 4454894 4454896 . - 0 transcript_id "g934.t1"; gene_id "g934"; # protein sequence = [MDIEALHQAIILALPKDPSSVVGLELAKDPSSECWSLGSDGLLRLDNRIYVPNHGNLRLQVLRYFHDHPLSGHFGQNR # TLEAVRRQYTWPKVRDFVCDYVTSCTTCGCNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTFNTITSEQLA # ELFVIHVFSKHGVPNHVTSDRGFEFVSAFFWALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDNWSHLLPIAEFAYNNAPNASTGI # TPFFANKGYHPNITVWPEVDMKSDLARDFVINLDELHVFLREEILLAQSRYKEQADRKRISHPEFLIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVI # SRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNIAKILDSKLDRRYKHCPLCYYIRWAGYEGTDDEFSWVAVDEL # HADKLVPAFHARYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g934 ### # start gene g935 Scaffold_1 AUGUSTUS gene 4455081 4455925 0.34 - . g935 Scaffold_1 AUGUSTUS transcript 4455081 4455925 0.34 - . g935.t1 Scaffold_1 AUGUSTUS stop_codon 4455081 4455083 . - 0 transcript_id "g935.t1"; gene_id "g935"; Scaffold_1 AUGUSTUS CDS 4455081 4455546 0.92 - 1 transcript_id "g935.t1"; gene_id "g935"; Scaffold_1 AUGUSTUS CDS 4455660 4455925 0.34 - 0 transcript_id "g935.t1"; gene_id "g935"; Scaffold_1 AUGUSTUS start_codon 4455923 4455925 . - 0 transcript_id "g935.t1"; gene_id "g935"; # protein sequence = [MPFGLMNAPAAFQCFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHQKHVKEVLQWLRKHWLYANPDKCEFNMDTVEYL # GYILSPDGLTIDIIVPMTRLTRKGAPWIWDNDCQEAFENLKIAFTSAPILAHWEPNCPIIVETDASGYAIAVILSIQTVDGEIHPLAFLSRTLHAAEL # NYDTHDKELLAICEAFKAWRHYLEGSGDPVDVVTDHKNLEYSTTKILTHQQVRWSEYLHQFNMVICF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g935 ### # start gene g936 Scaffold_1 AUGUSTUS gene 4457049 4458142 0.34 + . g936 Scaffold_1 AUGUSTUS transcript 4457049 4458142 0.34 + . g936.t1 Scaffold_1 AUGUSTUS start_codon 4457049 4457051 . + 0 transcript_id "g936.t1"; gene_id "g936"; Scaffold_1 AUGUSTUS CDS 4457049 4457319 0.42 + 0 transcript_id "g936.t1"; gene_id "g936"; Scaffold_1 AUGUSTUS CDS 4457421 4457724 0.42 + 2 transcript_id "g936.t1"; gene_id "g936"; Scaffold_1 AUGUSTUS CDS 4457896 4458142 0.73 + 1 transcript_id "g936.t1"; gene_id "g936"; Scaffold_1 AUGUSTUS stop_codon 4458140 4458142 . + 0 transcript_id "g936.t1"; gene_id "g936"; # protein sequence = [MPPKTRAQSRANFEENTFFTTAQSSAPFSESISAIGQPCRRNRSFGPATVPTTLTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPCCGQPRESPRDPPLTSIWTLVITMIKTLLSTLTTPGADNNNDNLENDSGDLPHGEPGDPSGPGGPGGPGGPHFPISPDIPTSNMLCWNFSQD # SRVPLKPLVPFSPPRPGSAKERFVPDILNPDLNSLPAWSSSFKALVKPLQDNFGVYDAQGEAEDSLSNLKMKETENIRKYNIRFNTLAASTNWDSAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g936 ### # start gene g937 Scaffold_1 AUGUSTUS gene 4458187 4458615 0.99 + . g937 Scaffold_1 AUGUSTUS transcript 4458187 4458615 0.99 + . g937.t1 Scaffold_1 AUGUSTUS start_codon 4458187 4458189 . + 0 transcript_id "g937.t1"; gene_id "g937"; Scaffold_1 AUGUSTUS CDS 4458187 4458615 0.99 + 0 transcript_id "g937.t1"; gene_id "g937"; Scaffold_1 AUGUSTUS stop_codon 4458613 4458615 . + 0 transcript_id "g937.t1"; gene_id "g937"; # protein sequence = [MAHLPEPVMLADYRQEVLCIDNCYWKCGETQKREAGKPFIAQNPKKGSSDFKTGSTNQQNNSQPSGSSALFTPKPKPF # SGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGGKHQIADCNK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g937 ### # start gene g938 Scaffold_1 AUGUSTUS gene 4467519 4468637 0.89 + . g938 Scaffold_1 AUGUSTUS transcript 4467519 4468637 0.89 + . g938.t1 Scaffold_1 AUGUSTUS start_codon 4467519 4467521 . + 0 transcript_id "g938.t1"; gene_id "g938"; Scaffold_1 AUGUSTUS CDS 4467519 4468637 0.89 + 0 transcript_id "g938.t1"; gene_id "g938"; Scaffold_1 AUGUSTUS stop_codon 4468635 4468637 . + 0 transcript_id "g938.t1"; gene_id "g938"; # protein sequence = [MSRPTLWSTADMDDDLADAVDAELSIYAQQGQNPAIYDQLGAQIEQLEPLLAIQQHMAALAAVPDVVKSVSGAEPFDE # LNSILPQFIVSFHQAILNRDLPSITMFYTTTFPKLTDRFYSRAEWPEPEIIAPLLSSNNATEDQVHIFLVLYRDLYYRHVYSRLQPNIDDRFHSYENS # CELFNYLLNSPSSANDESDEPAPVDLVLPEQWLWDIIDEFIYQFQVFCSWRSKVKSKTDDELMMLADGTGVWSSYSVLNVLYSLIQKSKINEYIVALK # EEQGKEILGLRRKWRNPFPPIRLFLSTEPLDTFLSLDFSVCTYSSVTLPLGSKSWIKWGNFSLAAPVSAPKPTNPPSPPFLPFQQLISQLIIMSVFAI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g938 ### # start gene g939 Scaffold_1 AUGUSTUS gene 4478280 4480549 0.15 + . g939 Scaffold_1 AUGUSTUS transcript 4478280 4480549 0.15 + . g939.t1 Scaffold_1 AUGUSTUS start_codon 4478280 4478282 . + 0 transcript_id "g939.t1"; gene_id "g939"; Scaffold_1 AUGUSTUS CDS 4478280 4478429 0.31 + 0 transcript_id "g939.t1"; gene_id "g939"; Scaffold_1 AUGUSTUS CDS 4478481 4479029 0.38 + 0 transcript_id "g939.t1"; gene_id "g939"; Scaffold_1 AUGUSTUS CDS 4479125 4480549 0.61 + 0 transcript_id "g939.t1"; gene_id "g939"; Scaffold_1 AUGUSTUS stop_codon 4480547 4480549 . + 0 transcript_id "g939.t1"; gene_id "g939"; # protein sequence = [MCAISSHGGRRRFQVLAIVFLMALSSFLLASSKKQTTVDTELDALFQSTAKEFEVSSSTLRSGKLKRKHQDVGSAPSK # LAIKKAKAKESKSSLKQKKILLPDTGTTKLNNPTKTSNAIVEKSSDGDEEEREESKPDGDDENDSELENAYLSRANGKGNFSASHRAGKHEEQSEGAD # DDVEEASSGADDDDEGRPPPDHESLTKRQRSKKPPKSIIKYVPPDENQDQRNARTIFSLLKSLQRHILSLILTPSGSSNMTPRIESTRFRSVPFAVPT # SRLEKEGDQSSTNNSNPKSSTKSRQHDIDRTKSWRRSSGDKDDEDAVKGEKQFLTPAQKKKVAFINQEIHASGSSVNAYIVFAHPTPASASDEVPKRK # SNLPPLPDVMNPYDAARLAKEYCDGSEFMERTLRVDVVAHTTDLSVAEAGRVLRTGSDVDPKRCVFVGNLDFESKEEDVRTYFEGIISAEKGPRPGEG # TEEKDVWSDDEGNEKKKGSAKARARSEGWVIRVRIIRDKDTQLGKGFAYVQFADRDCVDEILAAALEPGKLKFAKRKLRVERCKTIPGGSFKVKVKST # PITSSSRPNNPNHPSNFKTKRSTPSTSLASISIPKGDPTLGAKLAHLSKEDRKSAKAGDADRMARRLAKKKSRMVMAVGGRTGTGGVKLQGKERDRER # KLRSGGDAHGKKGKGHGAGSGTKNKGKAISTRALEQRNAKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g939 ### # start gene g940 Scaffold_1 AUGUSTUS gene 4483299 4484198 0.58 - . g940 Scaffold_1 AUGUSTUS transcript 4483299 4484198 0.58 - . g940.t1 Scaffold_1 AUGUSTUS stop_codon 4483299 4483301 . - 0 transcript_id "g940.t1"; gene_id "g940"; Scaffold_1 AUGUSTUS CDS 4483299 4484198 0.58 - 0 transcript_id "g940.t1"; gene_id "g940"; Scaffold_1 AUGUSTUS start_codon 4484196 4484198 . - 0 transcript_id "g940.t1"; gene_id "g940"; # protein sequence = [MWDPLWNLLALKIKDVNAGKPTVTVGVMSQYRIEKNYGNVRRYKVPDTVVLGLDDTPQKVLLFWAEIKPLDYYDWFTP # EAYDAARVQIANTVNQVNTQAQYICEEFQIDRTRPFTIYAFIIAGPYWVLVDYTNNSLSPDFFTTAHSRRNGPYIRSQVPVPVAEDAGIEIDVGVEVP # AEEEDAEDVVTAPGFPYGTEPRCSFKMRRLGDDDRDDDSKGDELGEDNDDELDDLNEDEGDEEEEAKSEGGMFNGEFSLDLPLRRYHINPILLMALRR # IMGNNHDAFRRRMQNVSWFDCNYGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g940 ### # start gene g941 Scaffold_1 AUGUSTUS gene 4487973 4488746 0.71 - . g941 Scaffold_1 AUGUSTUS transcript 4487973 4488746 0.71 - . g941.t1 Scaffold_1 AUGUSTUS stop_codon 4487973 4487975 . - 0 transcript_id "g941.t1"; gene_id "g941"; Scaffold_1 AUGUSTUS CDS 4487973 4488746 0.71 - 0 transcript_id "g941.t1"; gene_id "g941"; Scaffold_1 AUGUSTUS start_codon 4488744 4488746 . - 0 transcript_id "g941.t1"; gene_id "g941"; # protein sequence = [MNPTIKSLAVPARNKRSRPNSSNDTSDDVGSVASRLKRRKASLAASSDPAPQGNTPTAAPPPVSTSPVIPSVPSNPVD # RAISSAQPVQRSDGPFNLWGPMPVHMHRVPATRQTASSSAHVAASSNNPSITASGLPRIEESYNLWTAKFPIPFERRRNLSPDPADSSQPATDSNQPN # VGNLLNAPSSSSVTSSSLPIASSSRPTTTSSQPIASSSQPTASFSQPTERRRPAPLKRANERLMMNSDGTLELMISTPQNA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g941 ### # start gene g942 Scaffold_1 AUGUSTUS gene 4496500 4497325 0.38 - . g942 Scaffold_1 AUGUSTUS transcript 4496500 4497325 0.38 - . g942.t1 Scaffold_1 AUGUSTUS stop_codon 4496500 4496502 . - 0 transcript_id "g942.t1"; gene_id "g942"; Scaffold_1 AUGUSTUS CDS 4496500 4496849 0.46 - 2 transcript_id "g942.t1"; gene_id "g942"; Scaffold_1 AUGUSTUS CDS 4496902 4497325 0.4 - 0 transcript_id "g942.t1"; gene_id "g942"; Scaffold_1 AUGUSTUS start_codon 4497323 4497325 . - 0 transcript_id "g942.t1"; gene_id "g942"; # protein sequence = [MELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPE # VDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTLDLVLCLTSSSSQTIFADSPGFPRLTAGAGYAESF # PNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g942 ### # start gene g943 Scaffold_1 AUGUSTUS gene 4500795 4501882 0.46 - . g943 Scaffold_1 AUGUSTUS transcript 4500795 4501882 0.46 - . g943.t1 Scaffold_1 AUGUSTUS stop_codon 4500795 4500797 . - 0 transcript_id "g943.t1"; gene_id "g943"; Scaffold_1 AUGUSTUS CDS 4500795 4501185 0.76 - 1 transcript_id "g943.t1"; gene_id "g943"; Scaffold_1 AUGUSTUS CDS 4501275 4501726 0.76 - 0 transcript_id "g943.t1"; gene_id "g943"; Scaffold_1 AUGUSTUS CDS 4501841 4501882 0.65 - 0 transcript_id "g943.t1"; gene_id "g943"; Scaffold_1 AUGUSTUS start_codon 4501880 4501882 . - 0 transcript_id "g943.t1"; gene_id "g943"; # protein sequence = [MEENNNSNTAPCTLPAVRETTPTSAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPGGPGGPGGPGGPGGPGGPRSPSPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTGSAKEWFVPDI # LDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLAD # YVKKFFVLTIVIGNARKLEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g943 ### # start gene g944 Scaffold_1 AUGUSTUS gene 4502700 4503077 0.6 + . g944 Scaffold_1 AUGUSTUS transcript 4502700 4503077 0.6 + . g944.t1 Scaffold_1 AUGUSTUS start_codon 4502700 4502702 . + 0 transcript_id "g944.t1"; gene_id "g944"; Scaffold_1 AUGUSTUS CDS 4502700 4503077 0.6 + 0 transcript_id "g944.t1"; gene_id "g944"; Scaffold_1 AUGUSTUS stop_codon 4503075 4503077 . + 0 transcript_id "g944.t1"; gene_id "g944"; # protein sequence = [MFLKLEAKPGTLVQTADCAGTGEGVPGAGGEIEIESGMHEEFAAVGTNGGGGSPRRHARFGVATPYLLKYHLGRLAPI # LSPPRTLTAQQMALEVFVDGEKEEEEKSLIILWFLLLHMLQVMASPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g944 ### # start gene g945 Scaffold_1 AUGUSTUS gene 4507657 4510110 0.6 - . g945 Scaffold_1 AUGUSTUS transcript 4507657 4510110 0.6 - . g945.t1 Scaffold_1 AUGUSTUS stop_codon 4507657 4507659 . - 0 transcript_id "g945.t1"; gene_id "g945"; Scaffold_1 AUGUSTUS CDS 4507657 4510110 0.6 - 0 transcript_id "g945.t1"; gene_id "g945"; Scaffold_1 AUGUSTUS start_codon 4510108 4510110 . - 0 transcript_id "g945.t1"; gene_id "g945"; # protein sequence = [MFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEY # LGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPT # RIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYL # SRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDN # GLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLIT # QLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQE # VEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRK # AHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEE # ILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g945 ### # start gene g946 Scaffold_1 AUGUSTUS gene 4510250 4511371 0.85 - . g946 Scaffold_1 AUGUSTUS transcript 4510250 4511371 0.85 - . g946.t1 Scaffold_1 AUGUSTUS stop_codon 4510250 4510252 . - 0 transcript_id "g946.t1"; gene_id "g946"; Scaffold_1 AUGUSTUS CDS 4510250 4511371 0.85 - 0 transcript_id "g946.t1"; gene_id "g946"; Scaffold_1 AUGUSTUS start_codon 4511369 4511371 . - 0 transcript_id "g946.t1"; gene_id "g946"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKGWETPFRTRLPETERVHCEEPIPSPIS # C] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g946 ### # start gene g947 Scaffold_1 AUGUSTUS gene 4511422 4512588 0.87 - . g947 Scaffold_1 AUGUSTUS transcript 4511422 4512588 0.87 - . g947.t1 Scaffold_1 AUGUSTUS stop_codon 4511422 4511424 . - 0 transcript_id "g947.t1"; gene_id "g947"; Scaffold_1 AUGUSTUS CDS 4511422 4512588 0.87 - 0 transcript_id "g947.t1"; gene_id "g947"; Scaffold_1 AUGUSTUS start_codon 4512586 4512588 . - 0 transcript_id "g947.t1"; gene_id "g947"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g947 ### # start gene g948 Scaffold_1 AUGUSTUS gene 4514581 4514931 0.6 + . g948 Scaffold_1 AUGUSTUS transcript 4514581 4514931 0.6 + . g948.t1 Scaffold_1 AUGUSTUS start_codon 4514581 4514583 . + 0 transcript_id "g948.t1"; gene_id "g948"; Scaffold_1 AUGUSTUS CDS 4514581 4514931 0.6 + 0 transcript_id "g948.t1"; gene_id "g948"; Scaffold_1 AUGUSTUS stop_codon 4514929 4514931 . + 0 transcript_id "g948.t1"; gene_id "g948"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLQMPPFRRKLGGVSEGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g948 ### # start gene g949 Scaffold_1 AUGUSTUS gene 4515787 4517262 0.66 + . g949 Scaffold_1 AUGUSTUS transcript 4515787 4517262 0.66 + . g949.t1 Scaffold_1 AUGUSTUS start_codon 4515787 4515789 . + 0 transcript_id "g949.t1"; gene_id "g949"; Scaffold_1 AUGUSTUS CDS 4515787 4517262 0.66 + 0 transcript_id "g949.t1"; gene_id "g949"; Scaffold_1 AUGUSTUS stop_codon 4517260 4517262 . + 0 transcript_id "g949.t1"; gene_id "g949"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPKMRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g949 ### # start gene g950 Scaffold_1 AUGUSTUS gene 4518843 4519373 0.6 + . g950 Scaffold_1 AUGUSTUS transcript 4518843 4519373 0.6 + . g950.t1 Scaffold_1 AUGUSTUS start_codon 4518843 4518845 . + 0 transcript_id "g950.t1"; gene_id "g950"; Scaffold_1 AUGUSTUS CDS 4518843 4519373 0.6 + 0 transcript_id "g950.t1"; gene_id "g950"; Scaffold_1 AUGUSTUS stop_codon 4519371 4519373 . + 0 transcript_id "g950.t1"; gene_id "g950"; # protein sequence = [MSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAED # INLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g950 ### # start gene g951 Scaffold_1 AUGUSTUS gene 4520347 4521792 0.06 - . g951 Scaffold_1 AUGUSTUS transcript 4520347 4521792 0.06 - . g951.t1 Scaffold_1 AUGUSTUS stop_codon 4520347 4520349 . - 0 transcript_id "g951.t1"; gene_id "g951"; Scaffold_1 AUGUSTUS CDS 4520347 4520540 0.58 - 2 transcript_id "g951.t1"; gene_id "g951"; Scaffold_1 AUGUSTUS CDS 4520620 4520769 0.94 - 2 transcript_id "g951.t1"; gene_id "g951"; Scaffold_1 AUGUSTUS CDS 4520849 4520984 0.72 - 0 transcript_id "g951.t1"; gene_id "g951"; Scaffold_1 AUGUSTUS CDS 4521625 4521792 0.86 - 0 transcript_id "g951.t1"; gene_id "g951"; Scaffold_1 AUGUSTUS start_codon 4521790 4521792 . - 0 transcript_id "g951.t1"; gene_id "g951"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKDEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNKPDSGSDSSASDASFATAQSIPTTGSE # DTVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g951 ### # start gene g952 Scaffold_1 AUGUSTUS gene 4522779 4523437 0.59 - . g952 Scaffold_1 AUGUSTUS transcript 4522779 4523437 0.59 - . g952.t1 Scaffold_1 AUGUSTUS stop_codon 4522779 4522781 . - 0 transcript_id "g952.t1"; gene_id "g952"; Scaffold_1 AUGUSTUS CDS 4522779 4523326 1 - 2 transcript_id "g952.t1"; gene_id "g952"; Scaffold_1 AUGUSTUS CDS 4523389 4523437 0.59 - 0 transcript_id "g952.t1"; gene_id "g952"; Scaffold_1 AUGUSTUS start_codon 4523435 4523437 . - 0 transcript_id "g952.t1"; gene_id "g952"; # protein sequence = [MDALNALHTASSSSTHNLANSLRRAADLNDQLKQLGSLFDTTKELFLRSILDLQNAGTDPIVVLKALKAAEPNRRAIN # LNEWTLLATLFRWPSPFNLSGLDFDNRTPGEWIKLLRSIHSGESTASIDEHSHLVESSPPPDSAAEALEGLNDVEKGSADEDTSSQVGGSVPMELDLP # TIKSLAERTLSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g952 ### # start gene g953 Scaffold_1 AUGUSTUS gene 4524037 4524414 0.46 - . g953 Scaffold_1 AUGUSTUS transcript 4524037 4524414 0.46 - . g953.t1 Scaffold_1 AUGUSTUS stop_codon 4524037 4524039 . - 0 transcript_id "g953.t1"; gene_id "g953"; Scaffold_1 AUGUSTUS CDS 4524037 4524414 0.46 - 0 transcript_id "g953.t1"; gene_id "g953"; Scaffold_1 AUGUSTUS start_codon 4524412 4524414 . - 0 transcript_id "g953.t1"; gene_id "g953"; # protein sequence = [MSGFLLVDAAPRASLSTKVPLGRKEPKSKTTFKVVEDSKASNSSSRKIAPITAKGKSQQVVVSDDDSASNEVESEDEE # EDEDEDEEEDEEEEEEDSAPPPKHLKTTSSISGKTLFFLLFPLINSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g953 ### # start gene g954 Scaffold_1 AUGUSTUS gene 4530070 4531122 0.74 + . g954 Scaffold_1 AUGUSTUS transcript 4530070 4531122 0.74 + . g954.t1 Scaffold_1 AUGUSTUS start_codon 4530070 4530072 . + 0 transcript_id "g954.t1"; gene_id "g954"; Scaffold_1 AUGUSTUS CDS 4530070 4531122 0.74 + 0 transcript_id "g954.t1"; gene_id "g954"; Scaffold_1 AUGUSTUS stop_codon 4531120 4531122 . + 0 transcript_id "g954.t1"; gene_id "g954"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIK # DEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSG # QSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g954 ### # start gene g955 Scaffold_1 AUGUSTUS gene 4533779 4534591 0.94 + . g955 Scaffold_1 AUGUSTUS transcript 4533779 4534591 0.94 + . g955.t1 Scaffold_1 AUGUSTUS start_codon 4533779 4533781 . + 0 transcript_id "g955.t1"; gene_id "g955"; Scaffold_1 AUGUSTUS CDS 4533779 4534591 0.94 + 0 transcript_id "g955.t1"; gene_id "g955"; Scaffold_1 AUGUSTUS stop_codon 4534589 4534591 . + 0 transcript_id "g955.t1"; gene_id "g955"; # protein sequence = [MDFIEQLPMLNGYTAILVVVDRSSKQAIFIPTLDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVLAFFRALGKA # LSMELHYTSGYHPEADGQTECVNQTLEQYIRIYCSYQQDDWSPLLPIAEFTYNNAPNASTGITPFFTNKGYHPNITVRPEVDMKSDLARDFVVNLDEL # HVFLQEEILLAQSCYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTENSQKNILVLSRSSVDLVLCLTSSSSWTIFAASTRSSMYHSWSRLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g955 ### # start gene g956 Scaffold_1 AUGUSTUS gene 4546338 4547215 0.15 - . g956 Scaffold_1 AUGUSTUS transcript 4546338 4547215 0.15 - . g956.t1 Scaffold_1 AUGUSTUS stop_codon 4546338 4546340 . - 0 transcript_id "g956.t1"; gene_id "g956"; Scaffold_1 AUGUSTUS CDS 4546338 4546630 0.96 - 2 transcript_id "g956.t1"; gene_id "g956"; Scaffold_1 AUGUSTUS CDS 4546705 4546825 0.69 - 0 transcript_id "g956.t1"; gene_id "g956"; Scaffold_1 AUGUSTUS CDS 4546892 4547215 0.24 - 0 transcript_id "g956.t1"; gene_id "g956"; Scaffold_1 AUGUSTUS start_codon 4547213 4547215 . - 0 transcript_id "g956.t1"; gene_id "g956"; # protein sequence = [MAHKDNLQTAVGTADDSKWYFSPLYPQSSDRCILSVPVDAFAGQIDEAANGGNSSTSSTAKLSLQDAVNLKAALRTQV # EGVLAAFAANQNASLLTAGSNFNFTGNLTTETVAQANSDADAAQAAGTTSINAGNAGVGEVQTAIKNSLLVSTVQSVTNGATLLGASPTTAAAVATTT # AAAAATTTAAASVSSAAAAAVTSTTTNKKSKNNKASTNNAASNKDDKSARALNKRLLRSRVRAVFDDVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g956 ### # start gene g957 Scaffold_1 AUGUSTUS gene 4549286 4550514 0.19 - . g957 Scaffold_1 AUGUSTUS transcript 4549286 4550514 0.19 - . g957.t1 Scaffold_1 AUGUSTUS stop_codon 4549286 4549288 . - 0 transcript_id "g957.t1"; gene_id "g957"; Scaffold_1 AUGUSTUS CDS 4549286 4549944 0.59 - 2 transcript_id "g957.t1"; gene_id "g957"; Scaffold_1 AUGUSTUS CDS 4550024 4550276 0.47 - 0 transcript_id "g957.t1"; gene_id "g957"; Scaffold_1 AUGUSTUS CDS 4550320 4550514 0.57 - 0 transcript_id "g957.t1"; gene_id "g957"; Scaffold_1 AUGUSTUS start_codon 4550512 4550514 . - 0 transcript_id "g957.t1"; gene_id "g957"; # protein sequence = [MDQERRLITAQSLQTLFDSTNTSLTIVRNVAEFSAHKLDEGDVSDVEDIDTRDPAIVAIDVASQVLFEPPQSYLRKLK # HQYLEQNAKDKYVKLIVTDIDDPPTVTDGDNKQLEKQNMEQKEKLKVAKEKLSTIEEEFRVVSSKVEEGRAKLAQKIIDARLALSRLRQTHPHPRVTV # QTADKKLEDQVMEMQALTDEMQVVEQKVHSVKGKLKSESLEMESLKSQRNEVEKSVKKSESGFNDDRRFVPLYDWSVISVFQLVSVNLTYLHRLTGSL # MIHRSMQGLEVMEAISENELRLQYGVEDKHGRSRSISITLIFVPNSRKLAAANANVQGMEEFAIDFSDIIEAHLQMNNIRGMLAAILARTREGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g957 ### # start gene g958 Scaffold_1 AUGUSTUS gene 4557407 4558015 0.46 + . g958 Scaffold_1 AUGUSTUS transcript 4557407 4558015 0.46 + . g958.t1 Scaffold_1 AUGUSTUS start_codon 4557407 4557409 . + 0 transcript_id "g958.t1"; gene_id "g958"; Scaffold_1 AUGUSTUS CDS 4557407 4558015 0.46 + 0 transcript_id "g958.t1"; gene_id "g958"; Scaffold_1 AUGUSTUS stop_codon 4558013 4558015 . + 0 transcript_id "g958.t1"; gene_id "g958"; # protein sequence = [MKDMTEAASTMMTDEEKAEIDKQLNPDKPSTPPVAGEQTPAIHHEEPPPNPTSVANTSSELPTSSPSSLSEATTQPNG # NSSLVIHGEHAQSPSPSPSHSVAEKEKLEKEREAARKRKAEQKEKLREQEKERRKVMEARVNMLTTKMIERLRPFVDAKHPGDKDDPETLAFEAKMKR # EVEDLKLESFGVEVRSSKVCSTTEND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g958 ### # start gene g959 Scaffold_1 AUGUSTUS gene 4562440 4563035 0.56 + . g959 Scaffold_1 AUGUSTUS transcript 4562440 4563035 0.56 + . g959.t1 Scaffold_1 AUGUSTUS start_codon 4562440 4562442 . + 0 transcript_id "g959.t1"; gene_id "g959"; Scaffold_1 AUGUSTUS CDS 4562440 4562551 0.61 + 0 transcript_id "g959.t1"; gene_id "g959"; Scaffold_1 AUGUSTUS CDS 4562722 4563035 0.6 + 2 transcript_id "g959.t1"; gene_id "g959"; Scaffold_1 AUGUSTUS stop_codon 4563033 4563035 . + 0 transcript_id "g959.t1"; gene_id "g959"; # protein sequence = [MPSDTAAKLWDDDINRRIFDLMHSQNTAENFGGLLAIASKTLGQIAEIGGSAFGERFMDFEVPAAIDLVKQESPRYAG # VLILKELARNSPTYFHSHISMVFENILVSLRDQRVMVREGAAELLAACLESSLSVNVKHGARS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g959 ### # start gene g960 Scaffold_1 AUGUSTUS gene 4566331 4567295 0.39 + . g960 Scaffold_1 AUGUSTUS transcript 4566331 4567295 0.39 + . g960.t1 Scaffold_1 AUGUSTUS start_codon 4566331 4566333 . + 0 transcript_id "g960.t1"; gene_id "g960"; Scaffold_1 AUGUSTUS CDS 4566331 4566565 0.39 + 0 transcript_id "g960.t1"; gene_id "g960"; Scaffold_1 AUGUSTUS CDS 4566649 4567295 0.86 + 2 transcript_id "g960.t1"; gene_id "g960"; Scaffold_1 AUGUSTUS stop_codon 4567293 4567295 . + 0 transcript_id "g960.t1"; gene_id "g960"; # protein sequence = [MIVNQQHLKQAWDTSDVSTKEDWTAWMHKLSVEFMKESPSPALRACMSLVDVHTPLAKELFNAAFLSCWTELYDQYQV # SISAPSAPSELIHRWLNLAEFMEHEEKPLPIEHRTLGEYALKYLAYAKALHYKELEYWSEPSPSTIEALITINTRLQQHDAAWGTLLMAREQYDVTRH # EEWYERLGRWQEALQVYNKKAESDPNAPGVQIGRMKCLNALGEWDQLAVQVDEIWDHANHDDRREIGPIAAAAAWSLNEWDSMDDYIATMRPDSPDRA # FYRAIYPYTKTSFRKQKHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g960 ### # start gene g961 Scaffold_1 AUGUSTUS gene 4571839 4572210 0.56 - . g961 Scaffold_1 AUGUSTUS transcript 4571839 4572210 0.56 - . g961.t1 Scaffold_1 AUGUSTUS stop_codon 4571839 4571841 . - 0 transcript_id "g961.t1"; gene_id "g961"; Scaffold_1 AUGUSTUS CDS 4571839 4572210 0.56 - 0 transcript_id "g961.t1"; gene_id "g961"; Scaffold_1 AUGUSTUS start_codon 4572208 4572210 . - 0 transcript_id "g961.t1"; gene_id "g961"; # protein sequence = [MVISTQHLLPGPSDTPALQYTDQKGGVFLVIVKVRGLIAKSNSRQTSSDAGPTLGTSSNIIVEGSIDVPMEVIDIELE # DNKSSGPQQSSPSKSARRPSSEPVQPFPGSFGVDVSLRPVNYLWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g961 ### # start gene g962 Scaffold_1 AUGUSTUS gene 4577944 4579371 1 + . g962 Scaffold_1 AUGUSTUS transcript 4577944 4579371 1 + . g962.t1 Scaffold_1 AUGUSTUS start_codon 4577944 4577946 . + 0 transcript_id "g962.t1"; gene_id "g962"; Scaffold_1 AUGUSTUS CDS 4577944 4579371 1 + 0 transcript_id "g962.t1"; gene_id "g962"; Scaffold_1 AUGUSTUS stop_codon 4579369 4579371 . + 0 transcript_id "g962.t1"; gene_id "g962"; # protein sequence = [MFPSSEQVTSNLYPLQCEEAACKPFVHRSGSESFYEDIAQLVSSSISPANSPDTVDDDLSSSPGLSPTHTSPNYYYVD # RVEPSFGSPSSPTEMYDTDPPSAYPASSSNIYQQPLPTPQNTYSFTAVNDIRESDAPASYPSDSPSPGDVQSSADFSHSYPESHPQHPHISSYQTDSD # PRYNPATLSRDSYLETSSASNISSSGLLDQRRMSEPAILAIPNNYSTNSSTADTSSRYSYPMSYNNSSRSSYAPSLQRGSSIGSLRDLRLHHQHLHYS # SPRSHNGWKTEDDSHHMAHSTHVNEGLDSPLSPFQPSFTGGQVGGSPTMAQGLQYSSIAEDHCSASPTGTSTPASLGTSRLPSQASISAGDAPGEDVD # ADGNRSPMDPNSKTYSFVALPGNTVKKRPRRRYDEIERLYQCSWPDCNKAYGTLNHLNAHVTMQKHGSKRSPNGKFTRFFLSTSPYFILLRSELVLHL # FPRFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g962 ### # start gene g963 Scaffold_1 AUGUSTUS gene 4583473 4583763 0.84 + . g963 Scaffold_1 AUGUSTUS transcript 4583473 4583763 0.84 + . g963.t1 Scaffold_1 AUGUSTUS start_codon 4583473 4583475 . + 0 transcript_id "g963.t1"; gene_id "g963"; Scaffold_1 AUGUSTUS CDS 4583473 4583763 0.84 + 0 transcript_id "g963.t1"; gene_id "g963"; Scaffold_1 AUGUSTUS stop_codon 4583761 4583763 . + 0 transcript_id "g963.t1"; gene_id "g963"; # protein sequence = [MGEMDNEEENSAHSTNDRLIMCAPWDLQTDPVVLPSLPSLPKLFGAEPDSDTPRVVKIAGFDNAMIALTNQGHVLLFD # TLQSASESSLGSWKYVSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g963 ### # start gene g964 Scaffold_1 AUGUSTUS gene 4584012 4584443 0.84 + . g964 Scaffold_1 AUGUSTUS transcript 4584012 4584443 0.84 + . g964.t1 Scaffold_1 AUGUSTUS start_codon 4584012 4584014 . + 0 transcript_id "g964.t1"; gene_id "g964"; Scaffold_1 AUGUSTUS CDS 4584012 4584443 0.84 + 0 transcript_id "g964.t1"; gene_id "g964"; Scaffold_1 AUGUSTUS stop_codon 4584441 4584443 . + 0 transcript_id "g964.t1"; gene_id "g964"; # protein sequence = [MGDTETNPDTLPKIIPGLQDKSIISVVLGDYHFAAVTATGKLLTWGQYSDGALGLGDPGSLQAGTPGGFANETLRVRA # LETRHGTPPDVEIPTEVRFDSHRKKPKDRFWFSAAASGWHTGALVIDLEASLTRDPFTTFRFNND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g964 ### # start gene g965 Scaffold_1 AUGUSTUS gene 4584913 4585872 0.62 - . g965 Scaffold_1 AUGUSTUS transcript 4584913 4585872 0.62 - . g965.t1 Scaffold_1 AUGUSTUS stop_codon 4584913 4584915 . - 0 transcript_id "g965.t1"; gene_id "g965"; Scaffold_1 AUGUSTUS CDS 4584913 4585872 0.62 - 0 transcript_id "g965.t1"; gene_id "g965"; Scaffold_1 AUGUSTUS start_codon 4585870 4585872 . - 0 transcript_id "g965.t1"; gene_id "g965"; # protein sequence = [MIESLRSQCASLQVETAHFPALQEEENNFQMIQSCPHVPPASPSARDGDNDWAFADSLLQEFPEFCSKQNLEPPNVEL # QSDKIFPEASITDPAQLTHTISSNDPSNSHLPSPSIAGSVSPTPSSNSPRGILKRCKSVRFAEAPLIDPDSVHTTPVQEVVCPSTRHSTGPPIARSLK # RPSPLRHTYAPQLKLTSSADSSLPLRNAGSLKPTIASETTNSKPSVHLQRTAMKKLGRECIVSSPIKPHKPKTQGPPSLGRSFRNTLISGKENKLIKL # RTSSFANRHTMDENALRRVGNSSSPSETLKSRMPVPLRNILTRFK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g965 ### # start gene g966 Scaffold_1 AUGUSTUS gene 4586580 4586942 0.58 + . g966 Scaffold_1 AUGUSTUS transcript 4586580 4586942 0.58 + . g966.t1 Scaffold_1 AUGUSTUS start_codon 4586580 4586582 . + 0 transcript_id "g966.t1"; gene_id "g966"; Scaffold_1 AUGUSTUS CDS 4586580 4586942 0.58 + 0 transcript_id "g966.t1"; gene_id "g966"; Scaffold_1 AUGUSTUS stop_codon 4586940 4586942 . + 0 transcript_id "g966.t1"; gene_id "g966"; # protein sequence = [MKFHSHTVHLDIQRSSLSRVLRRGGVGIVVVEVDSVLGCRFAEAQVMSFIVRNVGRGVLQPEGNGGIESKDKMEIVSR # DNDSDNKLWSKSESASSDGVLGVLVRDDMSVGYSESATLNLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g966 ### # start gene g967 Scaffold_1 AUGUSTUS gene 4589629 4591811 0.77 + . g967 Scaffold_1 AUGUSTUS transcript 4589629 4591811 0.77 + . g967.t1 Scaffold_1 AUGUSTUS start_codon 4589629 4589631 . + 0 transcript_id "g967.t1"; gene_id "g967"; Scaffold_1 AUGUSTUS CDS 4589629 4589957 0.78 + 0 transcript_id "g967.t1"; gene_id "g967"; Scaffold_1 AUGUSTUS CDS 4590298 4590436 0.99 + 1 transcript_id "g967.t1"; gene_id "g967"; Scaffold_1 AUGUSTUS CDS 4591413 4591811 0.99 + 0 transcript_id "g967.t1"; gene_id "g967"; Scaffold_1 AUGUSTUS stop_codon 4591809 4591811 . + 0 transcript_id "g967.t1"; gene_id "g967"; # protein sequence = [MQNLMELDHGWASLDEAFIFRVVQVLSSPHSLINVCRPATAILKKLVEADPSNTPGPQAGSSKNGPVIVPGSIYRYGF # TMVFEQMRKEKSLLETIVNRLGSADTAMAQYSYIWDHSKLIEESDEKGQQLKWRKLGFDTEDIELEFNDVGVLGLECLDNSTKYLHYVDSAVKFPVRS # GLEDLPDRIEIATVSEIATGTCAPPPNVLRDHDDLPPTTPLAPSPLSFSLLSIHEEQGSLADLIAPDQSRWADWTDGLNMLRKDGGHVASKETAGFVQ # ALTEIGLKIKLLGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g967 ### # start gene g968 Scaffold_1 AUGUSTUS gene 4592270 4593950 0.46 - . g968 Scaffold_1 AUGUSTUS transcript 4592270 4593950 0.46 - . g968.t1 Scaffold_1 AUGUSTUS stop_codon 4592270 4592272 . - 0 transcript_id "g968.t1"; gene_id "g968"; Scaffold_1 AUGUSTUS CDS 4592270 4592467 0.7 - 0 transcript_id "g968.t1"; gene_id "g968"; Scaffold_1 AUGUSTUS CDS 4593399 4593950 0.47 - 0 transcript_id "g968.t1"; gene_id "g968"; Scaffold_1 AUGUSTUS start_codon 4593948 4593950 . - 0 transcript_id "g968.t1"; gene_id "g968"; # protein sequence = [MGKEEWEAVEGGFVHGIDLVRHIRREYGDYFDIAVAGFPQHQTLPPEERDLEMRYLKEKVDAGVNFIFTQMFYDVDVF # IDWVNTVRAAGITIPIVPGIAPIQTWNGFQRATSLAQTIIPQTFQDALEPHKANDEKVREIGTKLVADMCRRILNANLGIHGLHFYTMNLEKGTRMLL # EELNLVPRDEAFELGQQWARVYDPDSPSAKIISELMDSCYLVNVVHNDFHDAGAIFKPFFQAGEEYATQANGH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g968 ### # start gene g969 Scaffold_1 AUGUSTUS gene 4596277 4597407 0.85 + . g969 Scaffold_1 AUGUSTUS transcript 4596277 4597407 0.85 + . g969.t1 Scaffold_1 AUGUSTUS start_codon 4596277 4596279 . + 0 transcript_id "g969.t1"; gene_id "g969"; Scaffold_1 AUGUSTUS CDS 4596277 4597407 0.85 + 0 transcript_id "g969.t1"; gene_id "g969"; Scaffold_1 AUGUSTUS stop_codon 4597405 4597407 . + 0 transcript_id "g969.t1"; gene_id "g969"; # protein sequence = [MSDHDLCSTSSFLDNPAVSSMEVELSATTESSQIIDSPYITENPHNNLDRDPKTPRRASEVFGFLAEKRKSRPTEETF # DKLLSKPPSTFSSPSDKDPSESTALSRFSEDSSMFNHNPPIVTPSRDASSSEFSRHSNSNTYPNPSSNPSSQRPVSRMLFEDGRASRVPQQQLTDQPS # GPIEEDVREVKVILIAPTKVIVTAPTPLADTSDRPTTRMTRGPRSLHRHRSRNNAKERGYREGLVERSNSSNSSDPFTPIPSRPMKLRSSSGSLSLTY # MDSKTTHSHGHISNPMPLGKESRSRRHGSTKSLMSAVFDKENSHNHTLGLVATPDIPFTPVRSNSSSRSSLLRAAVTAASFKPPRDMTPSPASSTELS # PVGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g969 ### # start gene g970 Scaffold_1 AUGUSTUS gene 4598676 4600483 0.09 + . g970 Scaffold_1 AUGUSTUS transcript 4598676 4600483 0.09 + . g970.t1 Scaffold_1 AUGUSTUS start_codon 4598676 4598678 . + 0 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4598676 4598789 0.47 + 0 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4598887 4598908 0.97 + 0 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4599125 4599429 0.55 + 2 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4599471 4599566 0.72 + 0 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4599622 4599823 0.6 + 0 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4599873 4600113 0.37 + 2 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS CDS 4600174 4600483 0.61 + 1 transcript_id "g970.t1"; gene_id "g970"; Scaffold_1 AUGUSTUS stop_codon 4600481 4600483 . + 0 transcript_id "g970.t1"; gene_id "g970"; # protein sequence = [MMTNVDMDEENIQYDDDDGAEEAPLIEVVLVGEKDLERFIPCTYNRRKRKTLCTNSSTTACGNYSTISGPKSSVSVST # ESNSITRKSTSTFEKPKRSDFFAKAKPKEVVKKEKSTKEESSNSKAKITAATSKISEPEEKLSNVGAKEVGREHKREFPPESKEDKIKASSTKGKAPA # NHRTGHKRKSPDSETEIGSPSVTVKKNVIISDEEEDQSTPKVEHPKGRNKGKQAMRGSDEDVLKMMDVDDDQVIRVSHSRASPDLNTAVGSETEDVEM # QDHTQHSKPAPQIKKKATKVKTIVPIGRNGLRKKRVMKSKMTVDEKGYMGKGFAYESVEEGVPDSEPAKGKGKPRKDTAGGTNKSNKMETPRSRKVKD # EEEEKVVQEDIETPSTNLKPAPKPKLKTSTSTSSKGSGASTSQKNIASFFGKSKGSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g970 ### # start gene g971 Scaffold_1 AUGUSTUS gene 4603765 4605921 0.52 + . g971 Scaffold_1 AUGUSTUS transcript 4603765 4605921 0.52 + . g971.t1 Scaffold_1 AUGUSTUS start_codon 4603765 4603767 . + 0 transcript_id "g971.t1"; gene_id "g971"; Scaffold_1 AUGUSTUS CDS 4603765 4604362 0.63 + 0 transcript_id "g971.t1"; gene_id "g971"; Scaffold_1 AUGUSTUS CDS 4604735 4605921 0.66 + 2 transcript_id "g971.t1"; gene_id "g971"; Scaffold_1 AUGUSTUS stop_codon 4605919 4605921 . + 0 transcript_id "g971.t1"; gene_id "g971"; # protein sequence = [MQRSPHDRRVKPQSHTGSVTGEDADSSDIEPSEAGSVGGRSSVTGGSSKKRMTMEEREAAYNEARSRIFNEKGRDTDM # SASSSSISVASSSAGGSSLGDGEDSVNSLATESERSSPSSNRRGNSSIKSSGSRPLRSSAQPFTSSGSGSSRNSRAPSPAFTYASLYEPASSGSFDPN # SANQQYPSAPFGYPYSAPAPAHPAVIPPTTNNGSAHDGVPGSNNKSLNHRASNGHTKPQTTPLSRPAWSYGPGISMGGTMVTMAGSNSNGSGETTGPR # LHSMRRQSNTSNGSSSGAYRSSNSDEASSIAVSLTPSHLLQPSLISFLYQSSSTSSSSRRTYTSTASSQHPLPPRPDWAVGLKPDPTLHSTNSSRHHD # NSSRNSPVSPPRVPNGTGHSNNSHRRPQQTQPLISLQSQDFPPLTAMATPEKRPTAGGVWTNPSRSVMTTPALGVTSSGNALVHHPNAPNIPFTNSEA # NGFRAEDGFQRPPPRTAELYNPKISKRSNTMQVQGEKNSDGRLNDQIRGLSLVDGPFHTNHTHEATLKCPFLRQDRHNLWKVGFIVCRASYRITLSTS # AVDNLPLFHPPLHYFSKYVLVMKYLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g971 ### # start gene g972 Scaffold_1 AUGUSTUS gene 4607054 4607407 0.59 + . g972 Scaffold_1 AUGUSTUS transcript 4607054 4607407 0.59 + . g972.t1 Scaffold_1 AUGUSTUS start_codon 4607054 4607056 . + 0 transcript_id "g972.t1"; gene_id "g972"; Scaffold_1 AUGUSTUS CDS 4607054 4607407 0.59 + 0 transcript_id "g972.t1"; gene_id "g972"; Scaffold_1 AUGUSTUS stop_codon 4607405 4607407 . + 0 transcript_id "g972.t1"; gene_id "g972"; # protein sequence = [MQPLFLGLDLSTQQLKAVLVREDHSILHESSVRFDQDLPSYETENGALKGPAEGEVTSPVAMWLDAFELLAERMKQAG # VDFGSIAAISGAGQVYECVSVKRLPSNKSSATWLRFLVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g972 ### # start gene g973 Scaffold_1 AUGUSTUS gene 4608265 4608924 0.68 + . g973 Scaffold_1 AUGUSTUS transcript 4608265 4608924 0.68 + . g973.t1 Scaffold_1 AUGUSTUS start_codon 4608265 4608267 . + 0 transcript_id "g973.t1"; gene_id "g973"; Scaffold_1 AUGUSTUS CDS 4608265 4608924 0.68 + 0 transcript_id "g973.t1"; gene_id "g973"; Scaffold_1 AUGUSTUS stop_codon 4608922 4608924 . + 0 transcript_id "g973.t1"; gene_id "g973"; # protein sequence = [MLCYKNGALAREQVRDKYTDSDWSNYNTLVDSGNPGCDGYMGLYFPLPEIIPPGVKGEFFFRNGRSVPPVQVTEEEVP # QAFQPRMILESQFLSIRSRIAAILPPDSPPLQRLVVTGGSSANHTIRQLAADLFNMKVYVSTTKEAAGMGGALLAKYAWWKQNGNSKGTFEEMNAMME # GESTGMKCVAEPREEVAMQYDGLVASYTACEEEVVKIWATKDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g973 ### # start gene g974 Scaffold_1 AUGUSTUS gene 4610819 4611328 0.99 + . g974 Scaffold_1 AUGUSTUS transcript 4610819 4611328 0.99 + . g974.t1 Scaffold_1 AUGUSTUS start_codon 4610819 4610821 . + 0 transcript_id "g974.t1"; gene_id "g974"; Scaffold_1 AUGUSTUS CDS 4610819 4611328 0.99 + 0 transcript_id "g974.t1"; gene_id "g974"; Scaffold_1 AUGUSTUS stop_codon 4611326 4611328 . + 0 transcript_id "g974.t1"; gene_id "g974"; # protein sequence = [MPALGLLLEYPVFTGYNTRIAKKLAPSDPDYREPIDFENYSEEMNSFKQQYIYDNMRSIEDRKGLYVLYFSGFSALTD # TEKGSTAGIRSIDSYKGNDFLYLNPKGIIPPEAIIKKGERRQDPFRERKVFNLTSFAEDDSEKVQVEELTDEANEDAEESLTKQQLEEAEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g974 ### # start gene g975 Scaffold_1 AUGUSTUS gene 4615938 4616297 0.99 + . g975 Scaffold_1 AUGUSTUS transcript 4615938 4616297 0.99 + . g975.t1 Scaffold_1 AUGUSTUS start_codon 4615938 4615940 . + 0 transcript_id "g975.t1"; gene_id "g975"; Scaffold_1 AUGUSTUS CDS 4615938 4616297 0.99 + 0 transcript_id "g975.t1"; gene_id "g975"; Scaffold_1 AUGUSTUS stop_codon 4616295 4616297 . + 0 transcript_id "g975.t1"; gene_id "g975"; # protein sequence = [MLIKNIDENLVNGSMGRVVRFCDPATYGDHEDPSRTASNSKPVSSSSKPAPTAKVPQLLPVVEFVMPNGSHKEMLVIP # ESFKVELPNGEIQAARSQVSLIYLTATDTFDDICKFHPSCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g975 ### # start gene g976 Scaffold_1 AUGUSTUS gene 4627068 4627934 0.87 + . g976 Scaffold_1 AUGUSTUS transcript 4627068 4627934 0.87 + . g976.t1 Scaffold_1 AUGUSTUS start_codon 4627068 4627070 . + 0 transcript_id "g976.t1"; gene_id "g976"; Scaffold_1 AUGUSTUS CDS 4627068 4627934 0.87 + 0 transcript_id "g976.t1"; gene_id "g976"; Scaffold_1 AUGUSTUS stop_codon 4627932 4627934 . + 0 transcript_id "g976.t1"; gene_id "g976"; # protein sequence = [MSLALGTPLHPMYRRMLPLLDTLSNDIPDTIIPIVVTSTHAIPSTRFSEAHLPAILSSHLLYLVPSASQNLPPSPSTS # TIHDATMQPQRPLDSHLHPVDGEEHSPTDDAHRSTFMGMGMPNMDVGKWGWLNFGKNGKKPTKGGQDEAEPNTIDNPDTAREEILRSPDGAVDQSALD # DAISSKGVMTNDLDATELKYVVDKEYFTTAELDDIESDIIPNPSTPSDSPSPFSLLPQEFTSTIVHLAEDPHSSNTRERKIYYLTVGFSSSLPCLFSP # SVPRNIPSCSLSST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g976 ### # start gene g977 Scaffold_1 AUGUSTUS gene 4629408 4630031 0.7 + . g977 Scaffold_1 AUGUSTUS transcript 4629408 4630031 0.7 + . g977.t1 Scaffold_1 AUGUSTUS start_codon 4629408 4629410 . + 0 transcript_id "g977.t1"; gene_id "g977"; Scaffold_1 AUGUSTUS CDS 4629408 4630031 0.7 + 0 transcript_id "g977.t1"; gene_id "g977"; Scaffold_1 AUGUSTUS stop_codon 4630029 4630031 . + 0 transcript_id "g977.t1"; gene_id "g977"; # protein sequence = [MYQHDPSKIAICWNFLQENCPNTADTCNLSHDPTPERTPLCLHFLNKGRCTRPNCLFPHVNVGARHGVCRDFAVLGYC # GKGLDCDKQHVRECPDFAEKGGCSTKGCKLPHVIRANRNRKPPSLVSSDGSSSSTVVSGLVDLADSQGESRMQHVAANDAQLGDEYISLTFNESESEE # ESDSEEEENDEEGVEEGDDPDDVSDMLPVVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g977 ### # start gene g978 Scaffold_1 AUGUSTUS gene 4631341 4631677 0.46 + . g978 Scaffold_1 AUGUSTUS transcript 4631341 4631677 0.46 + . g978.t1 Scaffold_1 AUGUSTUS start_codon 4631341 4631343 . + 0 transcript_id "g978.t1"; gene_id "g978"; Scaffold_1 AUGUSTUS CDS 4631341 4631343 0.99 + 0 transcript_id "g978.t1"; gene_id "g978"; Scaffold_1 AUGUSTUS CDS 4631501 4631677 0.46 + 0 transcript_id "g978.t1"; gene_id "g978"; Scaffold_1 AUGUSTUS stop_codon 4631675 4631677 . + 0 transcript_id "g978.t1"; gene_id "g978"; # protein sequence = [MDDNAPLVRHDDGTYDVMSVISVSGETPADVGAFVETWESQTISGIVAQWFVGAADCVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g978 ### # start gene g979 Scaffold_1 AUGUSTUS gene 4632217 4633524 0.5 + . g979 Scaffold_1 AUGUSTUS transcript 4632217 4633524 0.5 + . g979.t1 Scaffold_1 AUGUSTUS start_codon 4632217 4632219 . + 0 transcript_id "g979.t1"; gene_id "g979"; Scaffold_1 AUGUSTUS CDS 4632217 4632749 0.53 + 0 transcript_id "g979.t1"; gene_id "g979"; Scaffold_1 AUGUSTUS CDS 4632813 4633524 0.87 + 1 transcript_id "g979.t1"; gene_id "g979"; Scaffold_1 AUGUSTUS stop_codon 4633522 4633524 . + 0 transcript_id "g979.t1"; gene_id "g979"; # protein sequence = [MTIQDLPSVLDSPTSVSSISSSSTTTISSRKRQRSTSANSATEESLKRGSPRPQIDPLSIGEAKNMVEDSEMDSYMQE # QGHIGPSSADKLTRIAELQRTPLALNQTWFLVDRAWCCRWRAALGEIDPKSNEATISESQLGPPSTSALIDEFGNLKPGLVEDVDFELFPNEAWSLLV # SWYGEPPTSLRRNTIARGYNQSTIAVELHPPKFYIFRLTKEDEIDEAYISSPSETSLPATITLSAHATLKDLHRESVSILHTGIASNLPQSRLWRLNE # SSASHLSRQLPMSKFSAIELLDTTINGSKTLEEALFQSQDSFALEFQDITTREWLVKSEIEETTPEPLFKSNDAFFNRMSGASSSSLFSNSQSNGDAR # AEVNEKLSVVSKKEKPKEKWIEPGTLGLGNMSVFLDSDSVGH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g979 ### # start gene g980 Scaffold_1 AUGUSTUS gene 4633558 4634223 0.35 + . g980 Scaffold_1 AUGUSTUS transcript 4633558 4634223 0.35 + . g980.t1 Scaffold_1 AUGUSTUS start_codon 4633558 4633560 . + 0 transcript_id "g980.t1"; gene_id "g980"; Scaffold_1 AUGUSTUS CDS 4633558 4634223 0.35 + 0 transcript_id "g980.t1"; gene_id "g980"; Scaffold_1 AUGUSTUS stop_codon 4634221 4634223 . + 0 transcript_id "g980.t1"; gene_id "g980"; # protein sequence = [MNSAIQCLGHQKELTEYFLTGVYSRELNPDNPLGMGGAIAEGFGALLTRMWAGSELAHTYGALDKLREGSGGMGAKNK # VSKFFKNTSNFSNNFGGSGDGATLNPSATSYSPRDFKSQLSRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWFGARPPVLHPFRER # RTAEIDGEEEDKDECAQRKSMKLRNARSTFRSMGGTKTWKTIKRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g980 ### # start gene g981 Scaffold_1 AUGUSTUS gene 4634629 4636905 0.47 + . g981 Scaffold_1 AUGUSTUS transcript 4634629 4636905 0.47 + . g981.t1 Scaffold_1 AUGUSTUS start_codon 4634629 4634631 . + 0 transcript_id "g981.t1"; gene_id "g981"; Scaffold_1 AUGUSTUS CDS 4634629 4634645 0.48 + 0 transcript_id "g981.t1"; gene_id "g981"; Scaffold_1 AUGUSTUS CDS 4634724 4636905 0.86 + 1 transcript_id "g981.t1"; gene_id "g981"; Scaffold_1 AUGUSTUS stop_codon 4636903 4636905 . + 0 transcript_id "g981.t1"; gene_id "g981"; # protein sequence = [MHYPKTHHFYKNLDDSILCGEIGDNDTIICFELPCNSQQSRTWKRSDHPNAPWVLPLLLCDAPPTSFSTNAFSKTYGN # HRLGNNLFGYPTIVVVTAEQAKSVEGIYGAAVERLARWTRQERDLWTWELPDGFPISVIDEKVETVTLNVMDEDGLETVTEISEDGAVVNVTQPVPAR # QQPTPLLTPEEGDIVDEKSMVLDIGEDTLESGLKSAVPIRLGPKKDIFTLRLSTGQKDYGTSGYTSTPVSWESRIEEAEKTALTNPESAVGGLLKEHD # VLYCEFDENMKSYYFGEERSFPKYEHALWEIWDEYLHPEYQDSVKSAASKSSRGISLSDCLDEFTKEEQLGADDLWYCPQCKKHQQATKKFDLWSTPD # VLVVHLKRFSNSRMLRDKIDAFVDFPILGLDMNERVNERRVISSLERMGVDTDSVELLGRGSEGGSGPTSEPLIYDLFAVDEHLGGLGGGHYRAYAFN # HMNNKWYHFDDSFVSESTADNAVVRLDWCLFVVWYTNPFSLAECKCLSSVLPSSLLVTLGWTKPRTCRAGLRSPTQIVSSTSDDETNDAPSDVIGVSP # MHTDIQLPTPPSEVDTLPSYLNDSPTSSLGAGFTMTNWQSSQSSHFRSGVPTDDEGEYEQSPFLGIFNDVDISSVLPPSSLADSSPSSSVGVEPDFDT # DLRSDDLNDLDGEGEDDDDEGPWSSEARARSMTLETEGEVRETSPAWSVSAHSASQRSSEVASPDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g981 ### # start gene g982 Scaffold_1 AUGUSTUS gene 4642406 4642834 0.73 - . g982 Scaffold_1 AUGUSTUS transcript 4642406 4642834 0.73 - . g982.t1 Scaffold_1 AUGUSTUS stop_codon 4642406 4642408 . - 0 transcript_id "g982.t1"; gene_id "g982"; Scaffold_1 AUGUSTUS CDS 4642406 4642834 0.73 - 0 transcript_id "g982.t1"; gene_id "g982"; Scaffold_1 AUGUSTUS start_codon 4642832 4642834 . - 0 transcript_id "g982.t1"; gene_id "g982"; # protein sequence = [MYTTIAFITFITFVVGSNSFYPTSDAACVFSLIPRSTANSLIQQELQILSIAFNLIIIRISAHPSGSDDHSTSVQSAP # QTFPLRKFSSAPKSTNESTQIESDPYRTGMNKPQQESFLEVEEGNWAQSLTVKPQALDMEITDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g982 ### # start gene g983 Scaffold_1 AUGUSTUS gene 4645568 4646975 0.56 - . g983 Scaffold_1 AUGUSTUS transcript 4645568 4646975 0.56 - . g983.t1 Scaffold_1 AUGUSTUS stop_codon 4645568 4645570 . - 0 transcript_id "g983.t1"; gene_id "g983"; Scaffold_1 AUGUSTUS CDS 4645568 4646684 0.99 - 1 transcript_id "g983.t1"; gene_id "g983"; Scaffold_1 AUGUSTUS CDS 4646737 4646975 0.56 - 0 transcript_id "g983.t1"; gene_id "g983"; Scaffold_1 AUGUSTUS start_codon 4646973 4646975 . - 0 transcript_id "g983.t1"; gene_id "g983"; # protein sequence = [MEFYLVDDLECDLIVFHPYRTLLALCNKDFGNSNSSSDSPAEEAEAGELGTGIGADDGPRYWGTGQGQLELSEGGLQT # AWFIINDTYRSELCLIYPPHLIAVTAIYLTLVLHTPTQNSIAHLLPYSPAFNSDSSNSGEPSQTTPHPRRSSRTSDSSSKHANQQDPIDFLANLNVSL # SAIATIAQEIISMYSLWNRYREDVTAEEMRNMNANANMGKRNAAGNFKSTMKGARVSQSMQSQKNLPRNVSASAATTSDMEWQLERQRFHGAIQLQAH # LKKQGYASAPLPPQHMINGPYFMPQHPQQMQHRYPPALVPVSLGSLSPTKRSATGLRSRSGSRAGTPNSVGGGGGRMEDLFGDGTSSGSPASHTSHAA # GVGPRAGSTPLGNTPGSIGGADDTANSPINPWPFGQGRIVTAIFLSSMLNTMREARMNDMAHPSSGRPVVVNRMLERTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g983 ### # start gene g984 Scaffold_1 AUGUSTUS gene 4648671 4649126 0.67 + . g984 Scaffold_1 AUGUSTUS transcript 4648671 4649126 0.67 + . g984.t1 Scaffold_1 AUGUSTUS start_codon 4648671 4648673 . + 0 transcript_id "g984.t1"; gene_id "g984"; Scaffold_1 AUGUSTUS CDS 4648671 4649126 0.67 + 0 transcript_id "g984.t1"; gene_id "g984"; Scaffold_1 AUGUSTUS stop_codon 4649124 4649126 . + 0 transcript_id "g984.t1"; gene_id "g984"; # protein sequence = [MTFGYGAGAMPDGYSDLVLETQEAEDCLIPMGITSENVAADYNISREAQDTFAALSFQKAAAAQKAHLFDPEILPIRV # KQVSPDGGKQFLVDADDGIRDGVTVQSLGKLKPAFKKDGSTHAGNASQVSDGAAAVLFGKEERCEEAWVADCG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g984 ### # start gene g985 Scaffold_1 AUGUSTUS gene 4666502 4666902 0.43 + . g985 Scaffold_1 AUGUSTUS transcript 4666502 4666902 0.43 + . g985.t1 Scaffold_1 AUGUSTUS start_codon 4666502 4666504 . + 0 transcript_id "g985.t1"; gene_id "g985"; Scaffold_1 AUGUSTUS CDS 4666502 4666653 0.5 + 0 transcript_id "g985.t1"; gene_id "g985"; Scaffold_1 AUGUSTUS CDS 4666743 4666902 0.46 + 1 transcript_id "g985.t1"; gene_id "g985"; Scaffold_1 AUGUSTUS stop_codon 4666900 4666902 . + 0 transcript_id "g985.t1"; gene_id "g985"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTGSAKEWFVPDILDPDLDSLPAWTSSFK # ALVKELQDNFGVYDAQGEAEDSLGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g985 ### # start gene g986 Scaffold_1 AUGUSTUS gene 4670359 4670793 0.81 + . g986 Scaffold_1 AUGUSTUS transcript 4670359 4670793 0.81 + . g986.t1 Scaffold_1 AUGUSTUS start_codon 4670359 4670361 . + 0 transcript_id "g986.t1"; gene_id "g986"; Scaffold_1 AUGUSTUS CDS 4670359 4670793 0.81 + 0 transcript_id "g986.t1"; gene_id "g986"; Scaffold_1 AUGUSTUS stop_codon 4670791 4670793 . + 0 transcript_id "g986.t1"; gene_id "g986"; # protein sequence = [MDFIEQLPMSNGYSYLVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKAL # SMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g986 ### # start gene g987 Scaffold_1 AUGUSTUS gene 4675854 4676488 0.39 + . g987 Scaffold_1 AUGUSTUS transcript 4675854 4676488 0.39 + . g987.t1 Scaffold_1 AUGUSTUS start_codon 4675854 4675856 . + 0 transcript_id "g987.t1"; gene_id "g987"; Scaffold_1 AUGUSTUS CDS 4675854 4676142 0.52 + 0 transcript_id "g987.t1"; gene_id "g987"; Scaffold_1 AUGUSTUS CDS 4676226 4676488 0.69 + 2 transcript_id "g987.t1"; gene_id "g987"; Scaffold_1 AUGUSTUS stop_codon 4676486 4676488 . + 0 transcript_id "g987.t1"; gene_id "g987"; # protein sequence = [MPPKTRAQSRANSEENTFSPQPNHLPHSLTLFAIGQPCRRNRGFGPATVPTMLTLPEAMEEDQQFEYSTLYTGDGQPV # QVLTPHRGQPPWSLRLGAESPRDPPPHFDLDAGDHDDQDPPVDPEDPGADNNNDDLDDDSGGLPRGEPGDPGVPADLVVLVPHSLWHPQRATCYVGTS # LGIQGFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g987 ### # start gene g988 Scaffold_1 AUGUSTUS gene 4684711 4686459 0.22 - . g988 Scaffold_1 AUGUSTUS transcript 4684711 4686459 0.22 - . g988.t1 Scaffold_1 AUGUSTUS stop_codon 4684711 4684713 . - 0 transcript_id "g988.t1"; gene_id "g988"; Scaffold_1 AUGUSTUS CDS 4684711 4685279 0.36 - 2 transcript_id "g988.t1"; gene_id "g988"; Scaffold_1 AUGUSTUS CDS 4685880 4686459 0.22 - 0 transcript_id "g988.t1"; gene_id "g988"; Scaffold_1 AUGUSTUS start_codon 4686457 4686459 . - 0 transcript_id "g988.t1"; gene_id "g988"; # protein sequence = [MSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAED # INLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVK # WKGYDAGHNSWEPAANLKEDDGESHIYDPEWENAMQAQVPATIDNDILQEIDTCNDISQEALDIIEATAQRGFYKGEFDSSSQKQLQNSYLNCTHVAT # LLNKEAAENSINNIMREKECLIKRRLEDAIRKPNSQLHHCLPTSHIPSPFATELNREIEHAQELFMKFHPNSSAWDELKFSQQLAIALIHKYKFNDAS # IWKTKHCDLW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g988 ### # start gene g989 Scaffold_1 AUGUSTUS gene 4688094 4689527 0.81 - . g989 Scaffold_1 AUGUSTUS transcript 4688094 4689527 0.81 - . g989.t1 Scaffold_1 AUGUSTUS stop_codon 4688094 4688096 . - 0 transcript_id "g989.t1"; gene_id "g989"; Scaffold_1 AUGUSTUS CDS 4688094 4689527 0.81 - 0 transcript_id "g989.t1"; gene_id "g989"; Scaffold_1 AUGUSTUS start_codon 4689525 4689527 . - 0 transcript_id "g989.t1"; gene_id "g989"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g989 ### # start gene g990 Scaffold_1 AUGUSTUS gene 4689578 4690744 0.91 - . g990 Scaffold_1 AUGUSTUS transcript 4689578 4690744 0.91 - . g990.t1 Scaffold_1 AUGUSTUS stop_codon 4689578 4689580 . - 0 transcript_id "g990.t1"; gene_id "g990"; Scaffold_1 AUGUSTUS CDS 4689578 4690744 0.91 - 0 transcript_id "g990.t1"; gene_id "g990"; Scaffold_1 AUGUSTUS start_codon 4690742 4690744 . - 0 transcript_id "g990.t1"; gene_id "g990"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g990 ### # start gene g991 Scaffold_1 AUGUSTUS gene 4693966 4694643 0.67 + . g991 Scaffold_1 AUGUSTUS transcript 4693966 4694643 0.67 + . g991.t1 Scaffold_1 AUGUSTUS start_codon 4693966 4693968 . + 0 transcript_id "g991.t1"; gene_id "g991"; Scaffold_1 AUGUSTUS CDS 4693966 4694643 0.67 + 0 transcript_id "g991.t1"; gene_id "g991"; Scaffold_1 AUGUSTUS stop_codon 4694641 4694643 . + 0 transcript_id "g991.t1"; gene_id "g991"; # protein sequence = [MLLEQLSTSSRKIAELTTTLLYQQGIVDESNALATRQRVRLEELQEEVHRSRGCAAFVEQMIQEYPDEGFYEVVLPPL # SELEGELVNIRADLRRVATLAHRLYRSDPATVLHHHDRYIGAIIEAVVAFLRRGLDSDDPDVAAHNFRLALDYMQSARGIHGDLYMRSISSIQWFFHN # AVDQDEGLYRLVLEHSRFDNDGPFLTASQHAGFVAPPPTRWSLLFTAAC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g991 ### # start gene g992 Scaffold_1 AUGUSTUS gene 4696768 4697855 0.18 - . g992 Scaffold_1 AUGUSTUS transcript 4696768 4697855 0.18 - . g992.t1 Scaffold_1 AUGUSTUS stop_codon 4696768 4696770 . - 0 transcript_id "g992.t1"; gene_id "g992"; Scaffold_1 AUGUSTUS CDS 4696768 4697514 0.94 - 0 transcript_id "g992.t1"; gene_id "g992"; Scaffold_1 AUGUSTUS CDS 4697586 4697855 0.18 - 0 transcript_id "g992.t1"; gene_id "g992"; Scaffold_1 AUGUSTUS start_codon 4697853 4697855 . - 0 transcript_id "g992.t1"; gene_id "g992"; # protein sequence = [MPPSAFQFFMNEIFHDMVDVCVVIYLDDILIYSDDEESHVEHVRKVLERLRANHLHAKPEKCAFHVDTVEYLGVIISP # LGVSMDPEKVKAEVHRQLLGNHQGVHEAPPKRFSVELDPQCSSAFELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAFH # ARSMISAELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQARWAELLSGYDFVINYRPGRLGAKPDALTRRSDVYPK # KGASRDQALAGRERVLIPPERLNATILMNEDLLVNRVREAPKDTTIIEALGGLHATRRNVWRKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g992 ### # start gene g993 Scaffold_1 AUGUSTUS gene 4725275 4726318 0.42 + . g993 Scaffold_1 AUGUSTUS transcript 4725275 4726318 0.42 + . g993.t1 Scaffold_1 AUGUSTUS start_codon 4725275 4725277 . + 0 transcript_id "g993.t1"; gene_id "g993"; Scaffold_1 AUGUSTUS CDS 4725275 4726318 0.42 + 0 transcript_id "g993.t1"; gene_id "g993"; Scaffold_1 AUGUSTUS stop_codon 4726316 4726318 . + 0 transcript_id "g993.t1"; gene_id "g993"; # protein sequence = [MRTACRGGESSEGEGEGEGAEESSDNDSDPSRRPSPRIREEDEDDDEDNPIAATSISGIGSDRKAGIGIGFSKAGATS # STIKASSFTSSKGGIGSRTSVTHTPSSDPPSAFTSQTRSASFVRDSTPTVRPAAPLSYAEQAHFAKLSGSFGARILGKMGWKAGQGLGATGEGIVTPI # ESKMRPEKSGIAFRGFKEKTEQSKMEARRRGEVVSDDEDPKIRKAKKKEREVKEKKAEAWRKPRKVKTKIQHKTYEEILAEAGTETSTSAGIGQIIDA # TGAVVSENISGSVSIHSDLHSSLEKSVLWPTSQSTHGLPQWTLHESPKYGIMFVSSRNRARPISMVWHGKVNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g993 ### # start gene g994 Scaffold_1 AUGUSTUS gene 4727359 4728141 0.24 + . g994 Scaffold_1 AUGUSTUS transcript 4727359 4728141 0.24 + . g994.t1 Scaffold_1 AUGUSTUS start_codon 4727359 4727361 . + 0 transcript_id "g994.t1"; gene_id "g994"; Scaffold_1 AUGUSTUS CDS 4727359 4728141 0.24 + 0 transcript_id "g994.t1"; gene_id "g994"; Scaffold_1 AUGUSTUS stop_codon 4728139 4728141 . + 0 transcript_id "g994.t1"; gene_id "g994"; # protein sequence = [MQVFDANDWDSMLLKYIVPKLGATLRSDLRINPRNQSMEPIHYVLQWSSILRPSILSQLFETEFFPKWIEVLHLWLIQ # PKVSFEEVAQWYSFWKGSFPENIQSVSGISRGFTRGLQLMNQAIELGPDAPSQLPKPDYRAEQAQHALTNSPYPRLSNNGGRAKTNASSSLRPSARTQ # EITFRSIVEEYTASHDLLFVPTGRAHEKSRMPLFRITPSMDGKGGLLVYILDDAVWAALEGAGGPAEEYRAISLDEVVLRATKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g994 ### # start gene g995 Scaffold_1 AUGUSTUS gene 4731762 4732718 0.31 + . g995 Scaffold_1 AUGUSTUS transcript 4731762 4732718 0.31 + . g995.t1 Scaffold_1 AUGUSTUS start_codon 4731762 4731764 . + 0 transcript_id "g995.t1"; gene_id "g995"; Scaffold_1 AUGUSTUS CDS 4731762 4732074 0.56 + 0 transcript_id "g995.t1"; gene_id "g995"; Scaffold_1 AUGUSTUS CDS 4732228 4732549 0.48 + 2 transcript_id "g995.t1"; gene_id "g995"; Scaffold_1 AUGUSTUS CDS 4732697 4732718 0.44 + 1 transcript_id "g995.t1"; gene_id "g995"; Scaffold_1 AUGUSTUS stop_codon 4732716 4732718 . + 0 transcript_id "g995.t1"; gene_id "g995"; # protein sequence = [MTFLTDLATNGTEKGVGFVFFSGNDDSLIAHRGTEGAYYFTMLLSISRVPESVFSGDHSCHSGEAQSYEYSSKLNSSS # TFDTSAEYYVRRYSRLHAEARYPLDRCQVFLQQFVFGTNTTGLVTGSTVTGGEDPELAEDVMPGSDPIFYGSLSTESSTIWPEATRAAWTSFIQTETA # SVTTTPISTSIAVSSTSGAVRRTVPCYIFTGLTMLFEKTFAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g995 ### # start gene g996 Scaffold_1 AUGUSTUS gene 4734073 4734369 0.54 + . g996 Scaffold_1 AUGUSTUS transcript 4734073 4734369 0.54 + . g996.t1 Scaffold_1 AUGUSTUS start_codon 4734073 4734075 . + 0 transcript_id "g996.t1"; gene_id "g996"; Scaffold_1 AUGUSTUS CDS 4734073 4734369 0.54 + 0 transcript_id "g996.t1"; gene_id "g996"; Scaffold_1 AUGUSTUS stop_codon 4734367 4734369 . + 0 transcript_id "g996.t1"; gene_id "g996"; # protein sequence = [MLFKSLAALASLSLLSLASAWEIFMYETTAGGDPENCNGGGTTVSGTGSVCQLAAPNTVAMQVINDPEGCECKSKPRY # HVAYIIDDGIYVIVEVFTGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g996 ### # start gene g997 Scaffold_1 AUGUSTUS gene 4738140 4739125 0.77 - . g997 Scaffold_1 AUGUSTUS transcript 4738140 4739125 0.77 - . g997.t1 Scaffold_1 AUGUSTUS stop_codon 4738140 4738142 . - 0 transcript_id "g997.t1"; gene_id "g997"; Scaffold_1 AUGUSTUS CDS 4738140 4738616 0.82 - 0 transcript_id "g997.t1"; gene_id "g997"; Scaffold_1 AUGUSTUS CDS 4738748 4739125 0.78 - 0 transcript_id "g997.t1"; gene_id "g997"; Scaffold_1 AUGUSTUS start_codon 4739123 4739125 . - 0 transcript_id "g997.t1"; gene_id "g997"; # protein sequence = [MKVGWNPKLSARASNYGTRIDYILATPGLLPWIKVADIEPTIKGSDHCPVWIDLQDKISLSGRGNSTLKLRDVMSCPT # PDKPDREPLRLATRFWDEYSGKQRLLASFFNTGSAGDKIKPKVVAAKAPVSMSSSLISIAYVSSFPTSSGASTPTSTSSQSNSLKKRKTPPPSTSSST # AGTSSSSSAIQTKPKKPKGDVQNVKDLKKPRQSKLSSFFVAPPTTQDTSNSTAKNSITSKIKPRRSESITNLADTGTQVIVDLTASNDKDDKYPVAQT # VQEVEEEVID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g997 ### # start gene g998 Scaffold_1 AUGUSTUS gene 4740370 4742032 0.64 + . g998 Scaffold_1 AUGUSTUS transcript 4740370 4742032 0.64 + . g998.t1 Scaffold_1 AUGUSTUS start_codon 4740370 4740372 . + 0 transcript_id "g998.t1"; gene_id "g998"; Scaffold_1 AUGUSTUS CDS 4740370 4740882 0.64 + 0 transcript_id "g998.t1"; gene_id "g998"; Scaffold_1 AUGUSTUS CDS 4740971 4742032 0.98 + 0 transcript_id "g998.t1"; gene_id "g998"; Scaffold_1 AUGUSTUS stop_codon 4742030 4742032 . + 0 transcript_id "g998.t1"; gene_id "g998"; # protein sequence = [MELALRRKKILVASPLPTSLTTALPTALTTALTTALSTALTTALRPHHDRTHDPTPDRTHDRTPDRTHDRTPNRTPNR # APNCPHDFAPNRTHDFAPNRTHDFAPNRTHDFAPNRACNFAPNCAHNSTPNWAHELHSQSAYDSTPNRARNPSTTPLTPPILTPSTTTLTEPREAARE # AAYDCRGHVSTPSRSHISDCESSYEHPLNSSQASVYSSTHARYLCDSQDTAQDPALKSNEAFPNDQGEAEEGLLLANTIFPSPSEADDESLLDHDTLL # ADSHQQDADDPNPLLDELLEELLNDNRHYQEKMILCSDLDAAILSLLEDEGSRPLVNSPTHQTGFSPSHFATSNEDPGSRKRRRLRDSLGEEVQVEVV # EPRVAQANPFDPRPDCNRNGASASRKRPRVNHLLNLDFGEEEEQLGGEEENTGPQFLYEASDRPHAPPKEVTDASLGLMLRLTGGAGWGTDVWAEDIR # RIVACVDWEEASGALSSYSLLHLAQRCSRAEKIDTGATFIRMIYELFLAAKVNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g998 ### # start gene g999 Scaffold_1 AUGUSTUS gene 4742172 4743192 0.35 + . g999 Scaffold_1 AUGUSTUS transcript 4742172 4743192 0.35 + . g999.t1 Scaffold_1 AUGUSTUS start_codon 4742172 4742174 . + 0 transcript_id "g999.t1"; gene_id "g999"; Scaffold_1 AUGUSTUS CDS 4742172 4742227 0.36 + 0 transcript_id "g999.t1"; gene_id "g999"; Scaffold_1 AUGUSTUS CDS 4742694 4743192 0.8 + 1 transcript_id "g999.t1"; gene_id "g999"; Scaffold_1 AUGUSTUS stop_codon 4743190 4743192 . + 0 transcript_id "g999.t1"; gene_id "g999"; # protein sequence = [MHNWLNAGSRWGRLASAGKASFNLDRQQEIWEPILSFLPEEGEDPISFNELGTRYLTQSSGFEDFEALELGLESDSDY # LKKVEEFSTLENQFASTYVGNSEEGTILQLKSWFREDSIPKSNPFPAKISSRKTWTEEKRAAASKAISPENLEELAEKVSLYWALPDLFADFNLADGS # IRQSLRKD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g999 ### # start gene g1000 Scaffold_1 AUGUSTUS gene 4747322 4748004 0.15 + . g1000 Scaffold_1 AUGUSTUS transcript 4747322 4748004 0.15 + . g1000.t1 Scaffold_1 AUGUSTUS start_codon 4747322 4747324 . + 0 transcript_id "g1000.t1"; gene_id "g1000"; Scaffold_1 AUGUSTUS CDS 4747322 4747514 0.8 + 0 transcript_id "g1000.t1"; gene_id "g1000"; Scaffold_1 AUGUSTUS CDS 4747573 4747693 0.25 + 2 transcript_id "g1000.t1"; gene_id "g1000"; Scaffold_1 AUGUSTUS CDS 4747890 4748004 0.44 + 1 transcript_id "g1000.t1"; gene_id "g1000"; Scaffold_1 AUGUSTUS stop_codon 4748002 4748004 . + 0 transcript_id "g1000.t1"; gene_id "g1000"; # protein sequence = [MAKKDRKGKGKALFFLASDSGSSESSNELEPESPPALSSTQKLKRKRSSVDDEALEERNSKRHKTKEYVEISDLDEND # AKVRFTDSEDQEASSEGGKDQGTVQFFSGSSSGSSTASSEQDVAKDKDNEDDDDDEEDSWDNWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1000 ### # start gene g1001 Scaffold_1 AUGUSTUS gene 4754228 4756536 0.59 - . g1001 Scaffold_1 AUGUSTUS transcript 4754228 4756536 0.59 - . g1001.t1 Scaffold_1 AUGUSTUS stop_codon 4754228 4754230 . - 0 transcript_id "g1001.t1"; gene_id "g1001"; Scaffold_1 AUGUSTUS CDS 4754228 4755487 1 - 0 transcript_id "g1001.t1"; gene_id "g1001"; Scaffold_1 AUGUSTUS CDS 4755555 4755698 0.6 - 0 transcript_id "g1001.t1"; gene_id "g1001"; Scaffold_1 AUGUSTUS CDS 4756213 4756536 1 - 0 transcript_id "g1001.t1"; gene_id "g1001"; Scaffold_1 AUGUSTUS start_codon 4756534 4756536 . - 0 transcript_id "g1001.t1"; gene_id "g1001"; # protein sequence = [MHITRQRNTDWKTFAPSALPGSETFAAQSSLPKLPVPELSGTLSYLKESLKPIAWNEAEYRAVVSKIDEFGARIGPEL # QKRLLKRQAETDHWLERWWDDGAYLGYRESRGELTQNHVVEFINQAHPSQIKYIYENTTQSYSGVGILTASNRDVWAKDYAELVTSEHNSDILDTIHS # SAFIICLEEGAPSSPEQNSRVLWHGHFSNGQAVGLQNRWVDKPCQFIVYDNMYAGFMGEHSIMDGTPTVRLCDEVLDALASPSFDHGVKPSGQPAIPP # TPLDWEISAATAQAIMTANAAALDLINSQVLSYYLTPYGKDEIKKFGVSPDSWAQMIIQLAYRRTIGNENRKGGTYEAATTRKFYKGRTEAIRVVTSE # SDAWVESMDNPNASNATRKELFNLATKKHVALAKLCGAGQGIDRHILGMLLLPVFEDISRNSAGLKKLLAESEETPALFSDPVFTRSSYWVLSTSAIF # SKHFNAYGWGEVVPDGFGVAYMTGHNGLFCTLAYFTVITDRLDFLNFIPQIVCSTLLHLGRKCLTPNLLMRLLQQLGTYTTYTKPLARRKRNYRYIDR # ITCSCCI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1001 ### # start gene g1002 Scaffold_1 AUGUSTUS gene 4757145 4758343 0.33 + . g1002 Scaffold_1 AUGUSTUS transcript 4757145 4758343 0.33 + . g1002.t1 Scaffold_1 AUGUSTUS start_codon 4757145 4757147 . + 0 transcript_id "g1002.t1"; gene_id "g1002"; Scaffold_1 AUGUSTUS CDS 4757145 4757760 0.44 + 0 transcript_id "g1002.t1"; gene_id "g1002"; Scaffold_1 AUGUSTUS CDS 4757811 4758343 0.59 + 2 transcript_id "g1002.t1"; gene_id "g1002"; Scaffold_1 AUGUSTUS stop_codon 4758341 4758343 . + 0 transcript_id "g1002.t1"; gene_id "g1002"; # protein sequence = [MGPRQPPAPDKRNAAYESIFGRPSASHHHQSPVPTVQPPYPPQTNYYYQQQPQSYQQNAVDRRTSFQQYHHSPSLYTN # PTYNSSNIPPNAYPRYTPSSYNYTPSLAPPSVSIRARSIHSSTNGPGIIAPKPEEPPDPSLEALTKSGLTPAQAYQAQIYRNSTPSSLPAVESDDGRL # GIDFAAESNSSDQSTDDSSELPWARKESPRTMSSLPQRNSTTNISHNRHSHASTNHSLHVDTASAQSIRSSVASTSPSSFSLADNNSLSMETATTSTG # RRSSESAHIHRVTGNARREKSAQDRSMSMSAATNSMRAVLASRVPIPGLPEGASLMVIYEACSTPIDLIHRAPFSHLYQNSHTQNANSLPSVAFTSRG # SVSGPHSTRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1002 ### # start gene g1003 Scaffold_1 AUGUSTUS gene 4759901 4760712 0.29 + . g1003 Scaffold_1 AUGUSTUS transcript 4759901 4760712 0.29 + . g1003.t1 Scaffold_1 AUGUSTUS start_codon 4759901 4759903 . + 0 transcript_id "g1003.t1"; gene_id "g1003"; Scaffold_1 AUGUSTUS CDS 4759901 4760026 0.29 + 0 transcript_id "g1003.t1"; gene_id "g1003"; Scaffold_1 AUGUSTUS CDS 4760095 4760712 0.84 + 0 transcript_id "g1003.t1"; gene_id "g1003"; Scaffold_1 AUGUSTUS stop_codon 4760710 4760712 . + 0 transcript_id "g1003.t1"; gene_id "g1003"; # protein sequence = [MIYKGPLNKRDGELQVYLFDHALLFTKVVKTKQHEFYKVYRPPIPLELLLVSASDDASPNGNGHNTLRGNRRQGLVKK # NSFSRDSRSSPNFTVPPVHVKTDAKGQFWINFVHLGRKYYNLVLWANSNLNQKKWLENIYKQQQAIKERSNIFETVSLSEGFFNNPNKVNCAAPFSKW # IIRFIALEESGLIGSTCLGGGRKIAYGTDDGVYFSDLREVNKDPVKVLGLMDVTQIDVLEDYQLLIVLSGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1003 ### # start gene g1004 Scaffold_1 AUGUSTUS gene 4762398 4763687 0.6 + . g1004 Scaffold_1 AUGUSTUS transcript 4762398 4763687 0.6 + . g1004.t1 Scaffold_1 AUGUSTUS start_codon 4762398 4762400 . + 0 transcript_id "g1004.t1"; gene_id "g1004"; Scaffold_1 AUGUSTUS CDS 4762398 4762770 0.97 + 0 transcript_id "g1004.t1"; gene_id "g1004"; Scaffold_1 AUGUSTUS CDS 4762933 4763180 0.99 + 2 transcript_id "g1004.t1"; gene_id "g1004"; Scaffold_1 AUGUSTUS CDS 4763289 4763402 0.62 + 0 transcript_id "g1004.t1"; gene_id "g1004"; Scaffold_1 AUGUSTUS CDS 4763457 4763687 1 + 0 transcript_id "g1004.t1"; gene_id "g1004"; Scaffold_1 AUGUSTUS stop_codon 4763685 4763687 . + 0 transcript_id "g1004.t1"; gene_id "g1004"; # protein sequence = [MKLQPFTVLLAITAANATKINPLHIKRQATASSSVSTATSATVAASSVSSSSGTSATPSSTTGISTGTTTAVGAPASA # TWGTSYPPLSQISSGMPSEVTQAVTTTYTAGASPTYYSGADPLPTPCSSEVQEWMEELDGWDIPDLSPTVDGTCVSDPANVANASARGWWTCGGYTRD # TDITVCPGKPMTWGTRYGQIHFHQSFGLYFINIKATFFDVGSRCIENPNVLIDEYMSGHEIAVHTWSHPHLTTLTTEQIVAELGWTRKAIKTILGVTP # TTMRPPYGDIDDRVRAISLAMGMVPIIWTRTPSGVSFDTFGMFHGSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1004 ### # start gene g1005 Scaffold_1 AUGUSTUS gene 4774363 4775676 0.65 - . g1005 Scaffold_1 AUGUSTUS transcript 4774363 4775676 0.65 - . g1005.t1 Scaffold_1 AUGUSTUS stop_codon 4774363 4774365 . - 0 transcript_id "g1005.t1"; gene_id "g1005"; Scaffold_1 AUGUSTUS CDS 4774363 4775676 0.65 - 0 transcript_id "g1005.t1"; gene_id "g1005"; Scaffold_1 AUGUSTUS start_codon 4775674 4775676 . - 0 transcript_id "g1005.t1"; gene_id "g1005"; # protein sequence = [MLVLQDFEALTPNLLARTVETVEGGGLIVLLLKSMNSLRQLYTMGMDVHARYRTESSGEVKPRFNERFILSLAACPDC # LFLDDELNVLPLSKGKDIEPLPEQNGKGTTRSQENAELRELKNSLEGSVPAGPLVALAKTTDQARALLTFVNSLITPSDPSSSSNPSSSLSSALNTTT # TLLAARGRGKSSALGLALAAAVHTGYANIFLTSPAPENLQTAWEFLFKGLDALGWEEHLDYDILQATHDLSSFGNGVDEAAESNPTLGKGDGGKKPIV # RVNIFRNPTHRQTIQYIDPRDAHVLGQAELLIIDEAAAIPLPVVRNLLGPAMAKGSASAGGYAVWLASTVNGYEGTGRSLSLKLIQQLRDNSSSGPPT # KGDSGKGNSSHGNRTLNEVKLSTPIRYAPGDEVEKWLNTLLCLDVSSSSGKILIVSSISEADAIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1005 ### # start gene g1006 Scaffold_1 AUGUSTUS gene 4776201 4778604 0.27 + . g1006 Scaffold_1 AUGUSTUS transcript 4776201 4778604 0.27 + . g1006.t1 Scaffold_1 AUGUSTUS start_codon 4776201 4776203 . + 0 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS CDS 4776201 4776280 0.74 + 0 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS CDS 4776447 4776620 0.94 + 1 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS CDS 4776694 4777099 0.84 + 1 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS CDS 4777157 4777453 0.97 + 0 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS CDS 4777627 4778604 0.44 + 0 transcript_id "g1006.t1"; gene_id "g1006"; Scaffold_1 AUGUSTUS stop_codon 4778602 4778604 . + 0 transcript_id "g1006.t1"; gene_id "g1006"; # protein sequence = [MASNKPNKLAFLSMPAPASYVAGLGRGEAQARRGEEAEVDPEQFQDPDNEYGLFAGTAYEQDDEEADKIYEAVDAAMD # ARRKARREAQEQAQLAKHRAERPKIQQQFADLKRGLSAVTDEEWESIPEVGNLTKRKRPKYERTYAVSDSILAGDRSRGEYENSLDSLQQQVRIQVSW # ISHRDDSNLVAQTGGLVTPAEAGPTNFVEIGQARDKILSLKLDQVSGTSTSSGLSTSIDPKGYLTSLNSVVLKSDAEIGDIKRARMLFDSLIKSNPKH # APGWIAAACLEEHAGRMVAARKLIKQGCEQCSKNEDVWLEAARLHKGYVPSQIPVFWVELINRPALEHIPNSVRLWKETVNLESSASDARVLLSRAVE # VIPLSVELWLALAQLETLDKAKAVLNKARKAIPTSHEIWIAAGRLLEQEASMMGAEKTKAEKKKALDLVDKTIEAGVRELRRHGVLLTREQWLKEAEK # CETQGSVLTSESIVKATIAMDIEEEDRLDTWIDDAEGALSRNMVGTARAVLAYALKVFPDKKNLWIRAAGLEKAHGTSESLDAILTEAVKHCPQAEVL # WLMAAKERWLAGNVQGARDVLATAFDANKESEKIWLAAVKLEAENGHLDVARELLIRARSTADTERVYHPYLYLHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1006 ### # start gene g1007 Scaffold_1 AUGUSTUS gene 4778730 4779296 0.41 + . g1007 Scaffold_1 AUGUSTUS transcript 4778730 4779296 0.41 + . g1007.t1 Scaffold_1 AUGUSTUS start_codon 4778730 4778732 . + 0 transcript_id "g1007.t1"; gene_id "g1007"; Scaffold_1 AUGUSTUS CDS 4778730 4779296 0.41 + 0 transcript_id "g1007.t1"; gene_id "g1007"; Scaffold_1 AUGUSTUS stop_codon 4779294 4779296 . + 0 transcript_id "g1007.t1"; gene_id "g1007"; # protein sequence = [MVQGQIYQSQNKFPAARASFAAGFKACPKEPILWILASRLEETDGKSIKARALLDKARQVNPSNELIWAEAVGVEERS # GGAAQAKAMLARGLQDCPTSGLLWTMSIWLEPRPQRKTRALDALKKSNDNPLIICTVARLFWAERKIEKARQWFQRAVPPRPDDSVDTGADIGDLWGW # WLKFERQHGTEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1007 ### # start gene g1008 Scaffold_1 AUGUSTUS gene 4782710 4783543 0.92 + . g1008 Scaffold_1 AUGUSTUS transcript 4782710 4783543 0.92 + . g1008.t1 Scaffold_1 AUGUSTUS start_codon 4782710 4782712 . + 0 transcript_id "g1008.t1"; gene_id "g1008"; Scaffold_1 AUGUSTUS CDS 4782710 4783543 0.92 + 0 transcript_id "g1008.t1"; gene_id "g1008"; Scaffold_1 AUGUSTUS stop_codon 4783541 4783543 . + 0 transcript_id "g1008.t1"; gene_id "g1008"; # protein sequence = [MVAKAKVMAELESSQHDNEDINMIDPDIKPEESDHEEDNLAEPMEDVEEGQGQGEGSENVQEHDDDDDGDRHGHDHDE # DEDHHEDDSPPAQGGMPGGLDDAAAALAIFGDYRQFGSYMMSLSSRLKTMLNNIKSTADPTTRLVTLQELSELLSISTEDTLAGSFQVEAFVRELVKI # LGGRGADRDEDDDEGDEEEERDEDAALAAALAMSTGGTYTGDENLEAQVLACRCLANLMEALPGVAHTVVYHGAIPVLCSKLIEISYIDLAEQTLSVR # ARY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1008 ### # start gene g1009 Scaffold_1 AUGUSTUS gene 4784342 4785394 0.62 + . g1009 Scaffold_1 AUGUSTUS transcript 4784342 4785394 0.62 + . g1009.t1 Scaffold_1 AUGUSTUS start_codon 4784342 4784344 . + 0 transcript_id "g1009.t1"; gene_id "g1009"; Scaffold_1 AUGUSTUS CDS 4784342 4784642 0.62 + 0 transcript_id "g1009.t1"; gene_id "g1009"; Scaffold_1 AUGUSTUS CDS 4784910 4785394 0.99 + 2 transcript_id "g1009.t1"; gene_id "g1009"; Scaffold_1 AUGUSTUS stop_codon 4785392 4785394 . + 0 transcript_id "g1009.t1"; gene_id "g1009"; # protein sequence = [MMKAKAKADKAAARAAVQAPLVAALLITPPSAPSPTPEEQPASEHTATTSNVSSNTTADRTELLRSKPAVVGRFMQLT # VPILIDVYAASVNTPVRVKTLTETLAARSLASSKLKEKERADKDKDKDKDTSDTGTPDASASTTTSVSSSSSAPIIPGYKRLSSIAYDPEDAITLRAR # IMKFKYLSGDDQAESDHTLQSLKELVDRISPPNASEQELSEALWDLTTLFAAPHTSVSSFELLQSGLVDGLLKFATDTDRKGTFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1009 ### # start gene g1010 Scaffold_1 AUGUSTUS gene 4785852 4786652 0.99 + . g1010 Scaffold_1 AUGUSTUS transcript 4785852 4786652 0.99 + . g1010.t1 Scaffold_1 AUGUSTUS start_codon 4785852 4785854 . + 0 transcript_id "g1010.t1"; gene_id "g1010"; Scaffold_1 AUGUSTUS CDS 4785852 4786652 0.99 + 0 transcript_id "g1010.t1"; gene_id "g1010"; Scaffold_1 AUGUSTUS stop_codon 4786650 4786652 . + 0 transcript_id "g1010.t1"; gene_id "g1010"; # protein sequence = [MLAALAASGFPGSSRVSGSSGEPSRSESSPSAPPPAPEASTSQDGSSSSTITRRRSQRLSAKKLGSASGVDDASTNAL # AAATDDSVMQSTNTAADEPEMPPPLPAAAESASETLVDSEMQAEFSDEELDAEVFDEEEVDPDNSISDKTVTLSVAEDGSKIEAQTPDGTRVATPNPN # ISVNQGASSKPSTSSRPSYASALRAKPTDWHLEFAMDDHVLPLDLTIYGAIHQHEMRKKTGSVPPSLFWQGVYTIKFKKVPGPTPASESK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1010 ### # start gene g1011 Scaffold_1 AUGUSTUS gene 4790678 4791514 0.73 - . g1011 Scaffold_1 AUGUSTUS transcript 4790678 4791514 0.73 - . g1011.t1 Scaffold_1 AUGUSTUS stop_codon 4790678 4790680 . - 0 transcript_id "g1011.t1"; gene_id "g1011"; Scaffold_1 AUGUSTUS CDS 4790678 4791395 0.97 - 1 transcript_id "g1011.t1"; gene_id "g1011"; Scaffold_1 AUGUSTUS CDS 4791495 4791514 0.75 - 0 transcript_id "g1011.t1"; gene_id "g1011"; Scaffold_1 AUGUSTUS start_codon 4791512 4791514 . - 0 transcript_id "g1011.t1"; gene_id "g1011"; # protein sequence = [MALVTVPSQVTSSVQLQPTSSSTSTFSSFVSSFSTNSNPDSNTIITPTTTFSSSISSSSDSDSHIGAIIGGAVGGLIA # LNIAIIALVLIYRLKRRSKQQFVEAFDLNGNFEPNRPSRKSTRDEISTRAGEHLAVTEMSAGAQPRGVTSYPFSSSTPVPPVMTALDGGLGTAADAHG # ETSVARSTAPTEGGFGGRSTRNVFIHQDGGRVEMASQDRLEEGEQEEIPPTYESLIRSIRSGEFWSREK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1011 ### # start gene g1012 Scaffold_1 AUGUSTUS gene 4795388 4796523 0.95 - . g1012 Scaffold_1 AUGUSTUS transcript 4795388 4796523 0.95 - . g1012.t1 Scaffold_1 AUGUSTUS stop_codon 4795388 4795390 . - 0 transcript_id "g1012.t1"; gene_id "g1012"; Scaffold_1 AUGUSTUS CDS 4795388 4795727 0.95 - 1 transcript_id "g1012.t1"; gene_id "g1012"; Scaffold_1 AUGUSTUS CDS 4795805 4796523 0.98 - 0 transcript_id "g1012.t1"; gene_id "g1012"; Scaffold_1 AUGUSTUS start_codon 4796521 4796523 . - 0 transcript_id "g1012.t1"; gene_id "g1012"; # protein sequence = [MTSITHGLFIITSAVTLSFALELTLPFGLPTLSLPIGLPPPSLPTGLPPIGSVSTFVPDTSSTPTVVEATSATQPHKS # TTSSIFIFSSSSSSIPSSSRSFSSRSPHSAIITSITTSASSFSFFSSSSSVSSSSSSLSYSTTVTGTSSFPTSSNYSSNSNSHKSAIVGGVVGGGVAV # IIIVIAIVVYSSKRRPRKQFSRVFDGDRTSGTNEPRVSEGGGIGGHITAAGTWFRLTHSSDPVILRLNSHSGSLGHPEIAARFIKGFDSASRGSCGGT # STAGSMTSPTGVSSRRYTSDRAYSVDAETSSPSREELDVGEQEHVSDEIPPTYESLVPQTGGPGIRNEGSGNVMRGWK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1012 ### # start gene g1013 Scaffold_1 AUGUSTUS gene 4803190 4806577 0.17 + . g1013 Scaffold_1 AUGUSTUS transcript 4803190 4806577 0.17 + . g1013.t1 Scaffold_1 AUGUSTUS start_codon 4803190 4803192 . + 0 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS CDS 4803190 4803305 0.47 + 0 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS CDS 4803431 4803821 0.9 + 1 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS CDS 4803904 4804244 0.92 + 0 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS CDS 4805025 4805379 0.38 + 1 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS CDS 4805477 4806577 0.89 + 0 transcript_id "g1013.t1"; gene_id "g1013"; Scaffold_1 AUGUSTUS stop_codon 4806575 4806577 . + 0 transcript_id "g1013.t1"; gene_id "g1013"; # protein sequence = [MLELLSGFKGSIETLGTVLAASAALLTALNPRARSRSQSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGV # YDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIEMARLPEPATLADYRQEVLRIDNRYWKREETRSVRLPSGSSAP # FTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEE # ESENYPQLLACKDAGMEPILLRAIHSEVAARAADRSSTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKEL # VALKDFIDKQLATGAITPSSSPHGAPVLFISLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDIFSD # MLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFANFYR # RFIYNYSDIVVPTRLTRKGAPGSGTAAVKRPSKISKSLSLLRRYWPIGSRIAHLSWTDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHD # KELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPQLPS # YLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1013 ### # start gene g1014 Scaffold_1 AUGUSTUS gene 4809376 4809558 0.79 - . g1014 Scaffold_1 AUGUSTUS transcript 4809376 4809558 0.79 - . g1014.t1 Scaffold_1 AUGUSTUS stop_codon 4809376 4809378 . - 0 transcript_id "g1014.t1"; gene_id "g1014"; Scaffold_1 AUGUSTUS CDS 4809376 4809558 0.79 - 0 transcript_id "g1014.t1"; gene_id "g1014"; Scaffold_1 AUGUSTUS start_codon 4809556 4809558 . - 0 transcript_id "g1014.t1"; gene_id "g1014"; # protein sequence = [MSASRTTTTTISATAGPSRSRPVPPPPPPPPSDSAAQEEEDLEDEDEDDIIRRAHARVDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1014 ### # start gene g1015 Scaffold_1 AUGUSTUS gene 4816997 4818064 0.67 - . g1015 Scaffold_1 AUGUSTUS transcript 4816997 4818064 0.67 - . g1015.t1 Scaffold_1 AUGUSTUS stop_codon 4816997 4816999 . - 0 transcript_id "g1015.t1"; gene_id "g1015"; Scaffold_1 AUGUSTUS CDS 4816997 4818064 0.67 - 0 transcript_id "g1015.t1"; gene_id "g1015"; Scaffold_1 AUGUSTUS start_codon 4818062 4818064 . - 0 transcript_id "g1015.t1"; gene_id "g1015"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLDETEADASNLDANRYPLRDPRHSPYSQTNPSKSRPDPNICSCTRSCYSEPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1015 ### # start gene g1016 Scaffold_1 AUGUSTUS gene 4831747 4832124 0.97 - . g1016 Scaffold_1 AUGUSTUS transcript 4831747 4832124 0.97 - . g1016.t1 Scaffold_1 AUGUSTUS stop_codon 4831747 4831749 . - 0 transcript_id "g1016.t1"; gene_id "g1016"; Scaffold_1 AUGUSTUS CDS 4831747 4832124 0.97 - 0 transcript_id "g1016.t1"; gene_id "g1016"; Scaffold_1 AUGUSTUS start_codon 4832122 4832124 . - 0 transcript_id "g1016.t1"; gene_id "g1016"; # protein sequence = [MFLKLEAKPGTLVQTADCAGTGEGVPGAGGEIEIESGMHEEFAAVGTNGGGGSPRRHARFGVATPYLLKYHLGRLAPI # LSPPRTLTAQQMALEVFVDGEKEEEEKSLIILWFLLLHMLQVMASPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1016 ### # start gene g1017 Scaffold_1 AUGUSTUS gene 4833806 4834453 0.75 + . g1017 Scaffold_1 AUGUSTUS transcript 4833806 4834453 0.75 + . g1017.t1 Scaffold_1 AUGUSTUS start_codon 4833806 4833808 . + 0 transcript_id "g1017.t1"; gene_id "g1017"; Scaffold_1 AUGUSTUS CDS 4833806 4834453 0.75 + 0 transcript_id "g1017.t1"; gene_id "g1017"; Scaffold_1 AUGUSTUS stop_codon 4834451 4834453 . + 0 transcript_id "g1017.t1"; gene_id "g1017"; # protein sequence = [MKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREA # GKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGG # KHQIADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1017 ### # start gene g1018 Scaffold_1 AUGUSTUS gene 4835839 4838502 0.26 + . g1018 Scaffold_1 AUGUSTUS transcript 4835839 4838502 0.26 + . g1018.t1 Scaffold_1 AUGUSTUS start_codon 4835839 4835841 . + 0 transcript_id "g1018.t1"; gene_id "g1018"; Scaffold_1 AUGUSTUS CDS 4835839 4837121 0.26 + 0 transcript_id "g1018.t1"; gene_id "g1018"; Scaffold_1 AUGUSTUS CDS 4837317 4838502 0.97 + 1 transcript_id "g1018.t1"; gene_id "g1018"; Scaffold_1 AUGUSTUS stop_codon 4838500 4838502 . + 0 transcript_id "g1018.t1"; gene_id "g1018"; # protein sequence = [MPFGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYL # GYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFANFYRRFIYNYSDIVVPMTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLI # VETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLH # QFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPADPSSVAGLELA # KDPSNERWSLGSDKLLRLDDRIYVLITAIFAFKSFATSMIIHFRPFRPEPHSRSCTYPRRVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPN # HVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITV # RPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDY # LRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDDSLGLLLMNYMLTNLYRRSTPDTLT # NLDLDHKNHFIPFPFSPRSAEVYFVRLEGKHDDSKLSVYLSLNCLILSFIYYSLIFQN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1018 ### # start gene g1019 Scaffold_1 AUGUSTUS gene 4840708 4842024 0.62 - . g1019 Scaffold_1 AUGUSTUS transcript 4840708 4842024 0.62 - . g1019.t1 Scaffold_1 AUGUSTUS stop_codon 4840708 4840710 . - 0 transcript_id "g1019.t1"; gene_id "g1019"; Scaffold_1 AUGUSTUS CDS 4840708 4841087 0.84 - 2 transcript_id "g1019.t1"; gene_id "g1019"; Scaffold_1 AUGUSTUS CDS 4841391 4842024 0.63 - 0 transcript_id "g1019.t1"; gene_id "g1019"; Scaffold_1 AUGUSTUS start_codon 4842022 4842024 . - 0 transcript_id "g1019.t1"; gene_id "g1019"; # protein sequence = [MFLITAIFAFKSSATFHDHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPV # RPWDSISMDFIEQLPMSNGLYSYSVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFSGLSVKRSPWNFTIPLDIIR # KPMGKLSVSIRLSSSTSGSIVPTNKMTGRLYFRSPKKYLGPFKVISRPGTLSYELKLPTIFADSPGFPRLTAGAGYAESFPNRTQSPPPPIEVDGEEE # YNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1019 ### # start gene g1020 Scaffold_1 AUGUSTUS gene 4844879 4846173 0.61 - . g1020 Scaffold_1 AUGUSTUS transcript 4844879 4846173 0.61 - . g1020.t1 Scaffold_1 AUGUSTUS stop_codon 4844879 4844881 . - 0 transcript_id "g1020.t1"; gene_id "g1020"; Scaffold_1 AUGUSTUS CDS 4844879 4845330 0.91 - 2 transcript_id "g1020.t1"; gene_id "g1020"; Scaffold_1 AUGUSTUS CDS 4845630 4846173 0.62 - 0 transcript_id "g1020.t1"; gene_id "g1020"; Scaffold_1 AUGUSTUS start_codon 4846171 4846173 . - 0 transcript_id "g1020.t1"; gene_id "g1020"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPSGPAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIK # DEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFCSEPEEGFLGLQDWFY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1020 ### # start gene g1021 Scaffold_1 AUGUSTUS gene 4848177 4850212 0.62 - . g1021 Scaffold_1 AUGUSTUS transcript 4848177 4850212 0.62 - . g1021.t1 Scaffold_1 AUGUSTUS stop_codon 4848177 4848179 . - 0 transcript_id "g1021.t1"; gene_id "g1021"; Scaffold_1 AUGUSTUS CDS 4848177 4848916 0.91 - 2 transcript_id "g1021.t1"; gene_id "g1021"; Scaffold_1 AUGUSTUS CDS 4848976 4850212 0.62 - 0 transcript_id "g1021.t1"; gene_id "g1021"; Scaffold_1 AUGUSTUS start_codon 4850210 4850212 . - 0 transcript_id "g1021.t1"; gene_id "g1021"; # protein sequence = [MDAQPHFTRARARATRPEDDDPAPRQRASLRQSILGPPPASADENPALSDGFADLPATPPPTQAQPFVQPAWILPRPN # GEAAVRAREAIRASRSRTQVSADFPSASPPQLNAPVDHPSRPPSAAFGLPMAQDPVDSDEEWFGVAASALYEPNDAYATSGEEGSEHHIHSRSRSAFS # SPGDDNFHRLPPPVELSLSGELVPFLRASAQGLSCQFCPFRTNFLPFPVALEDFVELPPRLASSVPVNRSIHASSRGPFRDPASAPVPDFSNVTRGLQ # PAPTIHVHGGAPAAQRGRTYESTRRSRPRARTREPSPGPDFGAHLRHSSRSLSPVTHYAPARFDSSSLRSSHNRDRPDNDPYAMHPLSYAQNLRAMEQ # RVPVKNGRRFRDPRQGEISSSVPAAMLNQVNPLVISALRTEFRLSSGRTWDVDEAGQVKFKTKRLKELSFESISRRDWDSIAKNMPRALKDYFIPPGE # CGIRSELACEIAQMFKRFFDMLSDQPDFYEAYESYVEYAHKIYSFWFSHLEMNLRIDIFRLSFFDRIWARNVHRNKRWASNLTDTGDTSQASKPKKFQ # KGSSTSSSNVTKSNANVCHICGSDQHNWSRHEHTGNEFLAKSDSGHWILKDSKKGVCIGFNGLNGCARVIHTVGISPSSHPKKAEIIVRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1021 ### # start gene g1022 Scaffold_1 AUGUSTUS gene 4856445 4857638 0.78 - . g1022 Scaffold_1 AUGUSTUS transcript 4856445 4857638 0.78 - . g1022.t1 Scaffold_1 AUGUSTUS stop_codon 4856445 4856447 . - 0 transcript_id "g1022.t1"; gene_id "g1022"; Scaffold_1 AUGUSTUS CDS 4856445 4857638 0.78 - 0 transcript_id "g1022.t1"; gene_id "g1022"; Scaffold_1 AUGUSTUS start_codon 4857636 4857638 . - 0 transcript_id "g1022.t1"; gene_id "g1022"; # protein sequence = [MQSTPAPMKSYTSTIHRLFTINPTVSPIAHLQAWDLFSHMRYVAHPVPDAILYTEMIRACASSSVNGTSDPERALDLF # TEMRLDHNIAPLQRTWDSLILACARTSGSLSRRQKYVNEAFRLAREMLDSYRDAYGRPKYTPDKKTFCALLEGAKRIGDLGRVRWILAEMVRGKGVNV # EVDEEVMMHVFHAYAAYRPPFKRSLARVVEESGNSSVSSEGDVPSAQTPSTNSESVSNASIRTPLSHTDAFSAFSHVPPQTSSEVITEVDILFDRILD # ERSETKDDDILSGKFSSVKPTTRLLNSYLSVYYNHHQSLEAVRSRLGGVFHQMTDVQPDARTYVEALERCAISKKHERGVALRFAEEVFEKWEGIENK # VGVGAVVSPRIIERAHVAWIRMLTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1022 ### # start gene g1023 Scaffold_1 AUGUSTUS gene 4858049 4858854 0.69 - . g1023 Scaffold_1 AUGUSTUS transcript 4858049 4858854 0.69 - . g1023.t1 Scaffold_1 AUGUSTUS stop_codon 4858049 4858051 . - 0 transcript_id "g1023.t1"; gene_id "g1023"; Scaffold_1 AUGUSTUS CDS 4858049 4858597 0.88 - 0 transcript_id "g1023.t1"; gene_id "g1023"; Scaffold_1 AUGUSTUS CDS 4858849 4858854 0.69 - 0 transcript_id "g1023.t1"; gene_id "g1023"; Scaffold_1 AUGUSTUS start_codon 4858852 4858854 . - 0 transcript_id "g1023.t1"; gene_id "g1023"; # protein sequence = [MSDTELDPPVFSEEDLLTLYEEVLAHPDIHVQEEGDKKDMQIKTNEFGLELEFGNDPESQHGQDLDVLVKADSRLSSH # AGMKQQLQHTRFAAALLRESRLNEAPPKSTDTSTTSMTPVYQRVLNHTAHILQDIERVEESLISQPRNAEENSTTKLPIPLLSKQEWDALIRATVCFN # PFFVSAQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1023 ### # start gene g1024 Scaffold_1 AUGUSTUS gene 4870161 4871521 0.35 + . g1024 Scaffold_1 AUGUSTUS transcript 4870161 4871521 0.35 + . g1024.t1 Scaffold_1 AUGUSTUS start_codon 4870161 4870163 . + 0 transcript_id "g1024.t1"; gene_id "g1024"; Scaffold_1 AUGUSTUS CDS 4870161 4870572 0.84 + 0 transcript_id "g1024.t1"; gene_id "g1024"; Scaffold_1 AUGUSTUS CDS 4870628 4871077 0.61 + 2 transcript_id "g1024.t1"; gene_id "g1024"; Scaffold_1 AUGUSTUS CDS 4871220 4871521 0.61 + 2 transcript_id "g1024.t1"; gene_id "g1024"; Scaffold_1 AUGUSTUS stop_codon 4871519 4871521 . + 0 transcript_id "g1024.t1"; gene_id "g1024"; # protein sequence = [MALNSTTPKLLMRKISYPSSFQLKDSVDTNSSVPVQVQARESIVKFKAAALRVLQHMAQSSQQQARKDAFYKIAAMLE # ELKDDAEGLELEDGRNSARDNLDRAAWMADVLVGSVLGQGVRASASGNEGENEDWADKLTLLSTSNSLPRLQLATMILTKLHTKLEVTSRIANAVDES # LSKQQKEFFLRQQLRAIEKELKELQQTTSTSGNTNPSNGNNRHSGDLDLDSNESDDTELMDIRRKLEAMTPGSEERKAGVREWRRLKRLLGAGGAGGG # GGSVEGGVIRGWVEARAQLDSDHYGLDKVKKRLIEYLAVVKLKELAELAEERRLALEAHKPEAAEALEEVAGAADTDGQEKELQVVLRQAQPAIENLP # AKVQKSKGVKGPILL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1024 ### # start gene g1025 Scaffold_1 AUGUSTUS gene 4872284 4872799 0.38 + . g1025 Scaffold_1 AUGUSTUS transcript 4872284 4872799 0.38 + . g1025.t1 Scaffold_1 AUGUSTUS start_codon 4872284 4872286 . + 0 transcript_id "g1025.t1"; gene_id "g1025"; Scaffold_1 AUGUSTUS CDS 4872284 4872799 0.38 + 0 transcript_id "g1025.t1"; gene_id "g1025"; Scaffold_1 AUGUSTUS stop_codon 4872797 4872799 . + 0 transcript_id "g1025.t1"; gene_id "g1025"; # protein sequence = [MYPLVLNCPAVLSLSRYTREAGVRTLERSIGSVVRFKAVEWAECLDAVEAQEGKIVVNEASPHSPSTDLSVINLDHPS # KTALYKPLVEESELEAILGIARWEDGDESLAERNRGSRRGVVYGLVVMGQGEGGILPVETIVVPTGNKSGSGDGGRLRLTGSLGDVRISLHFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1025 ### # start gene g1026 Scaffold_1 AUGUSTUS gene 4873886 4874212 0.37 - . g1026 Scaffold_1 AUGUSTUS transcript 4873886 4874212 0.37 - . g1026.t1 Scaffold_1 AUGUSTUS stop_codon 4873886 4873888 . - 0 transcript_id "g1026.t1"; gene_id "g1026"; Scaffold_1 AUGUSTUS CDS 4873886 4874212 0.37 - 0 transcript_id "g1026.t1"; gene_id "g1026"; Scaffold_1 AUGUSTUS start_codon 4874210 4874212 . - 0 transcript_id "g1026.t1"; gene_id "g1026"; # protein sequence = [MHTNATVSVSSDGTKATLTIDGDEMIVSILSPSSGATFTTSAAVRFDTDPIPPEADQPNPGVTVLIIEMDAGTTNLQV # LFSPQWKDGTSSVTPPSVDLANWSLTSHNT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1026 ### # start gene g1027 Scaffold_1 AUGUSTUS gene 4874355 4876419 0.37 - . g1027 Scaffold_1 AUGUSTUS transcript 4874355 4876419 0.37 - . g1027.t1 Scaffold_1 AUGUSTUS stop_codon 4874355 4874357 . - 0 transcript_id "g1027.t1"; gene_id "g1027"; Scaffold_1 AUGUSTUS CDS 4874355 4875404 0.74 - 0 transcript_id "g1027.t1"; gene_id "g1027"; Scaffold_1 AUGUSTUS CDS 4875601 4875985 0.47 - 1 transcript_id "g1027.t1"; gene_id "g1027"; Scaffold_1 AUGUSTUS CDS 4876127 4876419 0.46 - 0 transcript_id "g1027.t1"; gene_id "g1027"; Scaffold_1 AUGUSTUS start_codon 4876417 4876419 . - 0 transcript_id "g1027.t1"; gene_id "g1027"; # protein sequence = [MAYHDANNQNFSSQNLNSPYAAGDPYYNQSSGFITPPNGEKSKGKGVSKWIKIGIPLAILVIVGVVVGAVVGTKKSKD # SIAVVLPLNLLLLLLAPPPQPTPQFLLLLPLLPPPKLLLRGPAIHSPLPLLLPPLFVQTDPRLIAPQYKWDVLTDHIAADPYLSYWNETIFGNATDWY # NDEPVVYFFDGGNGILDIARQFKQRAKAFSYAYRMTNDTKWADRLWVEIQKAAIRFTLIEYGLSFGLQAYNNASSYIGWWKTNTTGNWNCVCNGGLTL # GSLAILGDDDTGSASQLLALTVPNALENCAAGPTSDGTWSETQDYWYFGTTGYAEMTSALITATGSDYGMLNDAYTLTGYSHMYGQGLTQLFAVGDTG # PNKFSSTANGLFFFASEFNEPTIALYQRDQADAADPWSMFWYDASVQGAFWDGLPLDRNFDNEIDQWVSMRSTWTDINGTYIGMKAGMNQGRQTHNDL # DCGDFVLDAMGHRWAGELGDGNYNALDYFSNDTQSSARWYYYRKMTEGQNTILINKSNQNVLARPTILGYDTTNDTQGSSTVYEVASGSTAYWYADIT # SAYFSDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1027 ### # start gene g1028 Scaffold_1 AUGUSTUS gene 4882848 4883318 0.92 - . g1028 Scaffold_1 AUGUSTUS transcript 4882848 4883318 0.92 - . g1028.t1 Scaffold_1 AUGUSTUS stop_codon 4882848 4882850 . - 0 transcript_id "g1028.t1"; gene_id "g1028"; Scaffold_1 AUGUSTUS CDS 4882848 4883318 0.92 - 0 transcript_id "g1028.t1"; gene_id "g1028"; Scaffold_1 AUGUSTUS start_codon 4883316 4883318 . - 0 transcript_id "g1028.t1"; gene_id "g1028"; # protein sequence = [MSGSPLNEELFKRRAQLFQTTPIVPSQPTTKRSSDVPNFNTGPNKKIKCEFVLASSSAVSDSTTFNTSQSSHDLNLGT # QTYTQNNQAMRKVDVNDPQVYMERQDKYIEGLRKELMVLQQGRDDFITRERNEVSPLSLQGRSCVPFDEFLCRPSNNN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1028 ### # start gene g1029 Scaffold_1 AUGUSTUS gene 4894008 4895072 0.3 + . g1029 Scaffold_1 AUGUSTUS transcript 4894008 4895072 0.3 + . g1029.t1 Scaffold_1 AUGUSTUS start_codon 4894008 4894010 . + 0 transcript_id "g1029.t1"; gene_id "g1029"; Scaffold_1 AUGUSTUS CDS 4894008 4894169 0.38 + 0 transcript_id "g1029.t1"; gene_id "g1029"; Scaffold_1 AUGUSTUS CDS 4894262 4894497 0.34 + 0 transcript_id "g1029.t1"; gene_id "g1029"; Scaffold_1 AUGUSTUS CDS 4894694 4895072 0.72 + 1 transcript_id "g1029.t1"; gene_id "g1029"; Scaffold_1 AUGUSTUS stop_codon 4895070 4895072 . + 0 transcript_id "g1029.t1"; gene_id "g1029"; # protein sequence = [MFKYDSVHGRFKGTVETKGGKLIVDGKEISVFGEKDAGAIPWSSVGAEYIVESTASAHLKGGAKKVIISAPSADAPMY # VCGVNLDSYDSQHAVVSMTGPPSFSQSSDHTLDLQCFLHDELPRTSRQGYPRQIRYLTNDTADVAFFLSFSGLAFRVPTLDVSVVDLVCRTEKSATYD # EIKAAVKEASEGPLKGILGYTEDHVVSTDFIGDNHSSIFDATAGIQLNKNFVKLIAWYDNEWGYSGRVVDLLVFAAKKDGAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1029 ### # start gene g1030 Scaffold_1 AUGUSTUS gene 4895477 4896811 1 - . g1030 Scaffold_1 AUGUSTUS transcript 4895477 4896811 1 - . g1030.t1 Scaffold_1 AUGUSTUS stop_codon 4895477 4895479 . - 0 transcript_id "g1030.t1"; gene_id "g1030"; Scaffold_1 AUGUSTUS CDS 4895477 4896811 1 - 0 transcript_id "g1030.t1"; gene_id "g1030"; Scaffold_1 AUGUSTUS start_codon 4896809 4896811 . - 0 transcript_id "g1030.t1"; gene_id "g1030"; # protein sequence = [MTLRSSSPFRHPKPKRSSRDRLRTTSGREGERERDRDRERDPGSDRDHRHRGDRDRYRDRNRDRDRDSRDRDKDRDRD # RERDRNSRDRDRDRDRDKERGRNSREREASRERTRDIRRSPRSSSRYDHYHRYSPEGKTYSPRNLGNLGQPPVPAPPHPVLSAPPAPVIPSNIPPIYA # RFANGHKYEYDNNADLEPLQPPVLPFVTERMERRREAREQKGRSPQDQNPDYRRGQPPPSSYPLPTSSYHPQNPQIIPPSDGRGRGRDRSNRSAHRRA # GYNGYEDYTYSSTSTPVIPVMATLPNSSSDPINTNIVIPAPSSTRHLSRSRYPPPSSKATRSPYLHTREEYGYKNDHGYNGYNGYNDYNGYNDYNGYG # RDGRTGAEYQGDGGHRYEPNSNVRNGRSSRSPRTHYPPSPQPTRNPRSPKSPLIMRSKFKENFSVLQSESGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1030 ### # start gene g1031 Scaffold_1 AUGUSTUS gene 4898641 4899907 0.75 - . g1031 Scaffold_1 AUGUSTUS transcript 4898641 4899907 0.75 - . g1031.t1 Scaffold_1 AUGUSTUS stop_codon 4898641 4898643 . - 0 transcript_id "g1031.t1"; gene_id "g1031"; Scaffold_1 AUGUSTUS CDS 4898641 4899336 0.75 - 0 transcript_id "g1031.t1"; gene_id "g1031"; Scaffold_1 AUGUSTUS CDS 4899404 4899907 0.75 - 0 transcript_id "g1031.t1"; gene_id "g1031"; Scaffold_1 AUGUSTUS start_codon 4899905 4899907 . - 0 transcript_id "g1031.t1"; gene_id "g1031"; # protein sequence = [MKESETRIAELELERQYSLSEISRLESNVKQRDADVGTYSSRVVDLEKEIETLRERLSNINRDHARVMNEQERALQAA # TEHDGETTEQMKDLLKRQGEQNAELRMNKDKVNNLQAELDRLRRQVHTLQQESADKEVKIVQLSKQHDHAKEDLMQMNMALDSKQQELELLKRRHNVR # GTAGSTSSTPAPSRVSRRDSAVFSTPSTSRPSSVISIGSDKESNTGKSTVTKERKLSSESVPPKMNTLAKSTRMNGPGPTANVSMGPPSTTKPRLAGT # MGPPRMSMGTPTPIARVASLSRSTTTKPALVSSSTSSGAIAHHRRSSALAGGSGSSTTAGSMKQPSSMPSVPTTLPSAPVTPLPISNLANLMEEKENL # DTLHNLDATPAKADRGDRRRSMIPTPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1031 ### # start gene g1032 Scaffold_1 AUGUSTUS gene 4899939 4901663 0.5 - . g1032 Scaffold_1 AUGUSTUS transcript 4899939 4901663 0.5 - . g1032.t1 Scaffold_1 AUGUSTUS stop_codon 4899939 4899941 . - 0 transcript_id "g1032.t1"; gene_id "g1032"; Scaffold_1 AUGUSTUS CDS 4899939 4901663 0.5 - 0 transcript_id "g1032.t1"; gene_id "g1032"; Scaffold_1 AUGUSTUS start_codon 4901661 4901663 . - 0 transcript_id "g1032.t1"; gene_id "g1032"; # protein sequence = [MTSTPYRGPARLKGKESAPQDSVQSSVDVVDESIFHSKEKSPKLPSILHDRSHSFSFGQTVFFSMADASKRSSTSSAV # PSLTSTDTKSSPSPVSLHSSDSPSQSSIRSRSRALSDTVFHSMLRSSPINSKPPEADINDESSSELVVYDPAKPEPDPFSATANTYYTPQTMIPVTPP # RGLPNHARKTSREDSIIVSLQTQLALQSELCGQYETDLRARDEMVQILGQKVNDLEKEELKRKGILRAWKKKVAELERTCRFLEEEVEGSRQESMDRS # IMDEASGEALRMLHRQIASLERDKGDMARREEALRDEVQALENIVQDRSEEILSLKETVWSRDESQRELQQGLREAQEQIEQIGNISMVTMDLASVVG # DGKNDDEKEEERERHRLAEVEWEKQRTEMIMTTEKAKAETVALEGQNEKLRQQLKTTDDELTMLKNELEAQWGHSEKASERIDALEEEKREIEKERHA # LSGDVEELQERLGVVEGQKTDLENECQSLTATIEQLEERIGNMEVEWEESENRRADLEDAKKALEDEMHQVTEELQQQLQSVSTCHIFLFHVLIFSAG # ERPSPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1032 ### # start gene g1033 Scaffold_1 AUGUSTUS gene 4901734 4902726 0.41 - . g1033 Scaffold_1 AUGUSTUS transcript 4901734 4902726 0.41 - . g1033.t1 Scaffold_1 AUGUSTUS stop_codon 4901734 4901736 . - 0 transcript_id "g1033.t1"; gene_id "g1033"; Scaffold_1 AUGUSTUS CDS 4901734 4902726 0.41 - 0 transcript_id "g1033.t1"; gene_id "g1033"; Scaffold_1 AUGUSTUS start_codon 4902724 4902726 . - 0 transcript_id "g1033.t1"; gene_id "g1033"; # protein sequence = [MWRKLTSALKHGEQDTTSTSTVSQGDVMGKVLEQHPNLSMFHPGPQENAPNSSSPPPSPTKSRRSMFKRGSRMPSDDD # ERAPSPSLPKLSLGIPKKVKSSLSLAGNRKSLFDQLQNATEIFPESQSSLSRASGKNTLSAATAEANRGLSLDLLRSPSSPNAAFDSIRSSPPEFHQR # PSIDTLRTLNADADDIRPLTPGILQGSVRSILRDPNTPGTGRNVRFFSRDAYQAVTPEQSTDNEYPPLSVPPVIPTGSAVDLSEPSTLSSVIIRPSSS # PKNARPSVTEVFSPMRQDSENTSSASPPVPEKDTSNLLDMSQDIQFICILASWFRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1033 ### # start gene g1034 Scaffold_1 AUGUSTUS gene 4905209 4906009 0.91 - . g1034 Scaffold_1 AUGUSTUS transcript 4905209 4906009 0.91 - . g1034.t1 Scaffold_1 AUGUSTUS stop_codon 4905209 4905211 . - 0 transcript_id "g1034.t1"; gene_id "g1034"; Scaffold_1 AUGUSTUS CDS 4905209 4906009 0.91 - 0 transcript_id "g1034.t1"; gene_id "g1034"; Scaffold_1 AUGUSTUS start_codon 4906007 4906009 . - 0 transcript_id "g1034.t1"; gene_id "g1034"; # protein sequence = [MKPSTVSPRPILKRSPSACPENDSELPFYGIQEVHFPPSPSLSRFYNAHPSSIYDRSPIVVSANTCALPERGCPGRTY # TLDERNSSTSQPPIISSALSPRGGHFHPRALMNQRPAQHLQNAIPPHCPPLIPDLSSESEESDGFISPPPEASFASLGPHAYSHRADKYPFQLSLDNA # VYFTTRLDNIQLPSPADSKRKSHRDRDRIRSPTGPGEVAADDPGYDDDRDVPASSTRSISPKKNRCRKNLSSRARAGSDDAADGGCLGGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1034 ### # start gene g1035 Scaffold_1 AUGUSTUS gene 4912911 4913687 0.5 - . g1035 Scaffold_1 AUGUSTUS transcript 4912911 4913687 0.5 - . g1035.t1 Scaffold_1 AUGUSTUS stop_codon 4912911 4912913 . - 0 transcript_id "g1035.t1"; gene_id "g1035"; Scaffold_1 AUGUSTUS CDS 4912911 4913687 0.5 - 0 transcript_id "g1035.t1"; gene_id "g1035"; Scaffold_1 AUGUSTUS start_codon 4913685 4913687 . - 0 transcript_id "g1035.t1"; gene_id "g1035"; # protein sequence = [MDQIDEFEYGVVNTDSACMNDDFVNPLYNETTVSYYPQPPAQPGPDKKENHAAGLLNTEKLYTFSPSSPLLENFYSPV # TQPVRSPVTHPTSSLYPSPRAPTSAFSKPASGRNRSKSRGPSLSATGTRRDITPASMVPLDAPTQTRNYVLPSSTSRKVNPIHAQKRSYSQAFGDQEQ # DELVGESPPGPNATEIEHIEWKRRQNTIAARKTRRRKLEYLQRVEAENVVLRDERDKWKVRCGVLEDIVKAHGVAVPVWDDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1035 ### # start gene g1036 Scaffold_1 AUGUSTUS gene 4917679 4919986 0.15 - . g1036 Scaffold_1 AUGUSTUS transcript 4917679 4919986 0.15 - . g1036.t1 Scaffold_1 AUGUSTUS stop_codon 4917679 4917681 . - 0 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS CDS 4917679 4918094 0.73 - 2 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS CDS 4918790 4919062 0.28 - 2 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS CDS 4919199 4919226 0.79 - 0 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS CDS 4919320 4919465 0.63 - 2 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS CDS 4919599 4919986 0.86 - 0 transcript_id "g1036.t1"; gene_id "g1036"; Scaffold_1 AUGUSTUS start_codon 4919984 4919986 . - 0 transcript_id "g1036.t1"; gene_id "g1036"; # protein sequence = [MSKVTPTNAGENVYKKSAFLYNRCPLDLPWYTTTGEQDSISAPLGKTLFTLCIRVRFKFFTDYSSDSEFAAGPVKPME # KGSGKRRNTKSKRESIRPAKKRKVVWSDSEDEEWMTSFDSSVNATSESMVNHAVEIDHGSEDDADDEMQIEDDIDIDEDRQSGEDEDPAHIPKTMAAF # LPRDLSTLPLFSSIKKADSSHTEDDSDIGMSLRTIVTCKSIIIRTIELEIEKGDYFSQNRNESDKEMDSPVSAIDHTMSEPALISRIVADKSEAWIPI # TRIVMLTSFDIALKDIDLLDNLQWSCIFVDEVHRVKNLSSQISLALHRFECLRRFGLTGTAIQNSYDELHAILHWTDPGRLGMTKHWKSLISQPLRRG # QSSTATDAEKAKALVIISILAEVMLSHSDGHEDYFRYISSKIIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1036 ### # start gene g1037 Scaffold_1 AUGUSTUS gene 4939257 4941359 0.21 + . g1037 Scaffold_1 AUGUSTUS transcript 4939257 4941359 0.21 + . g1037.t1 Scaffold_1 AUGUSTUS start_codon 4939257 4939259 . + 0 transcript_id "g1037.t1"; gene_id "g1037"; Scaffold_1 AUGUSTUS CDS 4939257 4939675 0.48 + 0 transcript_id "g1037.t1"; gene_id "g1037"; Scaffold_1 AUGUSTUS CDS 4939733 4940061 0.21 + 1 transcript_id "g1037.t1"; gene_id "g1037"; Scaffold_1 AUGUSTUS CDS 4940221 4941359 0.81 + 2 transcript_id "g1037.t1"; gene_id "g1037"; Scaffold_1 AUGUSTUS stop_codon 4941357 4941359 . + 0 transcript_id "g1037.t1"; gene_id "g1037"; # protein sequence = [MGEFSHSTTEAISSANDLLAAHSALVSRVRQSQQNHRRKLQSIQPPPSLELIRLPTIRSPLPSPSSSSSPTENSPIQS # YNNALPLRLDLPPAKRARVARYKNYVPEEETIRNDYSQRYVDGGEWPQNWVLGADPEHRFEEYPKQQRLLNLKKASVANYSLPPSYLAFSELNSLTPS # KFDVILLDPPFSSSFTWDHLQELPIPALAADPSFVFLWVGSGAGGGLERGREVLAKWGYRRCEDVVWVKTNLTTGSFTATLVSLDFHPLTSYLVRGTG # SLFPFFLPVLDTDVIIWEGDPCDPTRKPPEMYTLIENFCLGIRRLEIFGRASSSIRRGWVTVLGQVEEDQLHRTHGVGENVFVDDAEGGEATKWVREI # WETRIKEMVNGGKPVVPMTADIDALRPKSPFRPGAAGTPHNGPGGNNVGGTMGPGGVTMGMSNSAAVGPRMNISGGNRGVFNPHGSGVMSAPGQNQLM # GSQPLSGGRMGMNVNMHALGMEMGNGLSMEGMIGAWPGMMGGMSNMGGLGNLGTMGNMGIGNMPGLSTSGMGNMGGGMGMGTNNSLVDIGGMGLHAQP # GGHVSMNGMNMFNPVMGNMGWGEQGLGMDNNTWDDNMMNVNMNTLGMNMGGSMPGMGQWG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1037 ### # start gene g1038 Scaffold_1 AUGUSTUS gene 4942912 4944495 0.45 + . g1038 Scaffold_1 AUGUSTUS transcript 4942912 4944495 0.45 + . g1038.t1 Scaffold_1 AUGUSTUS start_codon 4942912 4942914 . + 0 transcript_id "g1038.t1"; gene_id "g1038"; Scaffold_1 AUGUSTUS CDS 4942912 4943269 0.45 + 0 transcript_id "g1038.t1"; gene_id "g1038"; Scaffold_1 AUGUSTUS CDS 4943414 4944495 0.77 + 2 transcript_id "g1038.t1"; gene_id "g1038"; Scaffold_1 AUGUSTUS stop_codon 4944493 4944495 . + 0 transcript_id "g1038.t1"; gene_id "g1038"; # protein sequence = [MPPIRSNDHSDIPIISSDDEESTLVPSTQASTPGLFVNSALSPLTEIEDDDDDSASQLPVKQARFSRSSRKFYRESLP # APIRARRKPSMSDPSSPQSETITVNGHVLTPTIVFDTFWRWYQILCNTYRVLDKTSQYIITQVIQKGSQEPVEIVFRVVLFNIFTKIETWQWLEKRLG # SITWKDYNQESYMNVLEERAQTHTLYTGAFQSPGPKWDYPETYKNHLLLLETLMDNDIAGKLQKFKSMEKAYAFIASFPSMGDFKSYQLLLNLSYSSV # INFSGNDFVVPGIGAVSGLGKMFGKSIENAAKVDPNIRIAVIRYMMETQQQHFRRLGLQLSGLGPNRLPMELADIEHAICEVDKYARKAHPWIVDNKN # GRSELRRKWTPSSEPYPATPVLPQAWSHARRNITRRCNRMPSVQKRWAVEKIVTHRVVRGRIECNVHWYGYSAKDDTWEPVETLFEDIPEVVDDYWKK # YFGKSYSVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1038 ### # start gene g1039 Scaffold_1 AUGUSTUS gene 4945410 4946462 0.22 - . g1039 Scaffold_1 AUGUSTUS transcript 4945410 4946462 0.22 - . g1039.t1 Scaffold_1 AUGUSTUS stop_codon 4945410 4945412 . - 0 transcript_id "g1039.t1"; gene_id "g1039"; Scaffold_1 AUGUSTUS CDS 4945410 4946048 0.86 - 0 transcript_id "g1039.t1"; gene_id "g1039"; Scaffold_1 AUGUSTUS CDS 4946128 4946374 0.4 - 1 transcript_id "g1039.t1"; gene_id "g1039"; Scaffold_1 AUGUSTUS CDS 4946458 4946462 0.27 - 0 transcript_id "g1039.t1"; gene_id "g1039"; Scaffold_1 AUGUSTUS start_codon 4946460 4946462 . - 0 transcript_id "g1039.t1"; gene_id "g1039"; # protein sequence = [MCPYGRAYDYAHPNHPDLYHPHPSKPQVFNRDFTPDQTSRRYSNPQLSFDNQSSSVMPTNEQYGFGTVKTEEWDTFQL # PPSDVSPDCGVCYGSVYSSSQAPPNTALSIYNNNDENGVIDAWIKQVYDPIPSNKTPPSRPMYAEPRPMFYNANGAYTPYPGRIRTSDELSNTFEETE # LVDIKPSLNPGLLGYSSEFNRSEYNPGLQFGNVPNSSSLNSRLGMGSLSAEFAGVGMNRTRSGSTSTSEASTSESEASERSGLSRGGVPVSMYYQQVG # TRTGATESVYSSYAPCSSGLVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1039 ### # start gene g1040 Scaffold_1 AUGUSTUS gene 4949381 4949767 0.95 + . g1040 Scaffold_1 AUGUSTUS transcript 4949381 4949767 0.95 + . g1040.t1 Scaffold_1 AUGUSTUS start_codon 4949381 4949383 . + 0 transcript_id "g1040.t1"; gene_id "g1040"; Scaffold_1 AUGUSTUS CDS 4949381 4949767 0.95 + 0 transcript_id "g1040.t1"; gene_id "g1040"; Scaffold_1 AUGUSTUS stop_codon 4949765 4949767 . + 0 transcript_id "g1040.t1"; gene_id "g1040"; # protein sequence = [MAPHNTSSTEQNFRNNLSQFAWARGSTNDLQPSQQQQSQPRQSGNPFARFYNAVAGDYIPLRSNERSNEDEAWLALSR # WERCRSICALCLELFPMITQGYWDSERVFLGLLYVFSSRLSPCYGKEMQF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1040 ### # start gene g1041 Scaffold_1 AUGUSTUS gene 4951363 4955880 0.37 - . g1041 Scaffold_1 AUGUSTUS transcript 4951363 4955880 0.37 - . g1041.t1 Scaffold_1 AUGUSTUS stop_codon 4951363 4951365 . - 0 transcript_id "g1041.t1"; gene_id "g1041"; Scaffold_1 AUGUSTUS CDS 4951363 4951707 0.64 - 0 transcript_id "g1041.t1"; gene_id "g1041"; Scaffold_1 AUGUSTUS CDS 4951799 4952082 0.55 - 2 transcript_id "g1041.t1"; gene_id "g1041"; Scaffold_1 AUGUSTUS CDS 4952145 4955880 0.67 - 0 transcript_id "g1041.t1"; gene_id "g1041"; Scaffold_1 AUGUSTUS start_codon 4955878 4955880 . - 0 transcript_id "g1041.t1"; gene_id "g1041"; # protein sequence = [MLYSFIGLLYSSLPAEAALQFWGAGSQVEPNRTNYLEYLETTAGRLPAFLQWTVWSTQTQDLNMTMALYDMLAGLSKG # QQCSELAYNFMARGGGEVVPGSSLPSGGSSVSWDVVFGLLESWATGTSARSPIASQGYSQGILGGSSTLMPQSTRSQEMQIGPQDVLLAQSFLRLLSM # VVTHSVAVRLTISGHAHFRAIPTLVSLIPLRVPLELKGMVFETLAAFCTPGAGIPGVEICRAVWTLMERLEVINVRSGTTVSFGSSFVSVKGVEVELE # EVEATHGLYPATIPFLKLLSTLIHTPKRIALKDRVSDQASINTIPESLGQPYRLPGIGPFVAFVIDNIFSKISSREYRRPSERWQMNDLCLAFIERVL # ASYDMESLLAIAEEGSLKENTVVQYLVHPGYEVLKRMLTASNLQTSVLSYVVEGLIGLEKGFAEEEPFFENTITRVLRIVHRVLEIQDIFLDVLVPLT # LEFDSAPLIGTIHPRSYFIKFDQALSFSADYVPAIAAYVAYPSHFEIVLLSVKIIDLLSASSAFSNLAALIARSDDSDRILGGYLQILSVESTEDISI # AEATAEQITGAGSPDIEDIPVSLEQATRTAVLDMLIHNTEPRRSYPNTAHYLLFGETNFEQGIQDPHALGSRDACVHVLLQLVNAGIPTNKGKRHDIS # ATPLFITLPALAERCYHVIYQLCVHPRTSSSMMRYLRTREDFFTRHLSAIPSQVPQMLQEPTIEIQYKDGSRVITTVPTLSSFLRLRSWIFDLVALDL # HVLTGKGRSRNISEVLDILFGNESVLEESASWQDEVFKPFHEVGQSHLKIIEFVQSLTFEWGDSLATKPVDLQLLAEVNLQVCLRKDAAGCEIIDRSA # LLMLLTASRRALFAQNKIITSVQVQQLEAETSYILESSAIENHRRQVVHAISTGFEAWRRVLDITLTRCFDYLPQDHRENMLFDILHVLPPIIKSEDI # HESTAVLLSEVVLSSITKLYEDRRHQIILQSAGGDPHSDLLPAERLYLILRSILECIIGSNHIELVRGNLYAALINYVNLVSSSEDSTSKSQSLAVSV # FGSTREASPFSSSLSVVPHIPLSQNSQLQANSLALLKTGLERLLITISRDAIDGTEVWRTVAFMLLDSLIQLSALEKQHPVLLQLTRHGILSNFVQGV # KESDSLLQCVLKPDPGNIISLSRCFRSLKLSLSLDDLNPLYVYESKMSFFIRVAETRTGAEQLLDVRLIPTLAQCDFLDSRPEADASFVDHDSFLPSA # IQRYHNLFMPSLQIINAMLATLGSKHATASNQVRIETSDSQIMLTISERPWILYRGTVQQSSFSSKMKRRTFRWLYLKKSIYLSRFASTHSGFGAING # AILALSTKCLGRGTWTDAIKPQTDSEILRASVLASGRIATFFPSICVECLLIGSSSDSNFDIEVRRKERLLRKALIAYAGATSEFTGMHILIPRRYLS # AYTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1041 ### # start gene g1042 Scaffold_1 AUGUSTUS gene 4958990 4959667 0.99 + . g1042 Scaffold_1 AUGUSTUS transcript 4958990 4959667 0.99 + . g1042.t1 Scaffold_1 AUGUSTUS start_codon 4958990 4958992 . + 0 transcript_id "g1042.t1"; gene_id "g1042"; Scaffold_1 AUGUSTUS CDS 4958990 4959667 0.99 + 0 transcript_id "g1042.t1"; gene_id "g1042"; Scaffold_1 AUGUSTUS stop_codon 4959665 4959667 . + 0 transcript_id "g1042.t1"; gene_id "g1042"; # protein sequence = [MAKFTTPDLADVVVPHRPQFVHHTSSSLSKANSISEEQHISTRRQLPLPPTQGIHDASASGFGYRDVHDLQSYLQPDL # THEESYISLPNPYSTRHSHRSYSESSVSRSVTPSHNIHSTSFVHSDATPFVSSVNPTSEDFSPSEVSGYGFSFTPTRQIQRTTPADGEYSSDSDIKQR # QGQFFVLSVDGMTVSPLVHTDSGIRLLHRPRNDVYPELQPELPPMYTVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1042 ### # start gene g1043 Scaffold_1 AUGUSTUS gene 4962663 4962989 0.98 - . g1043 Scaffold_1 AUGUSTUS transcript 4962663 4962989 0.98 - . g1043.t1 Scaffold_1 AUGUSTUS stop_codon 4962663 4962665 . - 0 transcript_id "g1043.t1"; gene_id "g1043"; Scaffold_1 AUGUSTUS CDS 4962663 4962989 0.98 - 0 transcript_id "g1043.t1"; gene_id "g1043"; Scaffold_1 AUGUSTUS start_codon 4962987 4962989 . - 0 transcript_id "g1043.t1"; gene_id "g1043"; # protein sequence = [MLSRTETRALAAIAKIRKELDSELKPELEYIKFDLLSLKSAKEAAEEFMRREKRLDILVNNAGIVNTKFVNLYSRLIF # QTSVCRWLPHMSLALMELKYKPATGLVTSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1043 ### # start gene g1044 Scaffold_1 AUGUSTUS gene 4968741 4969322 0.39 - . g1044 Scaffold_1 AUGUSTUS transcript 4968741 4969322 0.39 - . g1044.t1 Scaffold_1 AUGUSTUS stop_codon 4968741 4968743 . - 0 transcript_id "g1044.t1"; gene_id "g1044"; Scaffold_1 AUGUSTUS CDS 4968741 4969322 0.39 - 0 transcript_id "g1044.t1"; gene_id "g1044"; Scaffold_1 AUGUSTUS start_codon 4969320 4969322 . - 0 transcript_id "g1044.t1"; gene_id "g1044"; # protein sequence = [MGGSSAPASAVSPITTSLNDSYSEVRSLGPGIGYGRASSLSSSSGDSPSSQGASPSGRRVPVSNFTTSSSFNSVTLSI # PRSSLRSESVFSESERSSSLEEEDEAGEEDYPMNEYHDHEFELDVDGDDVLDIPGRRRDVYAFSGRGDLEKKNFDEYGFEYEVGLGMGVPKTKVATPM # GLDSMKEEDWEMEMDMD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1044 ### # start gene g1045 Scaffold_1 AUGUSTUS gene 4973064 4974803 0.91 - . g1045 Scaffold_1 AUGUSTUS transcript 4973064 4974803 0.91 - . g1045.t1 Scaffold_1 AUGUSTUS stop_codon 4973064 4973066 . - 0 transcript_id "g1045.t1"; gene_id "g1045"; Scaffold_1 AUGUSTUS CDS 4973064 4974803 0.91 - 0 transcript_id "g1045.t1"; gene_id "g1045"; Scaffold_1 AUGUSTUS start_codon 4974801 4974803 . - 0 transcript_id "g1045.t1"; gene_id "g1045"; # protein sequence = [MKESRHPNIVLFLGLSRAPEPDNRIFIVSEFIDNGNLRHYIHDKNKPFPWRLRLSFATDIARALAYLHARKCIHRDLK # GENLLVTANGRLKITDFGFARIAARSEDESKRLTFCGTDSYMSPEILLGEEFDLPTDIFSFGIILCEISARRLADDHHFKRAAPSFSIDADEIRSLAN # PGCPPDLISLCIECCSSNPAARPTTRQILEKLRVIEAEVLSRPNEGEDVNVGSIKFMTGHKRPGPQLRIPSFGMGVGKDIRNSGSSTDDSDDEDELME # AVQGLSGVGLNSDWTEAPNGKSQFSNPRPNWNSILLTGKEPLLNGNASAISEYSTTVVRAHPNHDGNGTQPPSLSSILTIRASPDPNAINNQVLPGSD # HSPEASTIMAEHPANGSDLLGHSSILSIDSLDSYHTAAGSSIISSTMATEGGSTIKSLHGNYSAPLVHRFTILKPGAKPTKKSGNSTPPTNAPVAEPL # SWNPFDLFFSGGSLVSKCDVCSKRFGPWKPILECDDCGLKYVPLLNSAPCFSSYPELMLNAVTMHQSTVVCALYVLEYIISPATRWESSSLERARRQL # VHPGDNMLRAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1045 ### # start gene g1046 Scaffold_1 AUGUSTUS gene 4986639 4987229 0.57 - . g1046 Scaffold_1 AUGUSTUS transcript 4986639 4987229 0.57 - . g1046.t1 Scaffold_1 AUGUSTUS stop_codon 4986639 4986641 . - 0 transcript_id "g1046.t1"; gene_id "g1046"; Scaffold_1 AUGUSTUS CDS 4986639 4987229 0.57 - 0 transcript_id "g1046.t1"; gene_id "g1046"; Scaffold_1 AUGUSTUS start_codon 4987227 4987229 . - 0 transcript_id "g1046.t1"; gene_id "g1046"; # protein sequence = [MSLSTSYVSQYPRISGPALAALSSLSASDILWIKSLPKAELHAHLNGCVPIEVLYEIAGSSLNDFSSDPPTGTEALNK # SVLTRTEILSGLETLSNFALDDIHEFFGAFRTIYALISTRKTLGAATRAVLQGFLDAPNKRKGNNISGLEGGLTPDDYPECTYLELRTTPRRTPTLSP # KEYLETVLDEVGSTQGTGLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1046 ### # start gene g1047 Scaffold_1 AUGUSTUS gene 4993240 4994138 0.38 + . g1047 Scaffold_1 AUGUSTUS transcript 4993240 4994138 0.38 + . g1047.t1 Scaffold_1 AUGUSTUS start_codon 4993240 4993242 . + 0 transcript_id "g1047.t1"; gene_id "g1047"; Scaffold_1 AUGUSTUS CDS 4993240 4993683 0.38 + 0 transcript_id "g1047.t1"; gene_id "g1047"; Scaffold_1 AUGUSTUS CDS 4993734 4994138 1 + 0 transcript_id "g1047.t1"; gene_id "g1047"; Scaffold_1 AUGUSTUS stop_codon 4994136 4994138 . + 0 transcript_id "g1047.t1"; gene_id "g1047"; # protein sequence = [MNVHNSLDLLRKTAFTFPAIDNHAHPLLRSQYRGKVPFETIISETSSELALQQEATQMIACFRAAAQLSKVLGVEQVI # GQSLWQQVKQRRDAMDYDELCDTFMKACGIQSILLDDGLGGVSEWCEDWKWHRRFGCDTKRIVRIEIEAEKILLPLLQPLLASESALQNPSESIGSGL # RNQLQSILVEFFQQLNTSLTDSARKPEVVSFKSIACYRGGLNIRPRVELGISVAQTEHNYDYVVDSLFQVLFHIKNTGSVRLAHGTINEWIVHWALRV # AGENNIPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1047 ### # start gene g1048 Scaffold_1 AUGUSTUS gene 5003218 5004771 0.75 + . g1048 Scaffold_1 AUGUSTUS transcript 5003218 5004771 0.75 + . g1048.t1 Scaffold_1 AUGUSTUS start_codon 5003218 5003220 . + 0 transcript_id "g1048.t1"; gene_id "g1048"; Scaffold_1 AUGUSTUS CDS 5003218 5004771 0.75 + 0 transcript_id "g1048.t1"; gene_id "g1048"; Scaffold_1 AUGUSTUS stop_codon 5004769 5004771 . + 0 transcript_id "g1048.t1"; gene_id "g1048"; # protein sequence = [MGQLAGAITTPSLEELNVDIDLGRGGISHTMAPNGAANGVQHFSYIEEVVHALLHRGSPAPADKLKALSIAFGFGNGR # RATKERDSDPYLQALKFAQACPCAGTTFLPPGHYATPTPSVVHISWQFLASLPALQSLKVGLGGHAGPVWPSNVNTSVNNIPYTGGSVDIEHFLSSLC # VPDEDYMTGSATLGIHGPIPGPPAGNNVVTFTVGFNHQPTLNNHNNAAALNAIFAGGIPPPPPIHINQQFNPGNLGLPPLPPPPGGPAYIPPHHMIIP # MGGGPGPNPAQIPTNGWLLPNLTELGVKAGSTIFSPATTGGINALFSSSSSAHSYGVMYPPIMPSYNSWSSLDDSSNIPGAGYVRRLLELIEGRNPKT # GQGQNIDGVVPERLKSLEIVLNVAGIPARGVGHANGLFTKNGNKGVPKKKAAKDKESEMPSTAALENSEGSVQEIVAAISASASGLSNVPAKEKVLKS # RNTNAATARTLIGSDSATWIEERIEEVSVRCECMLGESGGMGMPRMW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1048 ### # start gene g1049 Scaffold_1 AUGUSTUS gene 5007552 5008229 0.94 - . g1049 Scaffold_1 AUGUSTUS transcript 5007552 5008229 0.94 - . g1049.t1 Scaffold_1 AUGUSTUS stop_codon 5007552 5007554 . - 0 transcript_id "g1049.t1"; gene_id "g1049"; Scaffold_1 AUGUSTUS CDS 5007552 5008229 0.94 - 0 transcript_id "g1049.t1"; gene_id "g1049"; Scaffold_1 AUGUSTUS start_codon 5008227 5008229 . - 0 transcript_id "g1049.t1"; gene_id "g1049"; # protein sequence = [MSELQDELTQDLSKLEINSRSKDSGAKSPEAKPVESIEFVLCDTEASFSSAVSLLEPSSSLIIDCEGLDLGVNGGALS # LVCIRSMAPQISQNFLFDFVALSALRCSLQPLFSLLTSPTILKILYDGRMDFSALYHGYNMELVNVIDLELVDIKSRFTRGETPEKHKQRLMRCFSYK # QVNNVRSAYKYKDVHVFQGLGSCLIEHGCKATSPKKHGKQSIDSYIART] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1049 ### # start gene g1050 Scaffold_1 AUGUSTUS gene 5008944 5009429 0.42 + . g1050 Scaffold_1 AUGUSTUS transcript 5008944 5009429 0.42 + . g1050.t1 Scaffold_1 AUGUSTUS start_codon 5008944 5008946 . + 0 transcript_id "g1050.t1"; gene_id "g1050"; Scaffold_1 AUGUSTUS CDS 5008944 5009429 0.42 + 0 transcript_id "g1050.t1"; gene_id "g1050"; Scaffold_1 AUGUSTUS stop_codon 5009427 5009429 . + 0 transcript_id "g1050.t1"; gene_id "g1050"; # protein sequence = [MMVIVLMPQTYAQTRDASPDNAYNAYAHPLTLTSGDVYGQMGTIHPEDNIHLMNGMSEVGGDAFMQTLATQLSPAYVY # DLNLNSASYASQNQSQNRSQASHLSHLLNEESVDPIASRAQSTSQPKGKGKPCAVDDDEAQEERGQHNEEQVKREITEEEKRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1050 ### # start gene g1051 Scaffold_1 AUGUSTUS gene 5010489 5012480 0.33 - . g1051 Scaffold_1 AUGUSTUS transcript 5010489 5012480 0.33 - . g1051.t1 Scaffold_1 AUGUSTUS stop_codon 5010489 5010491 . - 0 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5010489 5010598 0.97 - 2 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5010648 5010961 1 - 1 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5011018 5011221 0.99 - 1 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5011303 5011505 0.83 - 0 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5011605 5012155 0.93 - 2 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5012215 5012328 0.8 - 2 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS CDS 5012420 5012480 0.39 - 0 transcript_id "g1051.t1"; gene_id "g1051"; Scaffold_1 AUGUSTUS start_codon 5012478 5012480 . - 0 transcript_id "g1051.t1"; gene_id "g1051"; # protein sequence = [MDDQDIARDIKHWPFEVREKDDVQTPEEISAMVLTKMKETAEAYLGEKVTHAVVTVPAYFNDAQRQATKDAGTIAGLQ # VLRIINEPTAAAIAYGLNKKGGESQIIVYDLGGGTFDVSLLSIDDGVFEVLATAGDTHLGGEDFDNRVIDYLVKSYKKKTGTDVSKNLRALGKLKREV # EKAKRILSSQQSTRIEIESFEDGNDFSETLTRAKFEELNMDLFRKTMKPVEQVLKDANVKKDDIDELLKEYFGGKEPSKGINPDEAVAYGAAVQGGIL # SGAEGTADVVLVDVCPLTLGIETTGGVMTKLIPRKLFSTAADNQPTVLIQVFEGERTLTKDNNLLGKFELSSIPPAPRGVPQIEVTFEIDANGIMKVG # AADKATGKSESITITNEKGRLSQEEIDRMVADAEKFASEDEAQRKRIESLNSLSTFVYGLRTQVNDEEGMGGKISAEDKKTLLATIKETTEWIDENGV # SATAEDLEEKLAEVQGIVNPITTKMYSGGGPSYGEDDDDEATRDHDEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1051 ### # start gene g1052 Scaffold_1 AUGUSTUS gene 5014948 5015304 0.47 + . g1052 Scaffold_1 AUGUSTUS transcript 5014948 5015304 0.47 + . g1052.t1 Scaffold_1 AUGUSTUS start_codon 5014948 5014950 . + 0 transcript_id "g1052.t1"; gene_id "g1052"; Scaffold_1 AUGUSTUS CDS 5014948 5015304 0.47 + 0 transcript_id "g1052.t1"; gene_id "g1052"; Scaffold_1 AUGUSTUS stop_codon 5015302 5015304 . + 0 transcript_id "g1052.t1"; gene_id "g1052"; # protein sequence = [MDHTGPMTRTCFDNALLLKALAGKDNIDDRCIATPSPSEIPDYPAILDEVKGAAKPLEGFKIGLLTEGFSDIPCEQGA # MNDARVSRKVRDAADKWKEMGASVEDVSIPVSNHPKYFQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1052 ### # start gene g1053 Scaffold_1 AUGUSTUS gene 5016638 5017042 0.76 - . g1053 Scaffold_1 AUGUSTUS transcript 5016638 5017042 0.76 - . g1053.t1 Scaffold_1 AUGUSTUS stop_codon 5016638 5016640 . - 0 transcript_id "g1053.t1"; gene_id "g1053"; Scaffold_1 AUGUSTUS CDS 5016638 5017042 0.76 - 0 transcript_id "g1053.t1"; gene_id "g1053"; Scaffold_1 AUGUSTUS start_codon 5017040 5017042 . - 0 transcript_id "g1053.t1"; gene_id "g1053"; # protein sequence = [MAFAPRGFHFDLKTVLSDPNPHIDLDIPVYEETLQNFLKAVNNYKNRSITAITDKRTKDAAEKKKLHDRAQKIEAEIS # KCKVQEIELMASECFAWSTASPTQHVTSYSFRERAGGKERCRGSGDRIQTTNHIPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1053 ### # start gene g1054 Scaffold_1 AUGUSTUS gene 5026784 5027173 0.51 + . g1054 Scaffold_1 AUGUSTUS transcript 5026784 5027173 0.51 + . g1054.t1 Scaffold_1 AUGUSTUS start_codon 5026784 5026786 . + 0 transcript_id "g1054.t1"; gene_id "g1054"; Scaffold_1 AUGUSTUS CDS 5026784 5027173 0.51 + 0 transcript_id "g1054.t1"; gene_id "g1054"; Scaffold_1 AUGUSTUS stop_codon 5027171 5027173 . + 0 transcript_id "g1054.t1"; gene_id "g1054"; # protein sequence = [MKNVSGNSRYDFHKLHNVTKTVTFNLNRIIDRNFYPVVEARRSNTRNRPIGIGVQGLADTFMALKMPFDSAEAKQLNV # SIFETIYHGACEASCEIAMTDGPYATWEDSPAQQGKLQFDLWGVSPTDLWD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1054 ### # start gene g1055 Scaffold_1 AUGUSTUS gene 5027446 5028084 0.45 + . g1055 Scaffold_1 AUGUSTUS transcript 5027446 5028084 0.45 + . g1055.t1 Scaffold_1 AUGUSTUS start_codon 5027446 5027448 . + 0 transcript_id "g1055.t1"; gene_id "g1055"; Scaffold_1 AUGUSTUS CDS 5027446 5028084 0.45 + 0 transcript_id "g1055.t1"; gene_id "g1055"; Scaffold_1 AUGUSTUS stop_codon 5028082 5028084 . + 0 transcript_id "g1055.t1"; gene_id "g1055"; # protein sequence = [MMLMADHGSVQNIPAIPDDVKAVYKTVWEIPQKTILDFAVDRGAFICQSQSLNIHLASPSVGQLTSMHFYGWRKGLKT # GMYYLRTTSAARPIQITVDNAISKEMKNRRSDFGFNSVVNFTTTESAAISSTQADGCSFLSTDLVSSTRMSHMSSMPIDDSLISSVCNADESNEADEV # EIEDSATTCSHLQQRSVQFGNTNSFVNEVPCEMCSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1055 ### # start gene g1056 Scaffold_1 AUGUSTUS gene 5038871 5039378 0.47 + . g1056 Scaffold_1 AUGUSTUS transcript 5038871 5039378 0.47 + . g1056.t1 Scaffold_1 AUGUSTUS start_codon 5038871 5038873 . + 0 transcript_id "g1056.t1"; gene_id "g1056"; Scaffold_1 AUGUSTUS CDS 5038871 5038895 0.5 + 0 transcript_id "g1056.t1"; gene_id "g1056"; Scaffold_1 AUGUSTUS CDS 5038939 5039378 0.47 + 2 transcript_id "g1056.t1"; gene_id "g1056"; Scaffold_1 AUGUSTUS stop_codon 5039376 5039378 . + 0 transcript_id "g1056.t1"; gene_id "g1056"; # protein sequence = [MAGKEFNCTSSLIVAFQSHAVASSSADHMNISKADILNPDSDELSSSTNPAVKLAFAETHILNETKAYLESNGVVLVS # FSSSGTVRADTTILVKNICYGTSDIEIRELFEPHGTVSRVLVSPAGTIAVVEFEKPDKASRGFRAVGYRQSGKSVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1056 ### # start gene g1057 Scaffold_1 AUGUSTUS gene 5043178 5043630 0.68 - . g1057 Scaffold_1 AUGUSTUS transcript 5043178 5043630 0.68 - . g1057.t1 Scaffold_1 AUGUSTUS stop_codon 5043178 5043180 . - 0 transcript_id "g1057.t1"; gene_id "g1057"; Scaffold_1 AUGUSTUS CDS 5043178 5043630 0.68 - 0 transcript_id "g1057.t1"; gene_id "g1057"; Scaffold_1 AUGUSTUS start_codon 5043628 5043630 . - 0 transcript_id "g1057.t1"; gene_id "g1057"; # protein sequence = [MVTTKQRGKSDVCTRRGQLGGNISPQEEKKFRRNCNNSVELIYHVTADIPDIAYPQSHDISVPLNCYNSVERNFFSSR # GETSVLCSGTLTPSMFSTFDSSPASIIDNGIGYYSSHSQNHPKDPVDLNLDEKIPENENNTEGSLVTLDGLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1057 ### # start gene g1058 Scaffold_1 AUGUSTUS gene 5061388 5062371 0.81 + . g1058 Scaffold_1 AUGUSTUS transcript 5061388 5062371 0.81 + . g1058.t1 Scaffold_1 AUGUSTUS start_codon 5061388 5061390 . + 0 transcript_id "g1058.t1"; gene_id "g1058"; Scaffold_1 AUGUSTUS CDS 5061388 5062371 0.81 + 0 transcript_id "g1058.t1"; gene_id "g1058"; Scaffold_1 AUGUSTUS stop_codon 5062369 5062371 . + 0 transcript_id "g1058.t1"; gene_id "g1058"; # protein sequence = [MVVFEQNPGKFHIIINHSYPQSDLPCPSEICSLLPDSLIVDPSKISINSLINSDDYPCDWGTFADYYLQVTVAPKGTQ # VAVFDVDAAFRNMPLHRSTRRFIALFIDNLIFLDLCLNFSKRSAPGIRGQITDVMVKILCKHGVEALLEWVNDFIFLRFPKSCNSDGSFTYSYNETLV # WAVTAKLGWPWAPKEFVSFSFSFLYIDFLWVLSAKTVQLPLEKKVKYATCVLPCTEPDALMTLDKAEELTGTLNHVCLVLPTARTHLVSLYKFSAGFK # HSRSNMAAHRISFLLREDLTWWLQTFEANFVGMSIFTLPDYIDISLYVDASTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1058 ### # start gene g1059 Scaffold_1 AUGUSTUS gene 5073110 5073743 0.5 - . g1059 Scaffold_1 AUGUSTUS transcript 5073110 5073743 0.5 - . g1059.t1 Scaffold_1 AUGUSTUS stop_codon 5073110 5073112 . - 0 transcript_id "g1059.t1"; gene_id "g1059"; Scaffold_1 AUGUSTUS CDS 5073110 5073495 0.55 - 2 transcript_id "g1059.t1"; gene_id "g1059"; Scaffold_1 AUGUSTUS CDS 5073662 5073743 0.5 - 0 transcript_id "g1059.t1"; gene_id "g1059"; Scaffold_1 AUGUSTUS start_codon 5073741 5073743 . - 0 transcript_id "g1059.t1"; gene_id "g1059"; # protein sequence = [MTKALTIKLAQAAPEIIIQAQAGFVPGLQALYKDAYTTTIVNGQKSETPFKVTRGLRQGDPLSCLLFDIAIDPLRELL # RKSNLKGYQIPGYAERLIATFFTDNPTVYLSKEDDFGELQLILDEWCTASGARFNINKTEIIPIGSQITKKTCAKHG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1059 ### # start gene g1060 Scaffold_1 AUGUSTUS gene 5078737 5079480 0.59 - . g1060 Scaffold_1 AUGUSTUS transcript 5078737 5079480 0.59 - . g1060.t1 Scaffold_1 AUGUSTUS stop_codon 5078737 5078739 . - 0 transcript_id "g1060.t1"; gene_id "g1060"; Scaffold_1 AUGUSTUS CDS 5078737 5079480 0.59 - 0 transcript_id "g1060.t1"; gene_id "g1060"; Scaffold_1 AUGUSTUS start_codon 5079478 5079480 . - 0 transcript_id "g1060.t1"; gene_id "g1060"; # protein sequence = [MLNETWPTSIVPYIYMNAPTSTTNSSGIPHTDPNNCFSVEYFVCELLRRSSTSSMVFFTAICYVEAVRSKVQGVFTSD # DYHVYVELNIAAKRTCTDIRSDVLYQNQLFFSTNTTSDKNQLRNSSFDIANEECIDGTAADIEILDNKEVIEKTMSEMVVHRRMESPNLFSVQPLPSP # LLCPRRTFIASLVLASKFNDDKPISNGTWSKLCNLPPLEIGRCERALGIALDWRLWVGKPNRRVDNSVIHI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1060 ### # start gene g1061 Scaffold_1 AUGUSTUS gene 5092831 5093064 0.69 + . g1061 Scaffold_1 AUGUSTUS transcript 5092831 5093064 0.69 + . g1061.t1 Scaffold_1 AUGUSTUS start_codon 5092831 5092833 . + 0 transcript_id "g1061.t1"; gene_id "g1061"; Scaffold_1 AUGUSTUS CDS 5092831 5093064 0.69 + 0 transcript_id "g1061.t1"; gene_id "g1061"; Scaffold_1 AUGUSTUS stop_codon 5093062 5093064 . + 0 transcript_id "g1061.t1"; gene_id "g1061"; # protein sequence = [MDFENLENIHDLETCEGRKPSDSSEPEEESSSIDGSDDNEDEDDPDHSDNSEISNSLGRIDKFLTFTSESKPLGKKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1061 ### # start gene g1062 Scaffold_1 AUGUSTUS gene 5099629 5100215 0.94 + . g1062 Scaffold_1 AUGUSTUS transcript 5099629 5100215 0.94 + . g1062.t1 Scaffold_1 AUGUSTUS start_codon 5099629 5099631 . + 0 transcript_id "g1062.t1"; gene_id "g1062"; Scaffold_1 AUGUSTUS CDS 5099629 5099706 0.94 + 0 transcript_id "g1062.t1"; gene_id "g1062"; Scaffold_1 AUGUSTUS CDS 5099763 5100215 1 + 0 transcript_id "g1062.t1"; gene_id "g1062"; Scaffold_1 AUGUSTUS stop_codon 5100213 5100215 . + 0 transcript_id "g1062.t1"; gene_id "g1062"; # protein sequence = [MAFTASTAYVTEIRLEGLIVLRDVIQIFAKSPDPAFEDALLLKQHQSPITAALTPAFSTDSTPEILASAVHACVTFVG # CGVVKHVSSMGRILKLLTVALEQSKGVDNSLQRFYCLQAAPDSGMVSLGETGELSPNGSAMLRISALSAWPQLERLAISRPTSLTSSNHIDQYWQLCG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1062 ### # start gene g1063 Scaffold_1 AUGUSTUS gene 5107686 5108149 0.45 + . g1063 Scaffold_1 AUGUSTUS transcript 5107686 5108149 0.45 + . g1063.t1 Scaffold_1 AUGUSTUS start_codon 5107686 5107688 . + 0 transcript_id "g1063.t1"; gene_id "g1063"; Scaffold_1 AUGUSTUS CDS 5107686 5107832 0.45 + 0 transcript_id "g1063.t1"; gene_id "g1063"; Scaffold_1 AUGUSTUS CDS 5107919 5108149 0.95 + 0 transcript_id "g1063.t1"; gene_id "g1063"; Scaffold_1 AUGUSTUS stop_codon 5108147 5108149 . + 0 transcript_id "g1063.t1"; gene_id "g1063"; # protein sequence = [MIEEQKKEMPHVTTGDLTGKTIMITGANSGIGFQAAKHFASMNPTRLIVMIEEIEADTVYKGAEPMALKLSSFHLSNK # TLDRLDIIDENAAISTNYEYITTNDGTFTSSRYIHPTVNVLGPPRTY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1063 ### # start gene g1064 Scaffold_1 AUGUSTUS gene 5111109 5112141 0.62 + . g1064 Scaffold_1 AUGUSTUS transcript 5111109 5112141 0.62 + . g1064.t1 Scaffold_1 AUGUSTUS start_codon 5111109 5111111 . + 0 transcript_id "g1064.t1"; gene_id "g1064"; Scaffold_1 AUGUSTUS CDS 5111109 5111244 0.89 + 0 transcript_id "g1064.t1"; gene_id "g1064"; Scaffold_1 AUGUSTUS CDS 5111498 5112141 0.62 + 2 transcript_id "g1064.t1"; gene_id "g1064"; Scaffold_1 AUGUSTUS stop_codon 5112139 5112141 . + 0 transcript_id "g1064.t1"; gene_id "g1064"; # protein sequence = [MSFTSPSTPNPVSPPVSPPPHPNSAEMTVDAPIDELASTIEEPPLVFACRFLEVHGDSGQRTHFTLPSEQWRNIAEKI # EASTNSTVALIKLNALDEQDQQELDQLELGEFLRKQPQLPGPSASSSLPLPSPSVMATRRMPAKRRKRSVQQEEGGSSWHKHPVEEVSELDVVPKAHN # CKRKHPVGGRRDAEIPDYCRVVVDLRPHFVDTPALATLSGGPINETMHLRELGDSLGLFRREVKAYIGSYRQLERQQMRVKRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1064 ### # start gene g1065 Scaffold_1 AUGUSTUS gene 5116730 5117798 0.36 + . g1065 Scaffold_1 AUGUSTUS transcript 5116730 5117798 0.36 + . g1065.t1 Scaffold_1 AUGUSTUS start_codon 5116730 5116732 . + 0 transcript_id "g1065.t1"; gene_id "g1065"; Scaffold_1 AUGUSTUS CDS 5116730 5116786 0.36 + 0 transcript_id "g1065.t1"; gene_id "g1065"; Scaffold_1 AUGUSTUS CDS 5116887 5117798 0.62 + 0 transcript_id "g1065.t1"; gene_id "g1065"; Scaffold_1 AUGUSTUS stop_codon 5117796 5117798 . + 0 transcript_id "g1065.t1"; gene_id "g1065"; # protein sequence = [MDFIEQLPMSNGYTAILVVHGVPNHVTSDRSSEFVLAFFRALGKALSMELHYTSGYHPEADWQSERVNQTLKQYIRIY # CSYQQDDWSPLLPIAEFAYNNAPNAPTGITPFFANKGYHPNITVWPKINMKSDLARDFVVNLNELHVFLREEILLAHSHYKEQADRKRISHPEFPIGS # KVFVLAKHIRSTRPTEKFSEKYLGPFKIISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEQYNIAEILDSKLNRRY # KRCPLRYYIRWAGYEGTDNESSWVAADELHADELVPAFHARYPLKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1065 ### # start gene g1066 Scaffold_1 AUGUSTUS gene 5132560 5133123 0.89 - . g1066 Scaffold_1 AUGUSTUS transcript 5132560 5133123 0.89 - . g1066.t1 Scaffold_1 AUGUSTUS stop_codon 5132560 5132562 . - 0 transcript_id "g1066.t1"; gene_id "g1066"; Scaffold_1 AUGUSTUS CDS 5132560 5133123 0.89 - 0 transcript_id "g1066.t1"; gene_id "g1066"; Scaffold_1 AUGUSTUS start_codon 5133121 5133123 . - 0 transcript_id "g1066.t1"; gene_id "g1066"; # protein sequence = [MKVWPALGYASSFPSSSFNPFADDEELLGPLQDNDSDNETDSFSNAPSTPAATIVVPRSSYLKSTSPYQSKCSPRVEM # EITEMRSTFDIGEDGKLSGVREASVRLKALAPKALNQIDLKDDDDRLIDVVAINDVDRFLSRTATPTWSWEQDPKRSSLEKLKQLVYTRYSHKREEAE # SLRAFKYGSCF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1066 ### # start gene g1067 Scaffold_1 AUGUSTUS gene 5136039 5136339 0.37 + . g1067 Scaffold_1 AUGUSTUS transcript 5136039 5136339 0.37 + . g1067.t1 Scaffold_1 AUGUSTUS start_codon 5136039 5136041 . + 0 transcript_id "g1067.t1"; gene_id "g1067"; Scaffold_1 AUGUSTUS CDS 5136039 5136041 0.37 + 0 transcript_id "g1067.t1"; gene_id "g1067"; Scaffold_1 AUGUSTUS CDS 5136112 5136339 0.52 + 0 transcript_id "g1067.t1"; gene_id "g1067"; Scaffold_1 AUGUSTUS stop_codon 5136337 5136339 . + 0 transcript_id "g1067.t1"; gene_id "g1067"; # protein sequence = [MYNRHSSTNVSIAENSGQLGVNQNHPQPADISPMSSLTSTSNMSQLYIRHQDGGRGTSPRALPERDNSGRGSGASA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1067 ### # start gene g1068 Scaffold_1 AUGUSTUS gene 5137371 5139063 0.5 + . g1068 Scaffold_1 AUGUSTUS transcript 5137371 5139063 0.5 + . g1068.t1 Scaffold_1 AUGUSTUS start_codon 5137371 5137373 . + 0 transcript_id "g1068.t1"; gene_id "g1068"; Scaffold_1 AUGUSTUS CDS 5137371 5138679 0.51 + 0 transcript_id "g1068.t1"; gene_id "g1068"; Scaffold_1 AUGUSTUS CDS 5138813 5139063 0.79 + 2 transcript_id "g1068.t1"; gene_id "g1068"; Scaffold_1 AUGUSTUS stop_codon 5139061 5139063 . + 0 transcript_id "g1068.t1"; gene_id "g1068"; # protein sequence = [MIATPWLSYCTVCRDHDKPRAAFCGLCLRESQSYEAELQINPTFHVGCIENEDHELWPNVQATCRSCRAEWLWRKACS # ANVREAVGGRRFRIDDWEAKSTLDGFIDLSEGRVSDVILVARERYWIRTYTKLADMLSQALAASRYEGREERLTAAAAGEDTEMDLSDEDDDEDDLEL # AQLTEDGGIRELALGDWARNRILDGFWISPADQWYNHIQPDLPWDVRAVHPCPWTVESDDSAPQGDSEQAAEEEHPRDSTVHAPIPPSHPLCEQTFNA # HQKQMRILLLPAMKNIVRRIVIESSADAADPAIRAARMTLEDVMKELRDEATWFDGVDWLERRRNARHDAAAREEATSDDHSTSSGSSKSSDESFTIT # SPVLSTTTLQTTPSPPPIEDKSAGADSKNVYRAVTIAVSPVLDPPRLIHPIPHVPVMAAHLPHFTQAAASEAAAVAAGVANRNQPPADVQEHPAQEIK # DDVVEIKLGEADGEGEEEIDYLEYEDDVFDSDEVESRYESRSRSRSHQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1068 ### # start gene g1069 Scaffold_1 AUGUSTUS gene 5139915 5140328 0.4 - . g1069 Scaffold_1 AUGUSTUS transcript 5139915 5140328 0.4 - . g1069.t1 Scaffold_1 AUGUSTUS stop_codon 5139915 5139917 . - 0 transcript_id "g1069.t1"; gene_id "g1069"; Scaffold_1 AUGUSTUS CDS 5139915 5140328 0.4 - 0 transcript_id "g1069.t1"; gene_id "g1069"; Scaffold_1 AUGUSTUS start_codon 5140326 5140328 . - 0 transcript_id "g1069.t1"; gene_id "g1069"; # protein sequence = [MWSAQFAPSENEVSAYRIFLHDWVARPITPPSMSIASSSNSTNAVVYAWWNGATEVTAWKLMGSTDSMPLAAEALNVV # DKVDFETTLTYTGIRHYTFFQVAALNARGEILEYSGFTALNGTSFAKADNQTATASPLN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1069 ### # start gene g1070 Scaffold_1 AUGUSTUS gene 5146079 5146291 0.45 + . g1070 Scaffold_1 AUGUSTUS transcript 5146079 5146291 0.45 + . g1070.t1 Scaffold_1 AUGUSTUS start_codon 5146079 5146081 . + 0 transcript_id "g1070.t1"; gene_id "g1070"; Scaffold_1 AUGUSTUS CDS 5146079 5146291 0.45 + 0 transcript_id "g1070.t1"; gene_id "g1070"; Scaffold_1 AUGUSTUS stop_codon 5146289 5146291 . + 0 transcript_id "g1070.t1"; gene_id "g1070"; # protein sequence = [MDTNEMVSDTSSVSSSADSPVSPISSTDSLDTADNFEEGSQTNPIHVDDGSGEDKNLIEDEESLGTGVSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1070 ### # start gene g1071 Scaffold_1 AUGUSTUS gene 5147709 5147993 0.98 - . g1071 Scaffold_1 AUGUSTUS transcript 5147709 5147993 0.98 - . g1071.t1 Scaffold_1 AUGUSTUS stop_codon 5147709 5147711 . - 0 transcript_id "g1071.t1"; gene_id "g1071"; Scaffold_1 AUGUSTUS CDS 5147709 5147993 0.98 - 0 transcript_id "g1071.t1"; gene_id "g1071"; Scaffold_1 AUGUSTUS start_codon 5147991 5147993 . - 0 transcript_id "g1071.t1"; gene_id "g1071"; # protein sequence = [MPLRIIPEAALEALALVLLLDDALVPEDEVTDADVDPSPDVLEELDEELEEGKEVIEKEIEVLVLASAQNWFVNPSAV # ASSLAQLDCMQDMRAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1071 ### # start gene g1072 Scaffold_1 AUGUSTUS gene 5152912 5154706 0.75 - . g1072 Scaffold_1 AUGUSTUS transcript 5152912 5154706 0.75 - . g1072.t1 Scaffold_1 AUGUSTUS stop_codon 5152912 5152914 . - 0 transcript_id "g1072.t1"; gene_id "g1072"; Scaffold_1 AUGUSTUS CDS 5152912 5153359 0.9 - 1 transcript_id "g1072.t1"; gene_id "g1072"; Scaffold_1 AUGUSTUS CDS 5153415 5154706 0.76 - 0 transcript_id "g1072.t1"; gene_id "g1072"; Scaffold_1 AUGUSTUS start_codon 5154704 5154706 . - 0 transcript_id "g1072.t1"; gene_id "g1072"; # protein sequence = [MDGLLDQDIKVLSYFSDGTEVERVVQRDFAASAGHYVDINLPNPHDESQEGLHIRVPIYRGVPIVMGQDSKHCLKTFR # NNLFTGARLLTLGNHAAFYELIREMAFAENSPLFHRDVEKLDRQDDNAAARLFSAPALQYLADHYPDQLGVIVYLFVFGEVCDAYQNRHIPHEERIRI # ALRTHYFVCMWQKFIDDLPCYRQDRYCISRESVNILKYLVEALISLVVIHRDYYPDIPLLLWLHSTEICEHVFGISRRDIKDFGLLDFHQMIPKLNVQ # IREAIFNAHLTETNERMKARASGYHHTYSNLASLNIMALGHYPSDLVIHTINVQASDQADSLWALLGVSPMSLHDSAIQAPLPGITAFESADDDMDDS # EFDHDDIFDEDFDHEMEELQWLIHLSESNRHSLTTEQQERLECLTNAAVALSIEDRTRLNALEDEMDVDEMYDTFVAEDRQILDDVRAMQIDIPNINT # DQDTSVVIADDDLDDITLQSLISLRERHQTNHAARSVRTRSQTQNQVDSKQSLRQQITRRFYDELKTAQVQGITSGEGRGIRWYGSGTKTTLGNAANA # ATVAKATATKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1072 ### # start gene g1073 Scaffold_1 AUGUSTUS gene 5156603 5158102 0.52 - . g1073 Scaffold_1 AUGUSTUS transcript 5156603 5158102 0.52 - . g1073.t1 Scaffold_1 AUGUSTUS stop_codon 5156603 5156605 . - 0 transcript_id "g1073.t1"; gene_id "g1073"; Scaffold_1 AUGUSTUS CDS 5156603 5158102 0.52 - 0 transcript_id "g1073.t1"; gene_id "g1073"; Scaffold_1 AUGUSTUS start_codon 5158100 5158102 . - 0 transcript_id "g1073.t1"; gene_id "g1073"; # protein sequence = [MSIDIGEEERIVFDPSVWIHKGKTWDNPPLHVFHARDTAFELPLQMKKLLPAPDLPIVDFLQLKFPIQSHSLNIYSLD # SWFSHDSPDTSDQACVDMLWRRSIPSVELLKDLRVARGQKWLDGAKSIRDPRYNRGNDLFPLWALTLWQTLGEMGDDQEQWKLGLETIRQDTVTAAHG # FTTAARIFGQRGWNSDVRSGRFVFSSLTFLSLLCPTMINDDVTQAMTYHLQCRMEEDCNVNSKKHFLAASRFASVLKAAAGKGTYTSKKALPQSLLDI # EELVEENPKIHVWFPVLLNQHEVAFCINFGEKTIAYGELNGLDSIGLRNKSLIHQMYVGDSLKIMPPPKEVIKNVQKWLQARFGGTFREEGNTITHGD # QCDSISCIPITMNTIAHGIFGDSIWIHENRFLDRLWWFQQLVPDGIETVSTFRYIEQVVSTHHISQSNPSLKMRNKAPVKPTLANILNPPSSEEESLN # DLMTFLCDEVEIDMREVQSEVLVGRIRQK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1073 ### # start gene g1074 Scaffold_1 AUGUSTUS gene 5166429 5170254 0.08 - . g1074 Scaffold_1 AUGUSTUS transcript 5166429 5170254 0.08 - . g1074.t1 Scaffold_1 AUGUSTUS stop_codon 5166429 5166431 . - 0 transcript_id "g1074.t1"; gene_id "g1074"; Scaffold_1 AUGUSTUS CDS 5166429 5169055 0.96 - 2 transcript_id "g1074.t1"; gene_id "g1074"; Scaffold_1 AUGUSTUS CDS 5169151 5169318 0.56 - 2 transcript_id "g1074.t1"; gene_id "g1074"; Scaffold_1 AUGUSTUS CDS 5169388 5170116 0.24 - 2 transcript_id "g1074.t1"; gene_id "g1074"; Scaffold_1 AUGUSTUS CDS 5170212 5170254 0.4 - 0 transcript_id "g1074.t1"; gene_id "g1074"; Scaffold_1 AUGUSTUS start_codon 5170252 5170254 . - 0 transcript_id "g1074.t1"; gene_id "g1074"; # protein sequence = [MFSGSTKPTQDDYAPNLNSYADNVPIVAVEYFQKGSNRNAEGVSVHDDLNDDGTEEGTCVFTVHGIVGPSIKNMTRDQ # MIGIAAMHLDNEGKFMRTSHAENPESLWNNPQLYPKMFPWLFPFGLGGIGTSNIKSFSESSHLNFLLLYHDKRFQLDPNFPLIAFSHQQVKASSSQSY # LLAESNKFDEVSNRFLSIDKSVLQNIATRMANGEHVKPANDSEIQCFKLLGDLSHAGAKTQGSISSKKNMQSEIWSLINHIDTKEKFDVPLRTSSECR # LLISNNPVAGARFFHLLVNLFLKHVVDIESSEGGLFGPTNPASSFQSQLISFLESVRIGEFLTGSHAYVKETVALQSKSNINYISPERTLPTPPPPYC # DCGITDCHKCSTFQHWFEEFKCTVDDLLLKSNVHDCFRGISPDGSVLNQDKFETSCLNNAHKKCKARFPRECFQQTSVDPDNGHIDLKKLEEWLNDIS # PGLTYLVRGNTDVTSILSGTAIKSAVIYIADYITKTGLKTHVVFDSIKTIFDKSTEIIDGSFSTKEKSRRLISRIVNLLSTKLELGSPMISLYLLKNP # DHYTSHNFIPFYWKTYVSTARSFFGENDSTSEPKLILTKRWDKIVGLSSSLDYTHRPVQHVNYNLYNWVCSFYKVAKRKSKDEVLSDHETELKSSKSV # KSTKGLPFLVGHPLVETHVISTRRNSSMTVPNFIGALPRPNKDDREYYCCTMLTLFCPWRTGEDLKKKDQSWHEAFEAYDFCEQSQLYMKNMNIRFEC # LDARDDFRAQLKSGKLDVTKLPSSIPIQLHADLVNKLDGSHSDMNSSDIEDIGHNYDQYTEDKKGNFFLRRESAMRAMKDMLFNIGWVIPLTGSVQSK # SITTCSPILLPKEKPQHWDLILKGMRDQVLATRDKDRGLPPSNNNENINDPGKYRPNIVEICDKHYFDKLGIDYGSIKELTLNIKCHNLNNEQERAFR # IIAQHSAGLVSEPLYIYIGGMGGTGKSQVIKAVLQFFADRNSSFAIVTSAPTGNAAALLGGSTYHFLLGLNNKVEEVGRGTMAQVCARLEHVQYMILD # EVSMLSCSDLYRISVQLCGAKNKHDIAFGGMNMIFAGDFAQLPPVGGESVSLYSYRRPTDANKYNGQCAAMGKSLWHNVTHVVILRKNMRNTGSSKAD # ISFRLALDNMRYSCTKEDIGFLKYIGFLQISW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1074 ### # start gene g1075 Scaffold_1 AUGUSTUS gene 5175258 5176423 0.59 - . g1075 Scaffold_1 AUGUSTUS transcript 5175258 5176423 0.59 - . g1075.t1 Scaffold_1 AUGUSTUS stop_codon 5175258 5175260 . - 0 transcript_id "g1075.t1"; gene_id "g1075"; Scaffold_1 AUGUSTUS CDS 5175258 5175921 0.92 - 1 transcript_id "g1075.t1"; gene_id "g1075"; Scaffold_1 AUGUSTUS CDS 5176002 5176423 0.59 - 0 transcript_id "g1075.t1"; gene_id "g1075"; Scaffold_1 AUGUSTUS start_codon 5176421 5176423 . - 0 transcript_id "g1075.t1"; gene_id "g1075"; # protein sequence = [MSLSPPKNLTSIVVNGRTYYASDDPNFINLVSSPSSSLHGGTPVRSVVADVVSSQMDFPSSPPSPQVDDDSFDLCYPP # KSPKNAMSPIPAPPSSHSLSIEDYDNMDIDLPANFRSIRALRTPSPDLPSNPLEGWIPTPRSSAGHAPLMIPYGTSPSPPRSLISSPSHSNSDTSTVN # TSPSKTSASGSPSSRLKGKDLRFHPFSHSKRTAPTTLVMGTTPVKSLSKPSAAGKNYRDDIIHRALTDASFPPSTLPIEVDKKASSSPLRKSRKELIY # EALSEDAPMDLVDSSDVEEQYRGPQDVAPYIDNNLGENGVLNAEWIDPRFAASFRSVVNLPLVFLSILHSCFANVFCFVTVPSQLGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1075 ### # start gene g1076 Scaffold_1 AUGUSTUS gene 5183077 5183538 0.98 - . g1076 Scaffold_1 AUGUSTUS transcript 5183077 5183538 0.98 - . g1076.t1 Scaffold_1 AUGUSTUS stop_codon 5183077 5183079 . - 0 transcript_id "g1076.t1"; gene_id "g1076"; Scaffold_1 AUGUSTUS CDS 5183077 5183538 0.98 - 0 transcript_id "g1076.t1"; gene_id "g1076"; Scaffold_1 AUGUSTUS start_codon 5183536 5183538 . - 0 transcript_id "g1076.t1"; gene_id "g1076"; # protein sequence = [MENASLPPPEDILPEGADFQYGDPTELPFIPSPTSTSMVLDPTVNPCTPEPQAPALFIPDSPISSIASSSPLPSSPHY # ITADVELRQMDIESPFNKTLSNVAYAASIPILPVLQCDSMTNLLRSSSVMSVMYSKNMTTSVNSDIHCPICVNKN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1076 ### # start gene g1077 Scaffold_1 AUGUSTUS gene 5184474 5185439 0.58 - . g1077 Scaffold_1 AUGUSTUS transcript 5184474 5185439 0.58 - . g1077.t1 Scaffold_1 AUGUSTUS stop_codon 5184474 5184476 . - 0 transcript_id "g1077.t1"; gene_id "g1077"; Scaffold_1 AUGUSTUS CDS 5184474 5185219 1 - 2 transcript_id "g1077.t1"; gene_id "g1077"; Scaffold_1 AUGUSTUS CDS 5185274 5185439 0.58 - 0 transcript_id "g1077.t1"; gene_id "g1077"; Scaffold_1 AUGUSTUS start_codon 5185437 5185439 . - 0 transcript_id "g1077.t1"; gene_id "g1077"; # protein sequence = [MAADLAAKLPATTNAEEAMHATIYRAVGINHPLLKGLDGLLAVEKLFRIESQNALLHVKSHYGKSGRELRKELYQQHG # TTHPSRKHPRGAAKERRRGRREGNPPFWQLKKSSSSLKRHRLVRASTKRPISHSGSDSSSSEHLPPYPHHSHVIPSSDDSDNEPAKTANELHKAQQKI # QLMSPTKLNARPSQPDFGPIKSTTTSELPSAKWDRNSCWLDSSMEVLFCAMAFHNTFKEFENLVLTEKTKATPAPNLLPVSGIQIPARPGSQQISSSL # SWRSFRDYRGSELISANLAYYKSCEWKSW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1077 ### # start gene g1078 Scaffold_1 AUGUSTUS gene 5185798 5186820 0.45 - . g1078 Scaffold_1 AUGUSTUS transcript 5185798 5186820 0.45 - . g1078.t1 Scaffold_1 AUGUSTUS stop_codon 5185798 5185800 . - 0 transcript_id "g1078.t1"; gene_id "g1078"; Scaffold_1 AUGUSTUS CDS 5185798 5186820 0.45 - 0 transcript_id "g1078.t1"; gene_id "g1078"; Scaffold_1 AUGUSTUS start_codon 5186818 5186820 . - 0 transcript_id "g1078.t1"; gene_id "g1078"; # protein sequence = [MATKRLAVQWATKSNTTRSRNSSVGSSTIAGGKILNKKCLGVLICTVEGCQFIGRPQVESAGLQKQLSARCHCGGQLK # HDHCSSRSYLITWGQQDGDISTTQYRYINGTAHTHSRLPGVVRTTAAEDQRFRTVYENRPNATSTQLMVGAPAPQGFGPSAADLGQKFSQRAYTSYRL # NQEKKKDGNGPTSAFGNLQNLQKWKGKHSTVLCKDYVSSDIVCISLQTEWMQQQTLPDMSDVGDPLHGLLSDAAHKYWEDPNGRLIVTSIYSPLIEKW # VPVLFTYANGATIAHYEYHFLILIEGIAATALQKNIPITDSLFASVSAIFFSNDISFTKDINTIAC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1078 ### # start gene g1079 Scaffold_1 AUGUSTUS gene 5193531 5193875 0.46 + . g1079 Scaffold_1 AUGUSTUS transcript 5193531 5193875 0.46 + . g1079.t1 Scaffold_1 AUGUSTUS start_codon 5193531 5193533 . + 0 transcript_id "g1079.t1"; gene_id "g1079"; Scaffold_1 AUGUSTUS CDS 5193531 5193875 0.46 + 0 transcript_id "g1079.t1"; gene_id "g1079"; Scaffold_1 AUGUSTUS stop_codon 5193873 5193875 . + 0 transcript_id "g1079.t1"; gene_id "g1079"; # protein sequence = [MLYPMNGGDKDMNQRLTNNRRKKQVSDLRVLVIPIISLPSLPYVDCPPIMTPAHKIIPCYTVVYGRKIFSSPIDDVDV # DNLGALVNNEDVSDNVVTKEIKAKVSYKVRTSDNLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1079 ### # start gene g1080 Scaffold_1 AUGUSTUS gene 5193883 5194368 0.97 - . g1080 Scaffold_1 AUGUSTUS transcript 5193883 5194368 0.97 - . g1080.t1 Scaffold_1 AUGUSTUS stop_codon 5193883 5193885 . - 0 transcript_id "g1080.t1"; gene_id "g1080"; Scaffold_1 AUGUSTUS CDS 5193883 5194368 0.97 - 0 transcript_id "g1080.t1"; gene_id "g1080"; Scaffold_1 AUGUSTUS start_codon 5194366 5194368 . - 0 transcript_id "g1080.t1"; gene_id "g1080"; # protein sequence = [MGNNNAGVYSVASFDSSFARLFPPSIAAQNIDSSRLLVKVLKQIDDDMVAEVKALTIVGQFVASGLLRLPIAKSNDVG # RIKRSIKIREVRGVGDTLPNDDDLFELKPVIVMLQMPGKPLTHIPEFMSEKNLETKRQMMGDTLKLMCDRVGELALEHRFVHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1080 ### # start gene g1081 Scaffold_1 AUGUSTUS gene 5199414 5200655 0.94 + . g1081 Scaffold_1 AUGUSTUS transcript 5199414 5200655 0.94 + . g1081.t1 Scaffold_1 AUGUSTUS start_codon 5199414 5199416 . + 0 transcript_id "g1081.t1"; gene_id "g1081"; Scaffold_1 AUGUSTUS CDS 5199414 5200655 0.94 + 0 transcript_id "g1081.t1"; gene_id "g1081"; Scaffold_1 AUGUSTUS stop_codon 5200653 5200655 . + 0 transcript_id "g1081.t1"; gene_id "g1081"; # protein sequence = [MFRGTVYDLQSLSSPGSAVPAGIHDIDEDIMKHRGKPLPVADSELMRRGLRKESSLGATSLLGYASNLSLPMRQDSND # SYHGEPGLGRRPSAASAVLLGGTGPVGTRNITAINNGNRSTTYHPDLDDVIDVRGDSDEEREAEMDLADVAEEENFQGAEALPTPVSGGVITGVSPYR # MSEAFTSLEGHGLSSPGPLGSDRFPYAVSNHASHPSTSTIATSLYPHTITTKGGSSSLGFGLSNPYASTSTVYLGSLGHLTRPSLDTERETGQDINSS # MRHGRPSLSIESAVDKRGRRMSRGSTLATTYEGFEGENTLVYESPISPGGSYPYSPTSTSYTHDTRAQAKNWQRQSSFLGSESHGYGAGYGFKKAIII # SWDWTMSMLLMRRCRCQDTLIRGKMVMGVIRRSMRCPRRGQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1081 ### # start gene g1082 Scaffold_1 AUGUSTUS gene 5215762 5216313 0.82 + . g1082 Scaffold_1 AUGUSTUS transcript 5215762 5216313 0.82 + . g1082.t1 Scaffold_1 AUGUSTUS start_codon 5215762 5215764 . + 0 transcript_id "g1082.t1"; gene_id "g1082"; Scaffold_1 AUGUSTUS CDS 5215762 5216313 0.82 + 0 transcript_id "g1082.t1"; gene_id "g1082"; Scaffold_1 AUGUSTUS stop_codon 5216311 5216313 . + 0 transcript_id "g1082.t1"; gene_id "g1082"; # protein sequence = [MERYPDYSVDGSAPGTPLPPGEADRFLEQPRASFLESNTGNSVQSTPNNSSPLLVANKHETDHELQQAKPGSGTKRGR # LVILTLVGLGVLAVIVLAVVLPVYFKVIKPRQNQDNLTSGSSASGSSAGSGSVGSGSGNPASPSGATSGGDGSEIIVDGGANFTYKNPFGGYCEFPGI # SITFSST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1082 ### # start gene g1083 Scaffold_1 AUGUSTUS gene 5217594 5218523 0.79 + . g1083 Scaffold_1 AUGUSTUS transcript 5217594 5218523 0.79 + . g1083.t1 Scaffold_1 AUGUSTUS start_codon 5217594 5217596 . + 0 transcript_id "g1083.t1"; gene_id "g1083"; Scaffold_1 AUGUSTUS CDS 5217594 5218523 0.79 + 0 transcript_id "g1083.t1"; gene_id "g1083"; Scaffold_1 AUGUSTUS stop_codon 5218521 5218523 . + 0 transcript_id "g1083.t1"; gene_id "g1083"; # protein sequence = [MQEVFGLLRLAMLGDPTLTLGKVFDGKLTTILIHILSDSRSDFGVTIAGEFSNGYNDCGLFLKGTSSYTPSYGGDCNL # WQDASTWNDTVIDGVKAFALASMDATQNWFFWTWKIGNSTANNRVESPLWSYQLGLEGGWIPTDPREAVGACAAQGVSQPWNQTFQSWQTGGVGAGTI # AATATAEFGVWPPAQISGVAVDQMAFVPTYTPTGSVATLPPPTLTATTKSISEGNGWFDSSDTTSAATAIAGCSYPNAWDAISATVPATVCGGGVVTT # STAAAASTVISASTTGVISVPATTSTTADDTTITQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1083 ### # start gene g1084 Scaffold_1 AUGUSTUS gene 5221644 5224379 0.42 + . g1084 Scaffold_1 AUGUSTUS transcript 5221644 5224379 0.42 + . g1084.t1 Scaffold_1 AUGUSTUS start_codon 5221644 5221646 . + 0 transcript_id "g1084.t1"; gene_id "g1084"; Scaffold_1 AUGUSTUS CDS 5221644 5224379 0.42 + 0 transcript_id "g1084.t1"; gene_id "g1084"; Scaffold_1 AUGUSTUS stop_codon 5224377 5224379 . + 0 transcript_id "g1084.t1"; gene_id "g1084"; # protein sequence = [MSIDIGEEERIVFDPSVWIHKGKTWDNPPLHVFHARDTAFELPLQMKKLLPAPDLPIVDFLQLKFPIQSHSLNIYSLD # SWFSHDSPDTSDQACVDMLWRRSIPSVELLKDLRVARGQKWLDGAKSIRDPRYNRGNDLFPLWALTLWQTLGEMGDDQEQWKLGLETIRQDTVTAAHG # FTTAARIFGQRGWNSDVRSGRFVFSSLTFLSLLCPTMINDDVTQAMTYHLQCRMEEDCNVNSKKHFLAASRFASVLKAAAGKGTYTSKKALPQSLLDI # EELVEENPKIHVWFPVLLNQHEVAFCINFGEKTIAYGELNGLDSIGLRNKSLIHQMYVGDSLKIMPPPKEVIKNVQKWLQARFGGTFREEGNTITHGD # QCDSISCIPITMNTIAHGIFGDSIWIHENRFLDRLWWFQQLVPDGIETVSTFRYIEQVVSTHHISQSNPSLKMRNKAPVKPTLANILNPPSSEEESLN # DLMTFLCDEVEIDMREVQSEVLVGKDSTEVKTSVAVIGVDIKESEKVRGKVETDTSPKEPPCPPAKPLVNAWSFLDGMGNSKSGRLKSATGSSKKKRP # ASPTEHECDAEAKRLRKELGGSKSATSERNARTRVDAGDFDAVKQEAFKQEVRDLVRQISGNSHLMPTFYDDKPRVVHCPNCCRDQIVQKPYKSKRFR # DHFVKCIESQYHTQKSKSATARTPKLTSETVRRKWDIFATRLVLPSGKPKPRSCPGLTETNHPRISIYLRRSAATGGGARSCTRIAKELFNSLYRHLS # RSEKAEVNLMQVHEQRWKNDHQNLRVFSVECLHFSPTLDRGQRSLPCAECTALLKMNEFNNILRKEMPADENYKFTNHAYQNEVLGKHLAKCKGLRDL # FTAAVCAFYFLYHLTKVANRNRMPKTPSLSNLFKASSRESMLTMRFSLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1084 ### # start gene g1085 Scaffold_1 AUGUSTUS gene 5225909 5226833 0.47 + . g1085 Scaffold_1 AUGUSTUS transcript 5225909 5226833 0.47 + . g1085.t1 Scaffold_1 AUGUSTUS start_codon 5225909 5225911 . + 0 transcript_id "g1085.t1"; gene_id "g1085"; Scaffold_1 AUGUSTUS CDS 5225909 5226330 0.48 + 0 transcript_id "g1085.t1"; gene_id "g1085"; Scaffold_1 AUGUSTUS CDS 5226386 5226833 0.94 + 1 transcript_id "g1085.t1"; gene_id "g1085"; Scaffold_1 AUGUSTUS stop_codon 5226831 5226833 . + 0 transcript_id "g1085.t1"; gene_id "g1085"; # protein sequence = [MKARASGYHHTYSNLASLNIMALGHYPSDLVIHTINVQASDQADSLWALLGVSPMSLHDSAIQAPLPGITAFESADDD # MDDSEFDHDDIFDEDFDHEMEELQWLIHLSESNRHSLTTEQQERLECLTNAAVALSIEDRTRLNALEDEMDVDEMYDTFVAEDRQILDDVRAMQIDIP # NINTDQDTSVVIADDDLDDITLQSLISLRERHQTNHAARSVRTRSQTQNQVDSKQSLRQQITRRFYDELKTAQVQGITSGEGRGIRWYGSGTKTTLGN # AANAATVAKATATKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1085 ### # start gene g1086 Scaffold_1 AUGUSTUS gene 5229876 5230400 0.5 - . g1086 Scaffold_1 AUGUSTUS transcript 5229876 5230400 0.5 - . g1086.t1 Scaffold_1 AUGUSTUS stop_codon 5229876 5229878 . - 0 transcript_id "g1086.t1"; gene_id "g1086"; Scaffold_1 AUGUSTUS CDS 5229876 5230400 0.5 - 0 transcript_id "g1086.t1"; gene_id "g1086"; Scaffold_1 AUGUSTUS start_codon 5230398 5230400 . - 0 transcript_id "g1086.t1"; gene_id "g1086"; # protein sequence = [MFRSLAQLGAKGNSTEKKSISPTLRSDIYTTIDQYKAWLAGTRGQAGDGVSYAPMLHTIQKHFPNVAIGLEALGQIEA # EVGVIVGGITNMVLEMSKWEALGGGMAMRTWVDTIVNVYAMIPHGSKKEIIARGIVRGINQHTDYSLMTKEFAARIQIISCLKSRKHSNYLLRHRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1086 ### # start gene g1087 Scaffold_1 AUGUSTUS gene 5231231 5231757 0.63 - . g1087 Scaffold_1 AUGUSTUS transcript 5231231 5231757 0.63 - . g1087.t1 Scaffold_1 AUGUSTUS stop_codon 5231231 5231233 . - 0 transcript_id "g1087.t1"; gene_id "g1087"; Scaffold_1 AUGUSTUS CDS 5231231 5231448 0.63 - 2 transcript_id "g1087.t1"; gene_id "g1087"; Scaffold_1 AUGUSTUS CDS 5231502 5231757 0.72 - 0 transcript_id "g1087.t1"; gene_id "g1087"; Scaffold_1 AUGUSTUS start_codon 5231755 5231757 . - 0 transcript_id "g1087.t1"; gene_id "g1087"; # protein sequence = [MSGRRIRFVPLILILRREIVGLTRSSGYLSFGRQAVRSKLISSGVLENDAYVVIAGPANTYAHYVATLEEYSVQRYEG # ASTIFGQYTLDAYIDKYTSLVPFIADTVTGTPASDAPPAEQTSKAISLQVSLLSIIDCPGTDHRHIAVTCCVRLGSFWF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1087 ### # start gene g1088 Scaffold_1 AUGUSTUS gene 5234956 5235473 0.97 - . g1088 Scaffold_1 AUGUSTUS transcript 5234956 5235473 0.97 - . g1088.t1 Scaffold_1 AUGUSTUS stop_codon 5234956 5234958 . - 0 transcript_id "g1088.t1"; gene_id "g1088"; Scaffold_1 AUGUSTUS CDS 5234956 5235294 1 - 0 transcript_id "g1088.t1"; gene_id "g1088"; Scaffold_1 AUGUSTUS CDS 5235351 5235473 0.97 - 0 transcript_id "g1088.t1"; gene_id "g1088"; Scaffold_1 AUGUSTUS start_codon 5235471 5235473 . - 0 transcript_id "g1088.t1"; gene_id "g1088"; # protein sequence = [MLDQYIRQAHAKGLADKMSCVCTELKGVEGELDGAKFDVVTCVMAYHHFGSVTEITSILVRFLKPNGMLVVVDIEAPS # IPGKAPTDVNSLVVEGLQDLGHVAHKRGFKVTEMKELFEGAGLVSFDMKHLTHVKVEGKFEVDTFLAVGFRPVEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1088 ### # start gene g1089 Scaffold_1 AUGUSTUS gene 5238296 5238688 0.78 + . g1089 Scaffold_1 AUGUSTUS transcript 5238296 5238688 0.78 + . g1089.t1 Scaffold_1 AUGUSTUS start_codon 5238296 5238298 . + 0 transcript_id "g1089.t1"; gene_id "g1089"; Scaffold_1 AUGUSTUS CDS 5238296 5238688 0.78 + 0 transcript_id "g1089.t1"; gene_id "g1089"; Scaffold_1 AUGUSTUS stop_codon 5238686 5238688 . + 0 transcript_id "g1089.t1"; gene_id "g1089"; # protein sequence = [MRASMEPFPLSSDTISSIINNPSLLKQSSYLAQFGISTSQADYILVEGYNKGFKNIFILNAALTTLAFVASVVLIGHK # ELLRGDEEQLKKEAKEALRERAGKDAVGIVEDQSLKMGAQPEDIEMGSMASP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1089 ### # start gene g1090 Scaffold_1 AUGUSTUS gene 5259485 5260453 0.65 - . g1090 Scaffold_1 AUGUSTUS transcript 5259485 5260453 0.65 - . g1090.t1 Scaffold_1 AUGUSTUS stop_codon 5259485 5259487 . - 0 transcript_id "g1090.t1"; gene_id "g1090"; Scaffold_1 AUGUSTUS CDS 5259485 5260453 0.65 - 0 transcript_id "g1090.t1"; gene_id "g1090"; Scaffold_1 AUGUSTUS start_codon 5260451 5260453 . - 0 transcript_id "g1090.t1"; gene_id "g1090"; # protein sequence = [MALNRRGYAGSTPYNPYEKSIITNEQVHSDEDKRQFFEQRGIEILRFIDQIIQRFDLPPISNFEGHQVGGIALLGWSL # GIAFTLAAIANVDSDSISDETRKRLNAHLRAHILLGTAIFSLRSSISPTPQTSEPAVITIGLNLPKDFWAPTHDPLIPASARASLFIHLITCYYDYDK # ETISARDQAGILSTVAPSPSRIPSMFTFTDEERTEIVTPLPQDMHFSHVLQEPLREWYLKACFDEKLRSSLALKNMTVWHVSGDRSYPFIWPAYWLVQ # EDDRKAGQGESGRFVRFKLMEGCNHFVSCFTVHTTRQKFLMLVLDALG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1090 ### # start gene g1091 Scaffold_1 AUGUSTUS gene 5262827 5265562 0.46 + . g1091 Scaffold_1 AUGUSTUS transcript 5262827 5265562 0.46 + . g1091.t1 Scaffold_1 AUGUSTUS start_codon 5262827 5262829 . + 0 transcript_id "g1091.t1"; gene_id "g1091"; Scaffold_1 AUGUSTUS CDS 5262827 5265562 0.46 + 0 transcript_id "g1091.t1"; gene_id "g1091"; Scaffold_1 AUGUSTUS stop_codon 5265560 5265562 . + 0 transcript_id "g1091.t1"; gene_id "g1091"; # protein sequence = [MSIDIGEEERIVFDPSVWIHKGKTWDNPPLHVFHARDTAFELPLQMKKLLPAPDLPIVDFLQLKFPIQSHSLNIYSLD # SWFSHDSPDTSDQACVDMLWRRSIPSVELLKDLRVARGQKWLDGAKSIRDPRYNRGNDLFPLWALTLWQTLGEMGDDQEQWKLGLETIRQDTVTAAHG # FTTAARIFGQRGWNSDVRSGRFVFSSLTFLSLLCPTMINDDVTQAMTYHLQCRMEEDCNVNSKKHFLAASRFASVLKAAAGKGTYTSKKALPQSLLDI # EELVEENPKIHVWFPVLLNQHEVAFCINFGEKTIAYGELNGLDSIGLRNKSLIHQMYVGDSLKIMPPPKEVIKNVQKWLQARFGGTFREEGNTITHGD # QCDSISCIPITMNTIAHGIFGDSIWIHENRFLDRLWWFQQLVPDGIETVSTFRYIEQVVSTHHISQSNPSLKMRNKAPVKPTLANILNPPSSEEESLN # DLMTFLCDEVEIDMREVQSEVLVGKDSTEVKTSVAVIGVDIKESEKVRGKVETDTSPKEPPCPPAKPLVNAWSFLDGMGNSKSGRLKSATGSSKKKRP # ASPTEHECDAEAKRLRKELGGSKSATSERNARTRVDAGDFDAVKQEAFKQEVRDLVRQISGNSHLMPTFYDDKPRVVHCPNCCRDQIVQKPYKSKRFR # DHFVKCIESQYHTQKSKSATARTPKLTSETVRRKWDIFATRLVLPSGKPKPRSCPGLTETNHPRISIYLRRSAATGGGARSCTRIAKELFNSLYRHLS # RSEKAEVNLMQVHEQRWKNDHQNLRVFSVECLHFSPTLDRGQRSLPCAECTALLKMNEFNNILRKEMPADENYKFTNHAYQNEVLGKHLAKCKGLRDL # FTAAVCAFYFLYHLTKVANRNRMPKTPSLSNLFKASSRESMLTMRFSLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1091 ### # start gene g1092 Scaffold_1 AUGUSTUS gene 5266224 5268018 0.81 + . g1092 Scaffold_1 AUGUSTUS transcript 5266224 5268018 0.81 + . g1092.t1 Scaffold_1 AUGUSTUS start_codon 5266224 5266226 . + 0 transcript_id "g1092.t1"; gene_id "g1092"; Scaffold_1 AUGUSTUS CDS 5266224 5267515 0.82 + 0 transcript_id "g1092.t1"; gene_id "g1092"; Scaffold_1 AUGUSTUS CDS 5267571 5268018 0.94 + 1 transcript_id "g1092.t1"; gene_id "g1092"; Scaffold_1 AUGUSTUS stop_codon 5268016 5268018 . + 0 transcript_id "g1092.t1"; gene_id "g1092"; # protein sequence = [MDGLLDQDIKVLSYFSDGTEVERVVQRDFAASAGHYVDINLPNPHDESQEGLHIRVPIYRGVPIVMGQDSKHCLKTFR # NNLFTGARLLTLGNHAAFYELIREMAFAENSPLFHRDVEKLDRQDDNAAARLFSAPALQYLADHYPDQLGVIVYLFVFGEVCDAYQNRHIPHEERIRI # ALRTHYFVCMWQKFIDDLPCYRQDRYCISRESVNILKYLVEALISLVVIHRDYYPDIPLLLWLHSTEICEHVFGISRRDIKDFGLLDFHQMIPKLNVQ # IREAIFNAHLTETNERMKARASGYHHTYSNLASLNIMALGHYPSDLVIHTINVQASDQADSLWALLGVSPMSLHDSAIQAPLPGITAFESADDDMDDS # EFDHDDIFDEDFDHEMEELQWLIHLSESNRHSLTTEQQERLECLTNAAVALSIEDRTRLNALEDEMDVDEMYDTFVAEDRQILDDVRAMQIDIPNINT # DQDTSVVIADDDLDDITLQSLISLRERHQTNHAARSVRTRSQTQNQVDSKQSLRQQITRRFYDELKTAQVQGITSGEGRGIRWYGSGTKTTLGNAANA # ATVAKATATKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1092 ### # start gene g1093 Scaffold_1 AUGUSTUS gene 5269424 5269962 0.53 + . g1093 Scaffold_1 AUGUSTUS transcript 5269424 5269962 0.53 + . g1093.t1 Scaffold_1 AUGUSTUS start_codon 5269424 5269426 . + 0 transcript_id "g1093.t1"; gene_id "g1093"; Scaffold_1 AUGUSTUS CDS 5269424 5269473 1 + 0 transcript_id "g1093.t1"; gene_id "g1093"; Scaffold_1 AUGUSTUS CDS 5269578 5269962 0.53 + 1 transcript_id "g1093.t1"; gene_id "g1093"; Scaffold_1 AUGUSTUS stop_codon 5269960 5269962 . + 0 transcript_id "g1093.t1"; gene_id "g1093"; # protein sequence = [MSKENEANTQLHYANSFHHLVNLLERKSHGLRDEKISVQPATATKTTPNPEDIRAKITLVGVDHVGGDYGYDGIPEPV # RGSGEGDTTRTDLDRENFTNANPSGGTPSRCKEENVDRDEGDLSIDSSNVIGDCVARSVEMGFFKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1093 ### # start gene g1094 Scaffold_1 AUGUSTUS gene 5279479 5279955 0.72 + . g1094 Scaffold_1 AUGUSTUS transcript 5279479 5279955 0.72 + . g1094.t1 Scaffold_1 AUGUSTUS start_codon 5279479 5279481 . + 0 transcript_id "g1094.t1"; gene_id "g1094"; Scaffold_1 AUGUSTUS CDS 5279479 5279955 0.72 + 0 transcript_id "g1094.t1"; gene_id "g1094"; Scaffold_1 AUGUSTUS stop_codon 5279953 5279955 . + 0 transcript_id "g1094.t1"; gene_id "g1094"; # protein sequence = [MIPCPCGLEEHARYSFQKLNTLNKQIPHPGSDASEWADLPSNKQTENPPASPIPSPIPTLLDERITEDAPPHDTPQPP # SQPSTSSIETQTSSTANPSGGEELPSPLDSLRSAMGQLNDTNMVEEDSQKVTEAEPTVEGRKLLVAWMVGQSARSIEVCL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1094 ### # start gene g1095 Scaffold_1 AUGUSTUS gene 5292264 5292826 0.51 + . g1095 Scaffold_1 AUGUSTUS transcript 5292264 5292826 0.51 + . g1095.t1 Scaffold_1 AUGUSTUS start_codon 5292264 5292266 . + 0 transcript_id "g1095.t1"; gene_id "g1095"; Scaffold_1 AUGUSTUS CDS 5292264 5292438 0.51 + 0 transcript_id "g1095.t1"; gene_id "g1095"; Scaffold_1 AUGUSTUS CDS 5292516 5292826 1 + 2 transcript_id "g1095.t1"; gene_id "g1095"; Scaffold_1 AUGUSTUS stop_codon 5292824 5292826 . + 0 transcript_id "g1095.t1"; gene_id "g1095"; # protein sequence = [MKHSTTTTGELLSEQDKRNLAATDEKAAGCSTLPRLTPGISEHTHIVSTSPHNDRQQRLIHETTETTETTETTETTET # TETTETTETNETTETNETNETNETNETNETNETNETNETNETNETNETNETNETNVTYLPDTSSLFAPESYLLGTSSLFAPES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1095 ### # start gene g1096 Scaffold_1 AUGUSTUS gene 5303122 5304633 0.51 - . g1096 Scaffold_1 AUGUSTUS transcript 5303122 5304633 0.51 - . g1096.t1 Scaffold_1 AUGUSTUS stop_codon 5303122 5303124 . - 0 transcript_id "g1096.t1"; gene_id "g1096"; Scaffold_1 AUGUSTUS CDS 5303122 5304459 0.85 - 0 transcript_id "g1096.t1"; gene_id "g1096"; Scaffold_1 AUGUSTUS CDS 5304529 5304633 0.54 - 0 transcript_id "g1096.t1"; gene_id "g1096"; Scaffold_1 AUGUSTUS start_codon 5304631 5304633 . - 0 transcript_id "g1096.t1"; gene_id "g1096"; # protein sequence = [MVSKGQLEQIYATSYTKSTGPPFFNLETQSTDGWPSDVDGDAYLLFLLTGQHVLEDHQAVVDARRNTLNDDHSIGASR # DYDSLIGIADEILVDAAISVYPAPNPAEVLSTSIHVKIRLPSGDVSTNAFKYNSQFTFCSQNHKLVPIHRIPNFQFAVWGNRCQIHIFFPGIASRGPE # DLARQLSKEEKTTFYEIGLRPAIAALLPEDISDWPPTYDGELFRARKQSGHMSYQTKIIPALEVHNVVDRIRKNLEDANIDWAESFFFTHTVRGFKHG # TQHEMNEDEAQLALDVLLSHADLSRDATERGEWWIDVGLELCSDIQSCLQWATTSHYHIVKEVLKISDANASRITSMGSSKYQRDIVSHIMDVAGCRI # EPGSRAQGEYEAAYFQLYTTDKAITYNPEGRHHGKAISTNLAMGPTQPPAFISGLFELFTDAMTRNSSNARIEVRVPIRHATRVLLTIDVDLVRRNLL # AFPSTLVYVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1096 ### # start gene g1097 Scaffold_1 AUGUSTUS gene 5307236 5308526 0.51 + . g1097 Scaffold_1 AUGUSTUS transcript 5307236 5308526 0.51 + . g1097.t1 Scaffold_1 AUGUSTUS start_codon 5307236 5307238 . + 0 transcript_id "g1097.t1"; gene_id "g1097"; Scaffold_1 AUGUSTUS CDS 5307236 5307421 0.73 + 0 transcript_id "g1097.t1"; gene_id "g1097"; Scaffold_1 AUGUSTUS CDS 5307701 5307890 0.71 + 0 transcript_id "g1097.t1"; gene_id "g1097"; Scaffold_1 AUGUSTUS CDS 5307994 5308526 0.94 + 2 transcript_id "g1097.t1"; gene_id "g1097"; Scaffold_1 AUGUSTUS stop_codon 5308524 5308526 . + 0 transcript_id "g1097.t1"; gene_id "g1097"; # protein sequence = [MTLPVTLNLVSRLDLTDSLSGKLIIVDESEDSAIVAEEVEGSKTRRQAKGSKAKAKAKHAPQDEAIHSSGAQVDDTDA # SAAQSFIDETDSGWNSRVETDDADGDGFRDGELNECSTVFVEARSNIYLEYHDDDENFFAAAVATDSSGYDLPASNRKKSKRRKRATPQVVGAASRSV # EENLSTTAVSPVPSTNYSSRTTLLGEIAARTGSMPSTPPLKRKKAESHSDLDGIEISEVSPVLSKRHRRAETESPSRIPTKAKSRFIDLNALNASTRD # PQSHSSSKPDAQVVPLPHSSKVELRIPD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1097 ### # start gene g1098 Scaffold_1 AUGUSTUS gene 5308873 5309532 0.96 + . g1098 Scaffold_1 AUGUSTUS transcript 5308873 5309532 0.96 + . g1098.t1 Scaffold_1 AUGUSTUS start_codon 5308873 5308875 . + 0 transcript_id "g1098.t1"; gene_id "g1098"; Scaffold_1 AUGUSTUS CDS 5308873 5309532 0.96 + 0 transcript_id "g1098.t1"; gene_id "g1098"; Scaffold_1 AUGUSTUS stop_codon 5309530 5309532 . + 0 transcript_id "g1098.t1"; gene_id "g1098"; # protein sequence = [MHESNAEAFSDKTSAPSPARTAVPTSSRAHSFAPSSSRNDMHESNAEAFSDKTSAPSPARTAVPTSSRAHSFAPSSSR # SDMRESSLKPSSSKIATSSSVRTAVVTSTRGRSFAPSSSRTPMHDSNAEASSSKIAASSSVRTAGGSSSRNNSFAALNRNIFTTSPKSRATSKSRCGH # YWRMDIIDVAFSRRNPRIEDESDEEDHSPPRHITQTKKSWTRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1098 ### # command line: # augustus --species=saccharomyces split/input_1/input_1.fa_chunk_0000014