# This output was generated with AUGUSTUS (version 3.4.0). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /opt/augustus-3.4.0/config/ ... # saccharomyces version. Using default transition matrix. # Looks like split/input_1/input_1.fa_chunk_0000012 is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 4000690, name = Scaffold_2) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 Scaffold_2 AUGUSTUS gene 2611 3162 0.98 + . g1 Scaffold_2 AUGUSTUS transcript 2611 3162 0.98 + . g1.t1 Scaffold_2 AUGUSTUS start_codon 2611 2613 . + 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_2 AUGUSTUS CDS 2611 3162 0.98 + 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_2 AUGUSTUS stop_codon 3160 3162 . + 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MADLEADDDNIEMQQYLEHIYMTSKLTPDNRSAARDYGFSESLPIETRSDSRSAHNLKHKLKDGTSKGGSDRHRNHSH # RFEAATSSSGSTTTKYATPPTTASWVQGTTWNDEDTNSPQLKGFSSLLSDQPGELDELDIGLVRPDEQWNYETTTDDHMDIPFPVPLSGSKFDGKRKG # KGKDLGW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 Scaffold_2 AUGUSTUS gene 4306 5502 0.28 + . g2 Scaffold_2 AUGUSTUS transcript 4306 5502 0.28 + . g2.t1 Scaffold_2 AUGUSTUS start_codon 4306 4308 . + 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_2 AUGUSTUS CDS 4306 5502 0.28 + 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_2 AUGUSTUS stop_codon 5500 5502 . + 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MTVNGLPDNYEGHCKILLNDRSDLVSTRNILILYALLRHGNPPELAAETAVHLMYSAALRSSDSSELFHCIKTVYGDV # MSVYQSPMFVSFISRLSPNDVRKKSFPIRGAGSLSIAQSAVKIFGEPLAMLRATHTLNDSRKAMHDVMLSPHRVDYRDRYLSGLQPSHRLSFLRFRES # GVLLHFADHVGSETFQDPNRYVSFLASSSSSLRLPFFRLLFTASGKWVTMDNANPLSSWDVNEVLKTGQAYGLDHADIYGCLFFHVKAQFTEFARRVE # KFHIDIHVSQLDAHVASGLLQKGELNPDLFGINPAFDRIETSNIADYAGIPSVLQDWSAVLNRENKHAVVLVYLMNWVMKRPGASFGMMGEGMGLNLK # GSTNVKVLLERTSSMLVRLNSYEFLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 Scaffold_2 AUGUSTUS gene 7535 10067 0.65 - . g3 Scaffold_2 AUGUSTUS transcript 7535 10067 0.65 - . g3.t1 Scaffold_2 AUGUSTUS stop_codon 7535 7537 . - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_2 AUGUSTUS CDS 7535 8818 0.65 - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_2 AUGUSTUS CDS 8910 10067 0.66 - 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_2 AUGUSTUS start_codon 10065 10067 . - 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MLLNEETGVLTSEDALPAWTKESGVKFVAKPDQLIKRRGKAGLLALNKSRQEAVTWIKERAGKVQKVESVEGPLTSFI # LEPFLPHPADSEYYVCINSDRSGDTILFTHEGGVDVGDVDAKALKLLIPVPTAAAPQTFPGKKAVINTLLSHVPTQARKDALADFIIRLYSVYVDLQY # AYLEINPLICMENSVGKVEIHYLDMAAKLDQTAESIVGQKWAIARDLAIYEGIASSGSGKVTADRGPPMAFPAPFGRSLTKEEAYIQKLDASTGASLK # LTVLNAEGRVWTMVAGGGASVVYSDAIAAAGFANELANYGEYSGAPTEGQTYEYAKTVIDLMTRGAVNEQGKILIIGGGIANFTNVAATFKGIIRALK # EYKSPLIRAKVSIYAMRLLGESLGVPIHVFGPETHITAIVPLALGLVKAGDTAAPKSVSQTAPATPPAKATEIAAENPPVGSIGPDGERTQINDQIVH # FDSVSTSSAGRPWYRPFDSNTRSFVYGLQPRAIQGMLDFDFSCGRSTPSVAAMIYPFGGHHIQKFYWGTKETLLPVYTSVDEAFKDNKHTDVDCVVNF # ASSRSVYSSTMDMLRHPTHSQRIKSIALIAEGVPERHSREILYEAQQKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRAGSVGYVSKSGGM # SNELNNILSFTTNGVYEGIAIGGDRYPGSTFIDHLLRYEKDPECKLMVLLGEVGGVEEYRVIEAVKQGKITKPIVAWAIGTCAGMFKTEVQFGHAGSL # AGSDVETAEAKVCISFLQRFYLSNLYSTFLESCHGRCRFHRSANFRGSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 Scaffold_2 AUGUSTUS gene 17401 17871 0.83 - . g4 Scaffold_2 AUGUSTUS transcript 17401 17871 0.83 - . g4.t1 Scaffold_2 AUGUSTUS stop_codon 17401 17403 . - 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_2 AUGUSTUS CDS 17401 17871 0.83 - 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_2 AUGUSTUS start_codon 17869 17871 . - 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MGKSRNLEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGA # PATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPSHWWLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 Scaffold_2 AUGUSTUS gene 18568 18918 0.76 - . g5 Scaffold_2 AUGUSTUS transcript 18568 18918 0.76 - . g5.t1 Scaffold_2 AUGUSTUS stop_codon 18568 18570 . - 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_2 AUGUSTUS CDS 18568 18918 0.76 - 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_2 AUGUSTUS start_codon 18916 18918 . - 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MSSKTAHTEKPPAATVDVEDIWKQSAKTNSWDSDETEADASNLDANRYPLRDPRHSPYSQTNPSNRVLDPNICSCTVA # ATPSPPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 Scaffold_2 AUGUSTUS gene 20546 20836 0.63 + . g6 Scaffold_2 AUGUSTUS transcript 20546 20836 0.63 + . g6.t1 Scaffold_2 AUGUSTUS start_codon 20546 20548 . + 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_2 AUGUSTUS CDS 20546 20836 0.63 + 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_2 AUGUSTUS stop_codon 20834 20836 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 Scaffold_2 AUGUSTUS gene 21119 21388 0.62 + . g7 Scaffold_2 AUGUSTUS transcript 21119 21388 0.62 + . g7.t1 Scaffold_2 AUGUSTUS start_codon 21119 21121 . + 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_2 AUGUSTUS CDS 21119 21388 0.62 + 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_2 AUGUSTUS stop_codon 21386 21388 . + 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKV # EDEFKDLLELN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 Scaffold_2 AUGUSTUS gene 22078 22563 0.39 + . g8 Scaffold_2 AUGUSTUS transcript 22078 22563 0.39 + . g8.t1 Scaffold_2 AUGUSTUS start_codon 22078 22080 . + 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_2 AUGUSTUS CDS 22078 22563 0.39 + 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_2 AUGUSTUS stop_codon 22561 22563 . + 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MKEQDRSMRTLRSNAVAPEESEKAKRNQFNENMKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRSLK # KPSVTIEDVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRMKSRDRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 Scaffold_2 AUGUSTUS gene 22697 23095 0.36 + . g9 Scaffold_2 AUGUSTUS transcript 22697 23095 0.36 + . g9.t1 Scaffold_2 AUGUSTUS start_codon 22697 22699 . + 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_2 AUGUSTUS CDS 22697 23095 0.36 + 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_2 AUGUSTUS stop_codon 23093 23095 . + 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MNNYVSTLSEDGETEILDEPSRVQMIDTCIRIEDLWQDQADMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERR # NIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 Scaffold_2 AUGUSTUS gene 24254 24553 0.98 + . g10 Scaffold_2 AUGUSTUS transcript 24254 24553 0.98 + . g10.t1 Scaffold_2 AUGUSTUS start_codon 24254 24256 . + 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_2 AUGUSTUS CDS 24254 24553 0.98 + 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_2 AUGUSTUS stop_codon 24551 24553 . + 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MNQQDRPPINLIDETNKQVVNEAIGVEKPINLNTEEVLKYKPVDKKVNPIKAALPDDLELKDTFMVTVMELPELLKHP # KLFVPTGRYTERGRDYRQESS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 Scaffold_2 AUGUSTUS gene 25580 26198 0.41 + . g11 Scaffold_2 AUGUSTUS transcript 25580 26198 0.41 + . g11.t1 Scaffold_2 AUGUSTUS start_codon 25580 25582 . + 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_2 AUGUSTUS CDS 25580 25685 0.41 + 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_2 AUGUSTUS CDS 25858 26198 0.43 + 2 transcript_id "g11.t1"; gene_id "g11"; Scaffold_2 AUGUSTUS stop_codon 26196 26198 . + 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MDELKDGIRDCPALRPINFDWDVYLAVDTSTKLWDVETDASYIKGLLDNPSCGPNATINRWIEHVRNYHFTLIHVKGA # THGPDGLSRITPGGWQTKRPEVNPEDYVEEDGGEPINLLWEMVKRKSRINLMTSKIKLTLEVVVKIMQPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g11 ### # start gene g12 Scaffold_2 AUGUSTUS gene 26658 27080 0.22 + . g12 Scaffold_2 AUGUSTUS transcript 26658 27080 0.22 + . g12.t1 Scaffold_2 AUGUSTUS start_codon 26658 26660 . + 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_2 AUGUSTUS CDS 26658 26661 0.49 + 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_2 AUGUSTUS CDS 26776 27080 0.22 + 2 transcript_id "g12.t1"; gene_id "g12"; Scaffold_2 AUGUSTUS stop_codon 27078 27080 . + 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIG # STCRTHQMNPWVKCQKMNGLNLLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 Scaffold_2 AUGUSTUS gene 27403 28437 0.29 + . g13 Scaffold_2 AUGUSTUS transcript 27403 28437 0.29 + . g13.t1 Scaffold_2 AUGUSTUS start_codon 27403 27405 . + 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_2 AUGUSTUS CDS 27403 28437 0.29 + 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_2 AUGUSTUS stop_codon 28435 28437 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIR # ISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQA # LSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRV # LPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 Scaffold_2 AUGUSTUS gene 28723 29370 0.9 - . g14 Scaffold_2 AUGUSTUS transcript 28723 29370 0.9 - . g14.t1 Scaffold_2 AUGUSTUS stop_codon 28723 28725 . - 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_2 AUGUSTUS CDS 28723 29120 1 - 2 transcript_id "g14.t1"; gene_id "g14"; Scaffold_2 AUGUSTUS CDS 29202 29370 0.9 - 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_2 AUGUSTUS start_codon 29368 29370 . - 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MFCIHDSFHVVESSQHSLSHHWSNKGSNKDEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTP # PAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSASDASFATAQSIPTTGSEDTVVTPTEIAVPVPKTVE # RALLHSLVVLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 Scaffold_2 AUGUSTUS gene 39258 39728 0.32 - . g15 Scaffold_2 AUGUSTUS transcript 39258 39728 0.32 - . g15.t1 Scaffold_2 AUGUSTUS stop_codon 39258 39260 . - 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_2 AUGUSTUS CDS 39258 39728 0.32 - 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_2 AUGUSTUS start_codon 39726 39728 . - 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MSMEQPSSSRLESKKQKSALSRGNMTQAQKLNQAASSTAITVVAVQCLMSIPEQLFGDEPSSNIRTPEGCQPAVQDLQ # WTLGWDHHNGGIPPWVMPNLPVVHGRFCLFSYLGNKRTSPWTGTQLDMESASNTGGRVSGQVAAIERIQGENADPLTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 Scaffold_2 AUGUSTUS gene 48848 49186 0.66 - . g16 Scaffold_2 AUGUSTUS transcript 48848 49186 0.66 - . g16.t1 Scaffold_2 AUGUSTUS stop_codon 48848 48850 . - 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_2 AUGUSTUS CDS 48848 49186 0.66 - 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_2 AUGUSTUS start_codon 49184 49186 . - 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MSSKTAHTEKPPAVTVDAEDIWKQSAKTSSWDSRRDRGRRQQISATVPTPFSLFPNESVKIASSTPTSAPAPVAATLS # PPNQDFSNQIGQIRELLDRANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 Scaffold_2 AUGUSTUS gene 51667 52095 0.54 + . g17 Scaffold_2 AUGUSTUS transcript 51667 52095 0.54 + . g17.t1 Scaffold_2 AUGUSTUS start_codon 51667 51669 . + 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_2 AUGUSTUS CDS 51667 52095 0.54 + 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_2 AUGUSTUS stop_codon 52093 52095 . + 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MTFLPIPQPRLPTPIMSTPVPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARHFMAQFQ # NWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFSVENLSSPCLGPPFRAWYSKDLLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g17 ### # start gene g18 Scaffold_2 AUGUSTUS gene 52614 54271 0.08 + . g18 Scaffold_2 AUGUSTUS transcript 52614 54271 0.08 + . g18.t1 Scaffold_2 AUGUSTUS start_codon 52614 52616 . + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS CDS 52614 52852 0.59 + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS CDS 52941 53351 0.35 + 1 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS CDS 53476 53544 0.46 + 1 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS CDS 53684 53859 0.43 + 1 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS CDS 53943 54271 0.96 + 2 transcript_id "g18.t1"; gene_id "g18"; Scaffold_2 AUGUSTUS stop_codon 54269 54271 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFNTAPCTLVTDNL # SNHSPPYGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPSVDLVPLSLLTSPTSN # VLCWNSSRGSRVPLRPLVPSSPLSAVPLTALNPRARSRSQSGSAKEWFVPDILDPDLDSLPAWTTNWDSAALKWAYGRGLAERIKDEMARLPEPATLA # DYRQEVLRIDNRYWKREETRKREAASGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQI # ADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 Scaffold_2 AUGUSTUS gene 61274 62707 0.87 + . g19 Scaffold_2 AUGUSTUS transcript 61274 62707 0.87 + . g19.t1 Scaffold_2 AUGUSTUS start_codon 61274 61276 . + 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_2 AUGUSTUS CDS 61274 62707 0.87 + 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_2 AUGUSTUS stop_codon 62705 62707 . + 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 Scaffold_2 AUGUSTUS gene 67748 69286 0.6 + . g20 Scaffold_2 AUGUSTUS transcript 67748 69286 0.6 + . g20.t1 Scaffold_2 AUGUSTUS start_codon 67748 67750 . + 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_2 AUGUSTUS CDS 67748 69286 0.6 + 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_2 AUGUSTUS stop_codon 69284 69286 . + 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MHRPREEWAADSPPAGQTLALIAANPWAFASATSDTWVLSTFKQAMKAPEIWLPPMKAEYDTLVAKGCWELVHLPPDA # NLMGGRWTYAIKWGPGGEVLKRKARWVAQGYTQIQGQDYDKTYGAVARMESVRIVLAIIATLRLSLFQVDFTAAFLNSPISHDVYMRQPDGFICPGDE # DKVCKLRKSMYGTMQGSHDWQETLAAGYTTSRADPCIRYRRDGAEYTLTSTYGDDVCGGTSTEAGRLRAVHDLAKRWESSEVTSHVLLGMNVQQDPTT # KSITISQKAYILRMLEHFQLLQVRRRHTPLPPNVKLCEAPTPLPDDDLQFMTGKPYREFVGSILWCQTCTRADISFAAGLLARYQLHPGRSHWECVEW # LAGYLLWSCDYAITYEAPVAGQEHTPGLGLRPKGYSDSDHAGCMDTRRSTSGYVFFMAGSPVSWSSKHQPSAALSSTEAEYIALSRTCQQAVWLQSFL # AEVDLPQEGPVTLLGDNFGSISLMETLSDMLWSNILTSGNTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 Scaffold_2 AUGUSTUS gene 72306 73205 0.43 - . g21 Scaffold_2 AUGUSTUS transcript 72306 73205 0.43 - . g21.t1 Scaffold_2 AUGUSTUS stop_codon 72306 72308 . - 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_2 AUGUSTUS CDS 72306 72524 0.43 - 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_2 AUGUSTUS CDS 73047 73205 0.44 - 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_2 AUGUSTUS start_codon 73203 73205 . - 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MACKLHGTSTDNYKKPRTGTIASVGVIEEIVDDDVASITLSAVLGDGTDSEEEKALVTKLKNIRLHFPPSLVSPEISD # CDIIASICKHIENLATLDTLKETKIDLNRNTIPFLNQSPMSTTYPLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 Scaffold_2 AUGUSTUS gene 81368 83147 0.47 + . g22 Scaffold_2 AUGUSTUS transcript 81368 83147 0.47 + . g22.t1 Scaffold_2 AUGUSTUS start_codon 81368 81370 . + 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_2 AUGUSTUS CDS 81368 81472 0.47 + 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_2 AUGUSTUS CDS 81531 83147 0.86 + 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_2 AUGUSTUS stop_codon 83145 83147 . + 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MVGYDILDSSNNLTRPIMSEPHDYDVLIVGAGFAGAKTLPGLGCGIDTQARSSSFTVSSFVVFITYTRTGARVDSPSP # FYQFSDPELWQDWAYTEKYPDWREIQAYFRYVNDKFDVKRDVVFHSRVASAHWNDLVDRWTVTTEDGRVFRAQFLSLCTGIGSKHHIPMFKGIDTFQG # DVYHSARWPEKYDFKDKRAGIIGTGATAIQIIQEIAPRVAHLTVFQRTPNLALPMRQQSISAEAEEKLKELYPVFFRRRDQTFSGFDYDIDPKSIPDT # TPEERLLAFEEKWETGGLHFWVGSYADLFMNQEANDEAYAFWREKVRERIPDPELQEKLAPMQAPHPWGVRRPSLEQRYFEVYSQPNVTLVDVNKAAI # EEIVLNGLRTSDGTVHELDILVFATGFDMITGGITSIDIRGQDGLSIKDKWANGVKSYLGLASATYPNMFWIYGPQSPAGLSNGPSSIVSFPVEPCIT # LDKELLQEMTSKWIINCIKYMKENKISSIVPTEEAQLAYSEHVDQLGAAALWFKAKNSWYMGSNIEGKKVQMLQFPGGLPAYAKLCNDAATNSYDGFH # LKCSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 Scaffold_2 AUGUSTUS gene 84519 86020 0.44 + . g23 Scaffold_2 AUGUSTUS transcript 84519 86020 0.44 + . g23.t1 Scaffold_2 AUGUSTUS start_codon 84519 84521 . + 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_2 AUGUSTUS CDS 84519 85673 0.44 + 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_2 AUGUSTUS CDS 85730 86020 0.74 + 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_2 AUGUSTUS stop_codon 86018 86020 . + 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MPLYQFSDPEIWQGWTFTEKYPDGREIQAYFQYVDKKFDISRDALFNSRVVSAHWDDSADRWNLTTEDGEVFRGQFLS # LCTGIGSKYYIPEFKGLSTFKGEMYHTARWPETHDYKGKRVGVIGTGATGVQVIQEIAPVVAHLTVFQRTPNMTLPMRQRKLDPDEEDKLKKELYAVS # FGRRHQTFTGLHFDINPKLMFDATPEERTLFFEEHWEKGGFHFWMGSYADLLLNPKANDEAYGFWRKKVRERIPDPELQEKLAPIQPPHPFGVRRPSL # EQSYYEVYSQPNVQLVDVNKTAIEEITPKGLKTSDGVEHELDVLILATGFDMVTGGITSIDIRGQDGISIKEKWADGVKSYLGVASATYPNMFWIYGP # QSPSSFSNGPSTIELTSDWIIQCIKHMKENNISSIVPTEEAQHAYSELVDQLGAAALWSEAKTSWYMGKNIKGKKAQMLQFSGGIPAYAKLCEDSAAK # GYHGFHLKVPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g23 ### # start gene g24 Scaffold_2 AUGUSTUS gene 87539 88108 0.75 - . g24 Scaffold_2 AUGUSTUS transcript 87539 88108 0.75 - . g24.t1 Scaffold_2 AUGUSTUS stop_codon 87539 87541 . - 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_2 AUGUSTUS CDS 87539 88108 0.75 - 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_2 AUGUSTUS start_codon 88106 88108 . - 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MAINIAAERDKADDAIKARDAAVQRLTDAYISIEQKLEIIGRLQNQHQTFDMLMKSSCKSPKESAGVSPSLLEADKLQ # TETAELEGLVDDLRERSKLLKRTIAAVECDSPQVCSHTLHFIPLFNRSRQALNGSAMKSQFTAPALSRTSSDLSVMSFAAAVCPAKTVGELQENDSDL # TVRSVPASTRHIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 Scaffold_2 AUGUSTUS gene 89370 89753 0.6 - . g25 Scaffold_2 AUGUSTUS transcript 89370 89753 0.6 - . g25.t1 Scaffold_2 AUGUSTUS stop_codon 89370 89372 . - 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_2 AUGUSTUS CDS 89370 89753 0.6 - 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_2 AUGUSTUS start_codon 89751 89753 . - 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MPPSGWPSLNGFTVDHDATWSSAVPSSSQHSYVIKEAIFRFPTSADRLFCLSRGSGPLAGGTFHLTQSDRLELANRIE # IKIIVEYWTGNVHTLDSILKVCELRRMENQYGIGILVRTFLISLIREEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 Scaffold_2 AUGUSTUS gene 91106 92971 0.35 + . g26 Scaffold_2 AUGUSTUS transcript 91106 92971 0.35 + . g26.t1 Scaffold_2 AUGUSTUS start_codon 91106 91108 . + 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_2 AUGUSTUS CDS 91106 92971 0.35 + 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_2 AUGUSTUS stop_codon 92969 92971 . + 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MFEAFPSPFHDVLHTNYAASATETQAIHALLAASYEELSNLAEEIDCAQKTLDRFVSRHTLLKAHVDAHLALTSPFRR # LPPEIISEIFIQCLPTDRNPTRSLTEAPLLLTMISKDLRELALSIPQLWTNIHVHLPQCPSNGQVDIDEMDALIHRRREGIEAWLNRSRCLPLSISVH # LSGYGRLTGSDSASHISFLKSIVAFAPRWKRIQLHLSSFFVNLLNTLVNDLKPEDVPWLESVEIFYNSGVENGRASAGVYPSYNGNHKPPLIPLNDLI # IRAPSLQSFAVHHHTQNLHQLQLPWSNLTDLTMQSRRGGSRLTLDQTIHVLASSPNLSTCTLGVMLTSNDSGFEVPDDVTLNSLRALSLYFSLPPSDD # DDNLPASDVENRFHSLFSVIRAPLLSKLAFIAKGFEFRRGLDYIPFQPLLKRSGCKLEDLYLSCPLKSQDVLISCLRTLPTVTNIYLESCTPSQNHSF # DIEWSPTTIQIVDDIFIGHLTVTDSDPTPVCPRLEKLVLTECKHVSEEALVSFAQSRANGAPRCATGEITRLKLLDVRFPRSRTEPAANSTDASLSSK # IDQLHSEGVVVNWKYPAPEIMPSTPIPDSPWEGLPTSPYSGWDPEFLSKHVRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g26 ### # start gene g27 Scaffold_2 AUGUSTUS gene 108008 108688 0.86 + . g27 Scaffold_2 AUGUSTUS transcript 108008 108688 0.86 + . g27.t1 Scaffold_2 AUGUSTUS start_codon 108008 108010 . + 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_2 AUGUSTUS CDS 108008 108688 0.86 + 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_2 AUGUSTUS stop_codon 108686 108688 . + 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MEDSNNQYIHYTGPPSSSNTDPSASSSSTSHNHDNNNAGTNNSNASSSSRTPRPTTTTPQSVLNNALSSSSSAPQPSS # SSSSSMSTLTMTVAPQDTTTTKFVHHYAVPSVPYQYHHYQPAQPAPTLAHANSDRNGSTNGTGNMASNSDAAANTIVPTATSKTPVPLAVSTSVVPSS # ISTSTAVAAANGSGSAGSSTGAGTGSTAPLVATGDWTRDLVHLAKTAELK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g27 ### # start gene g28 Scaffold_2 AUGUSTUS gene 110874 112360 0.25 + . g28 Scaffold_2 AUGUSTUS transcript 110874 112360 0.25 + . g28.t1 Scaffold_2 AUGUSTUS start_codon 110874 110876 . + 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_2 AUGUSTUS CDS 110874 111423 0.25 + 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_2 AUGUSTUS CDS 111684 112360 0.99 + 2 transcript_id "g28.t1"; gene_id "g28"; Scaffold_2 AUGUSTUS stop_codon 112358 112360 . + 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MCSHSSSYALMMEVDLNGIASAWLSQLSHSLDLKNAASCASLFHPNGWLRDLLVFTWNLRTLNGHGQILDYLSSNVES # TTIFELKITEDAYFKPSPGDLPGSVSSGFTFSTPIANGKGLFTLTKVASEPGVWKAFTLLVSLDSLKGHEPIGAEQGVYHGNSLCWSEVREQRARIIE # ANPHVLIVLFQPYPETWPRYTPRDKVADWLEQYAVSQDLVVWMKSQPIPVPSYDKDKKEWDVTIDRDGQILTINPKHIVLATGTLGGPYTPVIEGHDL # FQGQILHSDSYAGGPQFTGKRVVVVGTGNSGADIALDLHVRGAQSVTLLQRSATCVQSSKTVVEMLDQVWSPDVPTEVADYRSAGTPFNLIKQILRER # KDITWEKDKDLLEGLIKAGMDVNLGPDGSGILPLVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 Scaffold_2 AUGUSTUS gene 124062 125228 0.92 + . g29 Scaffold_2 AUGUSTUS transcript 124062 125228 0.92 + . g29.t1 Scaffold_2 AUGUSTUS start_codon 124062 124064 . + 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_2 AUGUSTUS CDS 124062 125228 0.92 + 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_2 AUGUSTUS stop_codon 125226 125228 . + 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPTEKPPAATVDVEDIWKQSAKTNSWDSDETEADASNLDANRYPLRDPRHSLLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g29 ### # start gene g30 Scaffold_2 AUGUSTUS gene 125279 126931 0.89 + . g30 Scaffold_2 AUGUSTUS transcript 125279 126931 0.89 + . g30.t1 Scaffold_2 AUGUSTUS start_codon 125279 125281 . + 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_2 AUGUSTUS CDS 125279 126931 0.89 + 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_2 AUGUSTUS stop_codon 126929 126931 . + 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYDALSGILPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 Scaffold_2 AUGUSTUS gene 144642 145739 0.75 - . g31 Scaffold_2 AUGUSTUS transcript 144642 145739 0.75 - . g31.t1 Scaffold_2 AUGUSTUS stop_codon 144642 144644 . - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_2 AUGUSTUS CDS 144642 145739 0.75 - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_2 AUGUSTUS start_codon 145737 145739 . - 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEADEARRRLAWMKQ # MPEESFANFFICFNKYAPLTGFNNKALVTYLKKGVAPWLPLQVVTGREEPQSYDEWTRVFTKLDGAVRAQAESLRNLHGEKVLQGWLSRFPGLELAPE # APYKSPLRRERDPADVWTSNPKPAVTGRFPNRSNWKEGQQRASAAWGEGESYDCENQEEDEDCCHCRDGGEWTEAVLQAGVTDTGRKWTPEERAEKWR # RRRQELCMRCGRKEHWAKDCPNPESLECPAEDQGSSERASKADSTRGRGTANQGGGRKDDSTRPLEWIRAGIVVEEREGMDDLWNDGVFPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 Scaffold_2 AUGUSTUS gene 157801 158506 0.34 + . g32 Scaffold_2 AUGUSTUS transcript 157801 158506 0.34 + . g32.t1 Scaffold_2 AUGUSTUS start_codon 157801 157803 . + 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_2 AUGUSTUS CDS 157801 158011 0.35 + 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_2 AUGUSTUS CDS 158070 158506 0.99 + 2 transcript_id "g32.t1"; gene_id "g32"; Scaffold_2 AUGUSTUS stop_codon 158504 158506 . + 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MMRLAPSKDLDVFASLRGKVSPAVTSKITTPSPPLEIKPSTPAPKAPVAPPRLIRRNRELENLKTDASSFLASPRSAR # SKDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRSRKVAPAASKGKARQIVVTDEDSASNEVESED # EDEEEDSAPPPKRLKTTSSISGKVYSSFISFYFTNLMGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 Scaffold_2 AUGUSTUS gene 161532 162086 0.85 + . g33 Scaffold_2 AUGUSTUS transcript 161532 162086 0.85 + . g33.t1 Scaffold_2 AUGUSTUS start_codon 161532 161534 . + 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_2 AUGUSTUS CDS 161532 161700 0.85 + 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_2 AUGUSTUS CDS 161782 162086 1 + 2 transcript_id "g33.t1"; gene_id "g33"; Scaffold_2 AUGUSTUS stop_codon 162084 162086 . + 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MFCNHDSFYVVESSQHSLSHHWFQQRFHKEEKSAVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTP # PAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSASDASFATAAEYSHHWF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 Scaffold_2 AUGUSTUS gene 164758 165117 0.89 - . g34 Scaffold_2 AUGUSTUS transcript 164758 165117 0.89 - . g34.t1 Scaffold_2 AUGUSTUS stop_codon 164758 164760 . - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_2 AUGUSTUS CDS 164758 165117 0.89 - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_2 AUGUSTUS start_codon 165115 165117 . - 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQLIRLKRRSFSITLDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 Scaffold_2 AUGUSTUS gene 165362 167053 1 - . g35 Scaffold_2 AUGUSTUS transcript 165362 167053 1 - . g35.t1 Scaffold_2 AUGUSTUS stop_codon 165362 165364 . - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_2 AUGUSTUS CDS 165362 167053 1 - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_2 AUGUSTUS start_codon 167051 167053 . - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MKNRQVKHDFKGKFSFLDELSSDQGEDEYAISFHFDEKQNIVLDGYKRCEQETFSKKELSEAYVLASREHLKSQDEQA # EEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSFFLQNGRIKPKPVRKKVQKRRFVEPILQNFSLGENCDKSESTETTQNQCNNE # NTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINL # IDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQ # ERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVH # SLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQLSRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTIFYEMKYHT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g35 ### # start gene g36 Scaffold_2 AUGUSTUS gene 167230 167706 0.99 - . g36 Scaffold_2 AUGUSTUS transcript 167230 167706 0.99 - . g36.t1 Scaffold_2 AUGUSTUS stop_codon 167230 167232 . - 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_2 AUGUSTUS CDS 167230 167706 0.99 - 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_2 AUGUSTUS start_codon 167704 167706 . - 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDE # EIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAISSVIRETF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 Scaffold_2 AUGUSTUS gene 167829 168428 0.82 - . g37 Scaffold_2 AUGUSTUS transcript 167829 168428 0.82 - . g37.t1 Scaffold_2 AUGUSTUS stop_codon 167829 167831 . - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_2 AUGUSTUS CDS 167829 168428 0.82 - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_2 AUGUSTUS start_codon 168426 168428 . - 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDTIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVQSKD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 Scaffold_2 AUGUSTUS gene 168458 168778 0.63 - . g38 Scaffold_2 AUGUSTUS transcript 168458 168778 0.63 - . g38.t1 Scaffold_2 AUGUSTUS stop_codon 168458 168460 . - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_2 AUGUSTUS CDS 168458 168778 0.63 - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_2 AUGUSTUS start_codon 168776 168778 . - 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEE # LSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # start gene g39 Scaffold_2 AUGUSTUS gene 168823 169677 1 - . g39 Scaffold_2 AUGUSTUS transcript 168823 169677 1 - . g39.t1 Scaffold_2 AUGUSTUS stop_codon 168823 168825 . - 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_2 AUGUSTUS CDS 168823 169677 1 - 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_2 AUGUSTUS start_codon 169675 169677 . - 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLE # TVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTERNYLQALKPKVEDEFKDLLGI # KLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPKVRMELSGH # VSCASRQIIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 Scaffold_2 AUGUSTUS gene 169781 171187 0.93 - . g40 Scaffold_2 AUGUSTUS transcript 169781 171187 0.93 - . g40.t1 Scaffold_2 AUGUSTUS stop_codon 169781 169783 . - 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_2 AUGUSTUS CDS 169781 170423 0.96 - 1 transcript_id "g40.t1"; gene_id "g40"; Scaffold_2 AUGUSTUS CDS 171171 171187 0.96 - 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_2 AUGUSTUS start_codon 171185 171187 . - 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MRLYILKTAYFEEFGESRSLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQASNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGLHLTRLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 Scaffold_2 AUGUSTUS gene 174277 175294 0.6 - . g41 Scaffold_2 AUGUSTUS transcript 174277 175294 0.6 - . g41.t1 Scaffold_2 AUGUSTUS stop_codon 174277 174279 . - 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_2 AUGUSTUS CDS 174277 174813 1 - 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_2 AUGUSTUS CDS 174866 175294 0.6 - 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_2 AUGUSTUS start_codon 175292 175294 . - 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MSASRTTTTTVTSATTAGPSRSRTTNPPRADPVDDDEEELGEDDDEAIRRAEEMVRRMKARKAAAAAKKKAEEEAAKK # AAEEARRQEEAAARELEEQRRLLATAATARSQRGTSPSEVSASPRRPVVEVSKRRSKGKGKAQAQPVDEDPDDGDDDDGDKEPCERCRTKKISCQMQA # GKRSSIICKPCHDAKVRCSYSGRPLTVKREGGSNPTGERLAVLESQVAQLLADNQQLRDGQVKANTYHRHFNRKLDWLITDAARRRRSPLEMPEAGPS # GLSRKRRRVVDSDEEEAREVEKDGEEEEEEMEEEEMAPAEKGKEREA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 Scaffold_2 AUGUSTUS gene 181621 181956 0.54 - . g42 Scaffold_2 AUGUSTUS transcript 181621 181956 0.54 - . g42.t1 Scaffold_2 AUGUSTUS stop_codon 181621 181623 . - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_2 AUGUSTUS CDS 181621 181956 0.54 - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_2 AUGUSTUS start_codon 181954 181956 . - 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVLLRSCTPC # NRARATRCLSAEDEWDSSEVINNTAITPLVPGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 Scaffold_2 AUGUSTUS gene 183189 183932 0.93 - . g43 Scaffold_2 AUGUSTUS transcript 183189 183932 0.93 - . g43.t1 Scaffold_2 AUGUSTUS stop_codon 183189 183191 . - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_2 AUGUSTUS CDS 183189 183932 0.93 - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_2 AUGUSTUS start_codon 183930 183932 . - 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g43 ### # start gene g44 Scaffold_2 AUGUSTUS gene 190953 191309 0.55 + . g44 Scaffold_2 AUGUSTUS transcript 190953 191309 0.55 + . g44.t1 Scaffold_2 AUGUSTUS start_codon 190953 190955 . + 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_2 AUGUSTUS CDS 190953 191309 0.55 + 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_2 AUGUSTUS stop_codon 191307 191309 . + 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MEPPMGIQHPALQLQTRASDPPAPTRHSSRGHIPSRRYLESEEYRVQESTAKDNGKEWTTDRLSEEQPLALISQSPFL # FAAQSGDLWVPQSFKQAMKCPDLWMEPMEREFCTLTDKDC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 Scaffold_2 AUGUSTUS gene 192160 193230 0.99 + . g45 Scaffold_2 AUGUSTUS transcript 192160 193230 0.99 + . g45.t1 Scaffold_2 AUGUSTUS start_codon 192160 192162 . + 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_2 AUGUSTUS CDS 192160 193230 0.99 + 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_2 AUGUSTUS stop_codon 193228 193230 . + 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MGFFKRKRRSSDPTYTEHTYQKRARIRAAAEGEINLFEATASVPSSPTQPPIDDSYNNSIEADEDNSSYSLPPPQIPI # PATLASPVASTSTKVIQEMNSPLSEMEKTPVIRSIGRPLTLSPRKSLQPSAWRLDKEARVEEQMVASAQRRKISKALRRAAAESAKKAQIAAKQGEKA # FRASLIFKNITKPLGEGGFGFKNLQEWVDSFTDAEMSLDQQTESALTRLAKSRGAKLADYFLSRAPEQKELFISEEVKKRLAKKGKAIQTLLSRDHHT # GISELLSEFSLSYLVMELKDTAPTLWEYLWDVAEHPDRRTAVKERNGDIVSEKHMDNQFSKNHKYRSWLQDVQCLQSCAPRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 Scaffold_2 AUGUSTUS gene 196282 196884 0.55 - . g46 Scaffold_2 AUGUSTUS transcript 196282 196884 0.55 - . g46.t1 Scaffold_2 AUGUSTUS stop_codon 196282 196284 . - 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_2 AUGUSTUS CDS 196282 196803 0.93 - 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_2 AUGUSTUS CDS 196879 196884 0.58 - 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_2 AUGUSTUS start_codon 196882 196884 . - 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MSKIGRCVRVFTELGEAILFITQAAYKKHAAEFESGLSGDGSAPEWEPVGTIGGNESEDEIDEVPDLDEVNDEDEGEE # DEENMGGLAVSICLPVTAPCNQVRRVKQRKFRTFIEARDQWFLAWFIITESCRRIPWNKFYGNDSKCKCASFYPTSTHSSFSQAPLRYQASWCSMLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 Scaffold_2 AUGUSTUS gene 204795 207039 0.25 + . g47 Scaffold_2 AUGUSTUS transcript 204795 207039 0.25 + . g47.t1 Scaffold_2 AUGUSTUS start_codon 204795 204797 . + 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_2 AUGUSTUS CDS 204795 205532 0.27 + 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_2 AUGUSTUS CDS 205610 205946 0.55 + 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_2 AUGUSTUS CDS 206096 207039 0.96 + 2 transcript_id "g47.t1"; gene_id "g47"; Scaffold_2 AUGUSTUS stop_codon 207037 207039 . + 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MSLRTNPPRKADNRPTKPTAACAHREHIFDKDDVKDRYHDPDSKYRVCKDQPCPNRYDKITTGYIPSFARLIDRKQED # LILGRGAPPEQVASSSSQKPEGTPEAAPAPEPEYPVFPPPPSPVLDRPSSPISSLPRSSPPPPDPEDPDPGAEVSDPESDDDDDNMSKVFKAFDKVST # LKSDGSNWDTWKNRVELATRSIGFSNHLTSNPKDDTEAWEAKKDDDGNLLNAIVGRLSDQIYRRYKNYENLHSMHCHEPSKVNEHLDKLLEIRDSLEA # RKITIPEEMFNNTIIASIPNIFKPTINALVVVAARTSVPLTTRELVSTIRAEASGHTRGQSGKKESANYAGGNSNRGRGGFNRNRQRGPREFSKKEKN # QPSGSGNNWRSKNKEVGSSATIEEVPESSWAAVEVTTTTSQEIFNFSEIASNYETAFVASHSSGAILFDSGCSSHMTPLQDKLRNTRSVPTRIIQAAN # AETFTSNTAGNLQIDLPINEDGISKSLTLQNTLLCPNTPNTLVSLGKLDDAGYVMVIKDGTLKIINRQGETIGIVPKTNGLYQIPSAEYAYAGKATRM # VSLYEAHCIAGHQNYAYVKHMFKSNQVHGIKLDPKQMEEPECRTCMLAKAARSPISKIRTSPRAEKFGDVFHMDVWGPASVQTLNHYVYTLTVMTKPP # VGWRNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 Scaffold_2 AUGUSTUS gene 208103 209368 0.46 + . g48 Scaffold_2 AUGUSTUS transcript 208103 209368 0.46 + . g48.t1 Scaffold_2 AUGUSTUS start_codon 208103 208105 . + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_2 AUGUSTUS CDS 208103 209368 0.46 + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_2 AUGUSTUS stop_codon 209366 209368 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MKRSHSPKLAAARAILSTGAEQNMFIHQMDVKSAYLYGKLDDNEQIYMKAPPGVDIEVKAGQVLKLKLALYGLKQAGR # RWYMRFREIMTSVGLTRSNFDHAVFYRTDPFCIIFIHVDDMTMLTKTMAVMDTLKKKIRDQIEVVDSGEIHWLLGIEIRRSLHTRSIHLSQRAYIDAI # LSSIMGFADVKPLSIPFDPHIHLTKDQMPTTVEDITYMRDKPYREAVGALQYLSVATRPDITYAVGILAKFLQNPGITHWNAVKRVYAYLKYTRDLWL # TFGGTQAEIEGYTDADGMSQEDRHAISGYVFMLNGGAVSWSSKRQDTISLSTTEAEYIALTHAAKEAIWFRNLLSELFGLSQNQSFSMPTTNPPSLLL # KMIASMPEPNTLIFDTTSSDMSSKKERSALFTALRGHDCRHLYKGASIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 Scaffold_2 AUGUSTUS gene 217191 218211 0.94 + . g49 Scaffold_2 AUGUSTUS transcript 217191 218211 0.94 + . g49.t1 Scaffold_2 AUGUSTUS start_codon 217191 217193 . + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_2 AUGUSTUS CDS 217191 217543 0.98 + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_2 AUGUSTUS CDS 217614 218211 0.95 + 1 transcript_id "g49.t1"; gene_id "g49"; Scaffold_2 AUGUSTUS stop_codon 218209 218211 . + 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MFTLTKSFALLATILIHLHTSAAAPTQARQAPRPSSPSGTGSQFANAPGGQRGAGGASTAPTGSSTPQDVTTGTACAV # STATIDTSGTTLPAPSFAPSFIGLGVGTQNYTCGSAGTYTSTGALAELFDVSCLVGQSSFTSLQSTAFAAWNSSTSTAVSSTSGVLSSANVISSPITL # GQHYFITNPVTGSGLSPKWDFTSNALAGNADAFVVAAKIDDVAAPTGSADVDWLYLTNLTGTTGTLANEIYRIDTQGGQPPASVCVLYEFLFFEIVCL # YCASQCTSGTADITVKYTAMYCEFPFAMSSKFEAPLLIIALL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 Scaffold_2 AUGUSTUS gene 235259 236302 0.55 + . g50 Scaffold_2 AUGUSTUS transcript 235259 236302 0.55 + . g50.t1 Scaffold_2 AUGUSTUS start_codon 235259 235261 . + 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_2 AUGUSTUS CDS 235259 236302 0.55 + 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_2 AUGUSTUS stop_codon 236300 236302 . + 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MADMLHQHEDVYAPPTYPLYHSSTRSHHSKSEHAQGSPPSDIESDCLSTTTTDISYSSPTSESSALPASTPITCHPKQ # RSSSFLTGGSSRSGPRYVPCSLPTTSTLSSTFSDYEGKSTPPTQDDFLLSQFHGSFSRRSESRVSMYSSPSSPGSHSPPSLSALSISPRRERPILPHA # AQGKLLVPEVYVRVPTRPSTSRRESSSSLASLASISSAPGSFTTRNRTGSMASIGSSRASLKSPLARYGGEFGDDEKDQCDLSEEDESACDDDDAPLS # PGLSGFGFASSPKRPMMSDMRAWSFDAYSKPSSGSAFSTVREPRRERRKNAKKVEDRQRYNPDGKKLFLFPTD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g50 ### # start gene g51 Scaffold_2 AUGUSTUS gene 245134 245766 1 + . g51 Scaffold_2 AUGUSTUS transcript 245134 245766 1 + . g51.t1 Scaffold_2 AUGUSTUS start_codon 245134 245136 . + 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_2 AUGUSTUS CDS 245134 245766 1 + 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_2 AUGUSTUS stop_codon 245764 245766 . + 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MYASYLKIDTSVSSLPGPFSVGSSASPVANSLGVSQVHVNRMRTSSNASSASSLSVLSPLASSSTNASSTSLVPSDTQ # SSTSRPASPGVNEPISIMPEYVLAMHDYEPQHNISTCLSFRAGQVIHVLNRDASGWWDGELEGKRGWFPSNYVNADVNPLVETDEAETDIVVRYSLCY # SITSLKTTLASIPQAQSLLLGFSISTCSNAFSEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 Scaffold_2 AUGUSTUS gene 246712 247825 0.34 + . g52 Scaffold_2 AUGUSTUS transcript 246712 247825 0.34 + . g52.t1 Scaffold_2 AUGUSTUS start_codon 246712 246714 . + 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_2 AUGUSTUS CDS 246712 247240 0.39 + 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_2 AUGUSTUS CDS 247401 247825 0.64 + 2 transcript_id "g52.t1"; gene_id "g52"; Scaffold_2 AUGUSTUS stop_codon 247823 247825 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MSCKLLTIVEAVLQHPDVPNHRLESLRTAKDQLYNVTSELAESVRLLTVPLPLAMSDDEEKKILLRSATAALKAGGDL # VFSVKVCLNRSLGERPFIINVPHLGEPGSAEAFRTASYSSSQIVLSLNHSPTTNNYGVDEEEDVTIQPRNAPNLRPDASSGSESSSSGRVSKTSSMRS # EDKIIYGELPTVPSEPTAPIPLTFSNSAGYMFSHDYAVDDIAYNSDGVLVGATLAVLVEKLTPHDSIVDPAFSAVFFMTFRLFCTPLEVVEALIARYN # LVPLSAYLMMISLYGSKEKDSRYGYVSQISSSFARSLLATNPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g52 ### # start gene g53 Scaffold_2 AUGUSTUS gene 247907 248437 0.87 + . g53 Scaffold_2 AUGUSTUS transcript 247907 248437 0.87 + . g53.t1 Scaffold_2 AUGUSTUS start_codon 247907 247909 . + 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_2 AUGUSTUS CDS 247907 248437 0.87 + 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_2 AUGUSTUS stop_codon 248435 248437 . + 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MIYGRKEQKDSGFSPKGDRSRDPGMSLNPPSAPPPSEIPRPLMTKTLLSALRSRNFAAISITDFDPLELARQMTIMES # RLYGQIMPEEILESGQDGSKPPVNVKEMSSLSTAITGWVAESILNERDTKKRTALVKFFIKVADVSSPWMKLQFSDPSIFSVALVSTTTALSVRYWPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 Scaffold_2 AUGUSTUS gene 252763 253553 0.7 - . g54 Scaffold_2 AUGUSTUS transcript 252763 253553 0.7 - . g54.t1 Scaffold_2 AUGUSTUS stop_codon 252763 252765 . - 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_2 AUGUSTUS CDS 252763 253070 0.96 - 2 transcript_id "g54.t1"; gene_id "g54"; Scaffold_2 AUGUSTUS CDS 253211 253553 0.7 - 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_2 AUGUSTUS start_codon 253551 253553 . - 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MLPLTTADLLTHAIVGSVLENLDMERLVREVGAAVAQRILGNNESVDDVARELHERLLLRNESTKKVVIESIYKDSEE # SRHNVAVFTAAPSLADARPLLKRVSIGNISGSITHVPSSPTSSVFSSSGSPPRKVVTDFAAFGAPKNASVFGTAVASSPFSLAGGKAAFGGMRTGVSR # TTFDDDEDEEDDGRQRVELREDSISLDQHVSILLLALYRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g54 ### # start gene g55 Scaffold_2 AUGUSTUS gene 253861 254428 0.62 - . g55 Scaffold_2 AUGUSTUS transcript 253861 254428 0.62 - . g55.t1 Scaffold_2 AUGUSTUS stop_codon 253861 253863 . - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_2 AUGUSTUS CDS 253861 254240 0.62 - 2 transcript_id "g55.t1"; gene_id "g55"; Scaffold_2 AUGUSTUS CDS 254338 254428 1 - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_2 AUGUSTUS start_codon 254426 254428 . - 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MDEDMDFDAGSALQANAPQQSSSYPSNGSDSSQGSYISSATKNIENICGHIFESGKLQAVEDLRIGLVAFRDHPPQDH # TYIVKNFGFSSDISKVQKDLSTLYASGGGDGPEAVTAALVEALNMDWREHASRMVVLIADAPPHGIGEYGDGALSDLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 Scaffold_2 AUGUSTUS gene 260835 262563 0.38 + . g56 Scaffold_2 AUGUSTUS transcript 260835 262563 0.38 + . g56.t1 Scaffold_2 AUGUSTUS start_codon 260835 260837 . + 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_2 AUGUSTUS CDS 260835 262090 0.38 + 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_2 AUGUSTUS CDS 262176 262563 0.5 + 1 transcript_id "g56.t1"; gene_id "g56"; Scaffold_2 AUGUSTUS stop_codon 262561 262563 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MFLPMLKSSPDFRYIGYSTPSGHILWDTETWDKIIFSPTRTPFHRCFAVSNNHYLIGAEIWNIARESRNLFTLGIDPQ # QVMSCAFSCDGQTIALGLTGGLIEAWRIPLSKMVASYQLAPAAESPGLYLSLASSPRSNFIAVCFGIEVYLLHIADDSIVPAGHFRGPYPAYLRAVSY # SPGGQYIACRDNNGMVHVWSPEASIAQMPEFEGSSDSWQSIQSSSCCFIDGRFCISGTHDGTLSIWECDTGAVTQSWDAQSSVNAIAISTDGRFIASS # GFEEARIWSITKVDSAQPLFNLEPEMVIAAPVEAVGFIPSTCAVTFSSDSTMLAISTGFNVDIWKLAEFNNWQRFTQIRTSLTRFIPHDDVALADDFI # RDNSSSLRALRFSYQWLAHSYHKLSVQVPSYFRYQISEAEYAESLQHPDTKYILTPSGIYEVATGKEVVNHERVRRPWEDSKFEELEVQFFWENNKQQ # YKRNGILKTLHPVHYRTGWIADSEDNLCFWIPHSHYHDTWPWTPWYSCASNGDRFGFISRDNSNLVFIHVPGAGAVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 Scaffold_2 AUGUSTUS gene 264847 265287 0.85 + . g57 Scaffold_2 AUGUSTUS transcript 264847 265287 0.85 + . g57.t1 Scaffold_2 AUGUSTUS start_codon 264847 264849 . + 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_2 AUGUSTUS CDS 264847 265287 0.85 + 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_2 AUGUSTUS stop_codon 265285 265287 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MSSLNSRGAWNYSTIAGSGKLGDSTPNVITTGDIGADISRRVSVTPLTPRLTQYKPTTFNLQNMAPPVSPSRIYVHVE # SHELRDIDIEANHPYDRASQAFKQPMFVNTKIRATDKQNYKENDVNSSASTDTVLELVKQDAHVGHNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 Scaffold_2 AUGUSTUS gene 265762 266007 0.39 + . g58 Scaffold_2 AUGUSTUS transcript 265762 266007 0.39 + . g58.t1 Scaffold_2 AUGUSTUS start_codon 265762 265764 . + 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_2 AUGUSTUS CDS 265762 266007 0.39 + 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_2 AUGUSTUS stop_codon 266005 266007 . + 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MISRSEKALAVAKDQVISEAGSLKPDVLTVAADVADTKAVEEAVRQVIEAYDRLDIVIANAGISSPWTKRRSICEYTF # RMF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g58 ### # start gene g59 Scaffold_2 AUGUSTUS gene 266390 267496 0.39 + . g59 Scaffold_2 AUGUSTUS transcript 266390 267496 0.39 + . g59.t1 Scaffold_2 AUGUSTUS start_codon 266390 266392 . + 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_2 AUGUSTUS CDS 266390 266535 0.39 + 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_2 AUGUSTUS CDS 267130 267496 0.98 + 1 transcript_id "g59.t1"; gene_id "g59"; Scaffold_2 AUGUSTUS stop_codon 267494 267496 . + 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MHPGTIKTDSVITAIPYWERIAIDTLELPAATVLRLTDGSGRFDWLSGNVYPAISPESYFSGSSFRDKVVLVVGASKG # IGLSISTFYARAGARLAIVSRSQKALDVAKSQIHLEVGSSAKPEVFSAVADVTDTNTIGEVVRKVMDKYGRLDIVVANAGTSSPWDKRKFYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 Scaffold_2 AUGUSTUS gene 276992 278504 0.72 - . g60 Scaffold_2 AUGUSTUS transcript 276992 278504 0.72 - . g60.t1 Scaffold_2 AUGUSTUS stop_codon 276992 276994 . - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_2 AUGUSTUS CDS 276992 278049 0.73 - 2 transcript_id "g60.t1"; gene_id "g60"; Scaffold_2 AUGUSTUS CDS 278107 278145 0.72 - 2 transcript_id "g60.t1"; gene_id "g60"; Scaffold_2 AUGUSTUS CDS 278306 278504 0.73 - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_2 AUGUSTUS start_codon 278502 278504 . - 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MSSTQPPSEPPSNPEKQPEAPEQSSPNEQTQDAAMDITPDQPAEDTFDDLSEDILSLGTDEILTRIQQSFTLSCWECG # RDVDPEGEEDGANQDLDSMRKGKCAVIKTSTRQTVFLPMIGLVPPEKLKPGDLVGVNKDSYLVLDTLPAEFDSRVKAMEVDERPTETYTDIGGLEKQI # EELVEAIVLPMQEAEKFKTLGIKPPKGCLMYGPPGTGKTLLARACAAQTQACYLKLAGPSLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGT # KRFDSDKSGDREVQRTMLELLNQLDGFSSDERIKVKLFYPFFATSDAIYSQVIAATNRIDILDPALLRSGRLDRKIEFPLPNETARARILEIHSRKMT # LSEDVNFEELARSTDEFNAAQLKATCVEAGMMALREGASKLTHEHFLTGIAEGELDLIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 Scaffold_2 AUGUSTUS gene 278606 279245 0.4 + . g61 Scaffold_2 AUGUSTUS transcript 278606 279245 0.4 + . g61.t1 Scaffold_2 AUGUSTUS start_codon 278606 278608 . + 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_2 AUGUSTUS CDS 278606 278695 0.4 + 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_2 AUGUSTUS CDS 278746 278931 0.4 + 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_2 AUGUSTUS CDS 278979 279245 0.71 + 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_2 AUGUSTUS stop_codon 279243 279245 . + 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MAEDVKTRYEAIKKELLAQIPKKRAIDKKLAQVEAQIFTLEGSYLSETGTHSGGNLIQGFENYLKNQTTGRRRTEAAE # HDRIFSNSSLTYTRSLELMSEENGDDEFVKQTNTGLTTVVVPPATRSEGLTAAQQNKLMRDKEYQRRKRASTRRSAGTISDDDSVPTLGRRPTKRARL # MDDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 Scaffold_2 AUGUSTUS gene 313615 313914 0.52 + . g62 Scaffold_2 AUGUSTUS transcript 313615 313914 0.52 + . g62.t1 Scaffold_2 AUGUSTUS start_codon 313615 313617 . + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_2 AUGUSTUS CDS 313615 313914 0.52 + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_2 AUGUSTUS stop_codon 313912 313914 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MEEEQQFEYSTLFTSDGQPVQVLDPSPWTTPVVAPARGRSTTRNLTLQSSKPSLAVQVNNPNAEQLRNLSRDPPPHFD # LDTGDHDDQDPPVDPDDPGRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # start gene g63 Scaffold_2 AUGUSTUS gene 321908 322873 0.97 - . g63 Scaffold_2 AUGUSTUS transcript 321908 322873 0.97 - . g63.t1 Scaffold_2 AUGUSTUS stop_codon 321908 321910 . - 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_2 AUGUSTUS CDS 321908 322873 0.97 - 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_2 AUGUSTUS start_codon 322871 322873 . - 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MNNQSQHFIEQLPMSNGYIAILVIVDQSSKQAIFIPTFNTITSEQLAEPFVIYVFSKHGVPNHVTSDHGSEFVSVFFR # ALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSHLLLISEFAYNNAPNASTGITPFFANKGYHPNITVWPEVDMKSDSARDFVV # NLDELHVFLREEILLAQSCYKEQADRKRISHLEFPIGSEVFVLARHIRSTRPTEKFSEKYLGPFKVISQSGTLSYELKLPDYLCQIHPVFHVSQLEPV # TPNPSPNCTQSPPPPIEVDGEEEYNIAEILDSKLDRRYKHCPLRYYI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 Scaffold_2 AUGUSTUS gene 328025 328519 0.65 + . g64 Scaffold_2 AUGUSTUS transcript 328025 328519 0.65 + . g64.t1 Scaffold_2 AUGUSTUS start_codon 328025 328027 . + 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_2 AUGUSTUS CDS 328025 328519 0.65 + 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_2 AUGUSTUS stop_codon 328517 328519 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MSTSRTTTTTSTTVGSISVTGRQPTPPLAPTRPSTPDPSDEERELELQLERTRERNRKRKEEKKKAEEEAKRKAEEEK # QKQKAAERAANARKLEEEAAEKRRRIAAAAAARNRRGPSPGEASTSARRVEVEVPRVVRKAKGKTEMEVSDFCHILTDLLTLSFLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g64 ### # start gene g65 Scaffold_2 AUGUSTUS gene 333279 334965 0.32 - . g65 Scaffold_2 AUGUSTUS transcript 333279 334965 0.32 - . g65.t1 Scaffold_2 AUGUSTUS stop_codon 333279 333281 . - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_2 AUGUSTUS CDS 333279 333608 0.99 - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_2 AUGUSTUS CDS 333692 334085 0.88 - 1 transcript_id "g65.t1"; gene_id "g65"; Scaffold_2 AUGUSTUS CDS 334211 334965 0.36 - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_2 AUGUSTUS start_codon 334963 334965 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNMTIWMTTPAVYRVVNLV # TPVDLVVLVVPAVPAVLVDLVDLVLPYLLTSPTSNVLCWNSSRGSRAPLRPLAPSSPLSAVPLTALNPRARSRSQSGSAKEWFVPDILDPDLDSLPAW # TSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADSSKFFVLTIVI # GNARKLESVRLPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKG # RAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 Scaffold_2 AUGUSTUS gene 336832 337269 0.78 + . g66 Scaffold_2 AUGUSTUS transcript 336832 337269 0.78 + . g66.t1 Scaffold_2 AUGUSTUS start_codon 336832 336834 . + 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_2 AUGUSTUS CDS 336832 337269 0.78 + 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_2 AUGUSTUS stop_codon 337267 337269 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MTSADDFHLISWKNFLGLSAIVLGVMIPVGLRYWFKRGGVTADIEEQDEDTPSSAMTPTPRSAANGAVFLYDEEEEEE # EDQILAAGATRLANKSKDADSRTQLLASEDDIDEDDYTSEDDDGDIILEAGPSLNDSESKLPKLVDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 Scaffold_2 AUGUSTUS gene 340079 340669 0.9 - . g67 Scaffold_2 AUGUSTUS transcript 340079 340669 0.9 - . g67.t1 Scaffold_2 AUGUSTUS stop_codon 340079 340081 . - 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_2 AUGUSTUS CDS 340079 340669 0.9 - 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_2 AUGUSTUS start_codon 340667 340669 . - 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MSVSLSASATVPEATLVSDNSAYQTSVSGIITSSMAQSPLQLVSSRTETARSISPPASLPDVPIASYDPSAPQSSTVS # SRAPLASHNLASSSRLRSYENPDMLSLSVPTTSSNKAVVSVNSASPNLDPITSLPSELRPVPMGPPLSSVSSIPYPGLQLLEHQPQTNLSKFDWSGLL # HDLYMIQVEETRMRPSGVTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g67 ### # start gene g68 Scaffold_2 AUGUSTUS gene 351778 352657 0.31 + . g68 Scaffold_2 AUGUSTUS transcript 351778 352657 0.31 + . g68.t1 Scaffold_2 AUGUSTUS start_codon 351778 351780 . + 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_2 AUGUSTUS CDS 351778 352410 0.33 + 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_2 AUGUSTUS CDS 352505 352657 0.97 + 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_2 AUGUSTUS stop_codon 352655 352657 . + 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MHQIRVALRGKGVVLMGKNTMVRRALRSILSEYPQYERLLPHVKGNIGLSSPAEISRRFARSLLSNKVAAPARAGAFA # PKDVTVPAGNTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGTRVGSSEATLLNMLNISPFTYGMTVVQIFDSGNSFSPDVLDVDESELIDRF # LTGIKTIAAISLAINYPTIVSVMHTLVNSYKNLIAVKEYLENPDAFAVAAPVADASSAPAAEAAVEETKAEEAEESDDDMVSHFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 Scaffold_2 AUGUSTUS gene 354552 355073 0.43 + . g69 Scaffold_2 AUGUSTUS transcript 354552 355073 0.43 + . g69.t1 Scaffold_2 AUGUSTUS start_codon 354552 354554 . + 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_2 AUGUSTUS CDS 354552 355073 0.43 + 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_2 AUGUSTUS stop_codon 355071 355073 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MHKSLPFDELCALYAVSDVCLVTSTRDGMNLVSLCYPFGFIHVLTLKLLQVSYEYIACQQARQGVMILSEFAGAAQSL # NGSIVVNPWDSQQVADAIHEAVIIDAPTRAENHRKLFKYVNKYSAAFWGTSFIKEMTRIKPGDVGKEKEGQAVLTAKGEAGGFGHSVPGPPSIKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 Scaffold_2 AUGUSTUS gene 360364 361284 0.94 + . g70 Scaffold_2 AUGUSTUS transcript 360364 361284 0.94 + . g70.t1 Scaffold_2 AUGUSTUS start_codon 360364 360366 . + 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_2 AUGUSTUS CDS 360364 361284 0.94 + 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_2 AUGUSTUS stop_codon 361282 361284 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MGQDTGSSHRRKGSTATDNSFASSNTETGTDPDSHSPRGTNELSQIKTNTTEVTRIPSRSRSRESTSPLRKGKGRASP # DDDAAQIHEDGLKAQVELIEDEDIIPAPFAFSPLTLARLLDPKSYDSLASLGGQDGLLQGLGADPTRGLHVGAVRNNRDSHENIHESDVGKTEVTKQG # VGGDELGAGEGVSHRHPPLTPAIVLTQPDAEDGEGAIVKAGSTPSINSYPLKEKDPIPSAAFDIQTFDASGAFPVKFRKEKRNIWSQYTSSQEKQVIT # CVDGSCDEGQGFNFAKYSRSSEFGVGFFPRFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g70 ### # start gene g71 Scaffold_2 AUGUSTUS gene 362447 364258 0.67 + . g71 Scaffold_2 AUGUSTUS transcript 362447 364258 0.67 + . g71.t1 Scaffold_2 AUGUSTUS start_codon 362447 362449 . + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_2 AUGUSTUS CDS 362447 364258 0.67 + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_2 AUGUSTUS stop_codon 364256 364258 . + 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MANATVVCTDKTGTLTQNDMTVVAGSVGIHAKFVRTLKENEGRTNAEEKPSQAAVAAATRKHIHDFSLDQSQLNTILS # PATQELFNEAIAVNSTAFQDADPNTGEMVFVGSKTETAFLKFASELGWPDYRETRTAYGLSAGDEDSDSKEGLARSKGKVLQMIPFSSERKSMGVVIS # TGGRYRFYVKGASEILSKKCTKHIVVGRPGQDRPAYEDDRIETREIDELAADNISRTIIFYANQMLRTISVCYRDFEQWPPAGMAVDEEGEADFNDLA # QDLTLVAIAGLEDPLRDGVREAVSKCHRAGVTVKMCTGDNVLTARSIASQCGIFTKGGIIMEGPVFRKLSQPEMIEIVPRLQVLARSSPEDKKVLVET # LKHIGDLVGVTGDGTNDGPALKTANVGFSMGIAGTEVAKEASDIILMDDNFASIVKAIMWGRCVNDAVRKFLQFQLSTNVTAVVITFVSAVASNEEES # VLSAVQLLWINIIMDTFAALALATDPASEALLNRKPESKNAPLFTVDMYKQILFQSTYQIIITLILHFLGLQVLGIESSTTNNTIVQTMVFNTFVFAQ # IFNSVSSRRLDRKLNIFEGVMRNWYFIAITLIGNL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g71 ### # start gene g72 Scaffold_2 AUGUSTUS gene 366992 368603 0.93 - . g72 Scaffold_2 AUGUSTUS transcript 366992 368603 0.93 - . g72.t1 Scaffold_2 AUGUSTUS stop_codon 366992 366994 . - 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_2 AUGUSTUS CDS 366992 367416 0.96 - 2 transcript_id "g72.t1"; gene_id "g72"; Scaffold_2 AUGUSTUS CDS 367517 368603 0.93 - 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_2 AUGUSTUS start_codon 368601 368603 . - 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MNSLSLTIIALHLYPYFLSILFLTQHASSVYTALPSHEEVNSRELADAFGSEDEDEMTTFQNHHTPQFRDNMDVEAYA # GLPPATPSAVPGTYDFERDYDVPPPGSPPPSSRALPNNFSNNIGFLPTSPIRHTFDRRPRNSFFRRIMGAVLPTHYSQIPTEDSPESVGPRHYVGGGS # DNDGVFANVMAKPAPASESRIVRDPNGNIHLVPEENQKEPPPSYAAAQADAVPAYWETTVHAPALTNGGEGADGTMLIDDLPSGSVWVFFVNLIISFF # FQFVGFLLTFILHTSHAAKYGSRAGLGLTLIQYGFYSRSASVAGWNVDGNGDGVEIITTDRTDPPIPSSLLNDTGIVDPSEQEVVPGVSWFLLLSSTI # SFWRVKRWESSIRSSTSSTATSAPHSNEQSTPDSQFLTQAELENDVVMRRNLASVFGINFDDEEQTARDAIIANGGGGTLGGGAVGGGVFGWGASAGR # LLVDQNGHAIVIPGQEALEEARLARDLRAAGLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g72 ### # start gene g73 Scaffold_2 AUGUSTUS gene 370870 371487 0.47 - . g73 Scaffold_2 AUGUSTUS transcript 370870 371487 0.47 - . g73.t1 Scaffold_2 AUGUSTUS stop_codon 370870 370872 . - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_2 AUGUSTUS CDS 370870 371487 0.47 - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_2 AUGUSTUS start_codon 371485 371487 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MENHRLDFNRTFRLLSFFKPPASDNDNARFIQQLLDNVSPTDRQMLNMDSARKEWDEWLARFKGRIEEDQIFCKDDAG # NVASAVSLDDAYELRVKEAKKTNPRFVLRQWVLEEIIKRVESDPEKGKRQLAKVMHASSFSFHEIFFARPIYIPQMACSPFEAWGAEWEEMSEDGNGE # GLSVEEKEERRYCDIGEGSMLGFQCSCSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 Scaffold_2 AUGUSTUS gene 372892 373525 0.22 - . g74 Scaffold_2 AUGUSTUS transcript 372892 373525 0.22 - . g74.t1 Scaffold_2 AUGUSTUS stop_codon 372892 372894 . - 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_2 AUGUSTUS CDS 372892 373289 0.97 - 2 transcript_id "g74.t1"; gene_id "g74"; Scaffold_2 AUGUSTUS CDS 373360 373525 0.22 - 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_2 AUGUSTUS start_codon 373523 373525 . - 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MTVNITKYKISSLPIPPSSHLLTHNLVPDPVTGGTSVSNFIEKILAKTPSVQRRAPPSPDESESIDDKGAYVEKWLAD # REARNPKADAISGSSSKLQLHYSVLPENDQPRILIGLSETGLRDCVPHLDVGDAFAILGEPALVVSDTEGDGSNHESDQEEIIAARQEMIDVLGGRAV # LMSQRLPQIGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g74 ### # start gene g75 Scaffold_2 AUGUSTUS gene 375759 376715 0.98 - . g75 Scaffold_2 AUGUSTUS transcript 375759 376715 0.98 - . g75.t1 Scaffold_2 AUGUSTUS stop_codon 375759 375761 . - 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_2 AUGUSTUS CDS 375759 376715 0.98 - 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_2 AUGUSTUS start_codon 376713 376715 . - 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MLRLSIPWYVPCLPFWVSNNNHPPQTASQVSSLQSAISSFDSSPDMSLEKSGNHSSSSEISQTAIITSLFGWTLAPER # PRSTSTSRSNSRLPSASRTPSLSRSTSVVPVGSPDRSRPLLHTAVSQAMARDTSLVHCVLCQRRVGLWAFAPPKQPPATSLEASEASSPQQPKRNNSI # LNKRQFDLLKEHRSYCPYVVRSTVVPTLPSSPSVVSVSTPRTSNLHIRSSSSTSQLNGTSGARAGSNATEGWRAILAVVMRYRMAQRHQLSRIEGLMT # GDDAEGQRSSQDSIGVDDGVDMMVQGVKARGVRRSSSTPRYFCL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 Scaffold_2 AUGUSTUS gene 386872 387171 0.75 + . g76 Scaffold_2 AUGUSTUS transcript 386872 387171 0.75 + . g76.t1 Scaffold_2 AUGUSTUS start_codon 386872 386874 . + 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_2 AUGUSTUS CDS 386872 387171 0.75 + 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_2 AUGUSTUS stop_codon 387169 387171 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MKSKTVASILRHVASKIPSTDVEPKTVEAAPAPIDVGDKDSKKARRAARQAAHDEDGAEELPVSTGNEEDRLEMLYEQ # IAWPLGKTYGHPYDAFKLSLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g76 ### # start gene g77 Scaffold_2 AUGUSTUS gene 389960 391581 0.51 - . g77 Scaffold_2 AUGUSTUS transcript 389960 391581 0.51 - . g77.t1 Scaffold_2 AUGUSTUS stop_codon 389960 389962 . - 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_2 AUGUSTUS CDS 389960 390901 0.92 - 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_2 AUGUSTUS CDS 390976 391581 0.52 - 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_2 AUGUSTUS start_codon 391579 391581 . - 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MKTIQTLNILLTHLLSTSFKFLFPRTASFSEDAVVQQPGKKKRQGKKIQKKDKDPSDLRSDPTAGSSKPPLSLVEEFS # PEFWTSLERLFGILTTSILEPILKSFVSLSQHYLSTTFAPENQGIGKADSSPFCRFSDIRPDLLSLVQSGCNQISQAIVLFNSIDSLPRSRAQSTRDS # GYACYVSGVREYLSLVAVRELFRSFASCSRPQRSGYIYVHEISYQRRTSTPSSSGEISASTTEQKPVPESSSANTQSKEFAAAPKPVSQHPRARTREA # RIRDLARKDAVWYLATVLHVLFEDGCFSDDVNDIGGIDTDEVGATITSVPSFEMNASSTNPGLNPNGDKSPDVSVPSESNSLSTSSGSKGLNHEIIPP # ASVHLKVDNISQKYSSLNPNEAARSSLSLLRTGLLDSFDALLFLVTECRPAASFPVSQGCNGSFAMIDINAATSNASANNVEDSMPGDTSGEAGGGTA # NLHRTVTPSSGSCTRQLAFNLGSGIMDEVEYDMVLGLSRGIGSAH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 Scaffold_2 AUGUSTUS gene 396931 397392 1 + . g78 Scaffold_2 AUGUSTUS transcript 396931 397392 1 + . g78.t1 Scaffold_2 AUGUSTUS start_codon 396931 396933 . + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_2 AUGUSTUS CDS 396931 397392 1 + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_2 AUGUSTUS stop_codon 397390 397392 . + 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MRPAAGIVGVVANPIQGAWKSAQTTLVKEQDEPHYQTRVEEGLQAVKFSTENERVKVVKRFKDLMQKEKVMDRKKNIA # KAAEEVMYESEKEEKLKVGKGMPSSSASISTGSPPSDLDLKEGEDRTTRNTNTPQDEAMFERDLELAKRLSLYEQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 Scaffold_2 AUGUSTUS gene 398001 399014 0.99 - . g79 Scaffold_2 AUGUSTUS transcript 398001 399014 0.99 - . g79.t1 Scaffold_2 AUGUSTUS stop_codon 398001 398003 . - 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_2 AUGUSTUS CDS 398001 399014 0.99 - 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_2 AUGUSTUS start_codon 399012 399014 . - 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MSTNPSHILIARNSNNYYSVSRGPNNPSASLSSPTETHVHAAASASGAGISPYLLSESEPEEGAEETDGGEEDIEIHE # TFTKNAKFPGTVKIIVENTTFWTHKEVLVFASPFFEAALSGNWSETETEGKEGTDEEHSQRLSGRPPSIITISHSIGPDSETEMRVTFDPVKENDIDI # DRSRSDTLTKLQDSSPPPTAVIVLQEERPSTFHDFLQYIYPHLSCIITWNNVEPLIHISHKLLQPSLQRDCLTFLLTHAAGKPIKAMRIAELFEEEEL # YKESSRYGFPTFYTVTAIIPDIGLYWIIPVAGPKMKCAPLPKKPYSNSKSAETGFLNVFSKSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g79 ### # start gene g80 Scaffold_2 AUGUSTUS gene 399103 401807 0.08 - . g80 Scaffold_2 AUGUSTUS transcript 399103 401807 0.08 - . g80.t1 Scaffold_2 AUGUSTUS stop_codon 399103 399105 . - 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_2 AUGUSTUS CDS 399103 401051 0.81 - 2 transcript_id "g80.t1"; gene_id "g80"; Scaffold_2 AUGUSTUS CDS 401101 401277 0.71 - 2 transcript_id "g80.t1"; gene_id "g80"; Scaffold_2 AUGUSTUS CDS 401366 401807 0.13 - 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_2 AUGUSTUS start_codon 401805 401807 . - 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MTEKSGVNPILDLVQTNGFTKSIPDIKLAHARQNSSNTANQIVGYIPDPIRVSPCTPKSQLRLSKISMDSNHSSSTRI # MPSRVLQALDTCERRSPNISRCHSIYMHFFEKAFALRAAMDQVLSLSDLAGLSRRPGRNLKRQHSSSSPSLLFLTSSDESTFTSAEVSDLGPSRQESS # SDFEEAVVESQFAFNIPDDGVLGKDDEQGHSSDNNRFATWTVYPNRKTDSPEMVRHIGPADRSLPRLSEPKHLNVTLTSPSYHVASENPMEYPHISNL # SSQTTPGSNIFDYEDPWMAIGVMLGVEKTPLKPLKKRDFRKILAEIPTPVATPTSNVNIFATNHLVPDLIIAGSSSPSQLSDSKVRVSPSTHANTDAA # QNPFRIFSPSVRKQPIFPNAFHSLVPYSSDEAIFDHLSSSTHVNRSQPVSDFSIDQGRGIVNQTQSDMLTNIRPRSGSSKFSSPNYGREGKADSSYLV # SEHELPLLPNLRNDLDDVNTNDHRASNRAADLSSSPLFGRSLYSSSSHTRRGQALPLDLHRRQRHELTHTHDLHHVQGGLSNFQEVAASQGGDPSSPL # LTPIQFALSPRRLNFDPKCHVDFPFSAIAQAADEYLHTPEQRTRIGTYKNTTPHDDTDPPTIRLVNTTKQSTAASPSIVNSDVSSPNDLQLHASQSDQ # LRDNRRFASASIPRLNPRTKLSTELDTSLHRAPARYRSPAVCPTNATENLPRTPQTRRSPLFSRFNASHAVPSSQSTLPTLFLNSPARRSARNHSHEN # TSKEIDIQDNRQSTREDNQKTEIPTPARSIVQDSTSKPEDEEVRERGLAESNVGEQPVPSAEAGSEKHSSRVALRFSLFADDEIESDSESE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 Scaffold_2 AUGUSTUS gene 409898 411117 0.68 + . g81 Scaffold_2 AUGUSTUS transcript 409898 411117 0.68 + . g81.t1 Scaffold_2 AUGUSTUS start_codon 409898 409900 . + 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_2 AUGUSTUS CDS 409898 410649 0.68 + 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_2 AUGUSTUS CDS 410766 411117 0.96 + 1 transcript_id "g81.t1"; gene_id "g81"; Scaffold_2 AUGUSTUS stop_codon 411115 411117 . + 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MEKVGKEGVITVKEGKTIEDEIEVTEGMRFDRGFISPYFITDVKGQKVEFEKPLILLSEKKISALQDILPALELAAQS # RRPLLIIAEDIDGEALAACIVNKLRGQLAVAAVKAPGFGDNRKSILGDLAILTGGTVFTDEIDIKLDKATPDMFGTTGSVTVTKEDTIFLNGEGSKDA # IQARCEQLRALIADPTTSDYDCTRLQERLAKLSGGVAVIKVGGSSEVEVGEKKDRYDDALNATRAAVEEGILPRWTLVFPLSVVLFQVHPAPSLTTLA # RNLVSLLAHFSQHTVPLISLPGDMTLASEYVDMIKAGIVDPLKVVRTALVDAAGVASLLTTSECCVVDAPEEKPAAPMGGMGGMGGMGGMGGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g81 ### # start gene g82 Scaffold_2 AUGUSTUS gene 417036 417839 0.55 - . g82 Scaffold_2 AUGUSTUS transcript 417036 417839 0.55 - . g82.t1 Scaffold_2 AUGUSTUS stop_codon 417036 417038 . - 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_2 AUGUSTUS CDS 417036 417839 0.55 - 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_2 AUGUSTUS start_codon 417837 417839 . - 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MEPESIADRKHASRLPTSNHDIFGTATRLIDNLRISSPSIHHDFDIRHTEHLESLVIEMEQLQRTIIDHFQVRMQQVS # DVLKEMEDDAQETAVLLESVAHSVDAKLQERGLQPWTRIRMSEDSEITCVSDRFSNSRGLKTKSSLSIPKSLESTASSANGSSTASAEKKAAPSTTSR # FVAWIKRKTSANALAKVSNPSPTLLQKDAPKQTFTDRGESDLDMMRTSIESALRTSVFPLRAAGRDLESLRESIASVSIQPFLFLLTKICK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 Scaffold_2 AUGUSTUS gene 423057 423698 0.69 - . g83 Scaffold_2 AUGUSTUS transcript 423057 423698 0.69 - . g83.t1 Scaffold_2 AUGUSTUS stop_codon 423057 423059 . - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_2 AUGUSTUS CDS 423057 423698 0.69 - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_2 AUGUSTUS start_codon 423696 423698 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MIPVPRVRRVMKLEYLFFIVEDYIEGPTLAQVWSTYSLWQKIRVAFTLRSYIRQLRKLKAPRGAPPGPISKDGPRVCT # SPLFGMLDLDQGPFASYADLASFFNEKAKLCYDYNNIPEDHPCRRQKFDDSEELVLSHQDLNPRNIIVGLDGTIWMIDWGWAGYFPPWFEYVAMKEKS # ISEHYYQYWDLFIPFICGPYFEHEIWRLNMARGFSYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g83 ### # start gene g84 Scaffold_2 AUGUSTUS gene 426285 427411 0.26 - . g84 Scaffold_2 AUGUSTUS transcript 426285 427411 0.26 - . g84.t1 Scaffold_2 AUGUSTUS stop_codon 426285 426287 . - 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_2 AUGUSTUS CDS 426285 426544 0.71 - 2 transcript_id "g84.t1"; gene_id "g84"; Scaffold_2 AUGUSTUS CDS 426588 426928 0.51 - 1 transcript_id "g84.t1"; gene_id "g84"; Scaffold_2 AUGUSTUS CDS 427122 427411 0.68 - 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_2 AUGUSTUS start_codon 427409 427411 . - 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MPLPLSAPSSTMGALTGFSGYMTLGLGAKSKPGIVKLNEAESLIIKDSALLCYVRLLRLDFTSIVDEGIIIGKDAKPS # RSETIGWQAPPEEIGSPRSEPSRPSSPAPAPQPSLLANATIRLMSPSLATNHSIFLVTTPTDRATATSEGSSIWQFEMKTWSEQIDELVLAGQYSDAL # KFLESIESKDLSDKVSLRCIPCISISDTFEGRPQGQFDKAIDTFTELNINPAKVVALYPESISGRLSVPRDKWIELYGGPPKQKDVVESPTEGSEADS # KGSETPRIEHERSMTATDEMLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g84 ### # start gene g85 Scaffold_2 AUGUSTUS gene 428732 430202 0.41 - . g85 Scaffold_2 AUGUSTUS transcript 428732 430202 0.41 - . g85.t1 Scaffold_2 AUGUSTUS stop_codon 428732 428734 . - 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_2 AUGUSTUS CDS 428732 429380 0.99 - 1 transcript_id "g85.t1"; gene_id "g85"; Scaffold_2 AUGUSTUS CDS 429428 429462 0.93 - 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_2 AUGUSTUS CDS 429537 430202 0.41 - 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_2 AUGUSTUS start_codon 430200 430202 . - 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MIPHIIHHVSEAAVTFLRVRQALIVLLHIMVYSRDSGFVLLNIPNVQIRSQQSSYSESGTLTIECIYVTPEGQAAINR # NIFLILRINSNEIPLDPRRMITFTAQVQGTHAGQTYVLHGTDLDPEVLELYVPVFDSNDAKALQRQEDLDTLQGIFTEYAGLTELASAHVSHSMPMST # NSPDLRGHLVLVNEDSGDIIGEVDQRVTVYEDPDISRLEKGHEHGPEDWMIKSARLVSQGISQTTNLLVNVVSSASSNYVNRSSPSTSTVPGAKSSPS # SSKAVAFISSSRTRTGLTHAHALTAQAVKVSGKTLSVIDDMIGKMIGTKSSSNTPKGMPVTLPSLNNVVNVPPPPPYSTSPNPLTDSVKPPLPPRKVP # ILSQSGSEKSPLPPRFISTPATAPPASSSALTAKAKLILSADLILSTLDQSVKQLIDVGGRSATRVVGHQLVAHLLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 Scaffold_2 AUGUSTUS gene 434825 435772 0.84 + . g86 Scaffold_2 AUGUSTUS transcript 434825 435772 0.84 + . g86.t1 Scaffold_2 AUGUSTUS start_codon 434825 434827 . + 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_2 AUGUSTUS CDS 434825 435772 0.84 + 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_2 AUGUSTUS stop_codon 435770 435772 . + 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MYPAVPTFYTTGIPSSSSSSGALPSPPTMISQPQTFVVPMGSHAYYAPPPPGQYPTTSYYSYPYGHPGAYYTPAVAPV # VPPPAAPAAPPIVTMTNSGTGNSGAWSDEEIERLKIMAEEKKTGSGEIDWDDIISQWGSTRSRCVEFIGSTGSSLTSPIRHQILIKATQVGLKESSSV # RGVKRRRDVDGDPVSSAAPTPNATTVRNPSSTPSSTPVASPSLQNQQQPPSSNSKASTSVPVIPPGPAGQPWPMPVVAVSTSSPVNIGPSPPDHRVTS # YYRPRPTDPPSRPSSSSGASQLPTVHRYMYQPNGHHSESAK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 Scaffold_2 AUGUSTUS gene 444448 444762 0.94 - . g87 Scaffold_2 AUGUSTUS transcript 444448 444762 0.94 - . g87.t1 Scaffold_2 AUGUSTUS stop_codon 444448 444450 . - 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_2 AUGUSTUS CDS 444448 444762 0.94 - 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_2 AUGUSTUS start_codon 444760 444762 . - 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MSSTSVEIPVQVASSVASSSHISQPNAVSHTIEGSHLPLDSTIVIHDLPATMDAVDNIFGRHCQEQEALPPYIEEPPA # YTPSGSNEPITLAMYLFKFGFREYSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 Scaffold_2 AUGUSTUS gene 446419 446789 0.86 - . g88 Scaffold_2 AUGUSTUS transcript 446419 446789 0.86 - . g88.t1 Scaffold_2 AUGUSTUS stop_codon 446419 446421 . - 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_2 AUGUSTUS CDS 446419 446558 0.98 - 2 transcript_id "g88.t1"; gene_id "g88"; Scaffold_2 AUGUSTUS CDS 446651 446789 0.88 - 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_2 AUGUSTUS start_codon 446787 446789 . - 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MSTASSSNPKTQDKSGQDADDKKKQEARPHLGVLEEDDEFEEFAAADWDDSQTDLAHLGGVAPGAAKSGGDKLWEDNW # DDDDIEDEFSVQLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 Scaffold_2 AUGUSTUS gene 447592 448527 0.98 + . g89 Scaffold_2 AUGUSTUS transcript 447592 448527 0.98 + . g89.t1 Scaffold_2 AUGUSTUS start_codon 447592 447594 . + 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_2 AUGUSTUS CDS 447592 448527 0.98 + 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_2 AUGUSTUS stop_codon 448525 448527 . + 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MSGLDPGQVEAFLRSHPGLLAQLFQQSQVSAHSTQPPSPGVITLDPTAAVTHHSGESSISPSRPSGSTTVPGTVTSAS # STMPGVMAPAPFAGISSNRAVPSLYSFNQPNPSSPMNPSISQPNSFIPTPLIIPHSGVQPSPPIAPAPPITPYSSIQPGPSTAPAPPITPYSGVHTML # GQVVASSEGQGHPRTVTAFPSITTINRANNDRRAHAAASRSAGSTRTRSKAKKPPLLKGPGPRKIEDCILMDQNGVPVVRLDILIYPGFPSVDDRKVC # MLRLASSVNKQIENSNFPSIEFCNWTARQYLSLSPTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 Scaffold_2 AUGUSTUS gene 449899 450216 0.81 + . g90 Scaffold_2 AUGUSTUS transcript 449899 450216 0.81 + . g90.t1 Scaffold_2 AUGUSTUS start_codon 449899 449901 . + 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_2 AUGUSTUS CDS 449899 450216 0.81 + 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_2 AUGUSTUS stop_codon 450214 450216 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MSSTTPISETKRRDLGLFGATVALALVNGYLPEKLNPLLLVYFLSDCQFECLNRTAVMDLFPELGATIDDWLSTPYDD # DSNLNRFQAHFATYHNMECGLIFVVPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g90 ### # start gene g91 Scaffold_2 AUGUSTUS gene 451196 455051 0.13 - . g91 Scaffold_2 AUGUSTUS transcript 451196 455051 0.13 - . g91.t1 Scaffold_2 AUGUSTUS stop_codon 451196 451198 . - 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_2 AUGUSTUS CDS 451196 452979 0.99 - 2 transcript_id "g91.t1"; gene_id "g91"; Scaffold_2 AUGUSTUS CDS 453025 453224 0.95 - 1 transcript_id "g91.t1"; gene_id "g91"; Scaffold_2 AUGUSTUS CDS 454642 455051 0.15 - 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_2 AUGUSTUS start_codon 455049 455051 . - 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MAIDVGCIEEMLFFGGIHFDQWDSEGGYTQIISNPDIPTDDGWEGGRFHLVEFGVFVELNGPTMVTFTGLRLHGGTPP # LAPTGVEIPPWAYRWVVVLYPQAALLDGRVSMNISVDSNGIPMQLTPEMRDVTARASKRICSLICPLDLNSPVDNDADNNPINANTSAENHPAGNINF # TEICLITEPLSQGNSGLQLLNKNSNRPTFQIPFLNQVSIDSLLHVIDILDGGIAGLLLDRSPSMHELFLQVEKLHLAIEKAPLETSTMQLAAGAWPLI # AQLETNSRVHDASALLLHHTIMLTHYRLHEWVCRSIDVSLDYPSTSWWNGLLCLIETAVQEGVPGTKYNFDSSHFLPQINPPRTFQWTVERPQRIRGS # QRLLKTDVCSAVVFHWLNFPADGRHSICSFFLNTLLALTKNPSILLLDAVWHAYNFPSQLRHFPSPPRDSLPSGRDKKRFISDISCHPILGNTRSEET # QQLLEHLRTTHFRFINLSPSSCEALETTIPSTSSSIGPYPTAMGMTQDERYNKFRDCLIEIAQVVPTNHAAGPLNALQIHVLNNLDRNCPFRELATSR # LKVQQADGLFDRHRISTREGIFSGLIFWGILFNIPALWELDNGGFFDSWEAWKQFVLRHEQKGDDYLCNKSAFGRTNGRSHHNAHRFWIASAKLHTKL # QEPGITFTQIIDYIANTKGDDSKSLFVTFGVLSAYLFAVDLVYAGRIPHPSLQEIAAIIPKLDKGALHGLLNLGFASSSSEVEVVPAFIMLFHRLDCD # QKLSPIKKQIGFDFFMLEHSLCKLSRDQWLERY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 Scaffold_2 AUGUSTUS gene 456623 457339 0.99 + . g92 Scaffold_2 AUGUSTUS transcript 456623 457339 0.99 + . g92.t1 Scaffold_2 AUGUSTUS start_codon 456623 456625 . + 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_2 AUGUSTUS CDS 456623 457339 0.99 + 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_2 AUGUSTUS stop_codon 457337 457339 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MSTPIPPATPAPPASAEDLMTQLIKQVANLATAMEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKS # QAKLIKSALGFFTESAGDWATPHLLHFNAEHPPFGGNWEEFLKEFGQRFESVDPGMEARSEIKNLKQSKGQTVAEFAQKFKDIGDRTGMSDIDLRERF # FTALLPEIRQNLIIVNIAQGLAPTLKEAIKRAISVDVYMHDPTMTGRNSGHTPTTCCSHYPC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g92 ### # start gene g93 Scaffold_2 AUGUSTUS gene 458713 461526 0.62 + . g93 Scaffold_2 AUGUSTUS transcript 458713 461526 0.62 + . g93.t1 Scaffold_2 AUGUSTUS start_codon 458713 458715 . + 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_2 AUGUSTUS CDS 458713 461526 0.62 + 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_2 AUGUSTUS stop_codon 461524 461526 . + 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIIS # RLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSSDLQEHRRVVREVLI # RLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPAPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTRKDISFTWMDTQQQA # FDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDH # SNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRINTQADALSRMAAHQVLDNEDNRQQTVLKPNHFTKIAASILRNPLEDRIRKASQREAQVLEG # LKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPADNDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCETCARKKIQRHP # RAVTQPLDVPLGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHALPCTSSITAEGVADIYYKEIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLG # IKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQ # DAGAALHLGKKQQKEGYERGKRKAHQFKVGDFVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPISLDRIHPVFHVDKLYPWKGNTING # EIPPPPEPVYLEDEDEPEYEVEEILDSRVRWKRLEYLVKWKGYDAGHNSWEAPNLSRAPKIVRAFHKKHPTAAKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g93 ### # start gene g94 Scaffold_2 AUGUSTUS gene 465983 466162 0.96 + . g94 Scaffold_2 AUGUSTUS transcript 465983 466162 0.96 + . g94.t1 Scaffold_2 AUGUSTUS start_codon 465983 465985 . + 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_2 AUGUSTUS CDS 465983 466162 0.96 + 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_2 AUGUSTUS stop_codon 466160 466162 . + 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MSYRILDAPEFKKEFEATQKTNAALRGGAPAEASLIEEKKDEAEKEEKEDKDEKKEEKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g94 ### # start gene g95 Scaffold_2 AUGUSTUS gene 467683 468756 0.64 - . g95 Scaffold_2 AUGUSTUS transcript 467683 468756 0.64 - . g95.t1 Scaffold_2 AUGUSTUS stop_codon 467683 467685 . - 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_2 AUGUSTUS CDS 467683 468756 0.64 - 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_2 AUGUSTUS start_codon 468754 468756 . - 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MVRNIFSSVEELYSIYNISVLPSSLFHRNGVITLARSSVIQVLQNWLILGSTTYIPAHYRSAFQDSEFETYLATTMSP # ELQSIPLNCTKGFRMLGPLFESMINASFNIPSMVETELFALKPSDRSVNDFLTSDTRAAFQPMDHPNHHFVLILVNSIHGLPIHPLLPSYITPSLRYC # SPRHRKQVNPYSIPPRPSPDATSESSLPYSQTSPPRFPSPVLGAPSTLHAGPDNIGINHLSDGALPVTDDHSANNGDLVPDGTLHDVAAACHQLGFVL # ESVKYQRRQGRGVSFLNMLNNWTATSNFIVALGYDRNGGLESQKVTFKDGPQSFADLLVTNWDGKFVGYQKKRTFSNGRRRQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 Scaffold_2 AUGUSTUS gene 469632 470141 0.43 + . g96 Scaffold_2 AUGUSTUS transcript 469632 470141 0.43 + . g96.t1 Scaffold_2 AUGUSTUS start_codon 469632 469634 . + 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_2 AUGUSTUS CDS 469632 470141 0.43 + 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_2 AUGUSTUS stop_codon 470139 470141 . + 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MYSRQLDNSHLGRVALIHHDHSGGQRRPRIIINREFLEWAYTQRTTSGIAEYLGVARQTVRQALLDYGIAQPGINPFP # PSEVHSGHTDSENDPVLDQDGTLPQELPDDVRDAAASIASSSSSSSYLSNLSDEDLDRVVQALHSHYARAGIRMLQGMLRRLGHIVPYERV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 Scaffold_2 AUGUSTUS gene 470860 471216 0.38 + . g97 Scaffold_2 AUGUSTUS transcript 470860 471216 0.38 + . g97.t1 Scaffold_2 AUGUSTUS start_codon 470860 470862 . + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_2 AUGUSTUS CDS 470860 471216 0.38 + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_2 AUGUSTUS stop_codon 471214 471216 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MFVQGFRGEALDQFAMSDEELEVFGIDWEGLEDEVLLRSLRKNYAHEDGTSTWLGRHGPPPNLNEVIVDPPSDLLTSE # QLDALNMALRHIPRGSELGQIVDLWTNALAYVRTIYPGYF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 Scaffold_2 AUGUSTUS gene 475627 476511 0.52 + . g98 Scaffold_2 AUGUSTUS transcript 475627 476511 0.52 + . g98.t1 Scaffold_2 AUGUSTUS start_codon 475627 475629 . + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_2 AUGUSTUS CDS 475627 476511 0.52 + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_2 AUGUSTUS stop_codon 476509 476511 . + 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MERTRQLIGKRARGVGKLRPSVVLYNETHKDGEGVGEAVQKDLIGGKGRSGADLLLVVGTSLRVPGTKRMVREFSKAV # HSRGSTSKESTPGSDEPVSQQQQQPLKSVYLNLDFPVPTREWEGVFDVWVQGDAQTFAHMLQEELKKELHAKEVAVEKRRKKEEELALAILSGLPSVK # QKPKAKTKTKEESHDKKRKGFVGEEHEIKRKKLVVEVPTYSQIFFAISSKKISPALPVSHISTTSFSCLAHLRPVSHISITFLSSLTPSPSHNTYTSS # FPNCQTPSQSSSNPTSHLHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g98 ### # start gene g99 Scaffold_2 AUGUSTUS gene 488410 490043 0.08 + . g99 Scaffold_2 AUGUSTUS transcript 488410 490043 0.08 + . g99.t1 Scaffold_2 AUGUSTUS start_codon 488410 488412 . + 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_2 AUGUSTUS CDS 488410 488681 0.12 + 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_2 AUGUSTUS CDS 488754 489110 0.38 + 1 transcript_id "g99.t1"; gene_id "g99"; Scaffold_2 AUGUSTUS CDS 489503 490043 0.92 + 1 transcript_id "g99.t1"; gene_id "g99"; Scaffold_2 AUGUSTUS stop_codon 490041 490043 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MPRLALGSDERKKDAKGYQKVSWEDHRAALKKHKFYSNGLLEVNPNGQHPIFDLIEQSEAAWKAKLKSASRSLHEAVI # EYERRYGRKPPLGWQYVEDNNVQLPDEYDQIDRDLEAYWGIEPQDLQTIEFAHEVLPECDTYTLGKLNLKDSITLLNYSLPHNASVDYDMAEGGKMIM # EMLREAGVDKYIPPFRATFNPHDSPEMLTNRNLCPSVLHHDIISANPMNWFRDLPLGANPAWEDKVDERLHWRGANTGIHYSKSIPWRLSHRIKMMEW # AHHNLYSDLRILGLGVKEGERIGEGTVVEKARWVPAMLDISFTGKPIGCEEEDGSCGQLRDMFEWRKRANFVDAGKFKYILDIDGNAWSSRFKRLITT # SSCIFKATIYPEWYGSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g99 ### # start gene g100 Scaffold_2 AUGUSTUS gene 493235 493720 0.65 - . g100 Scaffold_2 AUGUSTUS transcript 493235 493720 0.65 - . g100.t1 Scaffold_2 AUGUSTUS stop_codon 493235 493237 . - 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_2 AUGUSTUS CDS 493235 493720 0.65 - 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_2 AUGUSTUS start_codon 493718 493720 . - 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MLPLSFKPPKSWSIRSKHVILPNSFSDDVRPHPVFVPPEENAFGKLSHPVVSIARIETPNKWFGRSSQGSLKPNLQRR # GVKVEEVEDENDLPRGSQSTSRSGPRKSEPSSNLEDRIRSMHLNESTPPRTSPTKRNKKPRKSEPTLSSTFFGKCAFLFPFVY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 Scaffold_2 AUGUSTUS gene 496049 498123 0.14 - . g101 Scaffold_2 AUGUSTUS transcript 496049 498123 0.14 - . g101.t1 Scaffold_2 AUGUSTUS stop_codon 496049 496051 . - 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_2 AUGUSTUS CDS 496049 497243 0.99 - 1 transcript_id "g101.t1"; gene_id "g101"; Scaffold_2 AUGUSTUS CDS 497299 497776 0.32 - 2 transcript_id "g101.t1"; gene_id "g101"; Scaffold_2 AUGUSTUS CDS 497835 498123 0.32 - 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_2 AUGUSTUS start_codon 498121 498123 . - 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MESSSLTEMSLLGKRSRQPDELEQLQTPGPTPNPKRTKGTTTPVFDGNGNKENIPPLNLTPVNSSNASTPMSSRAVRA # LRRSATLESFVTPSPARTAVKQSASFSTSFANLTLATPPSTPLTLLPIHARARALLRATSNNNNFFMPARDSEREIITRSITTFLSHSGADASHNLYI # SGAPGCGKTALVNSILNSLELDDTRIVNVNCMALKNIDALWDFLVDEFDGLLQKKRKSGMKKGNGREAVEALLYGMSTRCILVLDELDHIASNPQSIS # SLLSLARSDGLYVIGIANTHTLTSSPSSFTDDIRTLHFSPYTSAQLLQILQSRLSILTSQSSSKSAPDDTLKQLLPLSTLTLLTKKIAALTGDVRTLF # EVLRRAIDLAVLRLQPPELNDDNFFAEAGPVCSVTPTHVLAAITQSTADQTPVQTASTSTASNSEIVRRVASIGFQARLVLLSVLVAVQRIEAGLTID # LSSSRNSSHGSLQNGPEFLATEQDIVVDGSHLHAYYSHILRRGGDASISSPVSRTDFSDLLGMLEGAGLIVLGPSQVSPKKKRVCFGPSASFGRSSAW # SSVRNGGTLTEEVRLAPGVWVDEVLRGLGAGFSSNIKASRDVNEEELNTLWMKEDTIIRKELKAIENKRNAQEGSQMFIDASLDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g101 ### # start gene g102 Scaffold_2 AUGUSTUS gene 498638 499189 0.49 + . g102 Scaffold_2 AUGUSTUS transcript 498638 499189 0.49 + . g102.t1 Scaffold_2 AUGUSTUS start_codon 498638 498640 . + 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_2 AUGUSTUS CDS 498638 499189 0.49 + 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_2 AUGUSTUS stop_codon 499187 499189 . + 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MFRLIQLKTNTIISGSAALQFFDLTVFDDSDLDLYVVNDWDKVALLTGFLTSIAYDYTPRSDQARTFQHAFQAGRRHH # HVEPDLDNDYSDEDIWDVYSFIRASNGKKIQIITCKDNITQVIMKFHSSEYSKVDTKMYQQSLTAFDPSSLRYERNHLHPRLCPLSLCHFRREMLYCY # TDWKVTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 Scaffold_2 AUGUSTUS gene 502993 503535 0.78 + . g103 Scaffold_2 AUGUSTUS transcript 502993 503535 0.78 + . g103.t1 Scaffold_2 AUGUSTUS start_codon 502993 502995 . + 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_2 AUGUSTUS CDS 502993 503535 0.78 + 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_2 AUGUSTUS stop_codon 503533 503535 . + 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MDAAVEVKGASFSWDAPPPEREEKKMRRKNKTITNAQPAATAESPQEPFKLRDITITIPRGQLVAVVGQVGCGKTSLL # QGIIGEMRRTGGSVKFGGSVGYCPQSAWIQVGTDYVSAAFLTFSQNATIRENICFGRAFDEGRYWTAIKNSCLEPDLEMLPHGDMTEVGEKVGFFFFQ # RGSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 Scaffold_2 AUGUSTUS gene 524180 524415 0.6 + . g104 Scaffold_2 AUGUSTUS transcript 524180 524415 0.6 + . g104.t1 Scaffold_2 AUGUSTUS start_codon 524180 524182 . + 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_2 AUGUSTUS CDS 524180 524242 0.61 + 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_2 AUGUSTUS CDS 524317 524415 0.95 + 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_2 AUGUSTUS stop_codon 524413 524415 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MRPAPPITEPKIASELKTRSLDVPTGMPEISFDNEIENEAYCSYGTRCDEQWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 Scaffold_2 AUGUSTUS gene 525963 527129 0.86 + . g105 Scaffold_2 AUGUSTUS transcript 525963 527129 0.86 + . g105.t1 Scaffold_2 AUGUSTUS start_codon 525963 525965 . + 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_2 AUGUSTUS CDS 525963 527129 0.86 + 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_2 AUGUSTUS stop_codon 527127 527129 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 Scaffold_2 AUGUSTUS gene 527180 528832 0.89 + . g106 Scaffold_2 AUGUSTUS transcript 527180 528832 0.89 + . g106.t1 Scaffold_2 AUGUSTUS start_codon 527180 527182 . + 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_2 AUGUSTUS CDS 527180 528832 0.89 + 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_2 AUGUSTUS stop_codon 528830 528832 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNFGNYEGSWDLQTSTDALSGILPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # start gene g107 Scaffold_2 AUGUSTUS gene 529111 530895 0.45 + . g107 Scaffold_2 AUGUSTUS transcript 529111 530895 0.45 + . g107.t1 Scaffold_2 AUGUSTUS start_codon 529111 529113 . + 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_2 AUGUSTUS CDS 529111 530895 0.45 + 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_2 AUGUSTUS stop_codon 530893 530895 . + 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVH # HVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHD # HPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPC # TSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVI # NSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLG # DRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSW # EPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 Scaffold_2 AUGUSTUS gene 532623 534148 0.25 - . g108 Scaffold_2 AUGUSTUS transcript 532623 534148 0.25 - . g108.t1 Scaffold_2 AUGUSTUS stop_codon 532623 532625 . - 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_2 AUGUSTUS CDS 532623 533278 0.28 - 2 transcript_id "g108.t1"; gene_id "g108"; Scaffold_2 AUGUSTUS CDS 533881 534148 0.3 - 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_2 AUGUSTUS start_codon 534146 534148 . - 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MVKISFIHTRSSVSLISSDVGITKKTKIDYKGGQHPVWDSELRFSVKKGTAKKYRELEVSCFAKEHRDDTLLGEAKVD # MTATLKSGEFDAAAPASYRPPGTGRAPQSSPPAVPSILRPGNPQSDPHPSRRSSASPPRQSQLGNSATGSVPYVATHTPNPYTSSSPAPSNYNHNGAL # FYSPSTPVPVSGGGPIPYASPSTPVPPSNRNSSLSYPSNVPSIQPHTHRQSSNPSSILDWNSTSQPEGPLSFPVPNFPGAPSIAVDPTVNGYGNGFYK # QSTVPKSSSCAPTNRIVFAHTTTAGADVEFRQY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 Scaffold_2 AUGUSTUS gene 551321 552028 0.9 + . g109 Scaffold_2 AUGUSTUS transcript 551321 552028 0.9 + . g109.t1 Scaffold_2 AUGUSTUS start_codon 551321 551323 . + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_2 AUGUSTUS CDS 551321 552028 0.9 + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_2 AUGUSTUS stop_codon 552026 552028 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MVELGWHGSCFDPPVETPEGDWFCSECSDNPHLHTDLNVTCDPSNNDQPTLDEYSEIPMRAVSIASSSRSQPAQAKSR # MGASRKRGQAPKAIQFPVGVTDNEELEMEVETRATPLRRTRTKSMQSLKKGKGPALDHSDDDLVTPNARQPKRMRLRLQSPAQPSNNINIPKVRLRIT # QKGKGKAKEREEEESKGLFDDVLGGDERDTSKTVILPSDKQRFERSRAIAEVNSFVSST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 Scaffold_2 AUGUSTUS gene 553404 555053 0.99 + . g110 Scaffold_2 AUGUSTUS transcript 553404 555053 0.99 + . g110.t1 Scaffold_2 AUGUSTUS start_codon 553404 553406 . + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_2 AUGUSTUS CDS 553404 555053 0.99 + 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_2 AUGUSTUS stop_codon 555051 555053 . + 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MQNWEAKGYLKLRAEKLKWSPFLLVRAGAEGEFGVVKKTEAKEAVGTGPFISDNRLTALTTNGLSIEEGSASRGTDTP # LSLFDDDNVVNAAEMEASNLSKSSAQSPQSTLSNKPPLNGRRRMLSKRNSTPERELSPSPRHRRKRANVSTATCGTGDVIADENSSVDILVPQLVPTR # NLEPSSTLKALDVSNKIHQEDVLDDPSEIDNLAGADMPVGPLTLQRISKMSKQNENHTKDEIENGSEKEGNVRLDEKSVEAEESAVEAGHWDTQRKCS # PADHMDIEEAVEAEVVLGRRSISRSSRQVSTLVKRVTRQSSKHSSVASPPPIISVDDELMQLEGTELVPATRPRQLRNFAVAVASDDSGDFLAGPVSD # ELQVNGRKPGKPQQRKQVESVPEHNVHSESPVSVSNPSITDSMEDLFGDGDASLKGSESVEATAATSLLSLLHSKPVVFAALNGDATVDMKHASQSKE # LQDYDVKVEDIDAGSRHSIPSDITVFGSDTQSVRVVTKDDEGVDVEMVDAQGGEDGDLDADGSVDDGEYDIDDNVDADS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 Scaffold_2 AUGUSTUS gene 555554 557173 0.3 + . g111 Scaffold_2 AUGUSTUS transcript 555554 557173 0.3 + . g111.t1 Scaffold_2 AUGUSTUS start_codon 555554 555556 . + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_2 AUGUSTUS CDS 555554 555556 0.47 + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_2 AUGUSTUS CDS 555637 556262 0.43 + 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_2 AUGUSTUS CDS 556306 557173 0.86 + 1 transcript_id "g111.t1"; gene_id "g111"; Scaffold_2 AUGUSTUS stop_codon 557171 557173 . + 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MNGQPAQQPKESYLAYGVPSASQVKRKHIADGVLNQTNNKRRRDVEDAADSFDDPGGQGAKHWTDEEKSKLFKWLMGP # GQDDHWNSLRATKNSCLREVIESPSHILAVANVSQCAHEVFGSKKTYQALKGCYERNFNLFKQIHIFENFLGATGSLELSPDLSETDSLREYERRLAS # ARKAGCDVGNITARTIDQWHRNGWYSLFYSRFSPWNGDPATTRSTNSRLIHGQSNGGSGVPHDDDDNDDHGLDFSHPLTQAVNSVSGLSHDRSSSLAM # SFMNPSEMQHAPPISPHTNVHMSTQPSHTSPILSSSAPSSGSLANNLLGSSNSLSNSSSLLNSSLNPALLQTGSPSFSSTSTLSSTNTASSTLTSSSS # SSGSNPPSSTPSSSSSLVSSSDQAVVNLTITQSMVSSYLQFLQAQTHASKMKLEYMRKREEREERDSQQRRELERLKMERERAEFDHKQSSANTKQKA # DRAIVGYFFLFFSGCHLLTIRPGAPGKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 Scaffold_2 AUGUSTUS gene 565878 566583 0.44 + . g112 Scaffold_2 AUGUSTUS transcript 565878 566583 0.44 + . g112.t1 Scaffold_2 AUGUSTUS start_codon 565878 565880 . + 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_2 AUGUSTUS CDS 565878 566276 0.44 + 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_2 AUGUSTUS CDS 566335 566583 0.62 + 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_2 AUGUSTUS stop_codon 566581 566583 . + 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MQDPDFDDGSTLCKITKEYVFTLVMCMEYGSNVTFFSFRKRYMSSAGPNTARRFLKHCDDYIECVSREAELREQGEVL # DLASFVDLRRENSAIRLCFGLFEYVLGLDLPQEVFDDPTFMEAYWAAADMVCWANDVYSYDMEQRKGLSGNNIVTVLMKDRNIELQAASDYIGLYFKV # LMDRYLDARKRIPSWGPEVDAAVARYMDATAHWVRGNLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 Scaffold_2 AUGUSTUS gene 567343 569836 0.24 - . g113 Scaffold_2 AUGUSTUS transcript 567343 569836 0.24 - . g113.t1 Scaffold_2 AUGUSTUS stop_codon 567343 567345 . - 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_2 AUGUSTUS CDS 567343 567556 0.62 - 1 transcript_id "g113.t1"; gene_id "g113"; Scaffold_2 AUGUSTUS CDS 568793 569084 0.99 - 2 transcript_id "g113.t1"; gene_id "g113"; Scaffold_2 AUGUSTUS CDS 569182 569836 0.38 - 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_2 AUGUSTUS start_codon 569834 569836 . - 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MAVRMDRQQATSQLVATYLHSLGFKVHYPGLPDHPGREIHQRISDGNGAVLSFETGDKELSEKIVGSTRLWGISVSFG # CVNSLISMPCVMSYVFFSTTKYTGFLNTLDAGFFPLDTLQLIQQYCAARGLPEDLIRLCVGIEDSSDLLDDLEHALVDAGAIALSAQQNKYVRVPPGH # AALNKAVEQLAIGSSNSRGVEHEWFVSAPGKVILFGEHAVVHASVDLRCYGLTTPRNDGKLSAHFNDINDFQAEWDIESLPWGASAPLGHHERHPEDL # DQQLIEAIHAGPLRELGPDKDQARNAALAFLYMYIKLTNAESGREWARHLSAYPEHRNTSAKDIHPGQVTPPETPDEANTSDPGDSIKASFETKSLLE # LTGWAQNLGKWLYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 Scaffold_2 AUGUSTUS gene 569976 570425 0.6 - . g114 Scaffold_2 AUGUSTUS transcript 569976 570425 0.6 - . g114.t1 Scaffold_2 AUGUSTUS stop_codon 569976 569978 . - 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_2 AUGUSTUS CDS 569976 570425 0.6 - 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_2 AUGUSTUS start_codon 570423 570425 . - 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MAALDVILRLLRPGDEIIAGDDLYGGTNRLLTFIRTHVGVTVHHVDTTDPNAVIPFIHPTKTAMVLLESPTNPLLKIA # DLALISKEVKERAPNAIVVVDNTMMSPYLQRPLEHGADIVYDSATKYLSGHHDLMAGMITCNRDDLAKVLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 Scaffold_2 AUGUSTUS gene 576453 576686 0.73 + . g115 Scaffold_2 AUGUSTUS transcript 576453 576686 0.73 + . g115.t1 Scaffold_2 AUGUSTUS start_codon 576453 576455 . + 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_2 AUGUSTUS CDS 576453 576686 0.73 + 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_2 AUGUSTUS stop_codon 576684 576686 . + 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MLCGIDMGISRIGGLNLIKLKLKHTDPYRELELCADTTTQHDFPLRPTTDPKFKEYPTTGYNFSQSQGAEHDILITD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 Scaffold_2 AUGUSTUS gene 583083 584303 0.43 + . g116 Scaffold_2 AUGUSTUS transcript 583083 584303 0.43 + . g116.t1 Scaffold_2 AUGUSTUS start_codon 583083 583085 . + 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_2 AUGUSTUS CDS 583083 584303 0.43 + 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_2 AUGUSTUS stop_codon 584301 584303 . + 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MEFALDLRRRTRRTCPIIGGAGNATQACWRGSIGKKARSLQIARLATAAGDTAGNGRRRSSPGVDRKARKINIATGAG # PFLSPSSGISPNFPSIFPDHSSHKRKRTSVAAPSPLTTGSAFPFPPSTGQPSSADDFIDIDESWSHSYIDISHDIIPESEARERLRKQASEWRGISAI # SPVHDLSSKPGWPYFNTTPVRYPHPVSPSVSSVSLRPINSSPGSVLPPSYAVHTTHPIPSQSLLAPYPSVITSSSTYLQDPLNAYATLGMPKPRVHLI # GPPLDVSLDARGKGGKARFVRSGCQPNAVLRPVLCDGKRESGSASDPDNIYRRTSSGEQADSSSHSAHPPPQDTPDSLSFAIFALRDLKVDEEIVLGW # EWDDANVVHLLPALLQDKDFPVSLVRPIVLVRIH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # start gene g117 Scaffold_2 AUGUSTUS gene 584469 585710 0.48 + . g117 Scaffold_2 AUGUSTUS transcript 584469 585710 0.48 + . g117.t1 Scaffold_2 AUGUSTUS start_codon 584469 584471 . + 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_2 AUGUSTUS CDS 584469 585710 0.48 + 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_2 AUGUSTUS stop_codon 585708 585710 . + 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MKEFVDEVDDWDPEHELQRERELRNVNSGIEPSEEFKHFRGMQDGQGSVNIEMIKPFSTSETFSDHLSPSHPTKSHHQ # PPSTTGSTAAPSMTVPFDSSLSSTIPGNLQIRPQTSDFFNSSPMYARPLSPSLIQKEQLEQEVELQTQSFAHPTFRRLNKHSTASSSQIPSTSSTVDL # GPLIGVPRGFRTREKVEGSGGLGGVEMDTDDSENRGDSVGVDVHTKAYVRLGPQDEKQRNFPALHPNLDADSSIFSMYADQATQPPAHNFPLHPYPYP # IHGITPSPPSVYSYAPFYGTPYPFPHTTYPLYIPHPPGNPLHNPIRNGGKEDLFWGDIPSIARVDKGKGRAQDIDIVAADDEDNDEISMGRNNKEGID # VVVNEGKFENSCISVHLLSGFYRFFCSFVLCSFVSQAYPSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g117 ### # start gene g118 Scaffold_2 AUGUSTUS gene 585830 589433 0.43 + . g118 Scaffold_2 AUGUSTUS transcript 585830 589433 0.43 + . g118.t1 Scaffold_2 AUGUSTUS start_codon 585830 585832 . + 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_2 AUGUSTUS CDS 585830 588011 0.43 + 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_2 AUGUSTUS CDS 588121 589433 0.81 + 2 transcript_id "g118.t1"; gene_id "g118"; Scaffold_2 AUGUSTUS stop_codon 589431 589433 . + 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MKRRWQHERNESKSPSEGKRTRRAYEVMQVDDDGRTRGGQGALDHLLPSIALYTQRSTFTDPTTGDLSTTTSPAMPTI # STTHAPVVCSPSTTSPLLTFANLSLLSPVPVSSSFTSSLYPFPDRQLPSHKSTNWWDVSSQGSRHQPKSPMPRAQFRSQSPPRHISPTRRAITDPLAA # LAAAAAAARPISPLPNRIYSDSRSKSRSRSPRSDYRLGTHSTLNEPVHDRYSYDMTTPYLGSPRRSRRMSTSDGERSDPDHHHPSHFRGLEDFDHDNQ # DVRQSRATSMLESHDAVLGPGGIRVLSSPEHEWLPLRKGDTSTSTESSYGATNVLSATDFIDHSRLERSVIAIEDESSVDSRSLKVKAELLNEDHIPS # STHLVHQNCEPVEVVDVERPCFVGTSAEPETALQITQPSHLVPTLHPPLASPNELPRSDLLSPTDSYVAPLSPLTPPATNLKDIPPWPASPSPRNSPS # VSDPVQKSSLPPTSLVPDAIPSSELQPAQYNEARPSTLVSADSHAPTDSPMSALSSVGSSSPINANFTLHAIENKENDCDNECTAQVTRSSPFSSPLS # SPMEKLISLPAYSAPIEQSSSSSGPVHERTEVNCPPPNTIHHIPSELPAASVGSFQSQPDPPLHASIHDVPALEHSSSMSPLHSPGNDSPTTPKEVDS # EEVETMDVDVMNAHDTDTNDEQERKAQLTSKLSQMLSHNLLKANTEYSTVYQRQSFSSLSLSSELAPQTSPALATSPTPTIFAASKVKKMSLKDFAIR # KRRQKEEEEREKKEKEQDKGNDVEQKPVDWEDAIIIEDRQKVQESHVEVEAPVDSNGEDDAEKTPETDSLSAPPAKYVVPAVLESNIEERGHNVAKSD # VDVIMKASETLNKLINSSSMSIKPMTVAHEYSASPPHFDVSTTAKLPPMVSSLSASPNIASRPPRGLITDPIIIADSSLSSLTREKTMPPHSVPEDGE # IEDGDSRTMFRFSPSPKHPSSNIKSSYLLSTSQPKSYSPPPRAFKIHENIVTNEQRSRTPPTQPRSFTARSPSVSSVPHGSPPIRRLAIAPVANGLSP # KVAANVTSTTSSAPFIPSAPPSANPALGRTPPSGPRALRQLQQHQHSGGGVGHMGPRNSNAYIPRGLPYDRDRFRDRGGDFGRERDRDLHWNAPGVQR # LRTSENRY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g118 ### # start gene g119 Scaffold_2 AUGUSTUS gene 601997 603079 0.97 - . g119 Scaffold_2 AUGUSTUS transcript 601997 603079 0.97 - . g119.t1 Scaffold_2 AUGUSTUS stop_codon 601997 601999 . - 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_2 AUGUSTUS CDS 601997 603079 0.97 - 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_2 AUGUSTUS start_codon 603077 603079 . - 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MDTTPQTELPHARTYAEIWSTSKTSPIEQNMTTGPKVKLKAQEPQHRHYNHNHKPAGLERFRNFVKLTSHSRGSEAGQ # PSSDRSSNNVQVLVGLSGEDSDFVKNCPAIDTNGYTDDTENPNVLAERIRQLIISLPAIVVTPDNESSADTIHIMSKFNLHLTHDLDAASCPPPPPPS # AILINDKHLINVLSNPLIMNGGKEEKQPTVWSVLLSLAPPNYHERDEMGNMGNASISCNPPDTSVMLYLPLQPKTQDEVELAESQHIQVVVLPTLAFL # ADDNGSANAEHVVTAGWKWWPFHSKKKDQIPGIPKISSRTPSTSTPGVPKSTKSSLPPTLPKIVKKIWLPSRTKFSIEATWWGYRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 Scaffold_2 AUGUSTUS gene 610557 610985 0.3 + . g120 Scaffold_2 AUGUSTUS transcript 610557 610985 0.3 + . g120.t1 Scaffold_2 AUGUSTUS start_codon 610557 610559 . + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_2 AUGUSTUS CDS 610557 610985 0.3 + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_2 AUGUSTUS stop_codon 610983 610985 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPP # INNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTEEQQQWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 Scaffold_2 AUGUSTUS gene 611069 611485 0.5 + . g121 Scaffold_2 AUGUSTUS transcript 611069 611485 0.5 + . g121.t1 Scaffold_2 AUGUSTUS start_codon 611069 611071 . + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_2 AUGUSTUS CDS 611069 611485 0.5 + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_2 AUGUSTUS stop_codon 611483 611485 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMP # EGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDVKSWTSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g121 ### # start gene g122 Scaffold_2 AUGUSTUS gene 611626 613049 0.18 + . g122 Scaffold_2 AUGUSTUS transcript 611626 613049 0.18 + . g122.t1 Scaffold_2 AUGUSTUS start_codon 611626 611628 . + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_2 AUGUSTUS CDS 611626 612370 0.55 + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_2 AUGUSTUS CDS 612421 613049 0.26 + 2 transcript_id "g122.t1"; gene_id "g122"; Scaffold_2 AUGUSTUS stop_codon 613047 613049 . + 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MKEQDRSMRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLK # KPSVTIEDVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVD # LSTEELAALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQRILQKDIVESFLRDLSIDDERRNIAIVA # NQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYL # QLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g122 ### # start gene g123 Scaffold_2 AUGUSTUS gene 613408 614743 0.28 + . g123 Scaffold_2 AUGUSTUS transcript 613408 614743 0.28 + . g123.t1 Scaffold_2 AUGUSTUS start_codon 613408 613410 . + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_2 AUGUSTUS CDS 613408 613430 0.28 + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_2 AUGUSTUS CDS 613486 614743 0.98 + 1 transcript_id "g123.t1"; gene_id "g123"; Scaffold_2 AUGUSTUS stop_codon 614741 614743 . + 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MEGSSLNPLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRY # ESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKATLPDEFR # IERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGTFKNEFFPPVKVPVIPHEPWVERNI # PIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQL # SRDMTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g123 ### # start gene g124 Scaffold_2 AUGUSTUS gene 614959 617368 0.42 + . g124 Scaffold_2 AUGUSTUS transcript 614959 617368 0.42 + . g124.t1 Scaffold_2 AUGUSTUS start_codon 614959 614961 . + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_2 AUGUSTUS CDS 614959 616906 0.42 + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_2 AUGUSTUS CDS 616980 617368 0.5 + 2 transcript_id "g124.t1"; gene_id "g124"; Scaffold_2 AUGUSTUS stop_codon 617366 617368 . + 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLGEMSKDERIKFIRLIK # FQVDDQGRLYHRNTDQPDQPQLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRSCKECQNRQMRLLKAPPTLMHTPSLFQK # VHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIE # RAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYQLRRFERKYRHTIKDWD # FKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYW # MTPENDYIFDAIPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g124 ### # start gene g125 Scaffold_2 AUGUSTUS gene 617682 619136 0.31 - . g125 Scaffold_2 AUGUSTUS transcript 617682 619136 0.31 - . g125.t1 Scaffold_2 AUGUSTUS stop_codon 617682 617684 . - 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_2 AUGUSTUS CDS 617682 618109 1 - 2 transcript_id "g125.t1"; gene_id "g125"; Scaffold_2 AUGUSTUS CDS 618191 618326 0.81 - 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_2 AUGUSTUS CDS 618969 619136 0.46 - 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_2 AUGUSTUS start_codon 619134 619136 . - 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNSPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKS # RQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g125 ### # start gene g126 Scaffold_2 AUGUSTUS gene 628944 629528 0.85 - . g126 Scaffold_2 AUGUSTUS transcript 628944 629528 0.85 - . g126.t1 Scaffold_2 AUGUSTUS stop_codon 628944 628946 . - 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_2 AUGUSTUS CDS 628944 629528 0.85 - 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_2 AUGUSTUS start_codon 629526 629528 . - 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MLRAPARDEDKRTGLTETQVAEAVAYRENMLRERRQTEVADGKKPNAGCYGSVPNNTDENAVEDTDETADERTPFLVK # TKDRSLSQTRSALNALPINPLAPSSAFDETFRNQLQDEANDGAIRDADGEEDELTSSAENRLLSRDWRAPVGKHISIPVRIEPKVYFAAERTFLVRFH # NFPVLRQISSFREHNRNG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g126 ### # start gene g127 Scaffold_2 AUGUSTUS gene 638051 639436 0.93 - . g127 Scaffold_2 AUGUSTUS transcript 638051 639436 0.93 - . g127.t1 Scaffold_2 AUGUSTUS stop_codon 638051 638053 . - 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_2 AUGUSTUS CDS 638051 639436 0.93 - 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_2 AUGUSTUS start_codon 639434 639436 . - 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MIQHPPYAISQHHFMIVPPPLQPPQSQLRPNVPPTIVSRFGSSYTAVFLDDPTDQNYPSQQTHPTRPLTADGDLDELA # NHYMNTVAALQYQLADKYFLPQIFKNVIEKEGVARNAARILALVHVQRSQAPMAQALEDVQTRKRYDELLQMFSFAKEQFDDDDALAALNIISTFLFD # GGNGDWERWLHVASVYSNSILNDRSRFLDYRDALMNSTDKERFIIKTTFWFDVLASVTTMKKPNFVEVIHELYNPSNQSGLSEISDDSDSLSMLSVMG # CENRIVWALAKISELHVWKEHRAKSGSLSIVELSRRAEDIEMHLAPSVTPLRPRTQDDVPRLLASEVFRTSAIVYLRTIVSGDHPLVREISEAVDDAV # VSLERVAAESKVNVKHVVVRSTVFAFFVCAALTTKPTKRAFLLKQLKDEGEVGNCRGILDLLQNLHVGSQKPKEVPWRSILRESRMLLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g127 ### # start gene g128 Scaffold_2 AUGUSTUS gene 641539 643186 0.59 - . g128 Scaffold_2 AUGUSTUS transcript 641539 643186 0.59 - . g128.t1 Scaffold_2 AUGUSTUS stop_codon 641539 641541 . - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_2 AUGUSTUS CDS 641539 641997 0.99 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_2 AUGUSTUS CDS 642060 642674 0.87 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_2 AUGUSTUS CDS 642727 643047 0.68 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_2 AUGUSTUS CDS 643106 643186 0.89 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_2 AUGUSTUS start_codon 643184 643186 . - 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MSPSAAPPSPQEVHRKLSISSVARNSKPPPPVTVPTVSGNESDSDSIPTPDWNISPSGMISGASGTILPGSLQQQPLS # SIAERRSGSGEDSEDDDDEGEGGWKTAQVGEGHAQGSIDESVIKTGYLWKKGERRKTWKKRWFVLRPAHLAYYKTAAEYQLLRLLELSDVHSCTQVSL # KKHENAFGLISPVRTFYLQAKTSAEVQEWVTAIEEARQALHASSTQTSTSAPIPIPRASNHPSTPLPITPSPPSFVSHNATSSDSEDASPSAQSAQRT # YSTSSQTRPVIGFSPSKSQPSASPKDPSKVVLTGYLMKCGSKRRNWRKRWFVMSGEKLIYSASHMDTKPHRQFPFSDILDALEYDVVSNRPHYPPSVS # SPPNFEGGGSEGPSTAHTFKIITTKRTLLLCAPTEEDEIKWLGAVRALIARRSLSGDTAKAPPSGGASNPDTSPHSSGFTTSGGIKGKVRRLSASGGS # GTNREEVSSTGNRKGASQTYP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g128 ### # start gene g129 Scaffold_2 AUGUSTUS gene 647491 650223 0.95 - . g129 Scaffold_2 AUGUSTUS transcript 647491 650223 0.95 - . g129.t1 Scaffold_2 AUGUSTUS stop_codon 647491 647493 . - 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_2 AUGUSTUS CDS 647491 649132 0.95 - 1 transcript_id "g129.t1"; gene_id "g129"; Scaffold_2 AUGUSTUS CDS 649286 650223 0.95 - 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_2 AUGUSTUS start_codon 650221 650223 . - 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MFYRWGQATAIINDALFVQGGRTDQYNAYSYTTAPIDDDLLYLSLSTSFNPSSPPWQLISSSSNSSTSSGPAVAWHTI # SATNTSEIFLFGGVPAINSPTVLTVQADSAWLLNVYNRLVPSWIQEAMSWANEPIRRIRHSAVTSIEGVVFIVGGEKADGSGIAFSDHYAFDPAVPSF # TQLPTSGPPGITGHASIILPNGTMFVFGGYEPSSSSMVDFSTIWALDTTASFFEWTVVTAEGTIPGSRRAFAAVLIDGGKILIQGGSDATFQTTYSDG # WALDLTSDPPTWSEVSALSQVGQRRDHFAVSYGSDVIFGAPSPTSVSITQTIPGATQITTGTGSQSTGTDNQSGTGVTGTGQPTSTGDPNKPGNGDPG # TNDSDSNNGKTEGVVLGTALGILAFLVAGVIVVYYVRRRRNNAAEENHFSLLNENDPEAGLPAVRSSGEKGPYSERWNVLKNLKVGGALTAVPGGVVG # LSETHPTAARRDMLADEDTRDFGPWYGRRKRDHTGDSSWSLMSFMKLRGREGSSSSYASLATPFREKSDPFSDGAALMGDDETGFVGAAARGYSGSIG # RPSHNRGISYTSTLSAVSDLEQDIAPYSGGTTYHDPFSNPFSDDNAIAELPAVSTSSRRAFPRPNQPLQIQTMLPLEVHSLSPVTEASRATHSQSDHT # SSVSEHEHEHSVSPFNSISQVTSRTSFSPRPSSLLDANNPNPDSYSVRRSNSWWSRFSRTSLLDRGPSGSKQLGGMPDIRDPNPPPRLGGLVAIEESQ # HSGSPEHDSPNSNRSNSAGSIKRALSRGSGSKVYKGKHGKSLSSLRTADTEAIERMAGEVDVVQRERTGSHGTHDSTGSYDSNSTGWLPEDGRTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g129 ### # start gene g130 Scaffold_2 AUGUSTUS gene 650725 651447 0.36 - . g130 Scaffold_2 AUGUSTUS transcript 650725 651447 0.36 - . g130.t1 Scaffold_2 AUGUSTUS stop_codon 650725 650727 . - 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_2 AUGUSTUS CDS 650725 650760 0.96 - 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_2 AUGUSTUS CDS 650817 651121 0.99 - 2 transcript_id "g130.t1"; gene_id "g130"; Scaffold_2 AUGUSTUS CDS 651177 651447 0.38 - 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_2 AUGUSTUS start_codon 651445 651447 . - 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MSEMMIKNNLVQIKELPPYPLALEDKVLMNSMARARPDAKSGSFAYTTKMEAPIHVDTANFKTVSEVLAADALKKSAS # CSEEFVGVGVDQELISSVPSHNPNFVSRNFTDAEIAYCSAQPSPASSFAARWVGKEAVFKSLGVKSKGAAAPMKDIEIVNDKDGVPTVVLHGEAKTKA # SEKGVSKVLLSLSHSENVAIAFAQAST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g130 ### # start gene g131 Scaffold_2 AUGUSTUS gene 652984 654283 0.48 - . g131 Scaffold_2 AUGUSTUS transcript 652984 654283 0.48 - . g131.t1 Scaffold_2 AUGUSTUS stop_codon 652984 652986 . - 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_2 AUGUSTUS CDS 652984 653572 0.56 - 1 transcript_id "g131.t1"; gene_id "g131"; Scaffold_2 AUGUSTUS CDS 653706 654283 0.6 - 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_2 AUGUSTUS start_codon 654281 654283 . - 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MGPTNIVAHELESFGVRTFSAKEMAFNILGLMHPLLFSITQVEPIWADLNGGMDRLPDLADITTRIRTSLTKKSDMRR # AIARDNAADFKILNGVDAERLIQTVDVLPRANFRFDFPALESQDSLVDVTKLRGMLDLDKVMVITGSAEVGPWGSARTRWEMEARGEFTIEGAIEMAW # MMGYIKHFDGRLKDGTFLLLMTVTEPELFRGYDPNKKIFNQEVELIHDLEPIEVTADEASKFKLQHGDKCDIWAGEGGQWFFKLKKGACVFVPKSFSF # SRKVASQIPTGWYAGRYGLPEDIIAQTDQVTLWNLVSTAEALNMSGITDPYELYQHVHPSEVGTSLGSGMGGQVSLAKMFTDRRDEKEVQNDILQETW # VIFLHFLHRCLNFVKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g131 ### # start gene g132 Scaffold_2 AUGUSTUS gene 654353 656763 0.74 - . g132 Scaffold_2 AUGUSTUS transcript 654353 656763 0.74 - . g132.t1 Scaffold_2 AUGUSTUS stop_codon 654353 654355 . - 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_2 AUGUSTUS CDS 654353 656444 0.82 - 1 transcript_id "g132.t1"; gene_id "g132"; Scaffold_2 AUGUSTUS CDS 656498 656763 0.74 - 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_2 AUGUSTUS start_codon 656761 656763 . - 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MATRTLKAKYELQDDCVSLKREILCHAKHSKEIYYLFEDEAVGESVPVEVTESVAAPVTATVTAATAVPLPVAVPTGP # AVSIEDVPVKSDISTSKSIKDLVGGKSTLQNEILGDLQQEFSSAPEKGEELPLDELGPALGSGHSGTLGKYTTGLVSRLVGGKLPGGFNSSAVKAHLS # KTWGLGPQRADGVLLLGTTMEPAKRLGSEAEAKTWLDGVVSAYAQRSGISLASPGAGGGGGGGGSGGAVINSEEFTKFQAEQERFAAQHIELYMRYLK # RDSRSGEIAFDAEKANSMALQAKLDSIAKEHGDLYIDGIMPVFDPLKARRFDSSWNWVRQDALTMYYDIIFGRLTTVDREITARCIHLLNRADPEMLA # YMQYNIDQCDPSKGDTYKLAKEFGQQLIDNTHQFIGQPPVYKDGMSSMLFFHSLSDVLLVTFPTAPHTEVSSKGDIVYTEVMRENVRKLEAYVEEMAR # SDTVSGPVNIQKVQDDVLKLWTIVKSQPEISQEQKNRIKALYEGVVRSLRNKGSEPRPRTPRNRRSSSQFLRPQISGIATVSADKVPLLHLKRKVGTN # WEYSSNLTSVYLDILHEIATAGTTFKDKNALLTGVGKGSIGVEVVKGLLSGGAHVVITTSRYSRSTVEYYQSIFQTFGSRGSALTVVPFNQGSKQDVE # ALVDYIYSTLGMDLDFILPFAGIPENGREIDGIDDKSELAHRIMLTNLLRILGAVKNKKASRHFVTRPTQVILPLSPNHGLFGNDGLYSESKISLETL # FQRWASESWGEYLCLAGAVIG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g132 ### # start gene g133 Scaffold_2 AUGUSTUS gene 657468 658343 0.74 - . g133 Scaffold_2 AUGUSTUS transcript 657468 658343 0.74 - . g133.t1 Scaffold_2 AUGUSTUS stop_codon 657468 657470 . - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_2 AUGUSTUS CDS 657468 658343 0.74 - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_2 AUGUSTUS start_codon 658341 658343 . - 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MRDGNIVVKIETVNVLGEKVLEGSAEVSQPTTAYVFTGQGSQEPGMGMDLYNSSPAARAVWDGADEHLRAVYGFSILE # IVKENPKEKTVHFGGIKGQAIRQRYMDMSYDTTDKDGHIKTLPLFADIDIRTPKYTFSHPNGLLFATQFAQIALVVTEKAAFEDMRSKGFVQTDCAFA # GHSLGEYSALASIADVLAISALVDVVFYRGITMQRAVERDSENRSNYAMCAVNPSRISKSFSDAALREVVDTISVGTGSLLEIVNYNVEVGFSFSLQL # FVSDDFHRDNNMCALES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g133 ### # start gene g134 Scaffold_2 AUGUSTUS gene 658462 659226 0.66 - . g134 Scaffold_2 AUGUSTUS transcript 658462 659226 0.66 - . g134.t1 Scaffold_2 AUGUSTUS stop_codon 658462 658464 . - 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_2 AUGUSTUS CDS 658462 659226 0.66 - 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_2 AUGUSTUS start_codon 659224 659226 . - 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MKGARPFQAGDICRSEAKIVSVVNSGPGKVVKVKGHVYRDAKPVVEVVSAFLYRGVFTDYENTFETTEEPDYIVTLAT # DADVSVLQSKEWFDWEDDTRPLSPGIPLIFRVQSEVSFMDRTSYRELSVSGEIFVRDQLKNLQKVGSVEFQADDAHGNPVVAYLQRHGIAQGLSVPLA # NEGYQLTTTEGSTSFFSPLTNEPYSGISGDFNPIHINPYFSCYAGLPGTITHGLWSSAATRKYVENVVAKGHPDRVLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g134 ### # start gene g135 Scaffold_2 AUGUSTUS gene 659308 662744 0.28 - . g135 Scaffold_2 AUGUSTUS transcript 659308 662744 0.28 - . g135.t1 Scaffold_2 AUGUSTUS stop_codon 659308 659310 . - 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 659308 660279 1 - 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 660665 660875 0.49 - 1 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 660958 661367 0.36 - 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 661460 661613 0.55 - 1 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 661651 661674 0.96 - 1 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 661770 662073 0.99 - 2 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS CDS 662150 662744 1 - 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_2 AUGUSTUS start_codon 662742 662744 . - 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MTGATGHSQGIVSAVAAAASSSFESFTENAKKAIRWLFFCGFRGQEAFPIVSLEPGLIQDSIDGGEGMPTPMLSITGL # SLKELEPHLVQTNNHLADNSQLQVTLHNGPRALVVTGPSRALHGLVVNLRKIRAPSGADQSKIAFSQRKPVFSVRFLVVGVPFHSVYLGEATDKLLSE # DLKGEELWEPEELRIPVFNTEDGKDLRASKTSITRSLCNQIFTSPIHWTEATNFPKSATHALDFGPGGLSGIGPLTARNFDGRGVRVIVIGERGKGDA # ELYDSTAVQREDNWGEKYAPRLVKSGQASNHGPCAILDAGYHVELAGGGHYNANALRAKVVEIQGKIPQGAGITLNRSTSILLSLAAEIIDGLRSSGI # KHLGLKPGSVDGIRQVVNIAAANPDFPIIMQWTGGRAGGHHSYEDFHQPMLSTYRSIRKHENIILVGSGFGAAEDVWPYLTGEWSVAYGVQPMPYDGF # LFGSRVMVAKEAHTSSSVKDLIVALDRVRRAVKLWKEFDDTVSNYPKKSVRLGYLSIVMRSSKSSTSISASHGSAGRRMAVLRNYETTYEETVLRMDS # LWAAEDVEAVFDQDPERVCILQGPVAVKHSVIKDEPIRDLLGNINSSLIQKVLQLRYNGDASTIPSIGYLAPPRRASRVPAGVKITTTDEQIVYQFGK # SLPTNASWLACLAGSQLNWFGALIGSTSVVQGSSYISNPIRRLFYPRPHEKVVVSLSNGQPTSIVAYGGARSYGLHDPNFKATEIIFNSSTNLIDVTI # FEERNKVAVPLTLQFEYKSAMGSAPIHEVVTGRNMRIKAFYWKLWYGDDQSLPELDIHDTFTGPDVTLKAEDIEKFCSVVGNNDESFKSVRTTTISAP # MDFAIVAGWQVRSSISKLLNYAFIPNL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g135 ### # start gene g136 Scaffold_2 AUGUSTUS gene 663147 663545 0.57 - . g136 Scaffold_2 AUGUSTUS transcript 663147 663545 0.57 - . g136.t1 Scaffold_2 AUGUSTUS stop_codon 663147 663149 . - 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_2 AUGUSTUS CDS 663147 663545 0.57 - 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_2 AUGUSTUS start_codon 663543 663545 . - 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MVLGMPAKNYLIFKVSIPVSTKADEWISAEILREEFTHEQSLIDAVGNTAELENQAEASLELAARFLGFIATRVHENS # ECTAARTALLLNVFKFFTSTYLYSKDIHSLASNYDTEVRKAVLTSYFSAFLCSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g136 ### # start gene g137 Scaffold_2 AUGUSTUS gene 666364 666864 0.66 - . g137 Scaffold_2 AUGUSTUS transcript 666364 666864 0.66 - . g137.t1 Scaffold_2 AUGUSTUS stop_codon 666364 666366 . - 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_2 AUGUSTUS CDS 666364 666864 0.66 - 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_2 AUGUSTUS start_codon 666862 666864 . - 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MSLNIKSTFPVIPEMPLTPQPLTLRRTRSIDTLESPRPTKPTLDYDLRPPMAPFTLSDQSSRSASSTGSPRKSSHSRG # ISLGTGIISRSQVNLLGNNSNLDLTATAKSGKEKGPGSSRIISPTKSVSILAGASSTELDVEQVKKLRLLYETNLLGNNLYNVPSFTF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g137 ### # start gene g138 Scaffold_2 AUGUSTUS gene 666974 667362 0.39 - . g138 Scaffold_2 AUGUSTUS transcript 666974 667362 0.39 - . g138.t1 Scaffold_2 AUGUSTUS stop_codon 666974 666976 . - 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_2 AUGUSTUS CDS 666974 667258 0.42 - 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_2 AUGUSTUS CDS 667354 667362 0.58 - 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_2 AUGUSTUS start_codon 667360 667362 . - 0 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [MYLDVQEILPSKRITSSDFTMVTPLADGAPNGKENQPSSNFFTQSTRNTKGGSAGSDKGFTDKKKRGAAQEINQLEHG # DDMHEAFDQLLVRWFTYIM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g138 ### # start gene g139 Scaffold_2 AUGUSTUS gene 669160 669846 0.74 + . g139 Scaffold_2 AUGUSTUS transcript 669160 669846 0.74 + . g139.t1 Scaffold_2 AUGUSTUS start_codon 669160 669162 . + 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_2 AUGUSTUS CDS 669160 669846 0.74 + 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_2 AUGUSTUS stop_codon 669844 669846 . + 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MIKTLLSTPTIRADNNNDDLDDDSGGLPRGEPGDPSGPGVRRSRRTWWSGGPGGPGGPGGPRSPISPDIPNEQRAMLE # LLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLP # AWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNPVQHPGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g139 ### # start gene g140 Scaffold_2 AUGUSTUS gene 674760 675694 0.24 - . g140 Scaffold_2 AUGUSTUS transcript 674760 675694 0.24 - . g140.t1 Scaffold_2 AUGUSTUS stop_codon 674760 674762 . - 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_2 AUGUSTUS CDS 674760 675218 0.82 - 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_2 AUGUSTUS CDS 675317 675694 0.25 - 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_2 AUGUSTUS start_codon 675692 675694 . - 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [MSHSRTQTITTPSSTTAGPSRSRPLNPPPADPVNDDDEALEEDDDEAIRQAEETVRRMKARKAAAAARRKAEEEAAKK # AAEEAQRKKEAAARELEERRRLMAEAAAARSRRGSSPGGSSISPRRPVPVGGDPDDGDDGDDDDDDEDDRTPCERCRSKRIPCLQQAGKRSSTTCKPC # HDAKVRCSHSNRPPTVKKEVASHPTGERLAVLESQVAQLLADNRVLREGQIKSNTYDRHIIKKLEWLMRDAARRRDSPPEMPEPGPSRLPKKRRRVGR # KRIE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g140 ### # start gene g141 Scaffold_2 AUGUSTUS gene 680559 680921 0.33 + . g141 Scaffold_2 AUGUSTUS transcript 680559 680921 0.33 + . g141.t1 Scaffold_2 AUGUSTUS start_codon 680559 680561 . + 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_2 AUGUSTUS CDS 680559 680921 0.33 + 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_2 AUGUSTUS stop_codon 680919 680921 . + 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [MYWAWSLMTPIAEMFTKPKKKKKGKVVVIESTSESEDDEDSDSSESEESEEEKPKRKKTVKQVVRMKIVEKLQTDSVE # DLAKQLRALNVQDVNYAGVYARLATISPVVAGAIAALHQFRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g141 ### # start gene g142 Scaffold_2 AUGUSTUS gene 681313 681954 0.98 + . g142 Scaffold_2 AUGUSTUS transcript 681313 681954 0.98 + . g142.t1 Scaffold_2 AUGUSTUS start_codon 681313 681315 . + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_2 AUGUSTUS CDS 681313 681954 0.98 + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_2 AUGUSTUS stop_codon 681952 681954 . + 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [MVEANEDTSASSSRVEGRMEEIIDVDAIEEDGDTWMEPMELERVEENVGMAVTRSAGKRKQHKEDTEDQPKAKETHKQ # PKIPVNLPGPLTISGSKPAFTYESKAEDPNAATKMFQRMLDVVVPDVTVHDLVSLSSDLQKQWIDHTKVQHIPTTTDEPTVQATIRTKESLNLEYSTP # VRMIEVMLFGRQKETALINDGAEIVIIRADVCKEMGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g142 ### # start gene g143 Scaffold_2 AUGUSTUS gene 684214 685725 0.59 + . g143 Scaffold_2 AUGUSTUS transcript 684214 685725 0.59 + . g143.t1 Scaffold_2 AUGUSTUS start_codon 684214 684216 . + 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_2 AUGUSTUS CDS 684214 685725 0.59 + 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_2 AUGUSTUS stop_codon 685723 685725 . + 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MEERLKGLGILKNRFLWPEECLLMADVLKKNEMGIAWDETEKGRFCEDYFPPLKIPMIAHTPWADRTLPIPPGIRNKV # IQLVREKVASGLYEPSNSSYRSQWFVVAKSDGGLRIVHNLKKLNAITICDSGQPPIIHLFIEQCGGRGIYSGIDVIAGFDHGTLHEDSRDPTTFDTPI # GTFRLARIPQGWTGSVPVFHGHVAFLLQDETEVSPNFIDNLPVLGPKTRYEKQGGDYEVLVENSGIRRFVWEHALDLNRILHQLKHAGVTVSAKKLKV # AVPELKIVGTVCTYEGRLPDNSKVVKIQSWPACESITEVRGFLGTAGVLRVWIKDFARITRPLVDLTKKDVTFIWLPEHQQAMANTKDAVSKCEALVT # IDYLSLLPVIMAVDSSYIACGIILSQDNKDGRRHPSRFGPSLGTNASSLLPGQIELYGLFRAFHAMKIYIIGVQKLIVEMDASCVKGMINNPDMHLNA # AMNRWIAAIQLFDFDLKHVPGKNFLGPDGVSRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g143 ### # start gene g144 Scaffold_2 AUGUSTUS gene 686560 687726 0.9 + . g144 Scaffold_2 AUGUSTUS transcript 686560 687726 0.9 + . g144.t1 Scaffold_2 AUGUSTUS start_codon 686560 686562 . + 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_2 AUGUSTUS CDS 686560 687726 0.9 + 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_2 AUGUSTUS stop_codon 687724 687726 . + 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g144 ### # start gene g145 Scaffold_2 AUGUSTUS gene 687777 689429 0.95 + . g145 Scaffold_2 AUGUSTUS transcript 687777 689429 0.95 + . g145.t1 Scaffold_2 AUGUSTUS start_codon 687777 687779 . + 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_2 AUGUSTUS CDS 687777 689429 0.95 + 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_2 AUGUSTUS stop_codon 689427 689429 . + 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNFGNYEGSWDLQTSTDALSGILPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g145 ### # start gene g146 Scaffold_2 AUGUSTUS gene 706859 707730 0.25 - . g146 Scaffold_2 AUGUSTUS transcript 706859 707730 0.25 - . g146.t1 Scaffold_2 AUGUSTUS stop_codon 706859 706861 . - 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_2 AUGUSTUS CDS 706859 707259 0.47 - 2 transcript_id "g146.t1"; gene_id "g146"; Scaffold_2 AUGUSTUS CDS 707317 707582 0.56 - 1 transcript_id "g146.t1"; gene_id "g146"; Scaffold_2 AUGUSTUS CDS 707699 707730 0.51 - 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_2 AUGUSTUS start_codon 707728 707730 . - 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MNKSRTPLPRFDWEDSSEEEEAKPTPAVTAAPPKKKGTLKAKLAEKEAMKALRNDEDDSDAYDSDAVLDPREKARRLK # EKELNSDLNNAADLFGAAALGGTTSKELDSLLSFQPRTKEDFVKLSTMIIELVMKRHQNKPLYPAFVEHHVRELAGPLKDVEVRKAASGLTTLANEKQ # KEARDKASGKKKKAASKPTLGSAKVANKYVNPDLSGCLGVLLMFLSGLILAFMMRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g146 ### # start gene g147 Scaffold_2 AUGUSTUS gene 708911 709531 0.88 + . g147 Scaffold_2 AUGUSTUS transcript 708911 709531 0.88 + . g147.t1 Scaffold_2 AUGUSTUS start_codon 708911 708913 . + 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_2 AUGUSTUS CDS 708911 709531 0.88 + 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_2 AUGUSTUS stop_codon 709529 709531 . + 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MTEGIGFQSNFSCSHSVVLPHPISEVFTTIGTTQGHERVCRLSKLCTNFELLNSDTVSLPTKAALSDSHVRTLPTSDS # RTAEAQNASEDTRTLPRQAFTMTETIPLVFGLFKNDVILNGTLTWDESAKLALYETESNNGVQVWKLRTFEEVDANSTRVSERIEGVCPRWLRAIVQR # EASKGHMCVEFSALCSCNAQDIVTVQCAYE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g147 ### # start gene g148 Scaffold_2 AUGUSTUS gene 709734 711017 0.26 - . g148 Scaffold_2 AUGUSTUS transcript 709734 711017 0.26 - . g148.t1 Scaffold_2 AUGUSTUS stop_codon 709734 709736 . - 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_2 AUGUSTUS CDS 709734 710484 0.62 - 1 transcript_id "g148.t1"; gene_id "g148"; Scaffold_2 AUGUSTUS CDS 710550 710764 0.31 - 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_2 AUGUSTUS CDS 710937 711017 0.9 - 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_2 AUGUSTUS start_codon 711015 711017 . - 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MGTDYYKLLGVDKDADDNAIKKAYKKMISEAFEVLSDKQKRTIYDQFGEEGLKGGGGPPPGAGTGAGPSGFSGFSGFP # GGSTFSFSSSGPSGFSSSGGSLLTLNFLRQIFGVGLNSAFGMGGMGGRPGMRMSDADDDMDGSYPSFGGGIPRSRPSRPARSNSYSKQSAAPSEITRP # FKVSLQDLYNGAVKHLKVGRRLLNGSTEDKVLDIQVHPGWKSGTKIRFARAGNEQASGEAQDLVFVVEEKPHDTFKREGNDLICNISIPLLEALTHEG # GKKQVESLDGRKIQVDLPAGVIKPGQETTVHGEGMPIRKDGTVKKKGDLIVKWNVVFPDRLTSSQKAGLKKVLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g148 ### # start gene g149 Scaffold_2 AUGUSTUS gene 715099 715734 0.73 + . g149 Scaffold_2 AUGUSTUS transcript 715099 715734 0.73 + . g149.t1 Scaffold_2 AUGUSTUS start_codon 715099 715101 . + 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_2 AUGUSTUS CDS 715099 715734 0.73 + 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_2 AUGUSTUS stop_codon 715732 715734 . + 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MTGITAFLTRAGAASWRTVIYFNVVRSIKHILNTLESWDDYIDDDMALDSPTSKYMGGSRSGTSSPVIMNPPLENSNA # HSRSASPFQGNAATSRSTIASLRRRLSPLVTTDTALADRLSGGITVSGSGKGGVFVRSGWQARTIENALGRKRGRVSDELSPKKPDEIQDVLVQDVSR # MLDASKDDIRELWAHPTVKGLIVRRRLKLDEWSEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g149 ### # start gene g150 Scaffold_2 AUGUSTUS gene 716471 716833 0.98 - . g150 Scaffold_2 AUGUSTUS transcript 716471 716833 0.98 - . g150.t1 Scaffold_2 AUGUSTUS stop_codon 716471 716473 . - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_2 AUGUSTUS CDS 716471 716833 0.98 - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_2 AUGUSTUS start_codon 716831 716833 . - 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MNPHTVSNDTLRGLGVLWERDEYETKQSRKEATYHDAGKMSIENPAVFVVSPVYLKKMSSEVLDDSFVVIGPFSKRGD # AEDRVNDIESIVLEAPNYFWTLSPLSNLARRRSVLSEKAKPI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g150 ### # start gene g151 Scaffold_2 AUGUSTUS gene 721997 723101 0.36 - . g151 Scaffold_2 AUGUSTUS transcript 721997 723101 0.36 - . g151.t1 Scaffold_2 AUGUSTUS stop_codon 721997 721999 . - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_2 AUGUSTUS CDS 721997 722701 0.72 - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_2 AUGUSTUS CDS 722823 723101 0.37 - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_2 AUGUSTUS start_codon 723099 723101 . - 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MDYNDESNDMRNVANIEWTSYNNDINGHSMPDVPQLQGREALAKATKDLMSLDAEGWNSAPVMHPYQQQHSYNFMDHQ # SSQYGYNLHNHRHSNPISVSPPSTLGPSQDPRIGSNMRSSFNSMGSPPTTTSSASFSVASSSRHGVPSTSTLSSPTLSSESLQRSGSPGGNTSNKRQL # DALSYPSPNKRSRPSPPASSLPNKTTLLSPSQKKANHIQSEQKRRANIRRGYEALCDTVPALREAIRLEEEAQLALDSNGNGKKPKRGKRAKVDDGTG # EKIDGRAGPRSETSCSERVSCCDITIIRFVHIMHIMSQLLNTSKNFCMTVKTF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g151 ### # start gene g152 Scaffold_2 AUGUSTUS gene 726137 726487 0.73 + . g152 Scaffold_2 AUGUSTUS transcript 726137 726487 0.73 + . g152.t1 Scaffold_2 AUGUSTUS start_codon 726137 726139 . + 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_2 AUGUSTUS CDS 726137 726487 0.73 + 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_2 AUGUSTUS stop_codon 726485 726487 . + 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [MQLEVSLLIVRPQVAADLWPIEDTHLPKNSPQDTETREESEVSIEEQINAEVIAIKRPKSDQKFGEWQGGSVNLLDHK # SQQRVVRPILPAVSSFLLMTSKYISHDFSGVHIVQISC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g152 ### # start gene g153 Scaffold_2 AUGUSTUS gene 730084 730530 0.9 + . g153 Scaffold_2 AUGUSTUS transcript 730084 730530 0.9 + . g153.t1 Scaffold_2 AUGUSTUS start_codon 730084 730086 . + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_2 AUGUSTUS CDS 730084 730530 0.9 + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_2 AUGUSTUS stop_codon 730528 730530 . + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [MQQNHRSFSSHSPHLHPAANHNGEWSRRHPGATHAWARRSYQHPHEQKSNSAGPSNSSASGFAQQGFRGFTPHSGRST # FMDSSSIHANAATDGDKSMFRRRMESVHRDREKIEKVSGSVRAFQVLLVLVLISAVAAPSMRPSNMSTTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g153 ### # start gene g154 Scaffold_2 AUGUSTUS gene 740386 741566 0.54 + . g154 Scaffold_2 AUGUSTUS transcript 740386 741566 0.54 + . g154.t1 Scaffold_2 AUGUSTUS start_codon 740386 740388 . + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_2 AUGUSTUS CDS 740386 740405 0.92 + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_2 AUGUSTUS CDS 740443 740844 0.93 + 1 transcript_id "g154.t1"; gene_id "g154"; Scaffold_2 AUGUSTUS CDS 740894 741028 0.58 + 1 transcript_id "g154.t1"; gene_id "g154"; Scaffold_2 AUGUSTUS CDS 741077 741566 0.99 + 1 transcript_id "g154.t1"; gene_id "g154"; Scaffold_2 AUGUSTUS stop_codon 741564 741566 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [MLLLPFWTLVSSEYERISQAPPPWTPPSRFDNIQSLKTSSQQEPFDLLIVGGGATGAGAALDAASRGLRVALVERDDF # AAGTSSKSTKLVHGGVRYLQKAIMELDREQWALVKEALKERKVFLHTAPYLSHMLPIMLPVYNVIQLPYYFAGCKMYDILAGSENMSSSYMMSKSKAL # ETFPMLKQEGLVGAVVYYDGQHNDSRMNTALIMSAVKHNAVVANYTEVLSFYKSNEKLSGARVRDELTGEEFDRLSFFEYGTMLTTLQGIINATGPFS # DALLHLSSQASTDPTCPKPASSAATPASKHKNIVAPSSGIHITLPNYYAPKTMGLLDPATSDGRVISSYRGRAV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g154 ### # start gene g155 Scaffold_2 AUGUSTUS gene 747512 748354 0.53 - . g155 Scaffold_2 AUGUSTUS transcript 747512 748354 0.53 - . g155.t1 Scaffold_2 AUGUSTUS stop_codon 747512 747514 . - 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_2 AUGUSTUS CDS 747512 748354 0.53 - 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_2 AUGUSTUS start_codon 748352 748354 . - 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MAIEADAQCRRAFEFQDRNRRKFHAIQASNERRSAERDFARYERENRTEVRREKWTERPGSPLERRPATKRPGSPVAR # PPLQTTLAIRHAPALTPLPTPTSTKRKGSKTPEPSSTIVYSFSTPNSSKSVPPRCISPKNVLMKCAALTKKTPERVYNPNTYNPNWAAETDHIARRAA # RTTDPATSARIHPPPRPRQHDPNLCSRNCPIHSRPKEPKASASHVPVPPTRPPVPVRPPRPPTISLSIHSKPSREEIPVAVVNDANYYAIKAQSQAKG # YMPHRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g155 ### # start gene g156 Scaffold_2 AUGUSTUS gene 749553 749924 0.72 + . g156 Scaffold_2 AUGUSTUS transcript 749553 749924 0.72 + . g156.t1 Scaffold_2 AUGUSTUS start_codon 749553 749555 . + 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_2 AUGUSTUS CDS 749553 749924 0.72 + 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_2 AUGUSTUS stop_codon 749922 749924 . + 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [MSKRETSDVLNETEFAEGAPSKSKPRLNYRTLDLATASPISGIMKSVQFLPYPNLTFQTVPSKSIPFQQPMPLTSFSY # DSQHTQEFNDSALRYYRSPPPTRNLGMDMNIGYVGQRNGLVLTLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g156 ### # start gene g157 Scaffold_2 AUGUSTUS gene 752336 753697 1 + . g157 Scaffold_2 AUGUSTUS transcript 752336 753697 1 + . g157.t1 Scaffold_2 AUGUSTUS start_codon 752336 752338 . + 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_2 AUGUSTUS CDS 752336 753697 1 + 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_2 AUGUSTUS stop_codon 753695 753697 . + 0 transcript_id "g157.t1"; gene_id "g157"; # protein sequence = [MPSPLRRGSLGPRPRTPANTGNVGASTSTATTESNTQTLFTSILAPPPSNQARTILNANDPPVAAPVRPAMSPKVRNV # NNDKVVKSIAESTRAHAKSRRQPDKRKDKRKSRKAVDADGDVDMEAAATLTSLLLHHRPSIAGSASSPRSSIDGSEAGTPYSQQPISARSSFSSIPPS # NTASNASISYRSNTPPRSSNTNVQQQQGQSTPRPAPTDNEAADLMLFLATSPSPARPTTSKDARDAAAFHALTHSDNGNMMRAKPRVLFPTQGDFADE # SGITHPSSAVGTRLLNSDGFTNSNISRTGTDVEPPVHHSTTDRSSSASQQHTAVQLQQQPASSTVHGTYLLPPPSLPSSQRPTPSSFPSSPSSLRNES # SPRPEHPIAGGQTDFNFSEYIHASPTRPGSGSGHPANSQKANLGLRADVGRKLFEEEQIRLQQKRRPEDRGLEAGIDLVRT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g157 ### # start gene g158 Scaffold_2 AUGUSTUS gene 757669 757977 0.44 + . g158 Scaffold_2 AUGUSTUS transcript 757669 757977 0.44 + . g158.t1 Scaffold_2 AUGUSTUS start_codon 757669 757671 . + 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_2 AUGUSTUS CDS 757669 757977 0.44 + 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_2 AUGUSTUS stop_codon 757975 757977 . + 0 transcript_id "g158.t1"; gene_id "g158"; # protein sequence = [MASYLRSWLTLPTVASTSSEAISTFQSSLEDEDEGSDTEREDNDAPPAFPSLNSAQRMQSIPTILTDSQLMPPPPNPN # FRNRTIGVSTPGGLAVPPTTTKPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g158 ### # start gene g159 Scaffold_2 AUGUSTUS gene 763333 763755 0.99 - . g159 Scaffold_2 AUGUSTUS transcript 763333 763755 0.99 - . g159.t1 Scaffold_2 AUGUSTUS stop_codon 763333 763335 . - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_2 AUGUSTUS CDS 763333 763755 0.99 - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_2 AUGUSTUS start_codon 763753 763755 . - 0 transcript_id "g159.t1"; gene_id "g159"; # protein sequence = [MSKLTSFAIIGSGNIGSFVISAFLGQAAPPSTLIVLSRNPESKNFPPEVQVIRVDDYGDINAVARILTAHKIDAVIST # VGFGGISAQKKMADAAKLAGVKLFAPSEFGSPTDGAPSEYRPLQERDEVAGKFLPLLDKWCY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g159 ### # start gene g160 Scaffold_2 AUGUSTUS gene 764306 764719 0.91 + . g160 Scaffold_2 AUGUSTUS transcript 764306 764719 0.91 + . g160.t1 Scaffold_2 AUGUSTUS start_codon 764306 764308 . + 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_2 AUGUSTUS CDS 764306 764719 0.91 + 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_2 AUGUSTUS stop_codon 764717 764719 . + 0 transcript_id "g160.t1"; gene_id "g160"; # protein sequence = [MAPVATNETSSTTPNVQSLKDDASKVFNPFYSPAIADDGDESYIHSQYKVGVSSRSLIVQIWNIETFQPFFPNLSWPP # LEEVEVTERALFADPEKKSLFRAAKKVRHYTPVIGTEISGIDLRQLSDSQKDELYVPKY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g160 ### # start gene g161 Scaffold_2 AUGUSTUS gene 766851 767225 0.57 - . g161 Scaffold_2 AUGUSTUS transcript 766851 767225 0.57 - . g161.t1 Scaffold_2 AUGUSTUS stop_codon 766851 766853 . - 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_2 AUGUSTUS CDS 766851 767225 0.57 - 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_2 AUGUSTUS start_codon 767223 767225 . - 0 transcript_id "g161.t1"; gene_id "g161"; # protein sequence = [MRKQAKLQNGEPPPKIDLDTLKASTKAAEAERNAKADENTAPGSTPQHHQGSFQVMSVMSPVEAQNSPTTSSDPNRLP # AHHQTILPPPTGSGSMHPPPPPWAAANIPRAFTPSDQFQTPIFHSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g161 ### # start gene g162 Scaffold_2 AUGUSTUS gene 768106 768864 0.45 - . g162 Scaffold_2 AUGUSTUS transcript 768106 768864 0.45 - . g162.t1 Scaffold_2 AUGUSTUS stop_codon 768106 768108 . - 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_2 AUGUSTUS CDS 768106 768864 0.45 - 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_2 AUGUSTUS start_codon 768862 768864 . - 0 transcript_id "g162.t1"; gene_id "g162"; # protein sequence = [MPPPSPYHQMSPIAAPPSSMPHTSLPPSPHTQMQHQPSAPPTHPAYSYQQQQQQSYMPRSNTQHIASHPPSSHPSHNY # HPAPPQHPQSQAPQQIQAPPPSHSTLSQPHPHMPYPSPSPSVSQEHHWEPHHQSQPQHPQPVHPVQHHNVHHAPLPPPPTATPSSLSIQHNQYSHPPP # PPPPVVHHHQQPQHQHQPQHTIYMQPMNPPSSTSSQTSLARAAPPIVTNSIAAPEVDIRTPYPMKCKTIGARKYNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g162 ### # start gene g163 Scaffold_2 AUGUSTUS gene 768952 769509 0.63 - . g163 Scaffold_2 AUGUSTUS transcript 768952 769509 0.63 - . g163.t1 Scaffold_2 AUGUSTUS stop_codon 768952 768954 . - 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_2 AUGUSTUS CDS 768952 769509 0.63 - 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_2 AUGUSTUS start_codon 769507 769509 . - 0 transcript_id "g163.t1"; gene_id "g163"; # protein sequence = [MSAHHAAQRQHQYSIPLPPPPSSALNDDLRLPSIKDLAFKYERPRQEGLQSVGGAPQAMSEFSVSSNQDRSRGHSQSW # GRSSHPTPPAPTPISTHHLQQQHTPPLSAGHEPSSAKSSEYSPRHDNGGYLTPGMPLSAQMMPLPGSVSTGSVIRSDDPSQMQNKRSRPSSLTPIAAL # PRDSRPPHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g163 ### # start gene g164 Scaffold_2 AUGUSTUS gene 775808 776440 0.99 - . g164 Scaffold_2 AUGUSTUS transcript 775808 776440 0.99 - . g164.t1 Scaffold_2 AUGUSTUS stop_codon 775808 775810 . - 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_2 AUGUSTUS CDS 775808 776440 0.99 - 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_2 AUGUSTUS start_codon 776438 776440 . - 0 transcript_id "g164.t1"; gene_id "g164"; # protein sequence = [MAVNDYAVNSIAAAQASSPSILYSIIPFYSVPSTQETVLRTFVEAMGVLSTTIERLVIEAEVQLANLERLEERLSALH # ELVSREDSTISSAKSELLSELWTQLGGNKRTLSGYDDHLKLLNGLGEYRKQALVHVVSSLQTLRALSDDMEDIRERVSEPELASSHIPVEVHMNSIRT # GLQRLKHSRVKAREREEEAIKKVLGEEHFAALEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g164 ### # start gene g165 Scaffold_2 AUGUSTUS gene 778548 779942 0.56 - . g165 Scaffold_2 AUGUSTUS transcript 778548 779942 0.56 - . g165.t1 Scaffold_2 AUGUSTUS stop_codon 778548 778550 . - 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_2 AUGUSTUS CDS 778548 779203 0.59 - 2 transcript_id "g165.t1"; gene_id "g165"; Scaffold_2 AUGUSTUS CDS 779479 779518 0.68 - 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_2 AUGUSTUS CDS 779607 779942 0.64 - 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_2 AUGUSTUS start_codon 779940 779942 . - 0 transcript_id "g165.t1"; gene_id "g165"; # protein sequence = [MSTVPETPRSKTSFNPSTPTTSRITGSHVQSSPHYTTTRRHSLYGVEDRIIIDPGSLIWKVGFSGEGRPREVFYAGGK # AAKGLWDLTRATDGAERQEEDKLLDIRLEQSLRAILKQGRSSSSKIHSGQRFLSHLRSLLLLFGTYVAPTSPGIANLPQASRSMRVPQEILTNEVLEE # IKTRCCFVGESLAPNASEPVDNGPTPDDSVVSSDMDVPPTSDPAQSESEFSFAGRESGVSSQHDSSEYSVISTPRMGGKPQDRPPGSENRLQVLADMY # MRHSTATDLQLRVEPPVSMANSSILGYGTIIIPGWIRERTAEVLFEGGDVDEGSLAEIILDALLKVCYK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g165 ### # start gene g166 Scaffold_2 AUGUSTUS gene 780404 781072 0.98 - . g166 Scaffold_2 AUGUSTUS transcript 780404 781072 0.98 - . g166.t1 Scaffold_2 AUGUSTUS stop_codon 780404 780406 . - 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_2 AUGUSTUS CDS 780404 781072 0.98 - 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_2 AUGUSTUS start_codon 781070 781072 . - 0 transcript_id "g166.t1"; gene_id "g166"; # protein sequence = [MPAHLFPFQENNKTEFHESRSASSGSRPETPLGHLPIIPTSPLHVEISDERLQSIPEDVQSVTSRLSSLSETCFTPVP # PSPTTSTTSTEFSSFTAASGISASTTLSTSTAVTSVLSGNLTIKAAHNQSIILLRTSRETEFAEVRQRIYDKFLAQEKITLTEAFAIAFVLQDPGEPR # SSKGKGRARSNSLGGGSSQMILVTNQNDWDRALATTESSKDYCPGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g166 ### # start gene g167 Scaffold_2 AUGUSTUS gene 787891 788315 0.59 - . g167 Scaffold_2 AUGUSTUS transcript 787891 788315 0.59 - . g167.t1 Scaffold_2 AUGUSTUS stop_codon 787891 787893 . - 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_2 AUGUSTUS CDS 787891 788245 0.61 - 1 transcript_id "g167.t1"; gene_id "g167"; Scaffold_2 AUGUSTUS CDS 788296 788315 0.59 - 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_2 AUGUSTUS start_codon 788313 788315 . - 0 transcript_id "g167.t1"; gene_id "g167"; # protein sequence = [MPQIPHGGSTTVNSLVVSTALYNLVDSPVGILPVTHVDAHKDQITEAWTSPNSSKRSVLMEQRLYTAANPMYNPIEMD # CMPVSVQIVGKKWEDEKVVAMMTIVDDILGPNRGFGPRGFVNHVTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g167 ### # start gene g168 Scaffold_2 AUGUSTUS gene 799974 800336 0.95 + . g168 Scaffold_2 AUGUSTUS transcript 799974 800336 0.95 + . g168.t1 Scaffold_2 AUGUSTUS start_codon 799974 799976 . + 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_2 AUGUSTUS CDS 799974 800336 0.95 + 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_2 AUGUSTUS stop_codon 800334 800336 . + 0 transcript_id "g168.t1"; gene_id "g168"; # protein sequence = [MFDSGLPPGYDANDQDVDLPAYSSLSGVGREVPSNLTDLSDGASKEFTYNIPLKGNKSSASLVLYGNALISKHLPTFL # EDSKVDGLVKVDVESGESINAVVISVRVVTCTLLVHEEGLHM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g168 ### # start gene g169 Scaffold_2 AUGUSTUS gene 802519 802932 0.55 - . g169 Scaffold_2 AUGUSTUS transcript 802519 802932 0.55 - . g169.t1 Scaffold_2 AUGUSTUS stop_codon 802519 802521 . - 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_2 AUGUSTUS CDS 802519 802932 0.55 - 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_2 AUGUSTUS start_codon 802930 802932 . - 0 transcript_id "g169.t1"; gene_id "g169"; # protein sequence = [MPMSKSEIQRGTSWAKSGTLWVLSLQSADIHPSTPVLQTYPFGWEPDADGFRGQVFATPDNSTVIVSVKGTSAGLLGG # GGPTVKKDKLNDNLLFSCCCARVDWTWTTVCGCYRGGWKCDQGATTAVTSRERVNSELP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g169 ### # start gene g170 Scaffold_2 AUGUSTUS gene 803504 803839 0.48 + . g170 Scaffold_2 AUGUSTUS transcript 803504 803839 0.48 + . g170.t1 Scaffold_2 AUGUSTUS start_codon 803504 803506 . + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_2 AUGUSTUS CDS 803504 803839 0.48 + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_2 AUGUSTUS stop_codon 803837 803839 . + 0 transcript_id "g170.t1"; gene_id "g170"; # protein sequence = [MSSYKIDIPPTALSTLKSRLENAVFPDELEDSGWAYGAPLADIKRLVARWRDGFDWRHEEQKLNAELPQFTRDIEVDG # FGTLNIHYVHKKSERGLGIPLLFVHGCEHRDCT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g170 ### # start gene g171 Scaffold_2 AUGUSTUS gene 807283 808177 0.7 + . g171 Scaffold_2 AUGUSTUS transcript 807283 808177 0.7 + . g171.t1 Scaffold_2 AUGUSTUS start_codon 807283 807285 . + 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_2 AUGUSTUS CDS 807283 807520 0.75 + 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_2 AUGUSTUS CDS 807564 808177 0.87 + 2 transcript_id "g171.t1"; gene_id "g171"; Scaffold_2 AUGUSTUS stop_codon 808175 808177 . + 0 transcript_id "g171.t1"; gene_id "g171"; # protein sequence = [MRQLGCFGLAVLFSEQWVLDLDPEDFTTWDCEDLDRPCGYLKQNASAKDRAPFSLVVLVQTSMCLRLFFATYLGDASP # EVACNYSGPFCCDRHPGSGFTLQAFLPGPLLTVSESDVPSAETSEKRKHKSVRPLAQRKALYRTLQEWLENAHCNDRLSAIRPRYYILSDANIKTLAN # AKVGELQCHSDVTNRIAQTAEWGVKWATSISQVIVDFDSAILASQHSAAKRAHKKAKIGESSYPSAEFIVDSDVDDDIMEAFLQDEKSSRKTQADLRR # VLQIKTNFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g171 ### # start gene g172 Scaffold_2 AUGUSTUS gene 808213 810760 0.64 - . g172 Scaffold_2 AUGUSTUS transcript 808213 810760 0.64 - . g172.t1 Scaffold_2 AUGUSTUS stop_codon 808213 808215 . - 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_2 AUGUSTUS CDS 808213 810140 0.9 - 2 transcript_id "g172.t1"; gene_id "g172"; Scaffold_2 AUGUSTUS CDS 810226 810760 0.65 - 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_2 AUGUSTUS start_codon 810758 810760 . - 0 transcript_id "g172.t1"; gene_id "g172"; # protein sequence = [MEASSFKAFDGSDTMSGIEYDHTVDLDTRQRRPKRSMVDKVKLVLHSLRDAHLSPTEFISNLYNSKYQEFDFYKQKLF # EDGNHKHLHQLLDSLWADPRGQNILKSWMHTPAIEYSAACVSREFEAVKPHLQMYSQSVSANYMQSWSLERIVEPLLMTHLPVWSHILRSASETKESQ # DSEQTINYSSSCTYTFTSLCKNSARSRHVCMGHWSFKVSLRGYAPCKFDTIIYNYWENLGTCREYINTTAILVANEYPTADAWDNVNLSTSGFVEQRP # DAPSRVQSGTLPVIYKLHNAAWEDMLLKPMTDKLKASSNLMEADIAPTEDQLESYMHQACINIIEPLTKYIEGFNNDKYKRSSTLQHKERRPLPRGLK # TDFYPLRLNQHEEASVNGNLLVQDDIHLNQLKQEDGDNSKLALYAKPLYADLLTLVRTRGCVHVRRLDTNPWTRREIYQNGMGILHFLMNLVWVVLHT # YRGEVQQIGSLRNFFVKLEKKRLDGDKPDYYTLLSAFDQILDGLLLHAWQKQCGFPNLTQFATSQPSPECLLKIAARILQAYASPMEEPLQEMDEGSE # DSNDSDSVSPEFDPVLRNVQLLIRDLLYVREIVQATSAGDFGRIEDLFPDMLRIFRGAGSNNYSTEILHWIHRVKNMWTPAFANIMRDNMLINVSGID # GHFMGIDTNIEHLIKEIKRLATAKGIHSDWEKFGHLSACLKEIQILKDQVGRSLETSYKNKTSKEINTTMLVWRIVEHAAEYDILTINPDREGNLNCK # PLTDLHAKGHAQLASSSLSTFNKRIRAFIEGMPFEEEKDMLPVMEFNNELDEGFDN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g172 ### # start gene g173 Scaffold_2 AUGUSTUS gene 814321 815844 0.13 - . g173 Scaffold_2 AUGUSTUS transcript 814321 815844 0.13 - . g173.t1 Scaffold_2 AUGUSTUS stop_codon 814321 814323 . - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_2 AUGUSTUS CDS 814321 815138 0.58 - 2 transcript_id "g173.t1"; gene_id "g173"; Scaffold_2 AUGUSTUS CDS 815195 815721 0.49 - 1 transcript_id "g173.t1"; gene_id "g173"; Scaffold_2 AUGUSTUS CDS 815792 815844 0.23 - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_2 AUGUSTUS start_codon 815842 815844 . - 0 transcript_id "g173.t1"; gene_id "g173"; # protein sequence = [MQSRPMENSVLEQLKGDFVEFEEGDPRRSTPAVPDEVDGEMLGDVDIGSAPDAVPVPPANKNQIQNSDLSVPSMPTTP # SMPNYEGLPELFAPQPPPAQPLQHGQIPLQPIHEPEIGPRRGTRICEPSARQLQFQESAKREQSAFERNLAWAQDSGTGIDELEENSLAMVAKSPFAF # AAESSDKWVPNTYKQAMRLLDLGGPTSECEPYRRRWVYAIKWSKDGEVAKRKACYVAQGFTQIEGVDYDKTYGAVARMESVRIVLVIIAVLGLFMFQV # DFKAAFLNLPINHDVYMKQPEGFVKEGEEHKVCKLNKSIYGTMQGSHDWQDTLGKGYEEDGYIASRADPCVRYRRIDDEYTLSTTYGDDVNGTSSTES # GRKKAIADLGKRWESSEVNSGVLLGMTIFQDPSSKSITISQKAYFERMLEHFGLETIRTRHTPLDPKTKSPNLRIHYPKMTAGSCQTNLTVRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g173 ### # start gene g174 Scaffold_2 AUGUSTUS gene 825105 825911 0.96 - . g174 Scaffold_2 AUGUSTUS transcript 825105 825911 0.96 - . g174.t1 Scaffold_2 AUGUSTUS stop_codon 825105 825107 . - 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_2 AUGUSTUS CDS 825105 825911 0.96 - 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_2 AUGUSTUS start_codon 825909 825911 . - 0 transcript_id "g174.t1"; gene_id "g174"; # protein sequence = [MALQIFNQLDRSDVDANRAWLKRAIQAAIKEYHTIWVAEPRIDPKTGLSRYRPAGLGIPPETEATHFTHILEPFAHKH # GLSILEFSEKYNDGVLKEPELDEYFLHDRAVRESGHDTTYRFEKRCANLATIDLQALLYKYEIDIGTAIREVFDDELELEEEFPLAPFPITPAAYAKT # TRESSKGRSQSSDEWFKRAEFRKQMIDKYLWNDNKSLYFDYDTAKEQQILYESVTALWALWAGCASEEQAWKLVYVPFWFNHFPSQFSYICL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g174 ### # start gene g175 Scaffold_2 AUGUSTUS gene 826105 826602 0.32 - . g175 Scaffold_2 AUGUSTUS transcript 826105 826602 0.32 - . g175.t1 Scaffold_2 AUGUSTUS stop_codon 826105 826107 . - 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_2 AUGUSTUS CDS 826105 826602 0.32 - 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_2 AUGUSTUS start_codon 826600 826602 . - 0 transcript_id "g175.t1"; gene_id "g175"; # protein sequence = [MLSNLLQELALARDHGRKRIVLDEARLTENPVDRLSRMIKNSFWHSLTRRIDGEGLEIICADPKNRTGRVNPRIYVPH # GEPAMADYYRKVAREKPHLNLDVQVLPVKPDDPSFVKSLNNKPGILALAMNESDDGRGGKILKGIPFIVPGARFNEVRTSPCSCRSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g175 ### # start gene g176 Scaffold_2 AUGUSTUS gene 835517 836236 0.56 - . g176 Scaffold_2 AUGUSTUS transcript 835517 836236 0.56 - . g176.t1 Scaffold_2 AUGUSTUS stop_codon 835517 835519 . - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_2 AUGUSTUS CDS 835517 836236 0.56 - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_2 AUGUSTUS start_codon 836234 836236 . - 0 transcript_id "g176.t1"; gene_id "g176"; # protein sequence = [MRVEEERGGRLAKIDELSTQLKRIERVALDNSAYLDENIRIHALWSAIRALSSSALSSHVRKPFREELRVVRHISAAR # EDPVVSAALETLETSEIPDIGVEPFADLASWYTTSVAPKVSTVALVPDQDAGLLSHLASHLLSSFRFKRHGLVEGNDVLSVLSRAEYYLNEKDLDSAT # RELNQLSGTAKVMLNDWLEAARKRLEVEQALEVSRLHRACRWTPLTQDQVVHAQATLASLLIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g176 ### # start gene g177 Scaffold_2 AUGUSTUS gene 836336 837307 0.6 - . g177 Scaffold_2 AUGUSTUS transcript 836336 837307 0.6 - . g177.t1 Scaffold_2 AUGUSTUS stop_codon 836336 836338 . - 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_2 AUGUSTUS CDS 836336 837307 0.6 - 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_2 AUGUSTUS start_codon 837305 837307 . - 0 transcript_id "g177.t1"; gene_id "g177"; # protein sequence = [MLEYGEANHWDTMTLHSAIDYTVRTATSLKDFVTEKVNGAPTTVKEVKTMAEKTAHDAKAATIRTIAASKERVKDVAA # HVKTDVQKGEDKVTGKAAAIAKHQSEELIEGLSDLVKKAEEALALKPGSSSNPPGAPTENESTPEFKTTDVYEAPLPVGFEPPPGFSRPPTPKKEPPP # PKYVDLPLVAPAVSDLASSEPIISHLAGTIDNLASFLKSNPEAASRVTDVLDLAKADLSSLAQRIEGAKEEERKGLETMLDEQTREYTLKLLEVEMEA # QDRLDNQEEEFRKLFDLRQSQLVQTYRQKLEEELKTQTDLINERYVATL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g177 ### # start gene g178 Scaffold_2 AUGUSTUS gene 837889 839405 0.55 - . g178 Scaffold_2 AUGUSTUS transcript 837889 839405 0.55 - . g178.t1 Scaffold_2 AUGUSTUS stop_codon 837889 837891 . - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_2 AUGUSTUS CDS 837889 838380 0.88 - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_2 AUGUSTUS CDS 839175 839405 0.6 - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_2 AUGUSTUS start_codon 839403 839405 . - 0 transcript_id "g178.t1"; gene_id "g178"; # protein sequence = [MKVSVDDRHTYDVQLQDANDICVFAHRAQNATWTGERSAPRWKARAKEGIITNWLVRDGFAYASDESEEVEEPVLKPL # WFDTLLGAGLDVDLCRVLEENTKNVNAEKEKRDQRIAREEKARIKQEKTAKGTKLEQRKRRKAKREESDSDNADELDMDMDVNADDEADLRGPENVDE # LDPSPPVTRMKRRRSLEDGEGERDSESRPSVLATLQDKIAFPEWFSVPIVDIPHAKRLKTCEGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g178 ### # start gene g179 Scaffold_2 AUGUSTUS gene 843432 845654 0.54 + . g179 Scaffold_2 AUGUSTUS transcript 843432 845654 0.54 + . g179.t1 Scaffold_2 AUGUSTUS start_codon 843432 843434 . + 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_2 AUGUSTUS CDS 843432 845654 0.54 + 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_2 AUGUSTUS stop_codon 845652 845654 . + 0 transcript_id "g179.t1"; gene_id "g179"; # protein sequence = [MTSQMPPPLDGSSDSISHSSVRNRRNLRSLIANSASRTKSLPPGVQRNTLPTGAVARPPVLPLSSAQADSSQSQTFSA # SQTRPKSTSVSVTSSARPSPRFHVTNPTELPPSTNPNKVSAAKSHELNRPLPAPVFSTGSGSEGNVARKQSGPPSPPRINTTGLHLQSPPLSAASNCS # PFPSESNSTASSTSSSTSFTPKRMSKVILPIGPTHVPAPLPLHDASFHNERTTPVSALSSPSGGTRSVVRPLPPPPSLPKLVGASLAGPRPRSSSRGA # SSKVRSRTNSAVGRGDAISRPQLSFDPTSSSYVIKTANEVNGQFSTIASGVESIKSGSRSRSARMHTHNRSHSAQTKNFSSMILHDVRDIRDTSSSVS # SSNDHSVVTRKSKQVVRSAPCSDTEEGSSSLSKSVRIRQTRQKLVLHNPSSSMTVRSAPTSDTEDSPTYELTSSPLLLPPTGSIKDMLPKPLTIRTDN # ILQPLPTRPAFLSTQSNPIEPLTIVRRISPPNPAQGSTFKLTSPPLPSLTEDIGYADAGFVDDSRVYADDGFDGPGGLGAFSTSVDPDVDLDIGEMVF # NSRPPSGEFMGPSVMDLDMDARGRHASRPTPVPRWKSADSHATNADLQRDEHGKHADTKSRHNASRGSRSASQAVIMSSFKAHVHVHPVHELELGPSP # INMDLEPEMVFSKNPRSFTPLGSVPGVLDMGERRYIRGKWRSPSPVTPTGAVPPRNPAAGQFAPVRARGFYEDW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g179 ### # start gene g180 Scaffold_2 AUGUSTUS gene 846976 847894 0.46 - . g180 Scaffold_2 AUGUSTUS transcript 846976 847894 0.46 - . g180.t1 Scaffold_2 AUGUSTUS stop_codon 846976 846978 . - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_2 AUGUSTUS CDS 846976 847697 0.81 - 2 transcript_id "g180.t1"; gene_id "g180"; Scaffold_2 AUGUSTUS CDS 847846 847894 0.46 - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_2 AUGUSTUS start_codon 847892 847894 . - 0 transcript_id "g180.t1"; gene_id "g180"; # protein sequence = [MVVNQVEKQQRDIGPASQLICSSSASIFGAKPNNPPATGSSLFGQPNTTGNSIFGSSQPQTNTSTSNSSFGGSNAFGQ # QNQQQQQPAGSLFGQTQQQPATGGSIFGQPAAGGSIFGQPAQKPAAGSSLFGQSTQQQPAATGTSLFGQPAVQPTGNLFGQPAQQPATGSTNIFGQST # QQPSTGVGGSLFGQSTQQPAANTSIFGQSTQQPAPGASIFGQPAQATQSAGGTSLFGQPAQQQQQGTSTFGGGGAFSCSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g180 ### # start gene g181 Scaffold_2 AUGUSTUS gene 852142 853581 0.55 - . g181 Scaffold_2 AUGUSTUS transcript 852142 853581 0.55 - . g181.t1 Scaffold_2 AUGUSTUS stop_codon 852142 852144 . - 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_2 AUGUSTUS CDS 852142 852498 0.97 - 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_2 AUGUSTUS CDS 853366 853581 0.98 - 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_2 AUGUSTUS start_codon 853579 853581 . - 0 transcript_id "g181.t1"; gene_id "g181"; # protein sequence = [MYEKTIKVLSELPTPPIELKKNVRLNLARARKAVVPWTGRPENGIEVKIDSGLLPWQAAENILSKSSVVSRSASARVG # IENLELLETIFEEADALLQDLEKNPYDPNDFDHSDPGFNLSFFGNIKGNAFAYVIQLKIYFLSHQNLRSSKALYHNMLGNFGKDQKVETVRKHYTSAM # ELYILAAAWFTRRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g181 ### # start gene g182 Scaffold_2 AUGUSTUS gene 864128 864784 0.99 - . g182 Scaffold_2 AUGUSTUS transcript 864128 864784 0.99 - . g182.t1 Scaffold_2 AUGUSTUS stop_codon 864128 864130 . - 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_2 AUGUSTUS CDS 864128 864784 0.99 - 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_2 AUGUSTUS start_codon 864782 864784 . - 0 transcript_id "g182.t1"; gene_id "g182"; # protein sequence = [MKGSRSLILSCFLAFALVQSTRAAHEAKLVARIDILGTGTDATTSAAATTSDTSTSSSSSSATSATATSNTASSTAPP # TSTTSSTTATSATPTSATTPTSTGETSQTSAQSTAGNTQTSATAAPTRSVVTSTAANGETVIVTQTIPASSATSASASSSATSGADNSSDDDSSGLST # GSIIGLSVAGGVALLGIISFFVWKFTRKRFSDYDDSESYEII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g182 ### # start gene g183 Scaffold_2 AUGUSTUS gene 878099 878734 0.9 + . g183 Scaffold_2 AUGUSTUS transcript 878099 878734 0.9 + . g183.t1 Scaffold_2 AUGUSTUS start_codon 878099 878101 . + 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_2 AUGUSTUS CDS 878099 878734 0.9 + 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_2 AUGUSTUS stop_codon 878732 878734 . + 0 transcript_id "g183.t1"; gene_id "g183"; # protein sequence = [MPVVDDQEFANVNGIEYSLDQLLGSGTSTPSTPTDSSPNLPHKFGSQVDASVVESSRDFQETLAHDTSVAFEMGVKPT # LERSKSRTSVKPGNALFFTVIYLAPGDYHRFHSPTAWVVEKRRHFVGELFSVSPYIAKRLENLFVLNERVALLGKWRYGFFGMVPVGAINVGSIKINF # DQVIIFCDTPQVKSSSVTGITDERTWSSTAPRYLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g183 ### # start gene g184 Scaffold_2 AUGUSTUS gene 886977 888523 0.31 + . g184 Scaffold_2 AUGUSTUS transcript 886977 888523 0.31 + . g184.t1 Scaffold_2 AUGUSTUS start_codon 886977 886979 . + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_2 AUGUSTUS CDS 886977 887008 0.31 + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_2 AUGUSTUS CDS 887098 888523 0.82 + 1 transcript_id "g184.t1"; gene_id "g184"; Scaffold_2 AUGUSTUS stop_codon 888521 888523 . + 0 transcript_id "g184.t1"; gene_id "g184"; # protein sequence = [MSMAYEYQGEILAAKTAGVPSILVTNFTFDSVYSYLATTFIDEQHSTHISGSSLLSSDVPVPHSFLEPLVSQIHAGYR # CADLLLLLPGHIPIPSFPNQPSLPATDWVDSHRIGFLHRSIEHLLRLRETPFKCTLHDHIPFPPVTALAQKSASASVPRKVLPMPLLVRSPSSSVERS # PYTPEGRARILESAKVPPEKHDPETTKILVVSFGGQVLKWPRTHSSVVSAQYQMEECNTPTNSPKMGLGINWKNSKTPRPSQIEIPSPSASTRTRHPA # NSLGFKDHRDIDPQPISSPRLATPSHIWIPGAPPVVNPLSPTISPSSSWISSSSWDRLAGVDVVHSPPYSGRPKEKENELPSSTSSSSGLNADSSSTF # PLTDMVNIPASLREVSPGAIPQCKENSDKIYHDGVGSRLENMSLGGDGCNEIDHPQLLPESSWIAIICGASDEQRLDTSSTLLKTFIWRPKTSTCPTS # PPSQTFCSANSDMVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g184 ### # start gene g185 Scaffold_2 AUGUSTUS gene 889090 889617 0.66 - . g185 Scaffold_2 AUGUSTUS transcript 889090 889617 0.66 - . g185.t1 Scaffold_2 AUGUSTUS stop_codon 889090 889092 . - 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_2 AUGUSTUS CDS 889090 889617 0.66 - 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_2 AUGUSTUS start_codon 889615 889617 . - 0 transcript_id "g185.t1"; gene_id "g185"; # protein sequence = [MENDTSKVAWWTNPARIETVRQLIEKRDARRKKIHEQIERAKKRNIDNNKKSKKRDNNSDNKDSGDRLPDTNTTAGNR # PAYSSSSSNSNCDETLVIDWESDSDSEGELQFEDVESPNMDLLSYGIKPWEHEEAKVSVLIHHTPGCSALISFDLGVSGCPRQSTHMILDILSFLYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g185 ### # start gene g186 Scaffold_2 AUGUSTUS gene 893324 893872 0.77 + . g186 Scaffold_2 AUGUSTUS transcript 893324 893872 0.77 + . g186.t1 Scaffold_2 AUGUSTUS start_codon 893324 893326 . + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_2 AUGUSTUS CDS 893324 893872 0.77 + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_2 AUGUSTUS stop_codon 893870 893872 . + 0 transcript_id "g186.t1"; gene_id "g186"; # protein sequence = [MEARNTRRKLEYNTRAENATEGAVEAGSLQVKEKENVLPNAQMQITNRKNKQFYPKRRTTSDEKSSAIKKSSTMSSSK # LQSIGSNTKEKERKKVKKHNARVAKRAAKRDQTEESAAPDRKKTSTTRTYYPESKTVKSLEKLANCGFTNDEVVDLMEFGVNPWDEDAHVSGHAFFSQ # NIYIER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g186 ### # start gene g187 Scaffold_2 AUGUSTUS gene 894402 895586 0.72 - . g187 Scaffold_2 AUGUSTUS transcript 894402 895586 0.72 - . g187.t1 Scaffold_2 AUGUSTUS stop_codon 894402 894404 . - 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_2 AUGUSTUS CDS 894402 895586 0.72 - 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_2 AUGUSTUS start_codon 895584 895586 . - 0 transcript_id "g187.t1"; gene_id "g187"; # protein sequence = [MQVACVFAHRMRNTQDHTPFGDVLKIALTSSPSNDFVSFCPSAARMTLSSINHSAYSLRRSSKAMHSPYECSTPPLRG # SQTASPAPCSPSKPSRRRTQTDVYTTHTSTEGTAWWVASTDEGEEVLSDEPPEDERVMHDSVLDTLKDGPVGTWGDKLHTLRTRVAQDGNRDVSDSIR # GIRVRDSICSSNGTATDTSIKAIRAKRVPRGPRMRMQSVSAESLTASRSRDTVKSFGSGMEGIESVMEYGESISSPDLSIFGQLAIATGGPSENRWRR # RRATDSTSTLNSSLYYDAHEGLLGITDNDEEELSRSVAVGVVPIVSRPASRLWCEENVASSECQDQTFDSLQSNDTSADRIDQLTSLCSETSDDDYEE # NAEKLRELLVIRASSSIRGRGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g187 ### # start gene g188 Scaffold_2 AUGUSTUS gene 896015 899130 0.53 - . g188 Scaffold_2 AUGUSTUS transcript 896015 899130 0.53 - . g188.t1 Scaffold_2 AUGUSTUS stop_codon 896015 896017 . - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_2 AUGUSTUS CDS 896015 898852 0.88 - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_2 AUGUSTUS CDS 898942 899130 0.53 - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_2 AUGUSTUS start_codon 899128 899130 . - 0 transcript_id "g188.t1"; gene_id "g188"; # protein sequence = [MTTFVTCSSSTTQHTPMHKIRRKPAPTLLSPITPITPLRAPNVTPAGLLPKATSNSAKPSVIPALVIHTRTASTSTSL # FTDHRYPPPDPSDPFAPLSVLRDRSRRCSTNAFLSSSYTFAAGSDDTGHLKGKKVGMASSDNLSVASSTKSSFMPVKGAKKPGVIRTFPNDFIKEKKR # SKHPQERISMCSVELHPDPLSSHVLDKKEDGVFGVLETPKKRSITPCPSHYESKVSPPTQFGTLGHYTPHSRQRTRSSFSALSSPSPTFKLSNRKQHV # LIPAPDAHPLPSLVRDRSESSVSGSSSSGTGYPNYGGNTGEPTSTPERVLPPASASTLSLGGPNASHLDISDSYALTMALLSSPQKHPYARSDAYTRS # QSSSSSRDSSPCRSDYGKGVKSEQTPKAAKTKKIDIGDTERPTSPSGSMFKLARFFTGGKVVSRKNSIGSLKILDGITSPKIERKKANSPPSRGRARS # RKLSISSMNISGPVAAPVSIPLGSDICHRVTDLPLIERSANRPRSQTTSGLPPSTLPNRLHSSPYHPETSFKSSASVSAIGITAADEFYIRDQGVEDE # VNKELNLSLLKPWTASIPRKRSSLSLSVLPASMSSEAGETCDAPSDIVSTLNLPDTSFATSEPRKNKGSSESAVSAGSMGSSYIHVVDSCGETVVKNE # PRYKREEDFTRTGPRRAPLPPRSKTEGLLKSTANHGIAGIKFPGFRRAQSSVQDPIQGTALPSTPGSVRGLKISSPMLQTTVSSNVKLDSPVTLPSSA # TLASPVMHSPAKGHERAISESSCTFFNHSSPVNPKIPENDDAALSPPLPTTSELQTLLALPLLDEHGQEVMFGDILNDPAAVNSDKAVIVLFIRHFWC # PLDQDYVQEVGDILRRLSKDKDGWQLATSDGELRIGEEGNKAGKKAIPEVIIISNGSHALIAKYKEIFDLEAEKGSNLKVKMYTDPTCRTYGILGMEN # VGEACISVVSTPSTLKHSSTISSPPDSLTSRRGRGGITPYKRCRSPVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g188 ### # start gene g189 Scaffold_2 AUGUSTUS gene 902019 903599 0.95 + . g189 Scaffold_2 AUGUSTUS transcript 902019 903599 0.95 + . g189.t1 Scaffold_2 AUGUSTUS start_codon 902019 902021 . + 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_2 AUGUSTUS CDS 902019 903599 0.95 + 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_2 AUGUSTUS stop_codon 903597 903599 . + 0 transcript_id "g189.t1"; gene_id "g189"; # protein sequence = [MTSPMESYANVYRWVHSPNVLLSCSPSSSSSSLSSLSADKSGSSICDNESELIPHGYRISRSPPLIVPSETNPRPRNL # VEISASSSFTYQTNSSQDVLPTLNNSAASSNPSTASRNGFSSPDAISKPSSSAYSLAAHYGIPQALPRPPRTSPRTLVSQEKPLPDFESLSRNYLSML # ANKPTDNTLSHAAPINNTMSPVHVPAEMPAVSQIEDEEAALKAVVDTLIGTPIPISSCTSADSLDDWFAASPQFQKTGSFNEYLSSPFSTPYDDFNTS # PMDDSPFAPDLSTPIMDAIDEEFGWSGMVGGMDEPIFTDAVSDLYDMLVVAEPAKQVAPVDSVAELLNSKHLYTIPPSTPALESVDSLYPSPRLPSVS # APAEPAPPPIPSSSRKVSYATGTRRNITPDALLPLDAPTQARRYVAPSSTSPKEVSTKKRSRSEAFADDDDEGHEDESKAPGPDATEKEKLEYKRRMS # TIAARKSRRRKLEHKLMLEAKVEALEKDTEKWKTRCKVLQEVLRSHAVDFRFEDDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g189 ### # start gene g190 Scaffold_2 AUGUSTUS gene 906966 907859 0.71 - . g190 Scaffold_2 AUGUSTUS transcript 906966 907859 0.71 - . g190.t1 Scaffold_2 AUGUSTUS stop_codon 906966 906968 . - 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_2 AUGUSTUS CDS 906966 907859 0.71 - 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_2 AUGUSTUS start_codon 907857 907859 . - 0 transcript_id "g190.t1"; gene_id "g190"; # protein sequence = [MCGHATIALGRFLVDTHDSEVFPRRSLLQVQKDDDGQTFTVLRLHAPCGVVTVNVPTTLEDKSDATKPVRFQSVTCFV # SSPKQGVTVEVPLEMAWPKLIKQNKRQIRMDISYGGAFYALVSSAELGFASLRGSNSEFKELAEAARILRSLLNQDSQARRSFVHPNEPDIGFLYGIT # VIDSSISRNGASDQDEKTVTWICFFADEQIDRSPTGSCVSAHVPLAVDQTQLRIGEWCTYQSFISVQFAGNAFRGRAVAHTEMGYVVEIEGFAHYTGT # ATFIPPQNMMDAIGNGFALKLPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g190 ### # start gene g191 Scaffold_2 AUGUSTUS gene 909171 909881 0.75 - . g191 Scaffold_2 AUGUSTUS transcript 909171 909881 0.75 - . g191.t1 Scaffold_2 AUGUSTUS stop_codon 909171 909173 . - 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_2 AUGUSTUS CDS 909171 909881 0.75 - 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_2 AUGUSTUS start_codon 909879 909881 . - 0 transcript_id "g191.t1"; gene_id "g191"; # protein sequence = [MIRVKDGKKYGVLNDWDLAIWLNNRDGISTSQFRTGTRPYMAHEQHSPSWRGPHRYRHDLESLFYVILLLATLFSSPS # ERAYKSLDVDEDHDDDEDDDDEDDDNGKDDKPSETSYHYQTWFTQGDDFIYKDKALIILDLSWQPIPTQFFRDFFHWLMRLQHSLNAGFVALKGHIVR # QRDTPRQIPHFDNDTLNSHFSYDCLVSIMHQFSEEKLETHGREWQEKLREFQKNEDERKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g191 ### # start gene g192 Scaffold_2 AUGUSTUS gene 911617 912078 0.98 - . g192 Scaffold_2 AUGUSTUS transcript 911617 912078 0.98 - . g192.t1 Scaffold_2 AUGUSTUS stop_codon 911617 911619 . - 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_2 AUGUSTUS CDS 911617 912078 0.98 - 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_2 AUGUSTUS start_codon 912076 912078 . - 0 transcript_id "g192.t1"; gene_id "g192"; # protein sequence = [MYQCQDLHPKTIDFPGHLNTADSGFQREDNATPTQPSSGNDPNIQAYLSDTEITRGGSEKVPPVPVTPERKAVTDSTP # AKSTPHSNHSSSFSSTALLNDRQYKVDEANKYLIGDLANVRTLPVKEWSLLSLNLDLDKDTYQLSEQVKKNSKIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g192 ### # start gene g193 Scaffold_2 AUGUSTUS gene 916719 918138 0.2 - . g193 Scaffold_2 AUGUSTUS transcript 916719 918138 0.2 - . g193.t1 Scaffold_2 AUGUSTUS stop_codon 916719 916721 . - 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_2 AUGUSTUS CDS 916719 917230 0.57 - 2 transcript_id "g193.t1"; gene_id "g193"; Scaffold_2 AUGUSTUS CDS 917457 918138 0.2 - 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_2 AUGUSTUS start_codon 918136 918138 . - 0 transcript_id "g193.t1"; gene_id "g193"; # protein sequence = [MWSQVLDPNHNQGSVPENPHSAPHSFANPIAPTPLPSNTNNPATGRGGNDLFVQLEPASTHLTKAFTPQGLLSAGLSD # RQDRSAKRQEEMARESGASLINVPNKPPPPQTGLLGAITGYERERKRDGGVGAALTERERERRMVEERQRRWDEQQRMQMEGGMPGMGQMQMEGGMPG # MGQMQMEGGMPGMGQMPMGQMGMGGPMSMYGGFPGMNPMMSMYGMNPMMMGGMNPQHMFAAQQAAQAYQQAMMAFSVAGSQAGDDNNPSKNPAATPAA # GSSPNLNPMMSGNFDPRMSMMSMGGGMGQGMGMMGQPTPTSQFDPRFSPSNTPPTNSPTNPESTGPFPPGGFGAGLGQGLGAGLGQRIGGRASNSSSP # VRKSSPLARPDNSNNGDGAASKGTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g193 ### # start gene g194 Scaffold_2 AUGUSTUS gene 918325 921947 0.47 - . g194 Scaffold_2 AUGUSTUS transcript 918325 921947 0.47 - . g194.t1 Scaffold_2 AUGUSTUS stop_codon 918325 918327 . - 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_2 AUGUSTUS CDS 918325 921807 0.96 - 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_2 AUGUSTUS CDS 921918 921947 0.47 - 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_2 AUGUSTUS start_codon 921945 921947 . - 0 transcript_id "g194.t1"; gene_id "g194"; # protein sequence = [MGSQRPSELDLLFLDREHAESLDPRDDRTSSIRSRLIGILKERMELGGPPGSAGSAGSGAPITPPGASTLGAGPSGAG # DRTAQQSSSNNSQARPGSSGNSGPLSLPQLPPLSFDSSSAADDVREERALLTPITERSSVYTASVMRSGTIGTIGSGFGPSGSTGGRNSGYGFQGPSP # VLEESDREGTGSVSPKVPEKDFVGMRGMSFSSVGSGGGGRKSVDVPSNVNTTSSTTPASPPPPTRSISPTQGNASGGGTGSPALGMLPHSSFESFSNA # VNTALPKSKPMSPSLSPSLSPSSSTMSPPTNFPNPQNPATATATANPSNSSSSSSSDRPMTPPPPIGGGGASFGLGFRSHSPALSHKSHKSHLSQSGV # SILTSPFSVADHAPGTPGTPVTPGSLSTPATPSASSGPALSKSNPPGGPSPTRNAGFGDRASILTSPYSPMNSPTTSVAPLGNPSSHPPSYTPSHSDP # DVGPYYMDNKDNNNSTDVADYHRHHHRSTLQQQQQQYSQQQYAGDNTGNSAGIRRIPTTIQETESADTSDGDIRDVRELRDFHDDNLQRHGGSNSRDE # QGNGTVNAKSMLGSRTAGDNRGDYNGDTTSQPGSKSSSEDLRRRYEAANSHQSQSQSQTVIPGMQASPVARKGTPMAFMGSSSHSSFYRFSWSRESMN # ANLATPRSIIGSPTFGSRPLSYSPAPLGSPSLNSPSHGSPLASPPNSSSSAGSTAANRVVLGAERGLGRKPSGARAPQRQQHGFSMSAGHVALPPVGV # PEGYDPAAANSNTASSQPRQAQFSSSSSLPPSHHVSGVSEVSEEQDELQEQDDQERLETPEEGSSLEDNSVDYQQYQQQREERRQQQLQQTQIPPRHQ # AYRQQSSTTTATTASSYSAYSTDNNTYNTYSNAGFTAGNTSENNTNDNNVININNAKHAMASQSSSQLHAEDDDVFAVLSYLDVNDPGEEEASGITNA # AKKVEPLSVHRSNANKANNGEEGLPTSNSNLSSSTSSSFQNTPNLSNSQTTNIPGVPSQGSGPQYKSSFAPSKSAAERKAKAQAAQAAQAAAIHRPGG # RAATAPGGFGGGKGGGTRKMRAVPNTNKPGSWSSEEEEEEEEEEDDDDEGDVDSDEAPKVRGKAGSKAGSRENEDGQGQFSQLRPPRTLPQIPGRMGQ # LMCFALILFFSLFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g194 ### # start gene g195 Scaffold_2 AUGUSTUS gene 923133 924299 0.16 - . g195 Scaffold_2 AUGUSTUS transcript 923133 924299 0.16 - . g195.t1 Scaffold_2 AUGUSTUS stop_codon 923133 923135 . - 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_2 AUGUSTUS CDS 923133 924299 0.16 - 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_2 AUGUSTUS start_codon 924297 924299 . - 0 transcript_id "g195.t1"; gene_id "g195"; # protein sequence = [MNNAGGVGVQSSSKWDSRRQSFISPTKLQEIRATTPTHHFTSKPSSPQEESGSGGSSSAASFDNINNTNTGVNRNAQQ # TMFAPSSDQAHPRPVNNASNSNSSQNHSRTSSFFSFRHKQQPSSTSSGVGDAGQRVGPVDDGKVMAASRPSTSSGPQQQQPPDVDAPLHPPPQPSGVP # LPPNTGALASPALPNSPSQPPPPPPLHPEIRSVVGLTVAHAHKIYFSGPLIRRVEREPNGSKPHGPPIWEEVWAQLGGTTLSVWNMKEIQEASKLGKE # VPPSYINMTDAFVQVLGSVTIPATPAQPAQPAKPASGSNPAVPARPAVPAQAAQRYTNVLTLNTAGSNLILFACPHTQSLISWAAALRLSAWEKSRLE # EIYTAHLCRITLSGEY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g195 ### # start gene g196 Scaffold_2 AUGUSTUS gene 933545 934957 0.61 - . g196 Scaffold_2 AUGUSTUS transcript 933545 934957 0.61 - . g196.t1 Scaffold_2 AUGUSTUS stop_codon 933545 933547 . - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_2 AUGUSTUS CDS 933545 933982 0.96 - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_2 AUGUSTUS CDS 934256 934957 0.81 - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_2 AUGUSTUS start_codon 934955 934957 . - 0 transcript_id "g196.t1"; gene_id "g196"; # protein sequence = [MEVYLNTLIADTAQYRSQLNATSRVIIVDESRMTMGIANAFKSTNEPLGVSVGLHPKDQSIIALAVFDAQNKCLVVEF # STQLGLRNNTIGQLGGRPSSPNFDASKVRAMIQEILCQPPGFYAFDLGPLALALYRELGIRVADGIDIQSVFPESRKTPADAISAIIGSDAGIRVDVD # RVVSVFEDLTYYQVDPKFTSRTALVQRAWISQFLAGFESAPEEFQAIRRIDTTTQSDNNLDLTVQNEHGTFIIPGNTGGVVGRRAPLNISRELGSSNQ # VVGKILSKGRDILTNADEKKAAAVLRMLQGEGDFGNIWVTNIWDPPNGTMSWPKSFTHPPPITVPEVPNRPLNSSQIFAIAKMLSLESDNHIILIRGP # PGSGKTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g196 ### # start gene g197 Scaffold_2 AUGUSTUS gene 939974 940678 0.33 + . g197 Scaffold_2 AUGUSTUS transcript 939974 940678 0.33 + . g197.t1 Scaffold_2 AUGUSTUS start_codon 939974 939976 . + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_2 AUGUSTUS CDS 939974 940304 0.4 + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_2 AUGUSTUS CDS 940359 940678 0.76 + 2 transcript_id "g197.t1"; gene_id "g197"; Scaffold_2 AUGUSTUS stop_codon 940676 940678 . + 0 transcript_id "g197.t1"; gene_id "g197"; # protein sequence = [MARKRKAFEDIFGQDKRPAHSPRLPEISDIQVPSSSRPITPVVSFDSSRPSYSPASTNHQRSRDGQRLAFRNFLQQNS # EILACSSTDYGVHTSSTIVQAAPPASDPSTTDGPTADTGNNSAPVSSINLASINSNPQNDDLDYGVSVMAQVILDRDSLEFSPLNMSDLEVVVDAART # TVSTDSFIYLHISFSAFCYIRLRTPFLRIVHLQGSSAIPD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g197 ### # start gene g198 Scaffold_2 AUGUSTUS gene 949665 950144 0.9 + . g198 Scaffold_2 AUGUSTUS transcript 949665 950144 0.9 + . g198.t1 Scaffold_2 AUGUSTUS start_codon 949665 949667 . + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_2 AUGUSTUS CDS 949665 950144 0.9 + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_2 AUGUSTUS stop_codon 950142 950144 . + 0 transcript_id "g198.t1"; gene_id "g198"; # protein sequence = [MSPKRTTPSRTKAAGIATQYRNTSIRGQRAITETHSATLTYNSHSTSSTLNTVFNDGDALASKPPLPVDIDSIHEFPT # IPPGRDEYLERQGGTDELVEGLDTLHAASEKIFKAQKEEIQLRRHQITVLKEQCRVSEWHFVMAHPYKFLSIIRNTRKRSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g198 ### # start gene g199 Scaffold_2 AUGUSTUS gene 966734 967306 0.54 + . g199 Scaffold_2 AUGUSTUS transcript 966734 967306 0.54 + . g199.t1 Scaffold_2 AUGUSTUS start_codon 966734 966736 . + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_2 AUGUSTUS CDS 966734 967306 0.54 + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_2 AUGUSTUS stop_codon 967304 967306 . + 0 transcript_id "g199.t1"; gene_id "g199"; # protein sequence = [MGSKRATASTHPARRSIVRAPSASYAGRHRMITRSKTSRASETDALMTIPLSSISAAEDSSSNLGSNRPSAATLLFSS # IASAIATRNDNPNSPPLSSVSVANATANTDPKVVSPLGSASAPTSSFVANPVLPHVALSDDDCDDNFHGEVRTYLDYTSDLLNAQAEEVKLLRREVAS # ARKEKAVSHDGIQV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g199 ### # start gene g200 Scaffold_2 AUGUSTUS gene 967944 968417 0.71 + . g200 Scaffold_2 AUGUSTUS transcript 967944 968417 0.71 + . g200.t1 Scaffold_2 AUGUSTUS start_codon 967944 967946 . + 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_2 AUGUSTUS CDS 967944 968417 0.71 + 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_2 AUGUSTUS stop_codon 968415 968417 . + 0 transcript_id "g200.t1"; gene_id "g200"; # protein sequence = [MDQPMSDAPATNDSELPLTHDSETPTIARGRRGSRPIDRTMNDSEISSVKPSNRRRRLSSASSEGAQSSSQADDDRPQ # KVTDVSTPSHSMSSCTDLNILLKFKVRVVERVVEREVVPAHLTQQLAEKDEQIQLLQQKLEAEVQSLFVLCSCTLNLSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g200 ### # start gene g201 Scaffold_2 AUGUSTUS gene 975522 976157 0.6 + . g201 Scaffold_2 AUGUSTUS transcript 975522 976157 0.6 + . g201.t1 Scaffold_2 AUGUSTUS start_codon 975522 975524 . + 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_2 AUGUSTUS CDS 975522 975637 0.6 + 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_2 AUGUSTUS CDS 975713 976157 1 + 1 transcript_id "g201.t1"; gene_id "g201"; Scaffold_2 AUGUSTUS stop_codon 976155 976157 . + 0 transcript_id "g201.t1"; gene_id "g201"; # protein sequence = [MMEVPAPLQTEGLTDENPIHLDGVSNADFVQLLTILAPPQRFKDPTPKLTFDEWTSVLKLSDMWCMDVVKEHAISTMN # SLSGVDPVDKVVVARKYGITSWLAPTINAIIQRSQPWNERDVERLGLSTVLKLAEFRDRLQPRSQYGYGFDWELVTQRRETSVDFSGVIMAELPDFQG # MLYPQRIPLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g201 ### # start gene g202 Scaffold_2 AUGUSTUS gene 982877 983665 0.97 + . g202 Scaffold_2 AUGUSTUS transcript 982877 983665 0.97 + . g202.t1 Scaffold_2 AUGUSTUS start_codon 982877 982879 . + 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_2 AUGUSTUS CDS 982877 983665 0.97 + 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_2 AUGUSTUS stop_codon 983663 983665 . + 0 transcript_id "g202.t1"; gene_id "g202"; # protein sequence = [MYQCQHHHPKIIEFPGHLSTASSGFRPEDNDAQAPLSSSSSTNLSIDAYLSDPEIVRGRSEKILPVPVTPERKAISDS # ALAKAQSTPFSHHSSSYSATALSNDKKYKVEEANKYLMGDLANVRTLPVKEWASLSLNLDVDKDTYELTENIKKKFQDYLKAVKNAKNEMDKELYKSL # IALLNELRGNSENIVFYKQDAIPVRGSLVKQTPDIGAVFKELVESRDLLGLPHASDEKIFWGLIHTFVEVKHEDGKMIRDDCELLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g202 ### # start gene g203 Scaffold_2 AUGUSTUS gene 993847 994179 0.44 - . g203 Scaffold_2 AUGUSTUS transcript 993847 994179 0.44 - . g203.t1 Scaffold_2 AUGUSTUS stop_codon 993847 993849 . - 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_2 AUGUSTUS CDS 993847 994179 0.44 - 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_2 AUGUSTUS start_codon 994177 994179 . - 0 transcript_id "g203.t1"; gene_id "g203"; # protein sequence = [MSNSFKIAVSSTDLSALKSRIESATFPDELDDAGWAYGVPLTDMKRLVARWRDGFDWRQEELKLNNELPQFTQDIEVD # GFGSLNVHYVHKKSDRGAGIPLLFVHGCEHYQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g203 ### # start gene g204 Scaffold_2 AUGUSTUS gene 996006 997274 0.45 - . g204 Scaffold_2 AUGUSTUS transcript 996006 997274 0.45 - . g204.t1 Scaffold_2 AUGUSTUS stop_codon 996006 996008 . - 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_2 AUGUSTUS CDS 996006 996455 0.53 - 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_2 AUGUSTUS CDS 996981 997274 0.8 - 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_2 AUGUSTUS start_codon 997272 997274 . - 0 transcript_id "g204.t1"; gene_id "g204"; # protein sequence = [MDTEIEPALELPISSASSTSNASSLLDSDEDEDMSTSSEDDSMDMEEIAMYDEPQMQSTAEPPPLSPEVDMHAAEPTE # SNSVPPSVSAENIGPLRHGSDVLTALDRYPASLRDEIMQYAPKGLDTEHGKGSWDEYVTGRYRETKVRDTRLLGGGKPAVGLSGINSGGRMGDVATKW # KVDEEEMGGIQATVGAASSPTLDNKPINNEMRGEFRRSVSSKPRREGSADFGVAPTTLDDDDDDFVAGHSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g204 ### # start gene g205 Scaffold_2 AUGUSTUS gene 997911 998360 0.56 - . g205 Scaffold_2 AUGUSTUS transcript 997911 998360 0.56 - . g205.t1 Scaffold_2 AUGUSTUS stop_codon 997911 997913 . - 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_2 AUGUSTUS CDS 997911 998360 0.56 - 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_2 AUGUSTUS start_codon 998358 998360 . - 0 transcript_id "g205.t1"; gene_id "g205"; # protein sequence = [MLSPAYPPDIHQVVSDLIKGIISMATPSPGAGLTTNGPAASNTAMSDGGGSGVSSNQFARELAREDSVSKLVAYMLQD # FSTSLSESESTLSPDSVRATHFESASSSSIHAMGVLTELIRKNNSDYFEPYLFHTLRNRLIGVQQAMIQQG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g205 ### # start gene g206 Scaffold_2 AUGUSTUS gene 1002922 1003344 0.78 + . g206 Scaffold_2 AUGUSTUS transcript 1002922 1003344 0.78 + . g206.t1 Scaffold_2 AUGUSTUS start_codon 1002922 1002924 . + 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_2 AUGUSTUS CDS 1002922 1003344 0.78 + 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_2 AUGUSTUS stop_codon 1003342 1003344 . + 0 transcript_id "g206.t1"; gene_id "g206"; # protein sequence = [MTVLVEGSGRIAAYKLDDCIGGPSELLVPHRGYSMSTSTSSNNAAAGPSSKSSKGKRSPSPPTILDAELEKLLSREAS # AFQREVEVERILKAFKLKWVRYVQGTASIPNESSRSPYDILDLDETATQDDIKKKYRQLSLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g206 ### # start gene g207 Scaffold_2 AUGUSTUS gene 1006295 1007899 0.62 + . g207 Scaffold_2 AUGUSTUS transcript 1006295 1007899 0.62 + . g207.t1 Scaffold_2 AUGUSTUS start_codon 1006295 1006297 . + 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_2 AUGUSTUS CDS 1006295 1007899 0.62 + 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_2 AUGUSTUS stop_codon 1007897 1007899 . + 0 transcript_id "g207.t1"; gene_id "g207"; # protein sequence = [MDIEKFNLKWSSTLTTLRNYGYDIPWDTLISKYISKLPSGPRYVYLKQVLEEEFDRMGVIPNRDLFDKFAIRLENTRN # RELLDLADSGGGTYNRRFQRNGNGGTPDKSPELQKPKDQTNLPKPNNKPSAYVTTTNSPALNSTSKIEPVDTVNHVPNVTSNANTTIRSTYPARRLKP # FAALLSSFPSSPVPIPHLQNDEPIACSTIIQRTQTLLDSACTNHIINDRSFFFTFDVDGALAVQTANSGILSTKASGTCYFEMRIEGTTEKLILEMHD # CLYAPDAPVNLLSVGAMLEHGFTFIMSPEMVEIHPDPDRFTVADVVQRLCILRGKFLLPDKDFSDPIPLAMPVFIPRIPNGALFHERFGHPGIDLTNE # LLTGTSAKGLEEWNGTKMRGICDSCLKGKHPRFSYPYHGNRASAPLELIHTDTCGPIGTLSNHGSSHFNIILDDYTSALSGGCFAKKNQALRNIKSTI # STWENIMSPHKVKNIRLDGAKEFHGSEATTYFEEKGILVQKRQLILINKMGRLNDGSVSSKTMP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g207 ### # start gene g208 Scaffold_2 AUGUSTUS gene 1014204 1015100 0.62 - . g208 Scaffold_2 AUGUSTUS transcript 1014204 1015100 0.62 - . g208.t1 Scaffold_2 AUGUSTUS stop_codon 1014204 1014206 . - 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_2 AUGUSTUS CDS 1014204 1015100 0.62 - 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_2 AUGUSTUS start_codon 1015098 1015100 . - 0 transcript_id "g208.t1"; gene_id "g208"; # protein sequence = [MISGNRSSLADSEVKAHLLPSVLPNPIDARVQRVRRSESFYNPPYSASNDNHPFVASARTPPSTRQAFKRAPSYGALV # QEAREREKEKRSNGAVPHIYGSKSREEMNVSPCPSSDEEEKLRNNQAKKVKGPGGKASRSPAASLPPDSPSSDQGKAKKRTKAKDAVCSESKATSSRL # KSPPPASISAVVPTQPLGRPGPQMNLQHSSIFGEELPHLHIPAAPSRPIPSASSSSCNPRHTATPSQPAGPPRKTLRRVKRLAPSRKISFGSLVAPNG # NDTDVEEDDKGGQHPKLGSAFQLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g208 ### # start gene g209 Scaffold_2 AUGUSTUS gene 1021117 1021617 0.33 + . g209 Scaffold_2 AUGUSTUS transcript 1021117 1021617 0.33 + . g209.t1 Scaffold_2 AUGUSTUS start_codon 1021117 1021119 . + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_2 AUGUSTUS CDS 1021117 1021617 0.33 + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_2 AUGUSTUS stop_codon 1021615 1021617 . + 0 transcript_id "g209.t1"; gene_id "g209"; # protein sequence = [MDISFARQRMFYARPNFTPSRYIVVGLPLNRKDQTWYNPPKLTDIVDVLNRLQLSFGSKIVQDPDVHAQAEKSRRFSK # YVFPRQYGLANASMFEVSKYEPSYIPDFADRDSEIEVITLSLEIIQCDLNIFTDAGSMQDSKESKGGFTTFGKVNMEAREVQVSIVTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g209 ### # start gene g210 Scaffold_2 AUGUSTUS gene 1025494 1025753 0.72 + . g210 Scaffold_2 AUGUSTUS transcript 1025494 1025753 0.72 + . g210.t1 Scaffold_2 AUGUSTUS start_codon 1025494 1025496 . + 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_2 AUGUSTUS CDS 1025494 1025589 0.73 + 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_2 AUGUSTUS CDS 1025673 1025753 0.72 + 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_2 AUGUSTUS stop_codon 1025751 1025753 . + 0 transcript_id "g210.t1"; gene_id "g210"; # protein sequence = [MKKSEVNGDNTNEVYQFLKSQKSGILGLTRIKGNVVNRWASTTTPQAIDGDIAKLVAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g210 ### # start gene g211 Scaffold_2 AUGUSTUS gene 1028578 1029120 0.58 + . g211 Scaffold_2 AUGUSTUS transcript 1028578 1029120 0.58 + . g211.t1 Scaffold_2 AUGUSTUS start_codon 1028578 1028580 . + 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_2 AUGUSTUS CDS 1028578 1029120 0.58 + 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_2 AUGUSTUS stop_codon 1029118 1029120 . + 0 transcript_id "g211.t1"; gene_id "g211"; # protein sequence = [MVEFVEKPFEWVKAEIEKGTQKPSFCSTLLENSDAVVPSAVTNGHMKRKSDISPELLSSWALASSAVAKPVTANAKEY # AQFEFDLKWTANSMYSASGDTTVTTVMHYFLAILQDMDTGGEVVRKARKELDLVTGLGRSNCQISSVDLIPDIPVFTPFHSGRLPSSNQTPSSKFIGS # IRRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g211 ### # start gene g212 Scaffold_2 AUGUSTUS gene 1032095 1032745 0.51 + . g212 Scaffold_2 AUGUSTUS transcript 1032095 1032745 0.51 + . g212.t1 Scaffold_2 AUGUSTUS start_codon 1032095 1032097 . + 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_2 AUGUSTUS CDS 1032095 1032745 0.51 + 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_2 AUGUSTUS stop_codon 1032743 1032745 . + 0 transcript_id "g212.t1"; gene_id "g212"; # protein sequence = [MVWPKPIVSWEGEIMDPEGLDLPNAKSQICMDNAWNGGSSLRLSLVAFGTESENAAFRCIWIPVQSLATSVGRMYEAS # AVYKLETDVAGVDIDVALSIKGSESSPTTRYPKFDIESLPSEDMDLGRGWSLLKIRFNLGNSIIGDVNRLSSMGLVITIVSEETTQPLAFSLLLGQLN # VYPSIPSSIPPHVTSLLWAHFLLRNQKQRPFQTCQRPSAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g212 ### # start gene g213 Scaffold_2 AUGUSTUS gene 1033515 1034529 0.1 - . g213 Scaffold_2 AUGUSTUS transcript 1033515 1034529 0.1 - . g213.t1 Scaffold_2 AUGUSTUS stop_codon 1033515 1033517 . - 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_2 AUGUSTUS CDS 1033515 1033913 0.7 - 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_2 AUGUSTUS CDS 1034320 1034529 0.11 - 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_2 AUGUSTUS start_codon 1034527 1034529 . - 0 transcript_id "g213.t1"; gene_id "g213"; # protein sequence = [MSILVNDLAAKKVMLAGIDDATKEIHQNVLELFNEFISLNDWGNARDVKTLAKKMIEKTFVRNVTIGDSLEANKVRAQ # KKLDAAIKAAVDAAKKAAEERRRVQALAEKIKKEQDRLKKEELERQRKEQLIKEKEAIRRRKEKEERLKAEKEAQERAKRKEEEAQKKLQQMGVCVAG # FRWIPCGTGYRCAGGYHFVSNSELQL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g213 ### # start gene g214 Scaffold_2 AUGUSTUS gene 1035940 1036623 0.73 - . g214 Scaffold_2 AUGUSTUS transcript 1035940 1036623 0.73 - . g214.t1 Scaffold_2 AUGUSTUS stop_codon 1035940 1035942 . - 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_2 AUGUSTUS CDS 1035940 1036623 0.73 - 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_2 AUGUSTUS start_codon 1036621 1036623 . - 0 transcript_id "g214.t1"; gene_id "g214"; # protein sequence = [MENNIGRLVFILAGYNKQMEKFFEHNPGIPSRVPHTFNFHDYSDDELRLMFERKLHEKFDGRLKVEAGVHGLYGRIAI # RRLGRGRGREGFGNARALENLVSIILKRQASRVTKERTSGTRPDYLQLVKEDLIGPDPATAILQCGSWTKLQELTGLNSVKRSIEGLYDIIWRNYARE # LNEEEPLQMTLNKCFIGSPGTGKTTVAKLYGQILVDLGLLSNGEGEYLMNC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g214 ### # start gene g215 Scaffold_2 AUGUSTUS gene 1036892 1037440 1 - . g215 Scaffold_2 AUGUSTUS transcript 1036892 1037440 1 - . g215.t1 Scaffold_2 AUGUSTUS stop_codon 1036892 1036894 . - 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_2 AUGUSTUS CDS 1036892 1037440 1 - 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_2 AUGUSTUS start_codon 1037438 1037440 . - 0 transcript_id "g215.t1"; gene_id "g215"; # protein sequence = [MQLKELEQKISEQQELARDAQSKRQRDNELQQKAADVEEAKTLTQRAISLAQQIRQQVFPTFTTASTDPLKSPQPPTQ # RATTSSDTTQRLPAVLTSPSSNSKLSSESEDRWQYKKNIEGVNNQAVDAIMKMTGLEKVKSEVLKILDSIEVKQRQGARYDDERYNVAFLGNPGTGIY # HLIDAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g215 ### # start gene g216 Scaffold_2 AUGUSTUS gene 1038754 1039437 0.93 - . g216 Scaffold_2 AUGUSTUS transcript 1038754 1039437 0.93 - . g216.t1 Scaffold_2 AUGUSTUS stop_codon 1038754 1038756 . - 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_2 AUGUSTUS CDS 1038754 1039437 0.93 - 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_2 AUGUSTUS start_codon 1039435 1039437 . - 0 transcript_id "g216.t1"; gene_id "g216"; # protein sequence = [MLLRNQPRSYRFSKGDNSIITQLKADGELRGLGLQRSFDSFIQSSVGDADLLVHIEFEEPEFFEAFSVPVSEDGMATV # GKGGRAVNEFYLVNRWRQGQDAGVFQRQQNVLNSTHIWNIPKVDRKALEDKWVQEILTEKIDTLYKQARRYDKTQIELEQKFRERDIAVLKSKRIIGC # TTTAAAKYASDLHEVGINVLLVEEAGEILESHVITALSSSIEQVILIGDHK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g216 ### # start gene g217 Scaffold_2 AUGUSTUS gene 1040319 1041179 0.99 - . g217 Scaffold_2 AUGUSTUS transcript 1040319 1041179 0.99 - . g217.t1 Scaffold_2 AUGUSTUS stop_codon 1040319 1040321 . - 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_2 AUGUSTUS CDS 1040319 1041179 0.99 - 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_2 AUGUSTUS start_codon 1041177 1041179 . - 0 transcript_id "g217.t1"; gene_id "g217"; # protein sequence = [MADQNRVAKLDKLLGNVLNGKATISTATQSKQFIEAICAQADHAGCVDRIIAAGQQGLGAIQASLRTDLSSAFFDGPA # TTLLTYLQDPTIKAISGGRFLEKILQAIVDPPIFWTPFVEAFRNRGLSEPTQKCFSWLLLQLMKSSTDATSPYLPIALDVEPLMAKSHILDVRNFSAG # IRNVISVLSAPPTTTSTTQEDHPPGGRHDNDFKDFRAIAIVPTSDEIACATSPFLRVSSALDDPDTEEFREAIYLDHFFRLTREEMINEMREELQLAL # GNSLGRTVVGSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g217 ### # start gene g218 Scaffold_2 AUGUSTUS gene 1048476 1050454 0.62 - . g218 Scaffold_2 AUGUSTUS transcript 1048476 1050454 0.62 - . g218.t1 Scaffold_2 AUGUSTUS stop_codon 1048476 1048478 . - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_2 AUGUSTUS CDS 1048476 1049196 0.92 - 1 transcript_id "g218.t1"; gene_id "g218"; Scaffold_2 AUGUSTUS CDS 1049453 1049600 0.72 - 2 transcript_id "g218.t1"; gene_id "g218"; Scaffold_2 AUGUSTUS CDS 1049702 1049879 0.86 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_2 AUGUSTUS CDS 1050347 1050454 1 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_2 AUGUSTUS start_codon 1050452 1050454 . - 0 transcript_id "g218.t1"; gene_id "g218"; # protein sequence = [MIPKGDEEVPEEEEPQQQDDDDVVHETMFTFEAFEMAFFPKNRGNWKQYSSWEPPPKGGKSKGVEDIRFPQEVQVKKG # YSWSDQVGITIASLVEAAKAERERIIEEVDKKGGNDSDEDVDDTDTQSKLLGPSVDAQAKLTDYREFIITVITQFLETPFDLEGKKASQLMSKKSRRR # RRVKAPESDANEDEDEPRQQKKKEKKKKEEVQYKSAQFIEDSDAEYGDIDSFLELEKKRREKTESAATALGEGRSGAMKSTGTKKRRRKAGDTGKSGT # GKKKRKGAEDAVEIAPADNSESSSEDESETHGRTNDEEERVAKGGTAEATIEKPRPRPRPKPKAPPLDDSMIQSFSLSQADGEDQAESGFPPTKAGSR # KKGRLIISDEDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g218 ### # start gene g219 Scaffold_2 AUGUSTUS gene 1051606 1052508 0.62 - . g219 Scaffold_2 AUGUSTUS transcript 1051606 1052508 0.62 - . g219.t1 Scaffold_2 AUGUSTUS stop_codon 1051606 1051608 . - 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_2 AUGUSTUS CDS 1051606 1052508 0.62 - 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_2 AUGUSTUS start_codon 1052506 1052508 . - 0 transcript_id "g219.t1"; gene_id "g219"; # protein sequence = [MDENEIIDISSDESENGSAGDTDGKREFLEHIVQGVVDALGGYEENVYRMGDQVNGCLKDLKKLWRKDETDDDRTVAR # IFWKTRVLPNDLVPILLATAGQGLVEDKRAIACADLMTAMTWPIDLAEELKELDDQLDSKADYTELLQSHLHYKAAVLKPGVLEALFGIVLPPLTKGP # QERTERDGQIVNVVLHLVRNLAFIKDLPANTFLSADHAEFSSMQSKLIRMLSDSHILQLVLTIAANSDNDPLFDSWNTIVLEIIYLSLRGVQPSSLSM # DQSKVCIIALLTIRYHKLATCILAPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g219 ### # start gene g220 Scaffold_2 AUGUSTUS gene 1056328 1057416 0.77 + . g220 Scaffold_2 AUGUSTUS transcript 1056328 1057416 0.77 + . g220.t1 Scaffold_2 AUGUSTUS start_codon 1056328 1056330 . + 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_2 AUGUSTUS CDS 1056328 1056476 0.78 + 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_2 AUGUSTUS CDS 1056528 1057416 0.85 + 1 transcript_id "g220.t1"; gene_id "g220"; Scaffold_2 AUGUSTUS stop_codon 1057414 1057416 . + 0 transcript_id "g220.t1"; gene_id "g220"; # protein sequence = [MSFAGTPLGQGRRLDHQTFLGKPPSSNGSTGNNNPQTQRITPVPTSYSSGAPPLGSRSPPKPSSSRERVDTTNLNPEK # WSVRDTSVNAASAIYQAMSNPNTAWASSSRTARTSNPPRSTSVEYESQASNNARRLGAPPSRLGSKTNNKPLSMNSSSRSIVPDSEGEQSQSQILDYS # REKSPFSFDQLTNLAQTAIQKTSYFVREKQREDQQPNGNASYDYSAEEREYQQYERNVNANASSSKNLSSSAVHRKNRISTDNKAYKPSQEELEESSD # DDVSDTRRRRRKKGASGPAGGPLTTLPKVGPEKRRKKGSRKTKGGAANGEEEDEEEETDKEQVKPKSTSYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g220 ### # start gene g221 Scaffold_2 AUGUSTUS gene 1058116 1059513 0.88 + . g221 Scaffold_2 AUGUSTUS transcript 1058116 1059513 0.88 + . g221.t1 Scaffold_2 AUGUSTUS start_codon 1058116 1058118 . + 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_2 AUGUSTUS CDS 1058116 1059513 0.88 + 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_2 AUGUSTUS stop_codon 1059511 1059513 . + 0 transcript_id "g221.t1"; gene_id "g221"; # protein sequence = [MTEEEVKEYEKERAKEAKEKEREQVTERQRERSRMQQQAIEREKDRERATQQGKSEPVEIKEIVGRLGALEGLVKTDI # SGRVSKVEDVVGGFNRIQERKEKEERERQARLAVEAKEAREAREREERFKERLERDVREREQKERERDQREREKENQRQKEEKERQQREERERLVLNQ # VKKEMESLKSVIGALQSQPSSGGSDIEARTQLALLEERIGSIEGGVKEALDLGNNALKTIKSSSQHPDSQSNWWSKISPSSSSKSGLTIKSTDGQDVT # SLLTHLVSSAVSSAISMHSKDSIARADYALHSGGARVIPSLTSDTFALRTPSTFTSQLLGLIPFSGSGFGFGGPGSVAVGRPPVWALHPDITNGLCWP # FPGSHGQLGIALAAPVVVDSVTIDHVAAETAYEDGLVEVEEEGQDGDEDVEDGHVDKTNRRRSKRRSAPREMEVWGLVEGRENIHKVKEWRKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g221 ### # start gene g222 Scaffold_2 AUGUSTUS gene 1062467 1062979 0.58 - . g222 Scaffold_2 AUGUSTUS transcript 1062467 1062979 0.58 - . g222.t1 Scaffold_2 AUGUSTUS stop_codon 1062467 1062469 . - 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_2 AUGUSTUS CDS 1062467 1062979 0.58 - 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_2 AUGUSTUS start_codon 1062977 1062979 . - 0 transcript_id "g222.t1"; gene_id "g222"; # protein sequence = [MNVAKQHHKALMADRSLPIAKALEPLMSVAQMTLTNFDKVFLSQVGGPPPQFPYATVNEYYNAMSSHECVGGITIPYL # AINSADDPVVQYVPMHGAGNGFAVMVLTSGGGHLGWFNDSSGKDRWTTKPVLEWLQLMGEGVVCQAGGERGHKIILWEDGFLRNEGGNDDLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g222 ### # start gene g223 Scaffold_2 AUGUSTUS gene 1074784 1075518 0.2 - . g223 Scaffold_2 AUGUSTUS transcript 1074784 1075518 0.2 - . g223.t1 Scaffold_2 AUGUSTUS stop_codon 1074784 1074786 . - 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_2 AUGUSTUS CDS 1074784 1075176 0.83 - 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_2 AUGUSTUS CDS 1075259 1075293 0.65 - 2 transcript_id "g223.t1"; gene_id "g223"; Scaffold_2 AUGUSTUS CDS 1075497 1075518 0.21 - 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_2 AUGUSTUS start_codon 1075516 1075518 . - 0 transcript_id "g223.t1"; gene_id "g223"; # protein sequence = [MCKDVADHTQYLPNSSHCRVDGSSAENVENVETIETIEQIEDEIAGNHDGSGGSNGEGDGTKSKKSPPVEGQGKLIVA # EEIQIGNVGWPAGLCFSNSHFHTLITFISSAIAHKRARRTTRYPIRRLRVRQFPTLGVGRDLPDMVSWYLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g223 ### # start gene g224 Scaffold_2 AUGUSTUS gene 1075910 1079316 0.04 - . g224 Scaffold_2 AUGUSTUS transcript 1075910 1079316 0.04 - . g224.t1 Scaffold_2 AUGUSTUS stop_codon 1075910 1075912 . - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS CDS 1075910 1076371 0.77 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS CDS 1077372 1077806 0.14 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS CDS 1078621 1078746 1 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS CDS 1078912 1079106 0.66 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS CDS 1079263 1079316 0.44 - 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_2 AUGUSTUS start_codon 1079314 1079316 . - 0 transcript_id "g224.t1"; gene_id "g224"; # protein sequence = [MGSQQMSFMYSQGESLRMTKSARPDASSRDSPSLRRQITTLGGSTIFAFYFVRLLSCVALVVIGTIELVRSRSSVDTA # LIFIFGCISAWEIQGCATGWLRWKLHVGQNWVVVSSRSSSSAVRSKKTDDEDDQRASEAISSNYPSASASPSQSESDSSTPPDSGDEEDQRTLQSDTH # SRAATNATEATDATDTTLRPGSSSSSKVIKSKEPSKVSALALTTDSSKNPKSQKIKSEKAKNILGKLSNLVTTDMQNITDGKEALRLIIQVPIQTELL # DTFQTHPHTTGSAASDELGIPVTAPPPPFPTQEIGFRNVTFSWSNDYSGHSDEYQSGLSTPTSTRSEPFEPSISSSITPTSQSPRSIKRQFTLKIPDE # VIFQRNTINLIVGSTGSGKTSMLMALLGEMHFIPHNSVFTNHGSIYQEEEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g224 ### # start gene g225 Scaffold_2 AUGUSTUS gene 1081590 1082135 0.76 - . g225 Scaffold_2 AUGUSTUS transcript 1081590 1082135 0.76 - . g225.t1 Scaffold_2 AUGUSTUS stop_codon 1081590 1081592 . - 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_2 AUGUSTUS CDS 1081590 1082135 0.76 - 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_2 AUGUSTUS start_codon 1082133 1082135 . - 0 transcript_id "g225.t1"; gene_id "g225"; # protein sequence = [MSASEGTDQVTPISNEYKMLSTPSSSLIAMITLPESPNSYLCASLVIIFQVNPASVLKNVSQSSYGSSVFPIEPTPMT # IPGAGDEKILPKLCGAVTDQRWRPQSSSPGLQLTRAPLESYEGGFIGDQFASIVKSHYAFEKLGSTSSFDFLCIGYNIGNAHTINTKKLFKIHKTHVV # PIRIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g225 ### # start gene g226 Scaffold_2 AUGUSTUS gene 1097805 1098261 0.43 + . g226 Scaffold_2 AUGUSTUS transcript 1097805 1098261 0.43 + . g226.t1 Scaffold_2 AUGUSTUS start_codon 1097805 1097807 . + 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_2 AUGUSTUS CDS 1097805 1097855 0.43 + 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_2 AUGUSTUS CDS 1097932 1098261 0.72 + 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_2 AUGUSTUS stop_codon 1098259 1098261 . + 0 transcript_id "g226.t1"; gene_id "g226"; # protein sequence = [MTEVPAGSSFNVTIAQGQLENIAIVIALLNCHEYSSTCLGPAEELGTILYSGPFNPQFTTEPGTAELPPHENFTLTVP # SDFETGQSQLGVALFDLVGVRTITWIENISSDEHVIPSGIAVSLPSNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g226 ### # start gene g227 Scaffold_2 AUGUSTUS gene 1099378 1100046 0.95 + . g227 Scaffold_2 AUGUSTUS transcript 1099378 1100046 0.95 + . g227.t1 Scaffold_2 AUGUSTUS start_codon 1099378 1099380 . + 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_2 AUGUSTUS CDS 1099378 1100046 0.95 + 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_2 AUGUSTUS stop_codon 1100044 1100046 . + 0 transcript_id "g227.t1"; gene_id "g227"; # protein sequence = [MIETKLELVFLQRYQSNTTSTPTTPSEHRWSDVIPPKTALKFAVVWDSDDLVVFSGGELLEDSRTEELLLGSPLSPSD # ACSQAFSVGQSTMPLSDKSSTMLYFRDNMGSVLTENHPPPTSDSEKRMIWGRTQTSSTLEGLDVYLRGSLMGQAHRNNRYYSCLDNLDGQFEFDPRTS # FAKEYLRKVESKDIVDDAVTDEGFFEVEIAPRQHQILAKPSSRVRT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g227 ### # start gene g228 Scaffold_2 AUGUSTUS gene 1103082 1103381 0.37 - . g228 Scaffold_2 AUGUSTUS transcript 1103082 1103381 0.37 - . g228.t1 Scaffold_2 AUGUSTUS stop_codon 1103082 1103084 . - 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_2 AUGUSTUS CDS 1103082 1103381 0.37 - 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_2 AUGUSTUS start_codon 1103379 1103381 . - 0 transcript_id "g228.t1"; gene_id "g228"; # protein sequence = [MPDIASMSAECTLESSNTGGCVYIGLADVDGTSLVTVTETGLPVSFYEVPISAATGSSVDSPSSSPTTTAKADNGATL # NQQISLLGSITVGLLGTCLIW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g228 ### # start gene g229 Scaffold_2 AUGUSTUS gene 1106558 1108066 0.98 - . g229 Scaffold_2 AUGUSTUS transcript 1106558 1108066 0.98 - . g229.t1 Scaffold_2 AUGUSTUS stop_codon 1106558 1106560 . - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_2 AUGUSTUS CDS 1106558 1108066 0.98 - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_2 AUGUSTUS start_codon 1108064 1108066 . - 0 transcript_id "g229.t1"; gene_id "g229"; # protein sequence = [MNIFASTSSDKGRTPTSNNVISSFIRRATSPLRSFESPPGPSIFPSISKKNTQESTLSRSSSRKNLNSGHSHSYMHSI # PDPHLLSPPTSPTRPVHTPSQRTAAKGSSSPVKFSSSSFKSSTQTSLSAMSNHDIFEDGGLFTSADIRRAISDLDEDAKNVLRAFDELEESALKRTKS # KNHSSRSHSAAPPSSFSLNLLSAPTMQHRSRSDSAATATVSGRSSASADDSLSRSGHPRLRSQSTTSIQPMTRLDPPHKSNSNLGTPHSTSSRTPTLH # RKGSVSSLASSIFSLKAKASMPSLPSLPSIPSISTMPSITRSRSGSVASSTTSSNPSNSVFSSSGKSVEGMPSMSTEWSSFGQGRSSTSTGASSIHTT # TSTSSTGRTSLSSGHGHTSSVTAAPPVHRSRSTSEFSSSNSSVQFRGNSTNSGRAGPSGHSKYRSGERERGRTKGDQDGLDDLDELDELGEIHQIQQR # KRDVIGRYDARREYLKARLRGAELHEKVVKGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g229 ### # start gene g230 Scaffold_2 AUGUSTUS gene 1109922 1110581 0.51 + . g230 Scaffold_2 AUGUSTUS transcript 1109922 1110581 0.51 + . g230.t1 Scaffold_2 AUGUSTUS start_codon 1109922 1109924 . + 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_2 AUGUSTUS CDS 1109922 1110581 0.51 + 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_2 AUGUSTUS stop_codon 1110579 1110581 . + 0 transcript_id "g230.t1"; gene_id "g230"; # protein sequence = [MPVTEFATLEVLDSSNPSLITQPPLIDHLRLVAEKQSAVSGYPVLFFESLSPDSKSIFYLISGWTSVAAHYEWIHSQT # NQELLVLLKDIVGVKGLAHVSVDFDEMRCELEKDCGAILRPEAEGDLQDSQTSSGSRNGILAVSCSKDAMLEQMHSFRKSSWTKEGFSLDEDDESKRM # VYRFAWFATNCLEDVVATLTEGGENSRVILMAHSSCHMDKENV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g230 ### # start gene g231 Scaffold_2 AUGUSTUS gene 1111331 1112017 0.84 - . g231 Scaffold_2 AUGUSTUS transcript 1111331 1112017 0.84 - . g231.t1 Scaffold_2 AUGUSTUS stop_codon 1111331 1111333 . - 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_2 AUGUSTUS CDS 1111331 1112017 0.84 - 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_2 AUGUSTUS start_codon 1112015 1112017 . - 0 transcript_id "g231.t1"; gene_id "g231"; # protein sequence = [MFTTLVTVTLFAAAAINGAAAQLNIQTPSMTTVLLKVFTAYCLDSLPFVQCEPVDITWSSTTGPYNLIMVSPDDPCGD # ALYGKNHSIRNSFPKKSSFFLLSVDLGDQDGTSVSWTPNVAPGTQLELSLVDANDDEAWSGTVWTFNDLYRVPLELMNVIYFQITVAQGSDTSCVPAD # ALAAASSSSVAAASSSVSSSSADASSAVSSISASVAVTGTTYVYITTMLATV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g231 ### # start gene g232 Scaffold_2 AUGUSTUS gene 1117255 1117605 0.81 + . g232 Scaffold_2 AUGUSTUS transcript 1117255 1117605 0.81 + . g232.t1 Scaffold_2 AUGUSTUS start_codon 1117255 1117257 . + 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_2 AUGUSTUS CDS 1117255 1117605 0.81 + 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_2 AUGUSTUS stop_codon 1117603 1117605 . + 0 transcript_id "g232.t1"; gene_id "g232"; # protein sequence = [MEEIIDDDHAIISTASGPEFYVSIMSYVDKDLLEPGCQVLLHHKTQSIVGVLQDDADPMVSVMKLDKAPTESYADIGG # LETQIQEIKVCILCLDFYHVSESRIGICRATSNASRVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g232 ### # start gene g233 Scaffold_2 AUGUSTUS gene 1124356 1126143 0.61 + . g233 Scaffold_2 AUGUSTUS transcript 1124356 1126143 0.61 + . g233.t1 Scaffold_2 AUGUSTUS start_codon 1124356 1124358 . + 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_2 AUGUSTUS CDS 1124356 1126143 0.61 + 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_2 AUGUSTUS stop_codon 1126141 1126143 . + 0 transcript_id "g233.t1"; gene_id "g233"; # protein sequence = [MTPAQSQANRSLPGSRAHSVDSTSFHTPAAVTSTATANVHQCLSRQERASTGANSHSRGCCCDSKFTCLQRAVFSPFS # LALPQRRSRVDFSRDQSRGRSTYKGKERTNTLSSSTDDSMGTASTATSNRNSSSRLADTLSSVWGCGISYCQINSRVTQVKRGYPFVVSDQRELREIL # HSPPAPLPEPAPSAPVEEAPMSAVDMPGAFGTGVPAAEAELAQAEPSPTAAEYLEAAAWGSFTSAGEATGANMGPTNLRISTALSNRAPSAVISPINL # PEMNMDLATQPIIDAGSTDGMLSLSNEAFLASDESSDLLSGPPESAPSNTNNLADLLGTVSSEVKSPTKASPKPASSPNPPNPTTPAAEVPPTSSKSP # WGTPKPAGTPRAASKLGSKIPSRVATPLTATTPKPAATPKAATPVPASSPKPETSELPPPTSELVEPVAVESQEPTVENAVPDPTTQQTTETPAENTV # PSAPEHPSEPDATAALANIPPTETPEPAEVPAEPAVEATAETTQPSNAVTEETAAPETTVAATPDESTPGTAPGTAPGTPGDGLNGADIEGEAEEGDD # KDTKEEEATTPGGKKKKNEKKKKKKGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g233 ### # start gene g234 Scaffold_2 AUGUSTUS gene 1127390 1127881 0.81 + . g234 Scaffold_2 AUGUSTUS transcript 1127390 1127881 0.81 + . g234.t1 Scaffold_2 AUGUSTUS start_codon 1127390 1127392 . + 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_2 AUGUSTUS CDS 1127390 1127881 0.81 + 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_2 AUGUSTUS stop_codon 1127879 1127881 . + 0 transcript_id "g234.t1"; gene_id "g234"; # protein sequence = [MVDILKNAWGEKLVEGKLTDDSEQEVKVSPRELKGRIILMVRSFHSDLLYLISSQVEYYAPSNFAEVEAEEELEELDP # DQEEESTTSDSIVEGEDLPQVLVGEIERGKISDELAALGYYARSWKPTKGWLQQGIFLSQTQFSPFFTFHRTYRSSSYPHQHLRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g234 ### # start gene g235 Scaffold_2 AUGUSTUS gene 1135750 1136937 0.91 + . g235 Scaffold_2 AUGUSTUS transcript 1135750 1136937 0.91 + . g235.t1 Scaffold_2 AUGUSTUS start_codon 1135750 1135752 . + 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_2 AUGUSTUS CDS 1135750 1136937 0.91 + 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_2 AUGUSTUS stop_codon 1136935 1136937 . + 0 transcript_id "g235.t1"; gene_id "g235"; # protein sequence = [MIPKRASSASTCIKCGQWPDFRRSHDCGLISTSFFSSTMSKLNPQTTHYEFLGPVGTFFISVGVPSMIYGLYYGCSEQ # TGGCPPPTLTLSKLTSELIALPVTISLHDISWWQGLWQEVWDTEAALMYLAWYAFCVVAWRVLPGAQVEGTRIRDGSVKKYKINAFSTFLLALGLVTG # VIIRFGPEKFTFLYERWVGFATAAILMSIVQAFVVYAMSFREGALLALGGNTGNWVYDWYIGRQLNPTLSIFGAEFDIKSFNELRPGLILWALIDISM # VCEQAVRRGGIGNVTDSMWLVLLFQIGYVADGLYNEPAILTTMDITTDGFGFMLSVGDLAWGVYALPIQLLFDSLYIPPMFFKSPIRILPSSALSCFP # SDPSRTCRYSADRCRQRYWLLHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g235 ### # start gene g236 Scaffold_2 AUGUSTUS gene 1138153 1138749 0.81 - . g236 Scaffold_2 AUGUSTUS transcript 1138153 1138749 0.81 - . g236.t1 Scaffold_2 AUGUSTUS stop_codon 1138153 1138155 . - 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_2 AUGUSTUS CDS 1138153 1138749 0.81 - 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_2 AUGUSTUS start_codon 1138747 1138749 . - 0 transcript_id "g236.t1"; gene_id "g236"; # protein sequence = [MTSEEIREKRRADRKQFKLDRAAAIAKVAAEAETIFETEGRVVVPALFGPEIPSGATWKPKTAESELALEQESGSPEN # AKSKGEDEGEGEEEEEPLEDMEHLQLTLPEAFFLAWNFDCLTILDPETACYVFYFVFQYLKFDSSFTRTNLYRYQKYGLLSNKFTSHPRYQPSPHPSF # NSTTLSLSIMLCTTTIDLLAGW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g236 ### # start gene g237 Scaffold_2 AUGUSTUS gene 1143258 1144082 0.96 - . g237 Scaffold_2 AUGUSTUS transcript 1143258 1144082 0.96 - . g237.t1 Scaffold_2 AUGUSTUS stop_codon 1143258 1143260 . - 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_2 AUGUSTUS CDS 1143258 1144082 0.96 - 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_2 AUGUSTUS start_codon 1144080 1144082 . - 0 transcript_id "g237.t1"; gene_id "g237"; # protein sequence = [MTVASSYFSSSSSSSSSTSPAVTTSTPLPFISYFASTTPDSPSKRARLKTLLFLQVSGLYDVSVVKERILSASDKHIK # TAKGKHKPLLSLELAVLESKLGNHRAVLECLVREVGDAVSAEAYCTGNNGPGSNGERQVIPTRLCRSIAENTEGLSNWKGVVIATSKDASEEKGVSNG # TLLRMLLEVYMSIGDAEKQPSGRIDQEQVQQVQVARLLNSQGVHLDVCDVSNLSFPLSPVLIPSHPQSGDSNASLILAITSTLLLHYAVMSAHVTYFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g237 ### # start gene g238 Scaffold_2 AUGUSTUS gene 1145858 1146673 1 - . g238 Scaffold_2 AUGUSTUS transcript 1145858 1146673 1 - . g238.t1 Scaffold_2 AUGUSTUS stop_codon 1145858 1145860 . - 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_2 AUGUSTUS CDS 1145858 1146673 1 - 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_2 AUGUSTUS start_codon 1146671 1146673 . - 0 transcript_id "g238.t1"; gene_id "g238"; # protein sequence = [MPRLPELDVDPAVQAVLLAPPVPNTGNVRSPLREISPPPSPTLVGSAHPHSDDEDQPRRRRIPNASASTANRGNTLPH # NDVISSALFKETVPNQRASSSINAVRQALPLSPAVRGPIVIESDDEDENTTWESRNRPMRPIPARARSSTSSAKPPSPSAGKGKEKATESDYDDDMFE # ELPSSFYDEIDKVELAVGMKSLSTASVVSTSTGRGSTTDHSASFSVVHSEVITVEDDDEDDKENVPAPTRHVRQRRGVPPIMVATDDILELSDSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g238 ### # start gene g239 Scaffold_2 AUGUSTUS gene 1147022 1147345 0.95 - . g239 Scaffold_2 AUGUSTUS transcript 1147022 1147345 0.95 - . g239.t1 Scaffold_2 AUGUSTUS stop_codon 1147022 1147024 . - 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_2 AUGUSTUS CDS 1147022 1147345 0.95 - 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_2 AUGUSTUS start_codon 1147343 1147345 . - 0 transcript_id "g239.t1"; gene_id "g239"; # protein sequence = [MNPATDMQRIIEEVEVQLLESDLRDSMLHGTGIPNNVANINTAYSKLTGPPILVQIEAITDVGVSAYSLHKTRLIREE # RRDAGEEQEGEADGEVEVKGQSQIIPVQC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g239 ### # start gene g240 Scaffold_2 AUGUSTUS gene 1147660 1148743 0.39 + . g240 Scaffold_2 AUGUSTUS transcript 1147660 1148743 0.39 + . g240.t1 Scaffold_2 AUGUSTUS start_codon 1147660 1147662 . + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_2 AUGUSTUS CDS 1147660 1147720 0.69 + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_2 AUGUSTUS CDS 1147962 1148219 0.52 + 2 transcript_id "g240.t1"; gene_id "g240"; Scaffold_2 AUGUSTUS CDS 1148379 1148743 0.48 + 2 transcript_id "g240.t1"; gene_id "g240"; Scaffold_2 AUGUSTUS stop_codon 1148741 1148743 . + 0 transcript_id "g240.t1"; gene_id "g240"; # protein sequence = [MKTSTTRLPSSLLEQIQESDASLPKAYTSKLKNKVSLESNGTDDAKAAPKATALERLGSKQSKSLSLTTPIRTQQEKK # EDAYIAYLEAKLGYSKGKKAKRLDDGLDDELRYHVDESEPEEDSEDAREDDEGMENEDLGGEEEEEDVGDLQKLEHGASDAEGEGEEDEWHGIGQRES # TDVIDEDTSEVPEVFVPSSAPSAYFLSSYWNNAHISSISYTICSSTFACKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g240 ### # start gene g241 Scaffold_2 AUGUSTUS gene 1153192 1154001 0.98 - . g241 Scaffold_2 AUGUSTUS transcript 1153192 1154001 0.98 - . g241.t1 Scaffold_2 AUGUSTUS stop_codon 1153192 1153194 . - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_2 AUGUSTUS CDS 1153192 1154001 0.98 - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_2 AUGUSTUS start_codon 1153999 1154001 . - 0 transcript_id "g241.t1"; gene_id "g241"; # protein sequence = [MQSKSRSRSAPPFSTHDFGIGWELREDRYELEDLHMDPHDLAEFSSVEIFRDLHPRAMYWVDEDKVLKLFSYLIDVSV # IVANMDLARTRLPVPRVLRYGRSGNCSYILMERIPHSTLAIEMDQLGMNFMPWQLTQTMDHIVRELADLGLTHNDLVPRNVLVDKNGMISSIIDWDPC # TPHHRGGEYARKIRNFDLHWRYGEKEWYHIFLRYSFDRTGEEISIGCSKRHPKLYLQWPLVKSKASQLMNPPVTDRRNQSFSVRSTISPSIQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g241 ### # start gene g242 Scaffold_2 AUGUSTUS gene 1159094 1159942 0.78 - . g242 Scaffold_2 AUGUSTUS transcript 1159094 1159942 0.78 - . g242.t1 Scaffold_2 AUGUSTUS stop_codon 1159094 1159096 . - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_2 AUGUSTUS CDS 1159094 1159942 0.78 - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_2 AUGUSTUS start_codon 1159940 1159942 . - 0 transcript_id "g242.t1"; gene_id "g242"; # protein sequence = [MDTNLKICRWISADLAEFSTIEIFIDYHPRSMYWVDNDKVLKLFSYLIDVSVIVANMDLARTRIPVPRVLRYGQSGNC # SYILMERIPYPNLEVEMQQLGIKSMPWGLTRAIDYIVRELANLGLSHNDLVPRNVLVDNNGMIVSIIDWDPSTQHHRGGEYARKIRELSYFKDVAEED # WYHIFLRYAPDRTGEEIMIGCSKWHSKLGLQWPLVKRKASQLVSSPGLDPRNQSFSVSSTTSRSSKFDQQTFGQRQKIHPITVEPVDATFHPTHIRDS # AFPNISIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g242 ### # start gene g243 Scaffold_2 AUGUSTUS gene 1166285 1167477 0.2 - . g243 Scaffold_2 AUGUSTUS transcript 1166285 1167477 0.2 - . g243.t1 Scaffold_2 AUGUSTUS stop_codon 1166285 1166287 . - 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_2 AUGUSTUS CDS 1166285 1166865 0.85 - 2 transcript_id "g243.t1"; gene_id "g243"; Scaffold_2 AUGUSTUS CDS 1167162 1167477 0.24 - 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_2 AUGUSTUS start_codon 1167475 1167477 . - 0 transcript_id "g243.t1"; gene_id "g243"; # protein sequence = [MAGRGNYGYAYNYPGQGPPGNNPNAPPVYNPNAPPGHNPNAPPGHNQAPPAYYPNAPPGANYGQYQAHHYPGNTGNYT # GYVPHGYPAPPGGGNVQGAYQQTGNTAVLEGLPATLGQLPAGAVPPSYNYARNEGPLHSHGYSPPSPEVFNLHPQPQRGRTAQVPVVPGVPVPIHGGG # LRRHGQLDNTSSNGSGSGDHVSDESKKSTDENKYVVGHLSLGSHHSNAAGPSSGRNITPTADGFTKCSVCGQAYVVSDRDAHDSGCPGNAQSARKEGN # DNDTAGKDKGKGPKGKGKSGNTRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g243 ### # start gene g244 Scaffold_2 AUGUSTUS gene 1169968 1172623 0.13 + . g244 Scaffold_2 AUGUSTUS transcript 1169968 1172623 0.13 + . g244.t1 Scaffold_2 AUGUSTUS start_codon 1169968 1169970 . + 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_2 AUGUSTUS CDS 1169968 1170128 0.5 + 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_2 AUGUSTUS CDS 1170493 1170847 0.49 + 1 transcript_id "g244.t1"; gene_id "g244"; Scaffold_2 AUGUSTUS CDS 1170899 1171245 0.32 + 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_2 AUGUSTUS CDS 1171342 1172623 0.74 + 1 transcript_id "g244.t1"; gene_id "g244"; Scaffold_2 AUGUSTUS stop_codon 1172621 1172623 . + 0 transcript_id "g244.t1"; gene_id "g244"; # protein sequence = [MIFSSNRCLHVSHEPRLENMEGKIVAIDSSIWIYQFQATMRAKDGRALVNAHVLPTKGKGSAGEGPIELNDGTVYLED # IDSAIPSTPHKKTSKAKEPTSSAKKNKFYDHDPYRLPDVNLEARVAVATRSSAPDPRLATEDELRLFIENMRPEDFDVTSPAFRELPTEVQYEIQMLK # SAPTPLDFSKQQIKNLKQRNSLTQQLLTTTDSIGKAHISIPVRIASERNREYMLIRNEGATGGWILGIRDEGTKQKPIIIDHEEKKTQGNGKGNIKIG # QDSDEDDDMEEVSIHSALSAISRRYKPKPLAPLNTKGKQKAVTIPLFDLDEDDENEVSSVQAQQDYWEEDEELAFAIQESLEYSNVHTSMGASSSRTQ # VPFEMSQETGHQDTPRGTGSRSRLETALSIANASVSRSSDHEPVRSSTSFGQPFLLRSTPISEPVVESKSRVSSITTSDTVSNVSAGLNQLPSQSSSQ # IVPAVPVAKKTSPSSLKTTTYSGNLLKPEVHSSLPKGLNKLTIVPPAASSIVELGLQPERAPSMPLREDDVDGAEVSGVKENNHSYMIVPPLSSEDED # DMEEISMRNSLTTRANASPPPDEPTIISTSELDSELNQTTISPLRSSPPEKPPPEHDRSRPPTPPLDEDWDAAHEMNPDAEEGDFAQFVSQVKGRNID # DVRREIDAEIASLDQQRKNAMRDAEDVNQQMVTQIMVHSERSCSRNKC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g244 ### # start gene g245 Scaffold_2 AUGUSTUS gene 1175830 1176768 0.39 + . g245 Scaffold_2 AUGUSTUS transcript 1175830 1176768 0.39 + . g245.t1 Scaffold_2 AUGUSTUS start_codon 1175830 1175832 . + 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_2 AUGUSTUS CDS 1175830 1176768 0.39 + 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_2 AUGUSTUS stop_codon 1176766 1176768 . + 0 transcript_id "g245.t1"; gene_id "g245"; # protein sequence = [MDLQLLIFLFPAGVIMCFRELRDEHVFVIIYAVVASYFAGVMVRLMLTLTPVVCVSAAVALSTLLDTYVEAREPHVPE # ERTEANGSSAPDGKKTKKAGGAVGSQASTTAVAAASSAISDFVSATRSSASSPRQKGIWGADTRLVILLNAIGMLVFFVFHCTWVTSNAYSSPSVVLA # STNPDGSQHIIDDYREAYYWLRMNTPQDAVVMSWWDYGYQIAGMADRVTLVDNNTWNNSKFSILEKNNQVIHSLLAHIATVGKAMSSPEEVAYPILRK # HDVDYVLVIFGGLLGYSGDDINKFLWMVRNFLRFTIHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g245 ### # start gene g246 Scaffold_2 AUGUSTUS gene 1178697 1179233 0.96 - . g246 Scaffold_2 AUGUSTUS transcript 1178697 1179233 0.96 - . g246.t1 Scaffold_2 AUGUSTUS stop_codon 1178697 1178699 . - 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_2 AUGUSTUS CDS 1178697 1179233 0.96 - 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_2 AUGUSTUS start_codon 1179231 1179233 . - 0 transcript_id "g246.t1"; gene_id "g246"; # protein sequence = [MTSIVQRTSWRAARLSLARYASSSTSASGRAYVPLDIDTNPEPLQDYQYAPPISHQYRAPYGWDDMQMRRNFGDPVSD # VALSILETHSNLQLPEHDELMSMWGPDLPPPGVKPRTALIHFLLAVAGFTGIFYTTKWVLTPEPHFIRRTYPYDGLATALGGLPENKVCVAAQSHCNL # YN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g246 ### # start gene g247 Scaffold_2 AUGUSTUS gene 1180411 1181260 0.36 + . g247 Scaffold_2 AUGUSTUS transcript 1180411 1181260 0.36 + . g247.t1 Scaffold_2 AUGUSTUS start_codon 1180411 1180413 . + 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_2 AUGUSTUS CDS 1180411 1180692 0.36 + 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_2 AUGUSTUS CDS 1180778 1181260 0.46 + 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_2 AUGUSTUS stop_codon 1181258 1181260 . + 0 transcript_id "g247.t1"; gene_id "g247"; # protein sequence = [MTVFSTSPWDRSDDDLMDGTLKKKTSLSPLQESPTSTLPTPISHISPKSANSHKMYSSSFVPQLPPVPSPPLADSSFH # TNPQDHSRLKAAWDAMTHPTLHIPLPPNSSLSDSKLFCSDYSSSANAFNPEEQFELKRSTGRHSDEENPRRRDSTLARDPKKVFSWAPMHLARTVQTV # KACKEAIWDEYDKLHSPDLPPTITQARLKEGHRAVVSSKSAARESFDRAWDNWEKSVTFNPTRSLITVLTVLLRYFLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g247 ### # start gene g248 Scaffold_2 AUGUSTUS gene 1184730 1185180 0.82 + . g248 Scaffold_2 AUGUSTUS transcript 1184730 1185180 0.82 + . g248.t1 Scaffold_2 AUGUSTUS start_codon 1184730 1184732 . + 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_2 AUGUSTUS CDS 1184730 1184875 0.82 + 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_2 AUGUSTUS CDS 1184934 1185180 1 + 1 transcript_id "g248.t1"; gene_id "g248"; Scaffold_2 AUGUSTUS stop_codon 1185178 1185180 . + 0 transcript_id "g248.t1"; gene_id "g248"; # protein sequence = [MKTSRTVLSEVQKKAGAFPSTSVLSRTKNVLEWDYRKLYNIVLLSPMMLYTPANTFVAAFHFTIALLPGGPSMITLPP # IWYKPELVKTEKELEDEELKALLARNLRESKKSKKKKAAKEGVEAGDDANEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g248 ### # start gene g249 Scaffold_2 AUGUSTUS gene 1188967 1189731 0.91 - . g249 Scaffold_2 AUGUSTUS transcript 1188967 1189731 0.91 - . g249.t1 Scaffold_2 AUGUSTUS stop_codon 1188967 1188969 . - 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_2 AUGUSTUS CDS 1188967 1189731 0.91 - 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_2 AUGUSTUS start_codon 1189729 1189731 . - 0 transcript_id "g249.t1"; gene_id "g249"; # protein sequence = [MSMKAYLAEKYMSGPKADAILARDPLKKKKKRKAKDEGFAVQKALIKDDDVGWGHEPNDEDEDMAEAVIEKDRGFKKR # KTAASGEGSSGWTTVRPAVEEHPAPDEQPMLVVERGEEKPFVGGLVKGQMKKPGPKQVSEPEETAEEIARMQETVYRDATGRKIDTKAARAEAARKKR # EKEEKEAQKMEWGKGLVQREDKEKMKAELEKLKSRPFARGVDDKELNEEQKAKDLWNDPAAAFLTVCFVFNIHRHGID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g249 ### # start gene g250 Scaffold_2 AUGUSTUS gene 1192318 1193484 0.91 + . g250 Scaffold_2 AUGUSTUS transcript 1192318 1193484 0.91 + . g250.t1 Scaffold_2 AUGUSTUS start_codon 1192318 1192320 . + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_2 AUGUSTUS CDS 1192318 1193484 0.91 + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_2 AUGUSTUS stop_codon 1193482 1193484 . + 0 transcript_id "g250.t1"; gene_id "g250"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g250 ### # start gene g251 Scaffold_2 AUGUSTUS gene 1193773 1194648 0.97 + . g251 Scaffold_2 AUGUSTUS transcript 1193773 1194648 0.97 + . g251.t1 Scaffold_2 AUGUSTUS start_codon 1193773 1193775 . + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_2 AUGUSTUS CDS 1193773 1194648 0.97 + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_2 AUGUSTUS stop_codon 1194646 1194648 . + 0 transcript_id "g251.t1"; gene_id "g251"; # protein sequence = [MEHLTELDGLTHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEIL # YSHLAATHTETPILELPELEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVK # TFEEMVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQ # DYRKLNEYTVKNRYPSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g251 ### # start gene g252 Scaffold_2 AUGUSTUS gene 1200030 1201734 0.2 - . g252 Scaffold_2 AUGUSTUS transcript 1200030 1201734 0.2 - . g252.t1 Scaffold_2 AUGUSTUS stop_codon 1200030 1200032 . - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_2 AUGUSTUS CDS 1200030 1200644 0.74 - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_2 AUGUSTUS CDS 1201393 1201734 0.21 - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_2 AUGUSTUS start_codon 1201732 1201734 . - 0 transcript_id "g252.t1"; gene_id "g252"; # protein sequence = [MPTNDDLDFIQKSSLWLISDLLLRYTPGSDKWKNRHKMREEVDKMMPSDRPLPPKKTDTRPFGVFDINEGSKKGQVKL # NEAMRKRARQTEESWVQYTAIRVGDWLTSMLNRGAARVFIAHGDGVTIDYIVQKGSACIEVSREVSHLIANYFGNPDRSRAHKEVKFFEDLRVTVEEL # ERLGIHSRTKERFVPAKLRANAKNPTPHSAVIDAQVHGMEIWADGNFTNYIRLTTYDPNTKSYPLGNPAKPPTRKEISENQEDEEDEENADEYDRNHA # TYLNSGTVFDNTEENILAFNNYEDIEGGGSLGGGEEFSSGEIIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g252 ### # start gene g253 Scaffold_2 AUGUSTUS gene 1221746 1222432 1 + . g253 Scaffold_2 AUGUSTUS transcript 1221746 1222432 1 + . g253.t1 Scaffold_2 AUGUSTUS start_codon 1221746 1221748 . + 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_2 AUGUSTUS CDS 1221746 1222432 1 + 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_2 AUGUSTUS stop_codon 1222430 1222432 . + 0 transcript_id "g253.t1"; gene_id "g253"; # protein sequence = [MEASPQNNLLAQAPLPHTPKQKQAGGPPVVKNTPGSHNYTAHAKDKVPQRASVLNKFLQDDISDRAVLSLDDFATLIL # DLPPDWRIKEEFSLLPESEVVRETFEAYLTAAIGATEGEGKRKKKKGKAAAVREKELYQPLANLLNSLRDGKGRHMKKDIDEKIFYVQDPRPLLGSLL # ERKPDLGAIYIQLLELTKNAKLSKYLGKNKIAGVFGDCYYSSWKSSTRKDVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g253 ### # start gene g254 Scaffold_2 AUGUSTUS gene 1231186 1231935 0.41 + . g254 Scaffold_2 AUGUSTUS transcript 1231186 1231935 0.41 + . g254.t1 Scaffold_2 AUGUSTUS start_codon 1231186 1231188 . + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_2 AUGUSTUS CDS 1231186 1231801 0.41 + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_2 AUGUSTUS CDS 1231895 1231935 0.41 + 2 transcript_id "g254.t1"; gene_id "g254"; Scaffold_2 AUGUSTUS stop_codon 1231933 1231935 . + 0 transcript_id "g254.t1"; gene_id "g254"; # protein sequence = [MQAQSQASTHQSSPAASTPIPAPVPTSATASAFPNLASTPRPSNLSSTPRPAGSGTPRPHPTAAAPPTIRPGSAKPGL # QPVQIPGPGIRVTTPLRTATPTGPHPLSAPPLSASFVSPPGSFSAPQPPSNALNAVAPPRGKKRERDESMPAPANGNGVAQVNFSGNSANIGATPNTI # PKAIIGARAGNNGVRPRPIPPPMKKQRIVSYACLEHFNAIIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g254 ### # start gene g255 Scaffold_2 AUGUSTUS gene 1233541 1235135 0.37 - . g255 Scaffold_2 AUGUSTUS transcript 1233541 1235135 0.37 - . g255.t1 Scaffold_2 AUGUSTUS stop_codon 1233541 1233543 . - 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_2 AUGUSTUS CDS 1233541 1234610 0.5 - 2 transcript_id "g255.t1"; gene_id "g255"; Scaffold_2 AUGUSTUS CDS 1235021 1235135 0.37 - 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_2 AUGUSTUS start_codon 1235133 1235135 . - 0 transcript_id "g255.t1"; gene_id "g255"; # protein sequence = [MLFCLANALNTSATIFEALSEVDSKFAKLADKEYDGVSATTFNVAASVSRLADAEWLRSCESVRRFAPSVGKLIEWRT # YCEGGWTGPIPTDLRDVDVLRPPSPADQTPRGSDYEDDIEHRAISTPTRKAEIMTPNDMLATVQVLKFPPPSLTSNDPQTQTQTQPQTQLLPSPALTQ # AGSQYQSKQDQTNQQSAPPSSFEPPRKFTDSDNTGSVRSLSQFPAPPTHFPLPPPLTQRRSTGSSSPVTSFPSLNANRFERQSPGSEDVLDNTTTDSS # SNPLKLASSERPGLNESIVQSKQAQSPQQSQLDEATSERKVSTNYTARDQPSASPTQSSSTHSYSSKSGPDSKEERTGSAGQEVARAGSNGSIVATMR # NRYSYTVSKVLITLRLALTNQC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g255 ### # start gene g256 Scaffold_2 AUGUSTUS gene 1236616 1237080 0.93 + . g256 Scaffold_2 AUGUSTUS transcript 1236616 1237080 0.93 + . g256.t1 Scaffold_2 AUGUSTUS start_codon 1236616 1236618 . + 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_2 AUGUSTUS CDS 1236616 1237080 0.93 + 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_2 AUGUSTUS stop_codon 1237078 1237080 . + 0 transcript_id "g256.t1"; gene_id "g256"; # protein sequence = [MPNPTYTGYLRNPSRIPDVKSPLDKGSSPNTPTRITIPPSSVFDQAAEIERLPAANYSSSSNSQDVDEALLEESYVPP # VDEGLDDLWETLRQKKELKMAKETPKVRSLQEQPVEEEFSHIEAPDLDVPVGTQRSETLRRQKSMCVHQSGWNLVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g256 ### # start gene g257 Scaffold_2 AUGUSTUS gene 1242389 1244526 0.84 + . g257 Scaffold_2 AUGUSTUS transcript 1242389 1244526 0.84 + . g257.t1 Scaffold_2 AUGUSTUS start_codon 1242389 1242391 . + 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_2 AUGUSTUS CDS 1242389 1243420 0.84 + 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_2 AUGUSTUS CDS 1243474 1244526 0.99 + 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_2 AUGUSTUS stop_codon 1244524 1244526 . + 0 transcript_id "g257.t1"; gene_id "g257"; # protein sequence = [MAATHSFVGSSYTTIHNGDLATDAQATPNPKPRKQSRKFNRAHVRTVSNQSDASIQTTPSPTRGSGIATSTLTEQELL # PLPSSLTGHSVQATPSRKRRQSKLMRSPHTFNPNADYIPTFRTNSDEESTNVENDQSRWPYTKKTVRMGRRSVTPATIPPYEPPPVMFTPPREVVHSP # VTSTTKSKRKAGKTKGLKLDLQIKSEPPDIDYLNAPMPPPSPTDDPLLLSGPPEGSCTPSRSRTMRDASVSADFAQNIRKQPSFALEKESLPPSSPPA # QDDSSSSPSQATYHWPNTGVVQEDDRSTDSMELDMQPHEYAEMEGIPYFGFGLEGFAVASAGAWSDSDEEGPHTPVRETGVIDEGIGEFTGHWRMTQV # PTKADPPSSTTRTRMDDWGRPKSPYPYRRPSSSSSLPRVGSTSPSPSHPKSRVNASATADVEEADRSVPLADEDHTITLHPPFTEPPSAQEAETRSYH # EHKNIEDAEEQEEQEVRALSISPDDEGEDSADEEEVRRLSLGPEQQFEEKDPDLEQEESEVEDLNLSSASFDMVVGDHIAEPSGVTATAHIPRRVHSA # ESQACSSPAPLRDLAFLSDKRRGNTRLSALERAKELFGTRSSPVKPLSGLAQIFDDDEQDAEAAHSSHQVNERPITVDKVFEEEEEELKMDAAEDAAE # MSSGDESDPMSQDPGLVQITSSDPKAAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g257 ### # start gene g258 Scaffold_2 AUGUSTUS gene 1244917 1246268 0.49 + . g258 Scaffold_2 AUGUSTUS transcript 1244917 1246268 0.49 + . g258.t1 Scaffold_2 AUGUSTUS start_codon 1244917 1244919 . + 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_2 AUGUSTUS CDS 1244917 1245302 0.49 + 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_2 AUGUSTUS CDS 1245371 1246268 0.88 + 1 transcript_id "g258.t1"; gene_id "g258"; Scaffold_2 AUGUSTUS stop_codon 1246266 1246268 . + 0 transcript_id "g258.t1"; gene_id "g258"; # protein sequence = [MPEDNALVGMGLGERASYRTPLPAKYGLAIRPQSTLVHEIRDVEGDHQNDQQLAYKEWTKEEWRILDACFTDERIDLA # SRSSSNSISSPLNDGHEDVPLAEVDFVDVDVVVQRFIVEMGGDDITNARGCLRARAKAIQKKQRAGHVAPPTTPYTPRTISKSREPSSSMEVPDFTPL # NRRPFPLRNPGLLPPPGGSTAPFSSIPDDVVEEPRRHKVPSTLLAPRYSHLLHEAVAISRELASEEPSLTNSEMDTLSYLSFPTVKTSSLPKAGLGRL # FSYIPGFLKTPATSTRKAHDSKPGLPLPPAEIIDKHRGPIVTPARPPAPKSKPPKELVNLHHQPVPDKKETSKIPRKVPQRMVQLNQVGLPKERQEPI # VRPRRSSGGSVKDLIKTFESFDDNAQHTASVRNIGNWKKGLPGSEKSCSKPLWKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g258 ### # start gene g259 Scaffold_2 AUGUSTUS gene 1255387 1256907 0.96 + . g259 Scaffold_2 AUGUSTUS transcript 1255387 1256907 0.96 + . g259.t1 Scaffold_2 AUGUSTUS start_codon 1255387 1255389 . + 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_2 AUGUSTUS CDS 1255387 1256907 0.96 + 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_2 AUGUSTUS stop_codon 1256905 1256907 . + 0 transcript_id "g259.t1"; gene_id "g259"; # protein sequence = [MISYLENHRKGFQKAAGIAGGLYLVRGYIHSRLEEVKEKIELERLAQDILYRRYEQTQEDVGYTVMALLSNLGEQILE # EMDVEAVIGELQMMSNKSFLEGSESMSASVSSSISSSSALSTSGLQGWVDAAGAQAQSPTGYSSSEETSSVTSGSFISNISTIESEPNSSSASVASLP # STSSDPTSSRSKAQLWNSVKLLTFTRTLTTIYSISLLTLLTLTQLTILARVKYIRAIKHMSSEEDQEAALEGELGMSNMLFMALKARFGIPQQPLLKT # FLPSVHELLFAPADDEDLPEHPLSNIAFDTLSADYLTLSYYLLHIGWKNLSTHIQSAVEEVLEGVSLKTRLSESDVHRLLKDMMQRVALEGLTASMLP # NTEDMVRSVLVLGGRDDHDPYSPSQGAALSTSMDDLLSETRTLFSSYRFTEVLDTCVDWAVDSLMKSFEGEGRVFASGDAEAPRVRLASILPPLASWS # RTSLLALPSELVDGILAKDETRTFSAWIWAKFELEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g259 ### # start gene g260 Scaffold_2 AUGUSTUS gene 1257277 1257642 0.93 - . g260 Scaffold_2 AUGUSTUS transcript 1257277 1257642 0.93 - . g260.t1 Scaffold_2 AUGUSTUS stop_codon 1257277 1257279 . - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_2 AUGUSTUS CDS 1257277 1257642 0.93 - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_2 AUGUSTUS start_codon 1257640 1257642 . - 0 transcript_id "g260.t1"; gene_id "g260"; # protein sequence = [MYFDIVRKEYSRCSIEIHPLQPLIDIPAYDVALDDKSLVPADPPPLPPTSELLPAIPAQTYIYNDLENLEADLWSFED # FIKNNAWKWYGDASNDNPDITEVDRRRELGTTSTVEGTIEVLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g260 ### # start gene g261 Scaffold_2 AUGUSTUS gene 1258791 1259588 1 + . g261 Scaffold_2 AUGUSTUS transcript 1258791 1259588 1 + . g261.t1 Scaffold_2 AUGUSTUS start_codon 1258791 1258793 . + 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_2 AUGUSTUS CDS 1258791 1259588 1 + 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_2 AUGUSTUS stop_codon 1259586 1259588 . + 0 transcript_id "g261.t1"; gene_id "g261"; # protein sequence = [MTDRTETIQQLVQENFEALDFIPLRIENAFDPAWWDRVGGKLTSDMNADLINDGALDPLQIIIVLISDSDLFVSNVFD # SPASEPVQRLRSYISALPTHTAIDSTIHTLIRILLLYTARSTRSSHLLLGTSLTSLSINLISSIAQGGGFSVREEAQEEWKSDSMETVRLIRPLQEIT # MKECSMWAWWNNLRVLGKQRHPGVKQGIGALTKGAPSSMRYENFISFKSSDFIVGLERDYPSTVSTIARTCAKLAPRVGASGSCILCER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g261 ### # start gene g262 Scaffold_2 AUGUSTUS gene 1266801 1267115 0.64 + . g262 Scaffold_2 AUGUSTUS transcript 1266801 1267115 0.64 + . g262.t1 Scaffold_2 AUGUSTUS start_codon 1266801 1266803 . + 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_2 AUGUSTUS CDS 1266801 1267115 0.64 + 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_2 AUGUSTUS stop_codon 1267113 1267115 . + 0 transcript_id "g262.t1"; gene_id "g262"; # protein sequence = [MFSRAISAARPAATRALRSNSKPLNLRAFSVTPRASSGGHGPAPPGLFGPGAKPGEVPGIAEQSTGLERLQYLGDAEG # IEVFDTAPLDSSRIGTKKDPILVPSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g262 ### # start gene g263 Scaffold_2 AUGUSTUS gene 1269752 1270448 0.28 + . g263 Scaffold_2 AUGUSTUS transcript 1269752 1270448 0.28 + . g263.t1 Scaffold_2 AUGUSTUS start_codon 1269752 1269754 . + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_2 AUGUSTUS CDS 1269752 1269941 0.28 + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_2 AUGUSTUS CDS 1269991 1270448 0.9 + 2 transcript_id "g263.t1"; gene_id "g263"; Scaffold_2 AUGUSTUS stop_codon 1270446 1270448 . + 0 transcript_id "g263.t1"; gene_id "g263"; # protein sequence = [MCDQLVNSCGADATAKATCASAAAAADTATAKTGAQADKFNAVFGIQTNFAAVPVVSDQGVTLDFDAHFLCALAPLIS # STLARLMSTLRWLGTSAAASATSAVAVASAALLPRHLLLRLLAASDKVSKSNLTSVMIQATVTVTVTAADAASTSAAATDAATDATSAADVGTTSVAV # ASATAAASSSAAVATSTASAADIGNFGRAHQRSSIFFGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g263 ### # start gene g264 Scaffold_2 AUGUSTUS gene 1273917 1274870 0.45 + . g264 Scaffold_2 AUGUSTUS transcript 1273917 1274870 0.45 + . g264.t1 Scaffold_2 AUGUSTUS start_codon 1273917 1273919 . + 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_2 AUGUSTUS CDS 1273917 1274870 0.45 + 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_2 AUGUSTUS stop_codon 1274868 1274870 . + 0 transcript_id "g264.t1"; gene_id "g264"; # protein sequence = [MYNGYNSPITNNPFISDSTSAQSRYPDLSGSSPSPDPSGSQFTSWLQPGGSQQQYQQQQYHQQTPPQYNGIGYQPTGA # IDGNGFIASQFQPSSGFGQQMLGQMTGSSYSYLQGQNSSALGQMSYNPVQQQLQSPGYNSIAQFDPYSSVGGQGGNPSSAQHQPPSFQSPTSPISPAT # PITTSRSASGAIHPREYIKTHKAEVESWDPYAWKQLLNAFDDLKEAWASRKNEIDGRAQQLLMQMQYSGGYHPQMQQEAERLRAVCGSSLRCVSISSV # TSQLSKEADINHGVPFGYLASWANSDHNNHVYRLCGRFIFPNA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g264 ### # start gene g265 Scaffold_2 AUGUSTUS gene 1278714 1279589 0.99 - . g265 Scaffold_2 AUGUSTUS transcript 1278714 1279589 0.99 - . g265.t1 Scaffold_2 AUGUSTUS stop_codon 1278714 1278716 . - 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_2 AUGUSTUS CDS 1278714 1279589 0.99 - 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_2 AUGUSTUS start_codon 1279587 1279589 . - 0 transcript_id "g265.t1"; gene_id "g265"; # protein sequence = [MNQSTSPESLHFISYPLSENDNFSDSDWLEIASNRESDTESVSSNNGAASSSHSRRSSISTGSSRSGDVEAWEGFLEE # ITDEVEAKINEFNPTNPDNEQSTSPFIDLDEDHLEERRVRDGLNQSLTSTLGTSRISSHPSTVHNSLRDLRLSFPDPLSSSHDEMNRSYDRVSSSEAA # SATLTEGGENDELGSSQVDMPEITLIRDPGLPPTPEAPGQNALQSIQIHSTVRSSNLQVVLYGTSFKWSFVDELLRKAIVGGEIAGIDGSETEQLRPA # IFDCMDLVSIVSSIHAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g265 ### # start gene g266 Scaffold_2 AUGUSTUS gene 1286659 1287477 0.51 + . g266 Scaffold_2 AUGUSTUS transcript 1286659 1287477 0.51 + . g266.t1 Scaffold_2 AUGUSTUS start_codon 1286659 1286661 . + 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_2 AUGUSTUS CDS 1286659 1287477 0.51 + 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_2 AUGUSTUS stop_codon 1287475 1287477 . + 0 transcript_id "g266.t1"; gene_id "g266"; # protein sequence = [MIVDKSKEPEDAPPAYAAINSGSSGSTSFNDNKLPHSPLPVSEPISPTPSSFSSKGKGKVPAVSSWWSFGTSQTAREI # RTTVLGIVRDLVKVKSGNAVAAQSILESCAEACSGYSLSLSSLLQEKSIESHTPLYWAIINRPPDKSDDAINGTSDLLTTLLSYTAPLSPDILVEVRQ # ACLITDDQLLFQRLRLSPEFASLSGTDEMLLGEVMIPDDVTVKNMLGDDGAFAVDFRIPHFQKRMRVSNEVGVEFIARGTMIIYSSSNFDTNLSPE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g266 ### # start gene g267 Scaffold_2 AUGUSTUS gene 1288262 1289584 0.07 - . g267 Scaffold_2 AUGUSTUS transcript 1288262 1289584 0.07 - . g267.t1 Scaffold_2 AUGUSTUS stop_codon 1288262 1288264 . - 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_2 AUGUSTUS CDS 1288262 1288685 0.69 - 1 transcript_id "g267.t1"; gene_id "g267"; Scaffold_2 AUGUSTUS CDS 1288754 1288932 0.98 - 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_2 AUGUSTUS CDS 1289001 1289213 0.68 - 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_2 AUGUSTUS CDS 1289303 1289584 0.09 - 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_2 AUGUSTUS start_codon 1289582 1289584 . - 0 transcript_id "g267.t1"; gene_id "g267"; # protein sequence = [MENFTDESSDLPVFPELMIRQCAEWPEGEPNSSVQHTFELPIDSELLFLVARGPSINGNINITQSDEEGDSAVVSIRT # HYDDETLLDSIKLCDVSSHPHPHRHMHNIYFDINVAFPKHSEKFPLVVSDFRTEMHGIFGHQVANLSEAIVFNSVSLTGAYKPVKVNSLQAHSVRIES # PHSPIEGNFTVRKSLRLSTANARINITANLLNDETDEDMTELIMNTANSPIEASVSLFSVDAGEITSSGGAFRVRARNANSPVKVAFPTAPINSTVVL # DAKTAVAPLDVQMHGTFEGAFTVHTTPFDKRVVVAEEGLDPEGKGRKRNLIFDRYTGGISEGTVFWGQGEPGKQRGSVRLDTVSGQVSLKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g267 ### # start gene g268 Scaffold_2 AUGUSTUS gene 1292694 1294474 0.53 + . g268 Scaffold_2 AUGUSTUS transcript 1292694 1294474 0.53 + . g268.t1 Scaffold_2 AUGUSTUS start_codon 1292694 1292696 . + 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS CDS 1292694 1292892 0.67 + 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS CDS 1292967 1293266 0.94 + 2 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS CDS 1293338 1293386 0.99 + 2 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS CDS 1293488 1293635 0.88 + 1 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS CDS 1293686 1294474 0.86 + 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_2 AUGUSTUS stop_codon 1294472 1294474 . + 0 transcript_id "g268.t1"; gene_id "g268"; # protein sequence = [MTKTSQRYEGVVFSTNGEGDTTGVTLKDVKELTNPGAPLKDQLFIASTNIENWSSGPADAKFTNGDNISQKKTGGGGE # KELQAWQAPPDAPATSEGTQFARGDDVTFGPGSNSNASWDQFTTNEKLFGVKATYDEDAYTTKLDRSAPEYKERAREAQKIADEILGVQERNQAHDDS # GINEEDKKPGLPNATKTEIPKVSVNGPDGATISSTSQSPASSSKNPSPAPNANANKPPADALPALREFVANEKQRLTEKRQALAKSEMDKRMADLVKF # SQSFKVLLSRLQFPYLNYQQLNKPIPDDLVPILAKDEDKQKQIREKSNKDANSSQARNIGSSVSTHSVPARGPHITTAKVVEAGRKTAATATSTTKAT # TQAAGVAASATNKAEATKPTKPMMFIQPIPPFKGSKRQSLQPSPNANGVSNGANAAQVSGATKAPVPNAPANRLNAGLNVKASTFNPRAVAFTPVGFF # WSLSTPVVVSHSVRFSSGRSFSWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g268 ### # start gene g269 Scaffold_2 AUGUSTUS gene 1295818 1298941 0.6 - . g269 Scaffold_2 AUGUSTUS transcript 1295818 1298941 0.6 - . g269.t1 Scaffold_2 AUGUSTUS stop_codon 1295818 1295820 . - 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_2 AUGUSTUS CDS 1295818 1298118 1 - 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_2 AUGUSTUS CDS 1298288 1298941 0.6 - 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_2 AUGUSTUS start_codon 1298939 1298941 . - 0 transcript_id "g269.t1"; gene_id "g269"; # protein sequence = [MLKFDRVEDADQVYRTGVKRHARPIERLKARYTDFRKRHGKKPVISQDISKTNTAAACSPKQLSSAASRYATMLAPPQ # PGKPPEKLRFDMTLLYTEKTGEFCFEEARTRSMGLLRKEWPVLPVESLAHSARSSSLTVLRPGEGRFGKRKSMLAGEPTVTINTREALEDVFGMYNSP # ERTIRMGSKHAPVKKIEPVAMPRMTTSPPTTLGDGIHKSAGLFTPFVDLENKTPTHKSRSAFAEKEAAPHQNENLLQDSKKFTKRDNTSVESIFSQKV # FIPESEIQPLPLREAHTEDHGQPRPKTILTHERAKSDHDVGKASHPVAFRPFVDPGPETSFKVFSRPSEGKSIFTPKLSTMKLSVPPAKQPTFTPYKD # PAEDNIQIEPLTEKKHQSHVDYDEPEYDEEFDQGNTPHQQEQQDAIDLDQYPEEDDNDYSDDFIDEECQEDVVEPLREELGEMYDGQEVDYHDVPFGG # RFGQFSVMTPITERTFEYTSTSHSTFNTPSILSKHAPVIEEEQDSQLEAAQLVPDGADEFEHEDEAGGLHDIHPLRLPSEASISTLTQSTSKLSLVDT # LTLSSNFKPSNPCNPFDPPIFQALLSRLNADSQYYDLTGTYHNGYDELQKYAKKNRKTSSSSGGGDAVHSLTLNGQKFVVSEKLGEGGFGAVFKARDC # GALSDCDSDFEDEDEMEGDEASMVALKVVKPRNIWEYHVLRRLHSALPPANRRSIVFPHALYAFRDESYLVLDYCPQGTLLDIVNTAESAGVSQQGAC # LDELLVMFFTIELLRLLEIMHDIGFIHGDLKIDNCLLRLEEVPGGPSSWSSAYRPSGEGGWSYKGLKVVDFGRTIDTRLFPANQQFIADWETDERDCI # EIQQGKPWTFQTDYFGLAGIIYCMFFGKYIQASAIGSSTSPDGKVKFRLTTPLKRYWQTNLWERLFHLLLNPVDVRSHGHMPLSEELGSIRTDMEAWL # QANCNRTTGTLKGLLKKVEMSCLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g269 ### # start gene g270 Scaffold_2 AUGUSTUS gene 1299707 1301962 0.88 + . g270 Scaffold_2 AUGUSTUS transcript 1299707 1301962 0.88 + . g270.t1 Scaffold_2 AUGUSTUS start_codon 1299707 1299709 . + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_2 AUGUSTUS CDS 1299707 1301962 0.88 + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_2 AUGUSTUS stop_codon 1301960 1301962 . + 0 transcript_id "g270.t1"; gene_id "g270"; # protein sequence = [MQSDANVFNVEEEESLFGSPPPSPRIGRSPSPVLALPSRSGSIVKLQNVGTIALPGSHYISELPVNPLVLPSSFSTQA # AAKPLAPFQISAGHFGGPTSPHHSSSSSTPCSSRASSQGPLSGQSKGKHGRRRREDESRVVRVPPPEIPLPDPTGPPPANWLRSQSALLGHAGLIGGV # KTSTLSNRHFRGSTAKNPIVIDDNQHSNQQQHHHPSPKRSRPAPRYQLPLCLDLPAPSIQEIVRILIKQREIFPILQNILKLSRNGFPGFIKDTNNSP # SPGPVPKKRKLNKVPAGAVDWDVPYPFQPGEGPEAYSATWEQTRGKQLVSQLVSLIKAASRKAAIRKYMEQDRQIELQTTMQDHNLMKEWEHAMPKVE # GHYRHETTLYGLPDMPSQDILADASNNPVKSSDLPVRSSPAPESSPFDELLASLLTVSPKSGDSNEAATSPSNLGSLFANTGAQESTPELDQSVIDNW # MSIFQTYQVPPSLEETATYFSDSSSLAPQIAGPSSIPDLPLDLGPWARVSNGPGDGNHLSHSVVSLYPTSNIGGQPQTDAHSSDSTSFDLKSLAPSMN # PWDTELVTPMLPTAGYLDAFNGLIPTSSPKEYGEPYFSSGMMEEGIGGSGGHLPMGLMDCPQGMWWRTISETVRTHHNKELQGIDQPAKHPPNFSAVP # LSALFPTLARNMPPPPTITGTSSVFTPPAVRPYNSSGRTINKVDLLSRARERRAQLADEILKTRTQLWETTIEHGVLTRLAKLYT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g270 ### # start gene g271 Scaffold_2 AUGUSTUS gene 1305483 1306106 0.91 + . g271 Scaffold_2 AUGUSTUS transcript 1305483 1306106 0.91 + . g271.t1 Scaffold_2 AUGUSTUS start_codon 1305483 1305485 . + 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_2 AUGUSTUS CDS 1305483 1306106 0.91 + 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_2 AUGUSTUS stop_codon 1306104 1306106 . + 0 transcript_id "g271.t1"; gene_id "g271"; # protein sequence = [MRWDYGNVQTGTCEETIDGGNHFRYWIQNGSAADSNAVFVAASYELPASSTSRTSREVICLTHEAPSCRLGNHDIVVN # GYNFGRDWIVGNITGSTIPTASLTNSSSYSGNTSSNGFSFSTTVQYVSGLLPNTSVGINHNLTVATDGENAVDGFVAVLTVKITATNSSASAAPSATS # NSSSNSAAPIMLTSCLPLLLLPLVVLTSYPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g271 ### # start gene g272 Scaffold_2 AUGUSTUS gene 1306363 1307223 0.66 - . g272 Scaffold_2 AUGUSTUS transcript 1306363 1307223 0.66 - . g272.t1 Scaffold_2 AUGUSTUS stop_codon 1306363 1306365 . - 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_2 AUGUSTUS CDS 1306363 1306942 0.88 - 1 transcript_id "g272.t1"; gene_id "g272"; Scaffold_2 AUGUSTUS CDS 1307047 1307072 0.87 - 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_2 AUGUSTUS CDS 1307161 1307223 0.72 - 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_2 AUGUSTUS start_codon 1307221 1307223 . - 0 transcript_id "g272.t1"; gene_id "g272"; # protein sequence = [MGAKLTAEVEAQADSAGVRTDESASEWNSLFHVEEYSDLYYDPTILRESAQKQYEEENGPSEEQQERQGQTLNIQRDN # SFHLSNPHNPPPNRHSGPMGGGPPPINYPYPNSPSVMRGPGPGQGFPPGMPSNQYGRHDASPARMQMHMSGGMGGVVGGGMGMGGMGNMGGMGGGIGS # IGGNMDFGHQNPAMAMGGGGMGGMPSPGMMAGRRMTRGMTEEYGMH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g272 ### # start gene g273 Scaffold_2 AUGUSTUS gene 1318030 1318572 1 - . g273 Scaffold_2 AUGUSTUS transcript 1318030 1318572 1 - . g273.t1 Scaffold_2 AUGUSTUS stop_codon 1318030 1318032 . - 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_2 AUGUSTUS CDS 1318030 1318572 1 - 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_2 AUGUSTUS start_codon 1318570 1318572 . - 0 transcript_id "g273.t1"; gene_id "g273"; # protein sequence = [MNFTSCFKVDQTKGLINLSGTNRALNLNQTTPATGPAGSASHIIFSEDNTQLIASVKGVPPTPGFLAVWDVATDGSLS # PVFKTITPSQGGLLPFSMTVIEGKNALLATDAGVGFDIFDLSTSGGNASSVVPIDGQSATCWSSFSNQTGNFYLTDIGTSMVTEVNVDDNLKGSIVKV # RMFN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g273 ### # start gene g274 Scaffold_2 AUGUSTUS gene 1321000 1322247 0.73 - . g274 Scaffold_2 AUGUSTUS transcript 1321000 1322247 0.73 - . g274.t1 Scaffold_2 AUGUSTUS stop_codon 1321000 1321002 . - 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_2 AUGUSTUS CDS 1321000 1321586 0.8 - 2 transcript_id "g274.t1"; gene_id "g274"; Scaffold_2 AUGUSTUS CDS 1321683 1322247 0.92 - 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_2 AUGUSTUS start_codon 1322245 1322247 . - 0 transcript_id "g274.t1"; gene_id "g274"; # protein sequence = [MEHEDQVDHDQEQFITDEDVLAEVPDDGDQLMDEDYEDEEDDTVGELVPGSSGSVEDNSVQSFPNHQSSVFAVAVHPT # QPLAVSGGEDDLGYIWDITDGEVIVKLTGHSDSVVCVGWSYDGEIVSTGGMDGKIRLWRRVGKENYRSWEFLTELQGPDEVMVSRPPIPSPFTLSSHS # QYKVLEMAPKRKLPTGNTMQVFAGHTGPVQCGTFTPDGMFYLYLTVRSSFIQCILTGKRIVSACGDGTLILWDPRSPTPVFKLTAQDARFDLDGITSL # GVNPSSTLAVVGGAAGGVRVVSLTKGEVVSALGGHTEGESVEAVEFIDLTGAGSGPGVVATGATDGKICLWDLSTMRLRSTVEHSVSYFTQMKGIKLI # VPNTLHLHPRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g274 ### # start gene g275 Scaffold_2 AUGUSTUS gene 1325722 1326045 0.91 + . g275 Scaffold_2 AUGUSTUS transcript 1325722 1326045 0.91 + . g275.t1 Scaffold_2 AUGUSTUS start_codon 1325722 1325724 . + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_2 AUGUSTUS CDS 1325722 1326045 0.91 + 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_2 AUGUSTUS stop_codon 1326043 1326045 . + 0 transcript_id "g275.t1"; gene_id "g275"; # protein sequence = [MEDPAAYAGIIGGDFNAIDDDAEEQIRDLRLSDPGEPSQFADAKEFHTWGFHETKPLKFPTCRMDKIVFTPHGEVTLD # PPVIFGQNAKTEEEEWVSDHYGLLTTFSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g275 ### # start gene g276 Scaffold_2 AUGUSTUS gene 1341931 1342227 0.65 + . g276 Scaffold_2 AUGUSTUS transcript 1341931 1342227 0.65 + . g276.t1 Scaffold_2 AUGUSTUS start_codon 1341931 1341933 . + 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_2 AUGUSTUS CDS 1341931 1342227 0.65 + 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_2 AUGUSTUS stop_codon 1342225 1342227 . + 0 transcript_id "g276.t1"; gene_id "g276"; # protein sequence = [MIDISCIDATQNCDSERVKYLEEERKQVFQEKTVAEIKAERLQRRVVELETELHKLKLRNAQVVSVERPHAPSDEDHE # AKPLAVGADRSIAPPMKNTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g276 ### # start gene g277 Scaffold_2 AUGUSTUS gene 1350692 1351533 0.6 - . g277 Scaffold_2 AUGUSTUS transcript 1350692 1351533 0.6 - . g277.t1 Scaffold_2 AUGUSTUS stop_codon 1350692 1350694 . - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_2 AUGUSTUS CDS 1350692 1351253 0.69 - 1 transcript_id "g277.t1"; gene_id "g277"; Scaffold_2 AUGUSTUS CDS 1351298 1351427 0.98 - 2 transcript_id "g277.t1"; gene_id "g277"; Scaffold_2 AUGUSTUS CDS 1351479 1351533 0.9 - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_2 AUGUSTUS start_codon 1351531 1351533 . - 0 transcript_id "g277.t1"; gene_id "g277"; # protein sequence = [MLFEDEPTDDSHELFDFHAGSEGSILPSDSGSDEDSSDDQDDDIEIPNDMVLIENEIEGDFNRLVQDIRQRNDPSLAK # DWDIKIQDEEQAFKDDLREASGVGKRRKGVCSKLPIHTFYADIFFVETAWIWGPLSQQVRYEAVDLYTKLVGMPNTKKMILKFQITSQSFVAVIDARK # RRIKDPSQESNPTTSNPSTSLFAEKNVKSSSQPKSVDPSAIERAGSRDGEGGITQLQQGEGDMGWDDQGKGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g277 ### # start gene g278 Scaffold_2 AUGUSTUS gene 1360501 1362915 0.15 + . g278 Scaffold_2 AUGUSTUS transcript 1360501 1362915 0.15 + . g278.t1 Scaffold_2 AUGUSTUS start_codon 1360501 1360503 . + 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1360501 1360661 0.43 + 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1360811 1360989 0.65 + 1 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1361194 1361330 0.6 + 2 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1361434 1361667 0.69 + 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1361708 1361921 0.98 + 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS CDS 1361975 1362915 0.84 + 2 transcript_id "g278.t1"; gene_id "g278"; Scaffold_2 AUGUSTUS stop_codon 1362913 1362915 . + 0 transcript_id "g278.t1"; gene_id "g278"; # protein sequence = [MEESISLEETNRIRISIGLKPITDDSNPVDDEEKQAEDNYAKRREHEAKERETKNRRELNASLKGPTLGDADDDTDNV # LKWIKKNKKKEKELAKKRLQEFDRMDKAIQEDYTEQDELQNIEMAEDERQRKNQELKTKKHDYTGYDDDEFVEGNVGMKRAGFRLGSSVVSKKVTNKP # KIETTTSLNKTLLSIDYKSKFSNLRLNHSRSYKIIRESGNYRLSKGGGYRIQKTQGDLNLLTKKKRPNRRVPAEAELAPEDEMDIDPTPVPRVPDLDV # NFVDDDELQAALARSRRAKLAKPKKVTPEELARRVAEEREEQEKKASTKAEDGDIKMGDDEEAGGLVFDDTSEFVRAVGNNPITVKKEPKEKTSPSAR # EFSRPHSLSRDVSMAPGDEVLHEIEAGEAVKDEDDDEEDDMEILNRIEAAIKAEESEQHNAADNAVGTSSEQNFKSGMASTLNILRQQGILAAPSSDQ # KEREHTQLQRDLWLADQRRRVAQRELERLQSRGGNKDQATREYENRLREQQEARENLETFKHYKPDVNIVYYDEHGRALTPKEAWKALSHKFHGKGSG # KMKTEKRLKKIEEEKKQLAMASGDTPLSMSAAFQQRQLKAGQAHFVLSVGNRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g278 ### # start gene g279 Scaffold_2 AUGUSTUS gene 1363033 1363332 0.89 + . g279 Scaffold_2 AUGUSTUS transcript 1363033 1363332 0.89 + . g279.t1 Scaffold_2 AUGUSTUS start_codon 1363033 1363035 . + 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_2 AUGUSTUS CDS 1363033 1363332 0.89 + 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_2 AUGUSTUS stop_codon 1363330 1363332 . + 0 transcript_id "g279.t1"; gene_id "g279"; # protein sequence = [MKKKKESKNAKAAMESGLMTLPTPSLANGGSPAPTGFASVGSNGSPGPRAGFSRISSTVETTSQNGTGTPSERSKVAF # GFGTKRKANEEATGSPPAKRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g279 ### # start gene g280 Scaffold_2 AUGUSTUS gene 1363461 1363778 0.83 - . g280 Scaffold_2 AUGUSTUS transcript 1363461 1363778 0.83 - . g280.t1 Scaffold_2 AUGUSTUS stop_codon 1363461 1363463 . - 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_2 AUGUSTUS CDS 1363461 1363778 0.83 - 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_2 AUGUSTUS start_codon 1363776 1363778 . - 0 transcript_id "g280.t1"; gene_id "g280"; # protein sequence = [MCYEDPKTQHWLKASLDPTFGFPKVARFSLDNGETASRETGTRSAMVCSIPFVLYDETVSNGILQPYRIDEGQESLIK # AFESAQGLDKDRCGLTRELGIRSIATL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g280 ### # start gene g281 Scaffold_2 AUGUSTUS gene 1371346 1372245 1 - . g281 Scaffold_2 AUGUSTUS transcript 1371346 1372245 1 - . g281.t1 Scaffold_2 AUGUSTUS stop_codon 1371346 1371348 . - 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_2 AUGUSTUS CDS 1371346 1372245 1 - 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_2 AUGUSTUS start_codon 1372243 1372245 . - 0 transcript_id "g281.t1"; gene_id "g281"; # protein sequence = [MHYPNYATTPRAFLLSLTSIAPPHALLVAHWGSEGAAALSLPTKEYLQSSAWVEERPPPQPRAARRGRPREDNHLHPD # TSLVSDDVRSVRTGSDFYAGARSNSPSSSAFTARDNSGVYPDFLSAHTTVSEPLTSPNPKSRSRSRGGAGGMSQMSPTATTTTARRYGHDEDELDSSQ # GGTEVTDEDVDDGVVDEVGAQDAFVSGMIYALSRRILPGAPFTPSSHGEADPSASLGENDKNRWRLDECLRQVVYCYSSLGTQKSDNSYLLCRFATEL # AGRKARRRNWVGLADEMERAGWFDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g281 ### # start gene g282 Scaffold_2 AUGUSTUS gene 1373375 1374771 0.14 - . g282 Scaffold_2 AUGUSTUS transcript 1373375 1374771 0.14 - . g282.t1 Scaffold_2 AUGUSTUS stop_codon 1373375 1373377 . - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_2 AUGUSTUS CDS 1373375 1373598 0.5 - 2 transcript_id "g282.t1"; gene_id "g282"; Scaffold_2 AUGUSTUS CDS 1373971 1374107 0.75 - 1 transcript_id "g282.t1"; gene_id "g282"; Scaffold_2 AUGUSTUS CDS 1374165 1374436 0.55 - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_2 AUGUSTUS CDS 1374520 1374771 0.65 - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_2 AUGUSTUS start_codon 1374769 1374771 . - 0 transcript_id "g282.t1"; gene_id "g282"; # protein sequence = [MGRTKTKKQAASKPTIPSSAQPAPATPSIPSLLEKAQSLIVQCDYELAARFIQRILDQQPSNAEAKEMLGVVQLEMGD # IDAAKQTFSSLLPPNSAAPSPPPPSAHLYLAQISDDEPKVALQHYQSAVELLYVQLKGKERAGQNGTSDDEIELKSNIVRALIGQVEIWMDPSYDLCF # EPQAEKTCEDLLETALKVDPDNSEALQSLASVRMSQQRPEDAKASQTHVYIQLFLQLHIHQEHPDKPLLEHTQELIANLEGMGIKPSPPGEGEDEADD # GEWVDDDADSDDGDEDVEMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g282 ### # start gene g283 Scaffold_2 AUGUSTUS gene 1379762 1380679 0.97 - . g283 Scaffold_2 AUGUSTUS transcript 1379762 1380679 0.97 - . g283.t1 Scaffold_2 AUGUSTUS stop_codon 1379762 1379764 . - 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_2 AUGUSTUS CDS 1379762 1380679 0.97 - 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_2 AUGUSTUS start_codon 1380677 1380679 . - 0 transcript_id "g283.t1"; gene_id "g283"; # protein sequence = [MTDLNVVDAASSSGKHSAHSRAATDSPSALRKDRPGSKPNSSNPSNKQWNGYPSFPASASTPSISISPTDSTSKPNKR # FSVASLRGKASRLPPPPVAESRALREYSSSFGWRRGLNDAKGKWEATIPSYRSTSAISKNIFRESAGYSSEVDDDELFSTPRRRFAGSDMGVSGSESS # FSEGTSSTTSSSTSASNSTSATSISALDSPPPLSQKEQLSGAEVLAINRGRLRSAATDARGMRPRSIGHSQPPLVLNSDFSPPSSAQSRASTLSPGKP # RASTSRRGQLRSIPSAIGLPGVDLGHNNPMR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g283 ### # start gene g284 Scaffold_2 AUGUSTUS gene 1384447 1385226 0.54 - . g284 Scaffold_2 AUGUSTUS transcript 1384447 1385226 0.54 - . g284.t1 Scaffold_2 AUGUSTUS stop_codon 1384447 1384449 . - 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_2 AUGUSTUS CDS 1384447 1385226 0.54 - 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_2 AUGUSTUS start_codon 1385224 1385226 . - 0 transcript_id "g284.t1"; gene_id "g284"; # protein sequence = [MAQDAQDLPIVSDTKSSNLNREPTVAGGGTRIASGIVDNGNTELTDEPEQHDITAHPNGSEGWLPATDLPPPSDGATS # PSFQPARSGSVLKKRRPGSIASRASSVRGGVISDGVERNRSTRSVESTRSRRTMLTNADGKPVNGSAFINGAGITGPSATATADDSLHQRMQSADDAL # TGKQKKKIGKVEGWSFAYYQTRSCILKLSTVKQSQRLSKVIKSESKVDKQSMDIAIQELGELQKVQKSLVKVRAFLIPYKDHD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g284 ### # start gene g285 Scaffold_2 AUGUSTUS gene 1390955 1391273 0.46 + . g285 Scaffold_2 AUGUSTUS transcript 1390955 1391273 0.46 + . g285.t1 Scaffold_2 AUGUSTUS start_codon 1390955 1390957 . + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_2 AUGUSTUS CDS 1390955 1391188 0.64 + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_2 AUGUSTUS CDS 1391262 1391273 0.46 + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_2 AUGUSTUS stop_codon 1391271 1391273 . + 0 transcript_id "g285.t1"; gene_id "g285"; # protein sequence = [MIEPTVSDLDYEYPANTAQGQGFSDLITELRTAFNNLAAQKGDSTPYELTAAVSANASNYQWLNIPQVDAALTYWNLM # DRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g285 ### # start gene g286 Scaffold_2 AUGUSTUS gene 1392260 1392457 0.56 + . g286 Scaffold_2 AUGUSTUS transcript 1392260 1392457 0.56 + . g286.t1 Scaffold_2 AUGUSTUS start_codon 1392260 1392262 . + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_2 AUGUSTUS CDS 1392260 1392457 0.56 + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_2 AUGUSTUS stop_codon 1392455 1392457 . + 0 transcript_id "g286.t1"; gene_id "g286"; # protein sequence = [MVEHCLLLGESTGSSTTAPTSTSTTCCSSSSTGTGTTTSTGASPTGACGSAAAWSSAVNLQQPKY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g286 ### # start gene g287 Scaffold_2 AUGUSTUS gene 1404537 1405105 0.43 + . g287 Scaffold_2 AUGUSTUS transcript 1404537 1405105 0.43 + . g287.t1 Scaffold_2 AUGUSTUS start_codon 1404537 1404539 . + 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_2 AUGUSTUS CDS 1404537 1404714 0.43 + 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_2 AUGUSTUS CDS 1404813 1405105 0.66 + 2 transcript_id "g287.t1"; gene_id "g287"; Scaffold_2 AUGUSTUS stop_codon 1405103 1405105 . + 0 transcript_id "g287.t1"; gene_id "g287"; # protein sequence = [MFDVLDELIGPLTTHISTTLSQPISGSDEQRMHVEIKKAYIGLLTSVMSTKLQGVFISPPEDTSDPPNQRAAFNLLSR # CVAVWAQPNPTPPAANGNSNHNPLNDMGIPGFERFIYERLVPTAFGVPSLPNLNLKDGQVTVVSHPQYLFELNLNESR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g287 ### # start gene g288 Scaffold_2 AUGUSTUS gene 1412481 1413944 0.25 + . g288 Scaffold_2 AUGUSTUS transcript 1412481 1413944 0.25 + . g288.t1 Scaffold_2 AUGUSTUS start_codon 1412481 1412483 . + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_2 AUGUSTUS CDS 1412481 1412925 0.25 + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_2 AUGUSTUS CDS 1413307 1413944 0.75 + 2 transcript_id "g288.t1"; gene_id "g288"; Scaffold_2 AUGUSTUS stop_codon 1413942 1413944 . + 0 transcript_id "g288.t1"; gene_id "g288"; # protein sequence = [MHSAKSKSKGVSTSSLFDLKAEISKKEDEFARDKAAGKTYTLGRVNRPDKVVTLQITALQLAQLSQQKPTKWSLPNKG # VQSRAARDLVEQESVSKPTLENARISLERKSVKYHQLVKGKTAGLTEKQYDALLVDVRWSVLSLRYLGLKXNAQILQNHFPTYQHTEDRITEIINEHS # EENNPLEKHYDPNSEIRDRGAASYTFSTDEETRQARLNELKSRHLETDAIRKEMGAVDVLPGEIEGMQVPEVRSSVKGSEKRKREMEERRKMLDAKRK # KVGTRTVIEEPQPDTVSASTSGTTTSLKRNSQTPGLPQQVDPFSALESATFSKPPPNKGKGKSSSQHDADEFLAQLGNEMLNKKRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g288 ### # start gene g289 Scaffold_2 AUGUSTUS gene 1416332 1417297 0.84 + . g289 Scaffold_2 AUGUSTUS transcript 1416332 1417297 0.84 + . g289.t1 Scaffold_2 AUGUSTUS start_codon 1416332 1416334 . + 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_2 AUGUSTUS CDS 1416332 1417297 0.84 + 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_2 AUGUSTUS stop_codon 1417295 1417297 . + 0 transcript_id "g289.t1"; gene_id "g289"; # protein sequence = [MQITRQGPLPNDPSIISANRTRKTHKDAETISRISKLPIESKLRINFNKQTRNASRRERVFEGNDDVSDVSSYLSIPE # VEYDKMLKDQDYFDKVKAWLSAHTISWLVDRRKSLRLRPREGDDTSVEASGTQPSKRFRSNDDLIEIDPTSPPNVFFDQAFLDLGLYGYHIPLALFTN # KNVEFLNNNSISFHRTKISHIEGKPQILDLADVIKKVKGSREGGPTQDLAIEHFEWLEATANFFVYQSLLYAEGDEANEPQFYRKHFGSSRINRLSQT # VLTCGRTSSSSFVRNIKTKKLISTSSITEQNGAALNHVLTPLKPLPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g289 ### # start gene g290 Scaffold_2 AUGUSTUS gene 1425789 1426725 0.44 + . g290 Scaffold_2 AUGUSTUS transcript 1425789 1426725 0.44 + . g290.t1 Scaffold_2 AUGUSTUS start_codon 1425789 1425791 . + 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_2 AUGUSTUS CDS 1425789 1425980 0.44 + 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_2 AUGUSTUS CDS 1426180 1426725 0.49 + 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_2 AUGUSTUS stop_codon 1426723 1426725 . + 0 transcript_id "g290.t1"; gene_id "g290"; # protein sequence = [MELPDEILTQIFDLAADEDVIFQYGLPTVMAETAWFQNALDEWALRSPQEAINIIQRRSYATKKSSVGLGWWTKRIHL # TRYYASPNRGASQDDMCNALTTIVKHCPNLSIFVVEWPMPSATFGLVADSLFKYTRKALHTVHWHVSAEAIPKIIWALDSLPLVLAAHIEFDPPTHTT # EIHESLHLGSAQNVALNLPYLQQLTYAEASSSRLWIGFFLDCEISLLIAAIVDPRHLTLLVSSRDMGIN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g290 ### # start gene g291 Scaffold_2 AUGUSTUS gene 1427230 1427664 0.99 + . g291 Scaffold_2 AUGUSTUS transcript 1427230 1427664 0.99 + . g291.t1 Scaffold_2 AUGUSTUS start_codon 1427230 1427232 . + 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_2 AUGUSTUS CDS 1427230 1427664 0.99 + 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_2 AUGUSTUS stop_codon 1427662 1427664 . + 0 transcript_id "g291.t1"; gene_id "g291"; # protein sequence = [MDRWERWWDRCHESNIRLEDCTGGEFGQLPLDAEEENIEEEEEEEEGDGQANDSEEYSSEGYSDEWEVEVPSIEENDD # GLHTQELRQLIKECQAMAEERDESPFSGFIGPAFNLSSSMSSATGHSSAIADESTLLPRPVQLQAP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g291 ### # start gene g292 Scaffold_2 AUGUSTUS gene 1433183 1438491 0.37 + . g292 Scaffold_2 AUGUSTUS transcript 1433183 1438491 0.37 + . g292.t1 Scaffold_2 AUGUSTUS start_codon 1433183 1433185 . + 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_2 AUGUSTUS CDS 1433183 1433840 0.37 + 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_2 AUGUSTUS CDS 1433960 1438491 0.94 + 2 transcript_id "g292.t1"; gene_id "g292"; Scaffold_2 AUGUSTUS stop_codon 1438489 1438491 . + 0 transcript_id "g292.t1"; gene_id "g292"; # protein sequence = [MNFPQVAQSPTLASGFRIRREGLRSAEKAIPTQRAEDTVFPAPPDSPISHPAEPSQVSSIQSPVSSPSTHLSSDDDSM # TTRVNESGRIELSSGKNGPRVKPGSVLSPEDLDDLYEDARRYAKSRAKDDIENVRDVIAEAFSARVHRDWFRSEKNVHLSLALESTDAADPAAPSTFP # FLDVLRRKFCGHDWAQVHAARRDDLRMSVGGGAVLTSTFRKSRVDEETTYKSWVSACRDLEVRFKSRLSSADRQGHRGAFPYNNSYAASNNNNSVHKR # NATTEPSSYPNKRPSSAAGSTTNTGSGGVFYMKSFKSMPEALQKEQRELLGRISACPKCRTAWATCGSNLDNCPGATLSVPWRPLTNEMVDWAISAHK # STNRPILYNAILKQAAGKVPVASIHGAPLEDISAYVDSGENRAPVAAAIYGTFPVSHIVRDTEVYGSFAGPALRSHSGASSTRANVVAPVVGQYRVTR # DDRDDEVDWSDGSASPCPKPGGGDIVEPREPSVEVRDDSQMPFELPHFVWNATLRGPASSVAHPLLIDDGCPFVLIRADVATALGAKLRRLHKPQQMS # VAMSEGSPQIFTASSFCKVGLEDPSGSWSSRSVRALVVPSLCFPMVLGIPFLAHNFLVTDYSSRTVMDKTTGFDLMNPSVPCPRPPCTSPAQRRRIVI # DTYENTLELKKTVLLELKGYVRDHPHLTLSDPVRPIDVAAAVRARVEQLSELERLAELGDGIKKQFADVFGDIPHLEELPTDITCKISLKDANMTMQS # RGYASPRKYREAWSVLIEKHLQAGRIRPSSSQYSSPAFLVPKSDPTALPRWVNDFRKLNANTVPDRHPLPRIDNILADCAKGKIWGKMDMTDSFFQSR # MDPASVPLVSVQTPLGQYEWLVMPQGLRNAPAIQQRRVTQALREYIGRFCHVYLDDIIIWSKDEVEHARHVELILQALREAKLFCNPKKCQFFQLEID # FLGHHISQRGVEAQHHKCEAIINYPSPSSASDVRRFLGMVRFIAGYLENLAEYTRVLTPLTKKECDKSFPGWTIEHEHAFTNIKTLVLSRQCLTTIDH # DNPGDNHIFLVTDASDWRHGAVLMWGPTLQTARPVAFDSAQFSGPELNYPVHEKELLAIIRSLRKWRADLLGMHIHVLTDHRTLENFESQKDLSRRQL # RWQEDMSQFDLEIAYIPGEMNSAADALSRIKAGALPSDFPASDLSAGASQNVDAWKLNPFVCSSVLSLSADAAFLSHIKEGYDSDPFVKKLIEGGSLV # PGVEHRGGLWFIEGRLVIPAYLSLREDLFHLAHDTCGHFGSDKTYAMLADSYYWPNMRRDLYKYYIPGCDDCQRNKGRTAKNGKGPLHPLPVPEGRCD # SVAMDFIGPLPLDQGFDCILTMTDRLGSDLKIIPTNIDITAPALARIVFDHWYCDNGLPSEWVSDRDKLFVSEFWSVLNKLSGVKIKMSSSFHPETDG # SSERSNKTVNQAIRFYVERNQVGWVNALPKIRFDIMNTVNASTGLSMFQLRYGRSPRVLPPLVSVESLNLPDPSSNASDAHDFLAGVATTVREARDNL # TLAKVVQAYQADKLRGPCEIFEAGEFVMLSTWHRREIFKKSGEKRVAKFFPRFDGPYEVLKAYPETSHYTLDMPNHPNAFPSFYVDQLKRYVPNKSDL # FPGRRRDIPEPTIVDGFEEFEIDRILDSRRRGRGWQFLVRWVDQGPSEDRWLSYSSLHNCEALDDWVRNGGDGPPVLLDSVDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g292 ### # start gene g293 Scaffold_2 AUGUSTUS gene 1442776 1443135 0.79 + . g293 Scaffold_2 AUGUSTUS transcript 1442776 1443135 0.79 + . g293.t1 Scaffold_2 AUGUSTUS start_codon 1442776 1442778 . + 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_2 AUGUSTUS CDS 1442776 1443135 0.79 + 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_2 AUGUSTUS stop_codon 1443133 1443135 . + 0 transcript_id "g293.t1"; gene_id "g293"; # protein sequence = [MSSTSTSTAHITVLYFAAASTTLGITEEKIPIPEKGFYLSQLKDLLVERHSRDNPSKDDGSGKKGGGGGEEKIGEALR # KVLDSSQWSVDAEMVDDDEDLTKVELGDGVEVAVICPVSGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g293 ### # start gene g294 Scaffold_2 AUGUSTUS gene 1443195 1443983 1 - . g294 Scaffold_2 AUGUSTUS transcript 1443195 1443983 1 - . g294.t1 Scaffold_2 AUGUSTUS stop_codon 1443195 1443197 . - 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_2 AUGUSTUS CDS 1443195 1443983 1 - 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_2 AUGUSTUS start_codon 1443981 1443983 . - 0 transcript_id "g294.t1"; gene_id "g294"; # protein sequence = [MITAARHRTDTQFDNAPSLYEDGSPMWSILVRSDVAKQIAALEKVEREEETKIRRERKERADMAAAQAAALAAQSASA # MNGGAGGSGGGDDDLDGFGGGGGGKKKRKKDGPGVTAKNMSVDVQKKMSNAAASHAAGLAGRYSWMTAGASSTGSSTPKKTVVAAAPAAATTTTTTPG # ALSSSLTGAGASAASTTATLSTPSAGGNSSGWARPYVSAKKTTETNTTQEIVEGDTRTAITMRDAMFVIEKERGHGGGRGAAKGWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g294 ### # start gene g295 Scaffold_2 AUGUSTUS gene 1445053 1445469 0.55 + . g295 Scaffold_2 AUGUSTUS transcript 1445053 1445469 0.55 + . g295.t1 Scaffold_2 AUGUSTUS start_codon 1445053 1445055 . + 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_2 AUGUSTUS CDS 1445053 1445469 0.55 + 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_2 AUGUSTUS stop_codon 1445467 1445469 . + 0 transcript_id "g295.t1"; gene_id "g295"; # protein sequence = [MSQDKDSSAFAATRLTSNTFLIKEYNDIYSEHPHIYAIIFPSTSNLSNISNTSESSSKVGHNMAGTIILIDTGCGGAS # NDPEVRVTNVREFIETVDVPENGGRPLNGLDNQSGLEGGKRMGYIVVLTHCHYDHIRKSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g295 ### # start gene g296 Scaffold_2 AUGUSTUS gene 1447723 1451920 0.15 - . g296 Scaffold_2 AUGUSTUS transcript 1447723 1451920 0.15 - . g296.t1 Scaffold_2 AUGUSTUS stop_codon 1447723 1447725 . - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_2 AUGUSTUS CDS 1447723 1450986 1 - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_2 AUGUSTUS CDS 1451157 1451519 0.82 - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_2 AUGUSTUS CDS 1451596 1451729 0.72 - 2 transcript_id "g296.t1"; gene_id "g296"; Scaffold_2 AUGUSTUS CDS 1451830 1451920 0.15 - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_2 AUGUSTUS start_codon 1451918 1451920 . - 0 transcript_id "g296.t1"; gene_id "g296"; # protein sequence = [MFGCFFKDKPHAAMNVDADGRRLPVDSPIIVTGNSAIKPNTTNVVNHDQMSISTGPVAADTSRAEESNAEEPIRMGSQ # LAAIKTKQPPSAFSRVPLSQIDAIEGVGVNVRDSMITQESEQTNISTVYPLSTLSSATASPRSPTFSERSVQVDDFKSFEEDDVSYRLRLLVNNNYFL # PPAHSKPLPAQLIPATNPNATAVSSSSSSAPPRTSNLGRQPDRSGRVVVVREKMADLASAAKQAEFEVKIRSLQRDTRREQAVNLPSMDDVIDPTDAV # DLPLPSSAYPFAVQTSALHGLGVHESVGAAALASRLPPPRDRSSALSSLGPDDDEEDWKKALLKAAVGHSFDNLTVAAEGALARSPRSPRSPSSSMMS # SLPPGSPAPSPVPITSAPVPAARINKKIISSPIQLDTSLSKSPSVHSASHIQTHAFTNHSRPRGWSSPASPTSPSSAPSPIPIRTETPLDLMPLMPPP # RSPKSPRSPKSVKREIINPVYSISQTDLTETAGPAAASVSQGWNGGNTNHIYTMTPPPGYWRSGGLGMTPRDSSESSQSSFRPRDSSDRETTNSNTSR # SRRTAGSGVADPETPDSISMYSTVTGVFPDEENENLPRASSSRSTITSTAQSPTTSAFQDALSRNPSELRIDGDGHAHQQSTDPPPVPSLAGPTDGTS # APSASVSSPFQPLEPIERSAPAAPASPRPPSASSLPIPSTSLTPATPVSAPSRTTSLHYRDLRNRHFSALMQNNTLPTYASYLSNPPSAYNTNMPPPP # TLAHRSASDHGHGTFTPPPPALRKRPPTAPAAPILTPRIELIEISAPEPTTPPFPSFASLPSFPSLPTIRSPSSPSSARSVHSARSAPPSPPSPLSPL # SSSYPSSQSPSSLPSQSQPSLIERRHHGVGNPLRGSLHIPTSIIPPAIHSAPPPATPPSFSSSLPLFAGPSSAGPSSMMMMTPPSSSMSFFDTIQTQP # NAMDYLDESSDESSDDDDEDEDEDECEYDNEGDENRAGNENIEKDDDNHDDEGEEDFRTAEGGTTAGSGRERGASVTNSMLSSLSAYSTSSAQPTARR # PSTSRSNISSHSNLSNHSNRSNFSIRTPLMRLGNHSTPYVSHTSLHASDTGIDRRLPIGNIAESKSPREFFTKKMRDDEQVLESKWDLWKYTRVGQGE # GVRADVVTGSGVGTGTGTDIVGTGAEIAGEVEVAAGPSSRSYSYSYSSHPYARAYGPHHSRNYSRDAPSSFAGISGSSGTAAGGSRIRATSSSSDRGY # GYGYGSQTQTQQAQTQAQQKMESKSWTGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g296 ### # start gene g297 Scaffold_2 AUGUSTUS gene 1452682 1453928 0.32 - . g297 Scaffold_2 AUGUSTUS transcript 1452682 1453928 0.32 - . g297.t1 Scaffold_2 AUGUSTUS stop_codon 1452682 1452684 . - 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_2 AUGUSTUS CDS 1452682 1453277 0.6 - 2 transcript_id "g297.t1"; gene_id "g297"; Scaffold_2 AUGUSTUS CDS 1453355 1453928 0.34 - 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_2 AUGUSTUS start_codon 1453926 1453928 . - 0 transcript_id "g297.t1"; gene_id "g297"; # protein sequence = [MEWVCGFGKLEDLLFYGHHRGEKRGRRAAFMERGEGEGLIRDIEEPATTEEESPWGWGHSEGGRIFDLNEAPEVMDAR # GRAKIRLPLNIRRLRLDLPGPALEAVLRWLLAHRSSGSTEVKSKSHSDRSKEEIEAQREGGSQGSIEGVPGVSTLHIFRVMDDEMPALRAYLCACKDT # LEDLMMFLYQGHRKRDDFDRSSHTGLRSVYLASNGSKPMRVLHDILSTLQALPTSQMRKIYLQIPQWQLASDDDAWGTLDGLLKGLLESSGKELKISA # IVDGRHKYDNSNENEEDVTFGLRCKLRERLPLLTSFMSPIGSARSLDKARNEKQDNSRFTILSNSTREMAQYVDEVFGHEGELDPSMTYIVDLRVDLH # FPDILNCKRQLFWDSDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g297 ### # start gene g298 Scaffold_2 AUGUSTUS gene 1460231 1460716 0.69 + . g298 Scaffold_2 AUGUSTUS transcript 1460231 1460716 0.69 + . g298.t1 Scaffold_2 AUGUSTUS start_codon 1460231 1460233 . + 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_2 AUGUSTUS CDS 1460231 1460716 0.69 + 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_2 AUGUSTUS stop_codon 1460714 1460716 . + 0 transcript_id "g298.t1"; gene_id "g298"; # protein sequence = [MSTAAQTAASTLSSRYPQYLSLQNYINLLQLHAQTHSKQSVKDITYARTLLRKLRPEELRAYLNTLIPKFQELQNDLG # VDIPTGDDDGEESSNLNLAEVVRMLEEWRSEAEEVYRAYETVETGTRERNMNEAAVEKFKLLKENLAEWMYEYLGYALFIILP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g298 ### # start gene g299 Scaffold_2 AUGUSTUS gene 1469932 1472121 0.4 - . g299 Scaffold_2 AUGUSTUS transcript 1469932 1472121 0.4 - . g299.t1 Scaffold_2 AUGUSTUS stop_codon 1469932 1469934 . - 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_2 AUGUSTUS CDS 1469932 1472121 0.4 - 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_2 AUGUSTUS start_codon 1472119 1472121 . - 0 transcript_id "g299.t1"; gene_id "g299"; # protein sequence = [MQRRTNKRTNKRTPKKVHPTPPTHRTPPTHHQNPPSAPNSDVPNPRTSPPKPNLPPTQRVRSLSYSEIPTNPLSSIPS # LASPSLLGKTVDLRARIHTIRAVSASLVFILLRQQLDTIQGVLSVSVGDTDAGPTEHMVRWGSRLEEESIVHVQGVVQRPKDGQVHSTSIHNLELRIV # ELHVVSGVAEPVPFSVYEADLSAAASSSGKEEEDEDEEERLMPFIPDRSRLASRIIHLRSASAQSIFRIQSTVSMTFRSHLSQLEHLDGTGLDFVLSL # KDIFPPSSISIPGGFMEIHTPKLQGGASESGASVFKLKYFSRLAFLAQSPQLPKQMSVSADFPGVFEVGPVFRAENSNTKRHLTEYTGLDVEMRVGRE # YHEVMAVVDGVLKAIFGSVYAQRKREVEVVKGQGGGGEDLVWLDRTLVMAFADGVQMLIEDGYVEEDTGCPPRKDQDLTTRAEIRLGQLVKSKFHTDY # YILDLFPQSARPFYTMPADPTTQSHLNTLHPTCGPLTHSFDIFLRGQEITTGGQRIHSYPHLLHSMSLLDISPRGLEEYLDAFRWGAPPHGGAGIGLE # RLVMLILGVKDIRYTSMFPRDPRSLMEPPKGLEGVRHLEADTLGVAQPTPIQCICRPRGGSPTPTSTTPTPVVGLSDLSLESTSTSSTTSNHPRHPPH # RIGPSPLHQSLLPGSQQPTVPTKRRSLPTIPALIANYGDAANTSWLDDRYLVWRDGSTGAAIG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g299 ### # start gene g300 Scaffold_2 AUGUSTUS gene 1478544 1478922 0.56 - . g300 Scaffold_2 AUGUSTUS transcript 1478544 1478922 0.56 - . g300.t1 Scaffold_2 AUGUSTUS stop_codon 1478544 1478546 . - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_2 AUGUSTUS CDS 1478544 1478575 0.9 - 2 transcript_id "g300.t1"; gene_id "g300"; Scaffold_2 AUGUSTUS CDS 1478652 1478922 0.56 - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_2 AUGUSTUS start_codon 1478920 1478922 . - 0 transcript_id "g300.t1"; gene_id "g300"; # protein sequence = [MLLILCIGCIVTDIPISILSRSMQSLSMGEENEQSNDAIEPSRARPLGRPAPTVQGAQPQVQMTPNRNTKRFITDLNS # SDWETPNFGGFPERGWSRCKTI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g300 ### # start gene g301 Scaffold_2 AUGUSTUS gene 1479439 1480156 0.34 - . g301 Scaffold_2 AUGUSTUS transcript 1479439 1480156 0.34 - . g301.t1 Scaffold_2 AUGUSTUS stop_codon 1479439 1479441 . - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_2 AUGUSTUS CDS 1479439 1479867 0.8 - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_2 AUGUSTUS CDS 1479929 1480156 0.35 - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_2 AUGUSTUS start_codon 1480154 1480156 . - 0 transcript_id "g301.t1"; gene_id "g301"; # protein sequence = [MQAMDILDQEASEDESTRENLPIPLTRPPSHEANVHLVDKERRYRTILDQAATGDETIRTKWDQWERNITELTWDEAD # LEASIPSSTLSTSSYPSSSSSFSTDKHARTLRSLLESLSELYTDRDNLIRRASALAEADDIQPRIVKAAAGFERLGLETAESTGTPYSELAQKHTTHP # AMFEDISNGELAKYDKFMQWMRDLEGKQEEILGSIKASFRRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g301 ### # start gene g302 Scaffold_2 AUGUSTUS gene 1485267 1486358 0.72 + . g302 Scaffold_2 AUGUSTUS transcript 1485267 1486358 0.72 + . g302.t1 Scaffold_2 AUGUSTUS start_codon 1485267 1485269 . + 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_2 AUGUSTUS CDS 1485267 1485413 0.72 + 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_2 AUGUSTUS CDS 1485669 1486358 1 + 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_2 AUGUSTUS stop_codon 1486356 1486358 . + 0 transcript_id "g302.t1"; gene_id "g302"; # protein sequence = [MLQNLANKPLYAKEAYMMTLNPFVENNKARINQFLNNLCEVGDFYDTLETNSALLPLKFRARKTGQLNCLSIAVGRLL # CHDLQSALMDSVSSSDMLYMETKSIFVQLIRSIPNAPEKRPYNLAAIAERAATTKDATLVRKGIKVKEMLRELEEQKIIDQGDGYKLMQEEVAAELVH # LGNLREKVLLETKSLEAVYKTIGDHNNYLRSQLEQYKAYLQNVRLTATKDKGSTTGVGVVTVGGKEKKPAKSVVLGPYRFTHAQLEKEGIIVESNVPI # TGMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g302 ### # start gene g303 Scaffold_2 AUGUSTUS gene 1488581 1488943 0.5 - . g303 Scaffold_2 AUGUSTUS transcript 1488581 1488943 0.5 - . g303.t1 Scaffold_2 AUGUSTUS stop_codon 1488581 1488583 . - 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_2 AUGUSTUS CDS 1488581 1488943 0.5 - 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_2 AUGUSTUS start_codon 1488941 1488943 . - 0 transcript_id "g303.t1"; gene_id "g303"; # protein sequence = [MKSRRNTWDRVDRGHHVHAWPFLSNSIMVYSRFNEKETSPNPYINFITSLPAEDNEDARQFLRALAAQVRPIMKAHGL # TVNSLEEYEYNAVFAGRNWESGETIGAYLLELSSFIDAHNLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g303 ### # start gene g304 Scaffold_2 AUGUSTUS gene 1489105 1489539 0.25 + . g304 Scaffold_2 AUGUSTUS transcript 1489105 1489539 0.25 + . g304.t1 Scaffold_2 AUGUSTUS start_codon 1489105 1489107 . + 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_2 AUGUSTUS CDS 1489105 1489539 0.25 + 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_2 AUGUSTUS stop_codon 1489537 1489539 . + 0 transcript_id "g304.t1"; gene_id "g304"; # protein sequence = [MNAVVRRHVKVGILKQVYNLTSYLLSLTNFTRGCETWVVREGYEGLVRGNTEALSEQSLDEEPVDLPDNTSPDGTSFN # LIHNLRFGDGDLLKDGTGDHPGTRSLKGRYIVRVGFDDVRAWFAEVRRFPGILEHCAVMVKDREEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g304 ### # start gene g305 Scaffold_2 AUGUSTUS gene 1490459 1491479 0.2 + . g305 Scaffold_2 AUGUSTUS transcript 1490459 1491479 0.2 + . g305.t1 Scaffold_2 AUGUSTUS start_codon 1490459 1490461 . + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_2 AUGUSTUS CDS 1490459 1490569 0.21 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_2 AUGUSTUS CDS 1490626 1490763 0.79 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_2 AUGUSTUS CDS 1490835 1491479 0.72 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_2 AUGUSTUS stop_codon 1491477 1491479 . + 0 transcript_id "g305.t1"; gene_id "g305"; # protein sequence = [MEAVETLLEATPTSPSYMIGIQENKITRVPLMEAVAMTRAVSAAIEAKDFEKAMSYRDPEFKESFEGFLKISTLDQEK # VPEEQLPLCSKCSTELQVVQILWLDSMGAPAGGMNAATRAAVRYCIRHGHTPIAVHNGFRGLLDDEVHELSWLGVDSWTARGGSELGTNRTLPSVDLG # AVAAKFQEHQFHALLMIGGFETFNSLLIMEEGRRHYPAFHIPMVHLPATISNNVPMTEWSLGSDTSLNALVDACDAIKQSASASRNRVFVVETQGGKC # GYLATVGALAVGQRFIYEVICRY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g305 ### # start gene g306 Scaffold_2 AUGUSTUS gene 1491716 1492105 0.41 + . g306 Scaffold_2 AUGUSTUS transcript 1491716 1492105 0.41 + . g306.t1 Scaffold_2 AUGUSTUS start_codon 1491716 1491718 . + 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_2 AUGUSTUS CDS 1491716 1492105 0.41 + 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_2 AUGUSTUS stop_codon 1492103 1492105 . + 0 transcript_id "g306.t1"; gene_id "g306"; # protein sequence = [MLKEEGGTLFDARSASLGHTLQGGVPSPMDRARAVRLSLKCMAFLEREHVKLLQQPVKARHATPDSAAIITIQSSSLK # WVPVQEMVAHADMQNRRGKNPWWANIKELAELLAGRPQLIGIHSKDLAQYE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g306 ### # start gene g307 Scaffold_2 AUGUSTUS gene 1497141 1498034 1 + . g307 Scaffold_2 AUGUSTUS transcript 1497141 1498034 1 + . g307.t1 Scaffold_2 AUGUSTUS start_codon 1497141 1497143 . + 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_2 AUGUSTUS CDS 1497141 1498034 1 + 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_2 AUGUSTUS stop_codon 1498032 1498034 . + 0 transcript_id "g307.t1"; gene_id "g307"; # protein sequence = [MFRAAFPKADEQSEKDEVQWVKDNYDLSGNNGSSKDTSITRLAGTWVGPELARELGKSYLLDDLISLVVDARPDPNGN # YRRSGKGAAATPRPPSSTDSAVNNQASATSPSIAPNPSKRRKESSPVPAPPPSPPPERRNPLRRSNRTKSPAPKVSVLPLVKTPSRKAVRREVKEEEV # VTPGGSDETAVDEDAQAVEDVAGEQLHQQDIEEQKVLIEGLKAKRNAAMKASDGDIDGSEKSVVKRVREEEEEALRFNFKEPEVGERAISTNRRVDGY # FEEPRHKSLAWGVVAFAFGMGAV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g307 ### # start gene g308 Scaffold_2 AUGUSTUS gene 1506720 1507545 0.71 + . g308 Scaffold_2 AUGUSTUS transcript 1506720 1507545 0.71 + . g308.t1 Scaffold_2 AUGUSTUS start_codon 1506720 1506722 . + 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_2 AUGUSTUS CDS 1506720 1506852 0.71 + 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_2 AUGUSTUS CDS 1506996 1507022 0.88 + 2 transcript_id "g308.t1"; gene_id "g308"; Scaffold_2 AUGUSTUS CDS 1507079 1507209 0.99 + 2 transcript_id "g308.t1"; gene_id "g308"; Scaffold_2 AUGUSTUS CDS 1507258 1507545 1 + 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_2 AUGUSTUS stop_codon 1507543 1507545 . + 0 transcript_id "g308.t1"; gene_id "g308"; # protein sequence = [MPAKKNRDKGDKSAAIADPTPAASEPEGPPPPEPRPPVRVLYCGEAYSKYYSDEALQAKIGTLSLEAQSKLEQETAKK # EAKAEAKADAALKKKLASQVTIKRIERNKRKHVTSIHGLEAFNIDLKKAAKQFASKFATGASVTKNPQGLEEIVVQGDVSDEVLEMIEGEVGILKGIP # ADNVEIIEEKKKKGGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g308 ### # start gene g309 Scaffold_2 AUGUSTUS gene 1508280 1509901 0.47 - . g309 Scaffold_2 AUGUSTUS transcript 1508280 1509901 0.47 - . g309.t1 Scaffold_2 AUGUSTUS stop_codon 1508280 1508282 . - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_2 AUGUSTUS CDS 1508280 1508486 0.99 - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_2 AUGUSTUS CDS 1508538 1508885 0.98 - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_2 AUGUSTUS CDS 1509026 1509901 0.71 - 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_2 AUGUSTUS start_codon 1509899 1509901 . - 0 transcript_id "g309.t1"; gene_id "g309"; # protein sequence = [MFQRVSLLKMGGTYKNENTTEPAEVVNAVGAEEIHSEVGAEDSLNPSANTTEIDRPKSPWTPSYSVISQGPDMASEED # IPEIQQLPSSNVPAGQELPVPEVNIIPEVSEATVANVSSMVYGAAVLADTYNLQLEEPKESSRPSSPWVPSYSVSVQGSPSVSAHSSPVLAATELSEN # VIPVIELSEESAEPASPVSAEVSALNNAAESIEEPGLEVDSLPSKPPVDSVIHDENSVIPSVNITETSSESSLDIPLESTEVDIAQKPMQDQTVNTVS # PVQQPLVVNEMLDQSGDEDTPVFKVPDEEAIVDLSAKPYKDVQIPGALSLSPSQSVVAAQIERPKSPWGSYEVTNQSGHETSVAEMADPEAVEAVEDI # PAPTSFIRDEPVAEPADEPTLKDVSTEDAPAAEVSKLTVDTTENDLPERPKSPWTPSYSVSRQGSQVFNEARNDAELDTLEQPPPHAESSTVSPHSIY # VLIEMY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g309 ### # start gene g310 Scaffold_2 AUGUSTUS gene 1510317 1511950 0.63 - . g310 Scaffold_2 AUGUSTUS transcript 1510317 1511950 0.63 - . g310.t1 Scaffold_2 AUGUSTUS stop_codon 1510317 1510319 . - 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_2 AUGUSTUS CDS 1510317 1510542 0.98 - 1 transcript_id "g310.t1"; gene_id "g310"; Scaffold_2 AUGUSTUS CDS 1510596 1511950 0.64 - 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_2 AUGUSTUS start_codon 1511948 1511950 . - 0 transcript_id "g310.t1"; gene_id "g310"; # protein sequence = [MNGQSKSEIVPALEESSVIPDKFSETAYEVAGESEAKLITESDVLGVILATGNVDTVSADPNAETTPPISGEEASSVE # LEKQLAENVGTPNEVILSDGEKLAANNENTNTSSVEEVPFARDEDVGPLLEGHPSWINENLATKDESNKPESVLDTQQLDVKPDEKEPDIGFDHNLDV # AETVVDSAASATQILETGTEQHLMTETGGIMLTNEDADSAAVADVVVAPASGGAGGEGAQVFSGLVEESSPSDTTVEGTIADDKALLKGESIANLPQD # EPVDLFRENSSALVEESSNADPATSLTGSVVKDHSTDTVVQFLSSGEAVSDASINQSTEMEEQPVLEPQNQANQCSEVPQDEAADDSDDPTNEAVPAA # APEAPFAEDIVPAITDTADSQDEFSSDTLGLEKPSLDQEIQLTELTTPSESAQIDVEKLWKSCPILLMLGLPLKIAPTSAVSNQGPDVTREEDISEIE # QLPISDVATSAESSVPMVNIVPEESEPTAKIVPEESEPTAANVRLKPHDTVFFLRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g310 ### # start gene g311 Scaffold_2 AUGUSTUS gene 1512073 1513672 0.8 - . g311 Scaffold_2 AUGUSTUS transcript 1512073 1513672 0.8 - . g311.t1 Scaffold_2 AUGUSTUS stop_codon 1512073 1512075 . - 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_2 AUGUSTUS CDS 1512073 1513200 0.92 - 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_2 AUGUSTUS CDS 1513490 1513672 0.8 - 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_2 AUGUSTUS start_codon 1513670 1513672 . - 0 transcript_id "g311.t1"; gene_id "g311"; # protein sequence = [MSATEVVDNGAAVFDEANHPPTSKPKVLSERTGDEDNHSLNDVEVERDPIIEFDTSEIPLEDDEIPLKDPTDPLATLE # ASDSPLQLFESPNTASHNEFEATEPKSQTEKSGDRGVDSTGTGTIASGIGRVHEGEEPQLEVEQVPLIREPVFRDADSALEAETLAQNLPEDTTKPIN # GNPVNLEPDGPLPGVAALQTSSSVDSAALVDAAEETVLGTGVAEERATKSSFAEGAEDPISNVHGSISVIPDTVSGEATGVSHVNVLAVSTSSEETPN # SVTPVLTDPIIGGEESTVGNIVTDGSSGEVQVHSTERIESEKHMHLDSNVREHDLTSPAEPAESHSNELGSSAAILVDEKPGADIVLGYPEDNAEGSH # AIPVEALTIVSAAALQHSVSSPLVEPTQIETGQLSLTLGNSEDIPTGKQRPGISTTNLLWRKCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g311 ### # start gene g312 Scaffold_2 AUGUSTUS gene 1529143 1529526 0.82 + . g312 Scaffold_2 AUGUSTUS transcript 1529143 1529526 0.82 + . g312.t1 Scaffold_2 AUGUSTUS start_codon 1529143 1529145 . + 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_2 AUGUSTUS CDS 1529143 1529526 0.82 + 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_2 AUGUSTUS stop_codon 1529524 1529526 . + 0 transcript_id "g312.t1"; gene_id "g312"; # protein sequence = [MEDFPQVSAYLQSRSLQPPLPPSVSSSSIETMTSQYAQNAVSEQLTVSLLSSVQDLVDQGVDPESADAELRRRVEEAV # VNGLLNGYTLGTQISSESGQEPEGTHTRTLPVDDSGGEESENKRPRTER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g312 ### # start gene g313 Scaffold_2 AUGUSTUS gene 1532622 1534036 0.98 - . g313 Scaffold_2 AUGUSTUS transcript 1532622 1534036 0.98 - . g313.t1 Scaffold_2 AUGUSTUS stop_codon 1532622 1532624 . - 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_2 AUGUSTUS CDS 1532622 1533719 0.99 - 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_2 AUGUSTUS CDS 1533851 1534036 0.98 - 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_2 AUGUSTUS start_codon 1534034 1534036 . - 0 transcript_id "g313.t1"; gene_id "g313"; # protein sequence = [MDDVEGLVDVCSKESTERASLTKRDLYDPFDQLDIDFPSFKRNPRLNQHPQHPTQDHKDLESYRKSRNSRVDIVTLEG # IEYVLQARRTPAGRFNSHSRTLFGSRINAIRQILESKEGTYCDPSLVTSPYFDGIHNSSSVSIASSETLNGLSSDHNRSSSDPILDSFEDDIEESDYQ # TGPNSDDFYWPEDDMDYEAPELSAVLDASFSDVNKSLAEVPTSREETPDHTAFANHPFYKEIMRNLQRVFRLKNFRQNQLEAILAAMAGRDVFVLMPT # GGGKSLCYQLPAVCNGGSTKGVTIVISPLLSLMTNQVDALKTKDVDVLVWNSETVDHGEIMRRLRGYPKPSLLYVSPEKVKDSGALKSIFADLYRAGD # LARFVVDEAHCISTWGHDFREAVSTFYLPCIVYAYVDCFSISVSTPFARPIPGSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g313 ### # start gene g314 Scaffold_2 AUGUSTUS gene 1542781 1543947 0.87 + . g314 Scaffold_2 AUGUSTUS transcript 1542781 1543947 0.87 + . g314.t1 Scaffold_2 AUGUSTUS start_codon 1542781 1542783 . + 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_2 AUGUSTUS CDS 1542781 1543947 0.87 + 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_2 AUGUSTUS stop_codon 1543945 1543947 . + 0 transcript_id "g314.t1"; gene_id "g314"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g314 ### # start gene g315 Scaffold_2 AUGUSTUS gene 1543998 1544855 0.71 + . g315 Scaffold_2 AUGUSTUS transcript 1543998 1544855 0.71 + . g315.t1 Scaffold_2 AUGUSTUS start_codon 1543998 1544000 . + 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_2 AUGUSTUS CDS 1543998 1544855 0.71 + 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_2 AUGUSTUS stop_codon 1544853 1544855 . + 0 transcript_id "g315.t1"; gene_id "g315"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASVKIMYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g315 ### # start gene g316 Scaffold_2 AUGUSTUS gene 1546525 1548309 0.45 + . g316 Scaffold_2 AUGUSTUS transcript 1546525 1548309 0.45 + . g316.t1 Scaffold_2 AUGUSTUS start_codon 1546525 1546527 . + 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_2 AUGUSTUS CDS 1546525 1548309 0.45 + 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_2 AUGUSTUS stop_codon 1548307 1548309 . + 0 transcript_id "g316.t1"; gene_id "g316"; # protein sequence = [MLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVH # HVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHD # HPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPC # TSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVI # NSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLG # DRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSW # EPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g316 ### # start gene g317 Scaffold_2 AUGUSTUS gene 1551808 1554151 0.65 + . g317 Scaffold_2 AUGUSTUS transcript 1551808 1554151 0.65 + . g317.t1 Scaffold_2 AUGUSTUS start_codon 1551808 1551810 . + 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_2 AUGUSTUS CDS 1551808 1552961 0.66 + 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_2 AUGUSTUS CDS 1553521 1553554 0.92 + 1 transcript_id "g317.t1"; gene_id "g317"; Scaffold_2 AUGUSTUS CDS 1553708 1554151 0.9 + 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_2 AUGUSTUS stop_codon 1554149 1554151 . + 0 transcript_id "g317.t1"; gene_id "g317"; # protein sequence = [MPNLTVFGATEYMDGALTLPVLNELLLRGAPSRGRGRPSRGRAFINVSDAEEEDRERRRECVELEALDFTGCVSAVFV # NALTEFVTTNLLPPFEGISERDVLHRFATSSLDDMLFLPGLQRLGLRGVKSVLPHILTPFVLAFPSLTHLDLSGTRASSELLAALGQSPTVRLQSLAL # SRCIRLTSAGIRSFLIDSPVTSNLTELNLYGDMTFVSPLEEHDLKDILSLAPCFVRGNLVYLDLSSAPLTQDVLDVCQPLQKLRSLGMSHIPDLPLKV # VSTFILSKAPHVEVLALVGTTPELDCGLRPGNTGPVAQRGTVRQSCVALHSRLINPLCTPPFSFSILNPDSRKSQAPTSLRVVELSQVMLGGLGGGAG # SWRIVRSKGGRGCSPSFTYIANLMLYKYNFDLTADRIDDCDVKSECLSANFESSNCLTGRIYLLNFHLAPQNSSNSVMFPESVEESTESRQPLFQPAS # SSAVGTRVEVGQPGFSKRTNTGNNVNRTPTRTSFNLQRAKTSLLTPTKSIGPAPSFLQSIKSIVMASCACSSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g317 ### # start gene g318 Scaffold_2 AUGUSTUS gene 1565185 1566309 0.96 + . g318 Scaffold_2 AUGUSTUS transcript 1565185 1566309 0.96 + . g318.t1 Scaffold_2 AUGUSTUS start_codon 1565185 1565187 . + 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_2 AUGUSTUS CDS 1565185 1566309 0.96 + 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_2 AUGUSTUS stop_codon 1566307 1566309 . + 0 transcript_id "g318.t1"; gene_id "g318"; # protein sequence = [MEDGEITSRSPSNKRHWSVHVASECEPLSSNHAHEQCQGLTWGTASDEWDDPNRSQMPSKAGLRLVVLNSRTLPKFNV # AIIDGYPEVQLGRDNPVSDHIPRIRLKEMEVSKLHASIYWDQSWDGWGVVDMGSKHGTYLHSSALTIGNSQAVERKVRLSISKTASTPKRLHHLDHLT # LGTTVFIVHIHENQLPCEECSPGVGGEIPLFATSSSPKPSSNNNINVERSSGYEATRPLIHDSRKALSQLKRELMSRPRHVDTRHSSNMAGSVTVGRY # VDRSARRRAMYRASSSDAPGIPTSSQSSPQDFPKLTLQYKPEPISKPAVPIPASSIGYRLLIQQGWHPGTVLGPTERGLIEPLDIQLPCDRSGLGMRT # IK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g318 ### # start gene g319 Scaffold_2 AUGUSTUS gene 1566769 1567605 0.85 + . g319 Scaffold_2 AUGUSTUS transcript 1566769 1567605 0.85 + . g319.t1 Scaffold_2 AUGUSTUS start_codon 1566769 1566771 . + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_2 AUGUSTUS CDS 1566769 1567605 0.85 + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_2 AUGUSTUS stop_codon 1567603 1567605 . + 0 transcript_id "g319.t1"; gene_id "g319"; # protein sequence = [MPLRGKADENATSKHLRQLSGSALSGTSKTLQKEAVGVKNNIVRAALGEVTTTAVNRRVRWLSRLPCPRVAHNFSTQE # NNSKVLLGKEKDEVSLKRGRSNSTNNAVQRVPLGPGRSQVAPPVTSTAPIRAAPGRSSRPSTLNASRRSIRDTSRPIAIYEDVDMDVEDQLEPVVVLS # EENPSEAASEADANFLTSEPDGHDMVLVEAEDEDTETVAFQESKAPKVWPDLATQHRLDCERQVETIREVFDDDDDEFDPTMVSEYAEEIFEYMSGLE # VRSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g319 ### # start gene g320 Scaffold_2 AUGUSTUS gene 1571210 1572337 0.64 + . g320 Scaffold_2 AUGUSTUS transcript 1571210 1572337 0.64 + . g320.t1 Scaffold_2 AUGUSTUS start_codon 1571210 1571212 . + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_2 AUGUSTUS CDS 1571210 1572337 0.64 + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_2 AUGUSTUS stop_codon 1572335 1572337 . + 0 transcript_id "g320.t1"; gene_id "g320"; # protein sequence = [MIAQHPFAFAATSGELWVPQSYKQAMRRPDLWTAPMEAEVRTLIQKECWEFVPLPPNANLMGGRWTYAIKFDATGNLL # KWKARYVAQGYTQIQGLDYDKTYGGVARMESVRLVLAITAALKLSLFQVDFTAAFLNSPITHDVYMKQPEGFTEPGSEHLICKLKKSIYGTMQGSHDW # QATLSAGYKADGYSTSRADPCIRYKRIQDEYMITSTYGDDVCGGSSTRAGRDEAIANLGKRWEANEVTTGVLLGMTIQQDPGTKAITISQKTYFQRML # NHFGLDCVRRRNTPLPLNVKLKESPTPLSDEENRYMADKQYRAVVGSILWGQVCTHPDLAFAGSLLARYQLNPGRAHWECVEWVAGYILNTLDYAIAY # KAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g320 ### # start gene g321 Scaffold_2 AUGUSTUS gene 1577310 1578185 0.41 + . g321 Scaffold_2 AUGUSTUS transcript 1577310 1578185 0.41 + . g321.t1 Scaffold_2 AUGUSTUS start_codon 1577310 1577312 . + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_2 AUGUSTUS CDS 1577310 1578185 0.41 + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_2 AUGUSTUS stop_codon 1578183 1578185 . + 0 transcript_id "g321.t1"; gene_id "g321"; # protein sequence = [MPMPVPIPGHYVSPILVEPQLAPDYAKMGSSASSTSEGSLNSYVSRIAHFFQHINELPWVADSRVTVDYYPGQSPRRA # RSRPPHRKVLSWYNRHAFPPGQNAEPLDLDAGSSPSPVLGQVVQMIEAQPSVITKEPTKDAIQPLILPTVPVPESQIESGPTYFAELISPLPPRSDTQ # QSARTGRSIVYSVVNPSAPSTSTTTTTTSSPLTEPPRHLGIDTMTALAQSITGYTPYQPVAPQYGRPIHEPLAQVPVASSVISTGDIREVPPAHTRTG # TPAQSMYPYPLYAPPTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g321 ### # start gene g322 Scaffold_2 AUGUSTUS gene 1585113 1585268 0.89 - . g322 Scaffold_2 AUGUSTUS transcript 1585113 1585268 0.89 - . g322.t1 Scaffold_2 AUGUSTUS stop_codon 1585113 1585115 . - 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_2 AUGUSTUS CDS 1585113 1585268 0.89 - 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_2 AUGUSTUS start_codon 1585266 1585268 . - 0 transcript_id "g322.t1"; gene_id "g322"; # protein sequence = [MEELLDADDEDDDTEAVDLKELEEDVEEVVDTPATPVANPSKLGVPLLAVF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g322 ### # start gene g323 Scaffold_2 AUGUSTUS gene 1585457 1586356 0.8 + . g323 Scaffold_2 AUGUSTUS transcript 1585457 1586356 0.8 + . g323.t1 Scaffold_2 AUGUSTUS start_codon 1585457 1585459 . + 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_2 AUGUSTUS CDS 1585457 1586356 0.8 + 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_2 AUGUSTUS stop_codon 1586354 1586356 . + 0 transcript_id "g323.t1"; gene_id "g323"; # protein sequence = [MDKKPETAEIAPMEKLTMFKKSTPSIRTAYTSKTEELPAFDFGSHPFSQYHPNLAKELASADEPPVPPFRHRADSAAV # SWDGDTIGGASFLSAPSKRMSGAMSPTVEIARPTPALTNSEPHRWESAEVVNLEGHVAEVIDPQDSENPFEHPMERRKSQHNPFFGSSSSEVPIAKDY # KGKGRARELTPLPPIPVSNPFVDDSENLDKTPTRPTFNHQVIGSVSSISSNDRAIQSLIAALDTTPEEVHARLKVAEPSLASDTADSIYTSAEYNSED # EDAEEDVTNSFPLPPGSDHSGHSFD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g323 ### # start gene g324 Scaffold_2 AUGUSTUS gene 1587657 1590415 0.9 - . g324 Scaffold_2 AUGUSTUS transcript 1587657 1590415 0.9 - . g324.t1 Scaffold_2 AUGUSTUS stop_codon 1587657 1587659 . - 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_2 AUGUSTUS CDS 1587657 1588197 0.92 - 1 transcript_id "g324.t1"; gene_id "g324"; Scaffold_2 AUGUSTUS CDS 1588311 1590415 0.98 - 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_2 AUGUSTUS start_codon 1590413 1590415 . - 0 transcript_id "g324.t1"; gene_id "g324"; # protein sequence = [MSGISLAESLSKHLPALPTFDSPPPSVSHSTSPSPSFSPSPSPSPHPRSPSASASSLHLPRSPSSIQAQVHSALQVDS # ALAAFLSPNNLPPPSLSPSAGSASPSPGVNDFPLYPTTTGQTSSSSLPQHASTPHSSMRIKNVSHLGLMRPAYIRSTGSDDSRSFAASISRPGSSVSA # PRQETNMTASASASASVGRNTFSAARTRTRSMSVDEQSPRQASGAGLITSRRDSSFLIRRQNYKSHTRSLSQFGDHDKTQSEAGDVRPSSQRNVQQRP # PITEWLGPRTAKAFKAAGLLASQSHDSDSISSQRSHPYLDSNSSPSLSVPSSPVRARFRPVSYASDISYSPNSPNSHSPSPPYPSNIHTPHPRSASVA # ASAISARSGGSVRSASIRSGSVRSASTAPTSLSTSLGPSAPAQAAREYLMQSQNQQQKFSSSSSTLNLPTTTSLAPSSSVNGAPPSEVQLLKDQHSIE # TSALLAALSDAQRTTRVLRVENAELRAALTLAENKQESWEQEKLQLKLQLEEVEDRLKEVRGRKREDLKFIEEIKGLHKAKAGLISKLDEAEARLMQA # EGKLCVLNEIKTSNYKLRQALHVAQRDKARVEAEAEMRAEEALRRIEQLEEALSEASGAIDATLGMAKMTDGLKPNANGVYHNPLTTNISFLDSQIEF # RKTSKINSRTSSESPPLSSASSSRPPSIFPLPPDNIKLKVRPSQESEDAENFELDASESKWRQSMQTPMMEAHPSTPFPKSIPDPRHNLYDASASISR # SRLGSTSFSHLTHTYSSDDHDSLYPDPDLASSHVKHPNSSHHSLHSEYEYEDEAVVGNTTFYDAGGPEEDSIISEDEDRLLDLDPDPTVRANLRPDTS # RMSLLYPALHPTRTITRSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g324 ### # start gene g325 Scaffold_2 AUGUSTUS gene 1597446 1597966 0.49 - . g325 Scaffold_2 AUGUSTUS transcript 1597446 1597966 0.49 - . g325.t1 Scaffold_2 AUGUSTUS stop_codon 1597446 1597448 . - 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_2 AUGUSTUS CDS 1597446 1597699 0.99 - 2 transcript_id "g325.t1"; gene_id "g325"; Scaffold_2 AUGUSTUS CDS 1597795 1597966 0.49 - 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_2 AUGUSTUS start_codon 1597964 1597966 . - 0 transcript_id "g325.t1"; gene_id "g325"; # protein sequence = [MPQNVPLYVSVSRASLIFSVPRKIAIDNRHGPKLYARFLKSLIASPMVAELNSRVITTYASPATTTHSLSPPPSTAAM # SFDQFAPSGGAIDPFVPDNVALQGSAYDPNVMDYLGSMPSDDELMRFHSMNDQSIWQDVTVSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g325 ### # start gene g326 Scaffold_2 AUGUSTUS gene 1598103 1600064 0.22 - . g326 Scaffold_2 AUGUSTUS transcript 1598103 1600064 0.22 - . g326.t1 Scaffold_2 AUGUSTUS stop_codon 1598103 1598105 . - 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_2 AUGUSTUS CDS 1598103 1598782 0.5 - 2 transcript_id "g326.t1"; gene_id "g326"; Scaffold_2 AUGUSTUS CDS 1599243 1599365 0.89 - 2 transcript_id "g326.t1"; gene_id "g326"; Scaffold_2 AUGUSTUS CDS 1599422 1600064 0.45 - 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_2 AUGUSTUS start_codon 1600062 1600064 . - 0 transcript_id "g326.t1"; gene_id "g326"; # protein sequence = [MAKLAKLEEANKQKSSLHSAGLSESSSPPILSPSSTHDSAYFSSDLASATQVSPGANQDVEDWIAKARESLAEFGGFI # GIGGASMPKSYIVEQDPESLSDSGGDTDSSLDAPRSNGEYEFAVVDDEGEERSPQGSEIKRPMGKRLSNSSAGSISGFKKKESTGKSVTIPNEAVPFG # LMAELSYKNIRERGSNSEVETDEPGAETGVANANFFRPSPGPDPARTQTTNLPQLPHILARGIITPSDAEKLFKMFVRTXLNLHLPNTAKPQNEMHAR # EQLNRTRVWLNCFNLDRSTGSQNGKPPIISNNDYIANHSEDWWKLSPYNMKNFDIQLCCYNSELKVMSNFRSKIYNDPDHATGLNKVEILSSCICMTV # FTKKFKGCRFRQIAAETDEEFLALQTKWFPILDENVDKNDPPGHFRLGLLKLAFGYARLIVLSYGFQHAFGKNSSNDNPFLDRCMNAANDIVQTMVED # IGRPEQSKRFD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g326 ### # start gene g327 Scaffold_2 AUGUSTUS gene 1603416 1603937 0.71 + . g327 Scaffold_2 AUGUSTUS transcript 1603416 1603937 0.71 + . g327.t1 Scaffold_2 AUGUSTUS start_codon 1603416 1603418 . + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_2 AUGUSTUS CDS 1603416 1603937 0.71 + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_2 AUGUSTUS stop_codon 1603935 1603937 . + 0 transcript_id "g327.t1"; gene_id "g327"; # protein sequence = [MYRAATCSAIPFKLTSTQELLKTSSSDMNWGPLIAFVLSAFVSASNLTVTVSSPPTLPETASHTLHPSLASFSIETAF # FIMYVGNTTSPNILTRDLLQNIKDRIGIPAEIRIGGITADSTFWDPSLEAAIFNFVDNTGALINTTIGWEFWDAARELLPEGTQITVNLVCPIQF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g327 ### # start gene g328 Scaffold_2 AUGUSTUS gene 1609180 1609908 0.55 - . g328 Scaffold_2 AUGUSTUS transcript 1609180 1609908 0.55 - . g328.t1 Scaffold_2 AUGUSTUS stop_codon 1609180 1609182 . - 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_2 AUGUSTUS CDS 1609180 1609908 0.55 - 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_2 AUGUSTUS start_codon 1609906 1609908 . - 0 transcript_id "g328.t1"; gene_id "g328"; # protein sequence = [MNFRHCARKAIGTQSSNIQHHCRKNSSRCNKDVPGPEGHVENDTGSNGRNLVRNVYKYILIFADFLNFVSMYRLTNDG # NAILREIDVAHPAAKNMIELSRTQDEECGDGTTSVIVLAASILASSLSQLERDIHPVVIISAYNKALREALAIIEKVAIPVNVEDEEQMLGIVKGALG # TKFVSRWSELMCKLALDAVHIVAQNVQSDKSDSQYASTFSSATPTVDIKRYARIEKYLEEQSKNPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g328 ### # start gene g329 Scaffold_2 AUGUSTUS gene 1611325 1612936 0.46 + . g329 Scaffold_2 AUGUSTUS transcript 1611325 1612936 0.46 + . g329.t1 Scaffold_2 AUGUSTUS start_codon 1611325 1611327 . + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_2 AUGUSTUS CDS 1611325 1611763 0.46 + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_2 AUGUSTUS CDS 1611870 1612936 0.94 + 2 transcript_id "g329.t1"; gene_id "g329"; Scaffold_2 AUGUSTUS stop_codon 1612934 1612936 . + 0 transcript_id "g329.t1"; gene_id "g329"; # protein sequence = [MLAASASLLNIPVVVLDVGVDAPAKQIIASSSHIDGSFRDKKKIAELAKRVDVLTVEIEHVDVEALETVQESHPNVSI # HPSPSTIRLIQDKFSQKEHLSSVGCPLGPFQAVDATPEAITQAAKELGLPLMLKSRTMAYDGRGNYLLLMVVRGLDETVASYPAVETIHRDNICHLVW # APFRLSDIDQDPALPTKAERVAREAVGKAFKGAGVFGVEMFLLNNGEILINEIAPRPHNSGHYTIEACESSQYDNHLRAILGLPLGSTRIKVGAAGML # NILGSSDGQSSKISESSSPSSSSFADDLLIDKLTHIALSTPGASPHLYGKAQSRKGRKMGHITIVGTSDAEVRERMAPLLSCLSEFEGDVQGDQASSP # DPPHLLGYSHPHPVISIIMGSDSDLPVLLPAAQILTKHFPSIPFEVTLISAHRTPLRLVNFAKSAAGRGVKVIIAGAGGAAHLPGMVASLTGVPVVGV # PVDSKSVSGSGGGLGGVDAMWSILQMPVSTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g329 ### # start gene g330 Scaffold_2 AUGUSTUS gene 1621238 1622308 1 + . g330 Scaffold_2 AUGUSTUS transcript 1621238 1622308 1 + . g330.t1 Scaffold_2 AUGUSTUS start_codon 1621238 1621240 . + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_2 AUGUSTUS CDS 1621238 1622308 1 + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_2 AUGUSTUS stop_codon 1622306 1622308 . + 0 transcript_id "g330.t1"; gene_id "g330"; # protein sequence = [MLSAIAARKAATAAAASGGVKPDTNSASASTSTVSTSISTPITKSKPRPTPSKRKHSTNAALDGSITAKKRRRRERDV # LENPGTQSRYFEQGRPAATEGEDGVGRGEDDEEEEDWDGSNSDVKVQTTATRGYSPSRPISPDDSSHEEQVQNGSIQPEPQSQSQSQVLWTTFVPIAG # QNTFYLSPDELSLVLSSEKSTVPATLIALGPSENLTLLGTYRSTVIRGSIEIGGAILRSRVHPETHNVFAPRSSPVPSIRVVSSAPSSPLPALLPLRI # QHEIAALVGDPVLVLLQELHSGVEALGKVCRTFDGVLRCTPGMSLIVIVNWRKNRGRSSIDGSKNREFSWFCTVEFILIKKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g330 ### # start gene g331 Scaffold_2 AUGUSTUS gene 1626417 1626719 0.72 + . g331 Scaffold_2 AUGUSTUS transcript 1626417 1626719 0.72 + . g331.t1 Scaffold_2 AUGUSTUS start_codon 1626417 1626419 . + 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_2 AUGUSTUS CDS 1626417 1626719 0.72 + 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_2 AUGUSTUS stop_codon 1626717 1626719 . + 0 transcript_id "g331.t1"; gene_id "g331"; # protein sequence = [MIIHSVPIVHLDVTRLRVGQNTDSLNDLSPGVYRYRRSVRGGLRRSSASAESSPNVDSCKVDTEVDVGGCCGTDFRGT # ADCDGYGSVPPPQLDDDDDWGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g331 ### # start gene g332 Scaffold_2 AUGUSTUS gene 1628459 1628821 0.46 - . g332 Scaffold_2 AUGUSTUS transcript 1628459 1628821 0.46 - . g332.t1 Scaffold_2 AUGUSTUS stop_codon 1628459 1628461 . - 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_2 AUGUSTUS CDS 1628459 1628821 0.46 - 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_2 AUGUSTUS start_codon 1628819 1628821 . - 0 transcript_id "g332.t1"; gene_id "g332"; # protein sequence = [MSDEEKIEEQKKVGAQSALPKITHAGYASLEVRPVPFHDISHSHISFSSQLIRYFTCGPDEVRAWTIRKGTKAPQAAG # VIQYVLYLMYHLHQAHLLLSLFHSAPTLKINLFAVKSCHSLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g332 ### # start gene g333 Scaffold_2 AUGUSTUS gene 1629325 1629891 0.73 - . g333 Scaffold_2 AUGUSTUS transcript 1629325 1629891 0.73 - . g333.t1 Scaffold_2 AUGUSTUS stop_codon 1629325 1629327 . - 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_2 AUGUSTUS CDS 1629325 1629891 0.73 - 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_2 AUGUSTUS start_codon 1629889 1629891 . - 0 transcript_id "g333.t1"; gene_id "g333"; # protein sequence = [MTPLQGASTGAGLGNAFLSHVRAVDGIFQVVRAFDDAEVIHVEGDVDPCRDMDIIQTELRLKDIEWVEKHLDGMKKTT # RALGSNSLADKAKKEEIVRIHLVPHFTTCLYRHFRLPLRKFSKSFQLIRKMSANMNGPVKRCVHTFIHVYRMKKSYTLETQLVEAGVTPHCAYEMLFY # AEYPVFIIACSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g333 ### # start gene g334 Scaffold_2 AUGUSTUS gene 1630650 1631381 0.56 + . g334 Scaffold_2 AUGUSTUS transcript 1630650 1631381 0.56 + . g334.t1 Scaffold_2 AUGUSTUS start_codon 1630650 1630652 . + 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_2 AUGUSTUS CDS 1630650 1631381 0.56 + 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_2 AUGUSTUS stop_codon 1631379 1631381 . + 0 transcript_id "g334.t1"; gene_id "g334"; # protein sequence = [MDIGAGITTGTAELREATKMERIGVHSHITGLGLDDRLEPRPNSQGIPNYILSSIGLNLLNLILGMVGQLRARKAAGV # ILRLLSPSSFSSSTVSAAPGLSGRAILLAGPPSTGKTAIARGMAATLGPDVPFTSITASEVYSLSMSKTEALTQALRRSIGVRIREEEEIVEGEVVEI # VVERGITGSGKSGRVILKTTDMETVYEMGGKMIDEMTKEKVRVYEICAFSQHIIITTSRSLQATSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g334 ### # start gene g335 Scaffold_2 AUGUSTUS gene 1635531 1637914 0.19 + . g335 Scaffold_2 AUGUSTUS transcript 1635531 1637914 0.19 + . g335.t1 Scaffold_2 AUGUSTUS start_codon 1635531 1635533 . + 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_2 AUGUSTUS CDS 1635531 1636713 0.19 + 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_2 AUGUSTUS CDS 1636761 1637914 0.52 + 2 transcript_id "g335.t1"; gene_id "g335"; Scaffold_2 AUGUSTUS stop_codon 1637912 1637914 . + 0 transcript_id "g335.t1"; gene_id "g335"; # protein sequence = [MPSEAGQRHRTGAEEEEEPRVSWNFGFDENEAGPSSGPVPPTQLSPTSPFRPPLVPSVKDAVSKFHTGPDIDPRILLP # SPPRRKGKEREVIDVDADDDSWLMPPPRSNRHIASDGDTSREIRVKGKERELSAAIEEHKMKEKRWERDKESVTGDEENVIREKERDKEKIRKLEEEI # ERLKEELRRRPAPSPPFPIPPPPPPPPQPPLAISIAAPSALNNSNAPAPFAHARAALNHAPTPKEAPINPPRRGGQPTVGVTADKMAAFLTEMKTVRL # RKVGSQSTLGKSTGNLSRRDSFGNDNSRRDSFDDLNIERSRLSISDLRTTKEILDIRTQHGPSVGPSSAVARELSWPSTRSVSSNSEEDASGSLHRKR # KRMESADEETNHNKSGDLSSQIQKLRESIRNKRRTMNSSYSKINPTSTFHSAYPFRPLPPTASGPPQSIVSQTSFEYSVVPQGTDFSTRVRGSISTDS # TSSSNANHNLDKPDTFASSSTSAPADTPSLCSDNDAEMDAERPEHDNDSSTPPSTPPGTTARFTTPPKYTGEVIDLEVDLVDEDDQHDHDPSEDQKQS # RRRSSPHPSAYLTAKRIPVSPLPNMSPKRPKPPASSRRRIRTSTGRATTHPIPATPPSHANLYDLEHQDDEGDEDPLLLRLTADEDDFVSLSGLSQRQ # PQRRRSTLDEEMRAAHRASLNVETQGGYSEDELENGVLVATGARSKNLGFLAHGGAGGPPVWMGEGYVLGVGDAEEEQREDHRLSSKESGKEKSRTRI # PIPKSKPPMVMRGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g335 ### # start gene g336 Scaffold_2 AUGUSTUS gene 1638327 1638613 0.73 - . g336 Scaffold_2 AUGUSTUS transcript 1638327 1638613 0.73 - . g336.t1 Scaffold_2 AUGUSTUS stop_codon 1638327 1638329 . - 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_2 AUGUSTUS CDS 1638327 1638533 0.95 - 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_2 AUGUSTUS CDS 1638584 1638613 0.73 - 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_2 AUGUSTUS start_codon 1638611 1638613 . - 0 transcript_id "g336.t1"; gene_id "g336"; # protein sequence = [MWLMLQGQGLKPEEPPTDFVLATGETHPVREFVEKAFGVVGIKLAWSGSGLDEEARDVNTGKVVVKIDPQYFRPAEVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g336 ### # start gene g337 Scaffold_2 AUGUSTUS gene 1653154 1653783 0.93 + . g337 Scaffold_2 AUGUSTUS transcript 1653154 1653783 0.93 + . g337.t1 Scaffold_2 AUGUSTUS start_codon 1653154 1653156 . + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_2 AUGUSTUS CDS 1653154 1653783 0.93 + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_2 AUGUSTUS stop_codon 1653781 1653783 . + 0 transcript_id "g337.t1"; gene_id "g337"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g337 ### # start gene g338 Scaffold_2 AUGUSTUS gene 1653873 1655600 0.69 + . g338 Scaffold_2 AUGUSTUS transcript 1653873 1655600 0.69 + . g338.t1 Scaffold_2 AUGUSTUS start_codon 1653873 1653875 . + 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_2 AUGUSTUS CDS 1653873 1655600 0.69 + 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_2 AUGUSTUS stop_codon 1655598 1655600 . + 0 transcript_id "g338.t1"; gene_id "g338"; # protein sequence = [MTLRLEDVIRIQECIPEDVAMVLREVLESMGIEILGDGLEFSDLRVQFLTVGTQLEIDLPEKAQQWLMTPANRSDFLW # LYNVLLDPERMLELLEAEARYGRSFRNSRGILPLLPHTHGREKEFCGEAGLRILYRASNYRSGAVRFEPPPSRVNIPNYQAIQILRNANLAEAAAKID # EESNEDANAIAAKNRRRRRYTTAHLLAPVESMPDQDSPVRVRNGQTVYTYTPMRHMHQLLVRSEESEAMLCSQETRHRTLLAESDTLMLSEELSGSNL # ERALEFRRRLVADNRGTSYMVQCELESVGEFPPEQFDQKGQLHGSDGRFLAQKHSSPRNTEVPELLNPGNTATRSPQLRSGTSPTVHALAQNATPPPR # VNLQTKPLTPVSTQRYQFGEVRMDGAQHSSRISGQDLTARLAPNPVHVPPRLSNPSVIPYQGSVSMQSQAVGTESQRGPNQRRTLAVHEEAVPPQGAP # FGTPFVTGAQMNRPGMAFESARSQESVAMIQQQARVIETLQEQLREVKKGFTAGEVPTGGPLSKTGNTAGLSGRAPKGNERIYEGGSFSCSSPAKELA # SYGTNIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g338 ### # start gene g339 Scaffold_2 AUGUSTUS gene 1655738 1656385 0.87 + . g339 Scaffold_2 AUGUSTUS transcript 1655738 1656385 0.87 + . g339.t1 Scaffold_2 AUGUSTUS start_codon 1655738 1655740 . + 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_2 AUGUSTUS CDS 1655738 1656385 0.87 + 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_2 AUGUSTUS stop_codon 1656383 1656385 . + 0 transcript_id "g339.t1"; gene_id "g339"; # protein sequence = [MGDQKEERTRWKTREEAKAVLTPPRVPPPHFSSQSRDRERPLSQGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSN # SEGSKGEQNEGGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTW # VLSLERMFGVRLPSMLGKRTSALPQLVISLVQHSPTSTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g339 ### # start gene g340 Scaffold_2 AUGUSTUS gene 1659990 1661509 0.84 + . g340 Scaffold_2 AUGUSTUS transcript 1659990 1661509 0.84 + . g340.t1 Scaffold_2 AUGUSTUS start_codon 1659990 1659992 . + 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_2 AUGUSTUS CDS 1659990 1660269 1 + 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_2 AUGUSTUS CDS 1660318 1660702 0.89 + 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_2 AUGUSTUS CDS 1661158 1661509 0.98 + 1 transcript_id "g340.t1"; gene_id "g340"; Scaffold_2 AUGUSTUS stop_codon 1661507 1661509 . + 0 transcript_id "g340.t1"; gene_id "g340"; # protein sequence = [MTLYGLKYGPPQAPEASRTETSTLTSLLRETTTSLDDRNKDLEASRRALQEVAADRLEYGRVLAQFRAIEAELPQAPL # EVDVVPPIPFPFRLTFAEVDAYREVAVRQKQELSELRAQVDKEQKRSYEAHEELDAANARAIRVRDRLEELEETVHRYRTRAHVAEELIRKYPEDEGL # YEVDLPSLSSLQDKLTASEVMLRRMATFAHRLHSADPANLLHHHNTLSCLPGSHLAPVEVPSSNDPLPATTSLVVDGPPPVLGASDSVSRSTPLFLPG # SLSPTSPRSPSPIPSSPRVPDVVREVVDLTMDDAEDLYESQEEFLARTGGTVTIKQEITESDVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g340 ### # start gene g341 Scaffold_2 AUGUSTUS gene 1662024 1663380 0.24 + . g341 Scaffold_2 AUGUSTUS transcript 1662024 1663380 0.24 + . g341.t1 Scaffold_2 AUGUSTUS start_codon 1662024 1662026 . + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_2 AUGUSTUS CDS 1662024 1662625 0.27 + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_2 AUGUSTUS CDS 1662715 1662882 0.85 + 1 transcript_id "g341.t1"; gene_id "g341"; Scaffold_2 AUGUSTUS CDS 1662957 1663380 0.87 + 1 transcript_id "g341.t1"; gene_id "g341"; Scaffold_2 AUGUSTUS stop_codon 1663378 1663380 . + 0 transcript_id "g341.t1"; gene_id "g341"; # protein sequence = [MEDSRVLDQFPALDEALSGAPGQVSTSFSPRFPPLFDPSSQSISERFRKVQEDLHNATRERRVAVEKLITSTRKNSQL # RTTLLHQQGLVDESNALATRQRRRVEELQEEVHRVRGRAVFVEQMLKEYPDEGYYEVVLPLSRNLKGTLIRLMRTSAVSLPSLIAFIVAILPPSFIIT # IVTLGRLLRPWLLSFVVVSILVISTIQWFFNNAVDEDEGLYRMILEHSRFDSDSPFLTAAHHAGFVPPPDDSVEPPLHRRIIDQLTADWEQMMLQYIH # HITDTPLSGIATQGPMSSVEPANESLPEVLVRQSPETPAALESTSSVGPHPQVPLFLPEQGSLTSPSPTLPPLFGSVANLVIDLTGDDDELYETEEVG # AGRFSVTREVIDLAASQDVVKDESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g341 ### # start gene g342 Scaffold_2 AUGUSTUS gene 1663602 1664566 0.35 - . g342 Scaffold_2 AUGUSTUS transcript 1663602 1664566 0.35 - . g342.t1 Scaffold_2 AUGUSTUS stop_codon 1663602 1663604 . - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_2 AUGUSTUS CDS 1663602 1664007 0.62 - 1 transcript_id "g342.t1"; gene_id "g342"; Scaffold_2 AUGUSTUS CDS 1664097 1664566 0.35 - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_2 AUGUSTUS start_codon 1664564 1664566 . - 0 transcript_id "g342.t1"; gene_id "g342"; # protein sequence = [MPADIVSDRGSLFVSQFWKELCRALGIESRLSTAYHPQTDGQTERVNQAVEAYLRIYCSYDQDDWDLLLPMAEFVYNN # TPNTTTGVSPFFANKGYHPKLSITLELVQGAEVNEYASNLKELHTYLQERIQVANEVYAQYANQKRQEAPDWKEGDHVWEPCVPIGPPWGPPQNSNVF # HVDRLKPHFHDKFKRQTSPPPPIFIKGETEHFVEDILDSKPKKGRPEEVEYLVKWEGYSEEFNSWVGWEGMAGSLELLRSWHEKHPRKRQPSQRHWAR # LIKDAQEDEEDEREDRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g342 ### # start gene g343 Scaffold_2 AUGUSTUS gene 1668934 1669719 0.73 - . g343 Scaffold_2 AUGUSTUS transcript 1668934 1669719 0.73 - . g343.t1 Scaffold_2 AUGUSTUS stop_codon 1668934 1668936 . - 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_2 AUGUSTUS CDS 1668934 1669719 0.73 - 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_2 AUGUSTUS start_codon 1669717 1669719 . - 0 transcript_id "g343.t1"; gene_id "g343"; # protein sequence = [MGDQKEERTRWKTREEAKAVLTPPRVPPPHFSSQSRDRERPLSQGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSN # SEGSNEGEQNQSSRNGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRSTWESNEEKNRITIESKLDVGKIESFAGDDRSA # WKTWVLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCLEDWTEFKREFGSKFGPIDEADEARRRLPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g343 ### # start gene g344 Scaffold_2 AUGUSTUS gene 1672399 1672854 1 - . g344 Scaffold_2 AUGUSTUS transcript 1672399 1672854 1 - . g344.t1 Scaffold_2 AUGUSTUS stop_codon 1672399 1672401 . - 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_2 AUGUSTUS CDS 1672399 1672854 1 - 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_2 AUGUSTUS start_codon 1672852 1672854 . - 0 transcript_id "g344.t1"; gene_id "g344"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGHVKIMYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g344 ### # start gene g345 Scaffold_2 AUGUSTUS gene 1674696 1675862 0.88 - . g345 Scaffold_2 AUGUSTUS transcript 1674696 1675862 0.88 - . g345.t1 Scaffold_2 AUGUSTUS stop_codon 1674696 1674698 . - 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_2 AUGUSTUS CDS 1674696 1675862 0.88 - 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_2 AUGUSTUS start_codon 1675860 1675862 . - 0 transcript_id "g345.t1"; gene_id "g345"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTT # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHQETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISAMGLAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g345 ### # start gene g346 Scaffold_2 AUGUSTUS gene 1677227 1678642 0.86 - . g346 Scaffold_2 AUGUSTUS transcript 1677227 1678642 0.86 - . g346.t1 Scaffold_2 AUGUSTUS stop_codon 1677227 1677229 . - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_2 AUGUSTUS CDS 1677227 1678642 0.86 - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_2 AUGUSTUS start_codon 1678640 1678642 . - 0 transcript_id "g346.t1"; gene_id "g346"; # protein sequence = [MNLNEDQNRVRNTVEDHLKAYLRGEQPQPLLMLVHGPAGTGKTAAVRSLAQLFVVHDSTNLLLKASASDVGAKSLDAV # FLNILSLTPALVVGKQYIVIDDCSALSTTVLRELAYLLSKSVGDDGASAMFGSKNVVLVGDVAQYPPSGRFWDTLWWPDSRSVALVKPFFENVVVFKR # DMSGKLESWTNLTRRVRTHSTVIGDVDLLNARVCQADGIASMDILSPNDKGIVITTNDTQRQYWNINFAFRFARGARKTLLISPAMDVMVFESGDRLS # SDDFDKMKERFKKEFTLLRGVYLFVGMPVTITHSEHRQVWGEVTRIVTDDRDIVEDGRYEVRLKYGVLQATVRVAESCRRANPGLELLVVITPVTHSF # KVNHPWEVNREMVIERTQLPLIPRYAITEEDAMGQTFEKVVLDTSDGFKGYKSPHLVLTRVKRNGDFRMTSTIQGISYSNDEIATQELLDVIATLEGL # D] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g346 ### # start gene g347 Scaffold_2 AUGUSTUS gene 1680531 1681742 1 - . g347 Scaffold_2 AUGUSTUS transcript 1680531 1681742 1 - . g347.t1 Scaffold_2 AUGUSTUS stop_codon 1680531 1680533 . - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_2 AUGUSTUS CDS 1680531 1681742 1 - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_2 AUGUSTUS start_codon 1681740 1681742 . - 0 transcript_id "g347.t1"; gene_id "g347"; # protein sequence = [MPQFIGRWFPQNDRVEDELQYRLMLLAVLKPWRTLSDIVKGFTTVDEAWKSFLRSSNGAHDTFIENIQYFYHCSDQSS # LRREKEYSTYKVTHEASGNENRNSIDEQEPPMQAPSIANEHWTEAQILEVQEAEKGQDQQFGYTAMEHAYDAGVFSRTYTLDPTAPVAVRCSQMDKVQ # YAEWAEKLKDFAANGGVVEASLGLDLGEGSASGLCMESSAHVEQSENVQGAMPGIRLRDVLNKEQGLFHDIVEDHLRANLAGLQPPQLLLILRGPGGT # GKTVAINAVTELFEKIGVQACLAKTATSGVAATLISGRTVHTWAGVPVGGPRGANWLEGSVQTAQKRQANIGPVEYLIIDEVSMATKDLLANISDIIG # YVRRKLDKPGDGLFFGGMNVILVVIFTSFRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g347 ### # start gene g348 Scaffold_2 AUGUSTUS gene 1684081 1685147 0.34 - . g348 Scaffold_2 AUGUSTUS transcript 1684081 1685147 0.34 - . g348.t1 Scaffold_2 AUGUSTUS stop_codon 1684081 1684083 . - 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_2 AUGUSTUS CDS 1684081 1685037 0.96 - 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_2 AUGUSTUS CDS 1685085 1685147 0.35 - 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_2 AUGUSTUS start_codon 1685145 1685147 . - 0 transcript_id "g348.t1"; gene_id "g348"; # protein sequence = [MGEDVEQSSNKRRKSQTALYTHPDEVIAGPLFAVPSEEQHRTLVAEYIGRTGNSATEQSVCCVCARELLRTEMEECSD # NAIPNGHLLAPEVEHVAHRLSDGKLLYTNAITNTIPPFVCSECVQQLRKGLRPRLSLANNMWIGAVPFELRILTLPERVLVSRFFAAAYIVKLYPKKP # GARAWPADLLTSGLKGNVSSYFLNTHEIAAMVDNGYLPPRASILAATIAVTFVGPRNIPLKALAPMLRVRRSRVAEALRWLITNNPLYAGINISAENL # QGLPEDGVPEEIWGNIKWTDQVSLLEKEHAGYVPEDEEEMQDSGEYPQDHSSNDEGTYIVLRRWR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g348 ### # start gene g349 Scaffold_2 AUGUSTUS gene 1685783 1686765 0.55 + . g349 Scaffold_2 AUGUSTUS transcript 1685783 1686765 0.55 + . g349.t1 Scaffold_2 AUGUSTUS start_codon 1685783 1685785 . + 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_2 AUGUSTUS CDS 1685783 1686257 0.74 + 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_2 AUGUSTUS CDS 1686383 1686765 0.71 + 2 transcript_id "g349.t1"; gene_id "g349"; Scaffold_2 AUGUSTUS stop_codon 1686763 1686765 . + 0 transcript_id "g349.t1"; gene_id "g349"; # protein sequence = [MNELQLHDYFQQLHANTTYLGHHDSSLPGPGSFFYSDSMHVWSHPLQPGREKPLPMVLHVVGRVSNQGNFTSLSGSLS # ALLNSTSGADKLRVKSMRRTALLGRARAGPFPQDWEPALMKIKQLQKILTRTDGEPTRFLWFNEGGGIADTHMKIGTPCFRRLTDLIPAKERSNPRWV # DASQNLAVANFNAADHTGATLPEALLPQILNGATIDVAFTLRGWKFGRDTLWGFTADIKQVVLLRPEQPEILYNSMVPAQSNVLYDSPTAARNSTGNI # TLLLSRTLLTP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g349 ### # start gene g350 Scaffold_2 AUGUSTUS gene 1687397 1687881 0.62 + . g350 Scaffold_2 AUGUSTUS transcript 1687397 1687881 0.62 + . g350.t1 Scaffold_2 AUGUSTUS start_codon 1687397 1687399 . + 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_2 AUGUSTUS CDS 1687397 1687416 0.65 + 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_2 AUGUSTUS CDS 1687530 1687881 0.88 + 1 transcript_id "g350.t1"; gene_id "g350"; Scaffold_2 AUGUSTUS stop_codon 1687879 1687881 . + 0 transcript_id "g350.t1"; gene_id "g350"; # protein sequence = [MPAGSNFPSVTSNAIAAPHRGTTYGDNIGVRTMYMQQHPAYSNVIGVESRDYAFQYPPPVGPPQLVQPFGFTGTNENL # SPAPASGPPFVPPADPHGNRSNKRLLLQEADCMSAMSMPTGNGTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g350 ### # start gene g351 Scaffold_2 AUGUSTUS gene 1687932 1688322 0.96 + . g351 Scaffold_2 AUGUSTUS transcript 1687932 1688322 0.96 + . g351.t1 Scaffold_2 AUGUSTUS start_codon 1687932 1687934 . + 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_2 AUGUSTUS CDS 1687932 1688052 0.97 + 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_2 AUGUSTUS CDS 1688111 1688322 0.99 + 2 transcript_id "g351.t1"; gene_id "g351"; Scaffold_2 AUGUSTUS stop_codon 1688320 1688322 . + 0 transcript_id "g351.t1"; gene_id "g351"; # protein sequence = [MDESNPTSPLSFVLAPNFDWSDPKDDTPTLNTINVAGKHHASEISPDSAFTVSQPLNGKIGNNDKGTTDITDSNNVPA # KGKKRVAPEDLAVRSTPAKSVKVDNSRGPSAN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g351 ### # start gene g352 Scaffold_2 AUGUSTUS gene 1695015 1696472 0.51 + . g352 Scaffold_2 AUGUSTUS transcript 1695015 1696472 0.51 + . g352.t1 Scaffold_2 AUGUSTUS start_codon 1695015 1695017 . + 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_2 AUGUSTUS CDS 1695015 1695592 0.53 + 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_2 AUGUSTUS CDS 1695911 1696472 0.97 + 1 transcript_id "g352.t1"; gene_id "g352"; Scaffold_2 AUGUSTUS stop_codon 1696470 1696472 . + 0 transcript_id "g352.t1"; gene_id "g352"; # protein sequence = [MTSMPPFAFTAKEIEFVKYGFARYTIKDKDVIQMEGAFQQEDSVLLVPTIHISEPLILLALALWANRNHNLWIIGPLH # YVLTTEITNHDVVKGNGLEKYIAYYFATVLARKEGCRLGEILHFHGRTKLMNSTAKLVAVNVLRNGRDMDESIDDYSSATILNKLNVVPPAPTKGDVI # SEGAFISCTAETNVPDLITDNSLFIQPYSPKSLPMLPERTREAMSFLPHRNTELAGPYSVLRIICPFPAPMELDRIPSQDDEEEDEDEDDEDIGQKRE # EGGQIVTDAGRKFSLCTDPDDLGHPLATLNIEKMINVMDQFIPENKLAAILAEKGQKVEYAAALANKRAIALDKEARQYRPTKAYESEGDQRSCQKNQ # GFEQEKN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g352 ### # start gene g353 Scaffold_2 AUGUSTUS gene 1697290 1697700 0.58 - . g353 Scaffold_2 AUGUSTUS transcript 1697290 1697700 0.58 - . g353.t1 Scaffold_2 AUGUSTUS stop_codon 1697290 1697292 . - 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_2 AUGUSTUS CDS 1697290 1697700 0.58 - 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_2 AUGUSTUS start_codon 1697698 1697700 . - 0 transcript_id "g353.t1"; gene_id "g353"; # protein sequence = [MPTSRDCGTNDQGTLDSDLFAFLTLFHLQRIIRAKDTSDSIGGIVTCVIRNVPSGLGEPCFDKFEATLAHAMLSIPAT # KAFEIGSGFRGTQVPGSKHNDAFVRRDDGRLGTKTNWSGGVQGGITNGEDIYFRYVAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g353 ### # start gene g354 Scaffold_2 AUGUSTUS gene 1701320 1701664 0.43 + . g354 Scaffold_2 AUGUSTUS transcript 1701320 1701664 0.43 + . g354.t1 Scaffold_2 AUGUSTUS start_codon 1701320 1701322 . + 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_2 AUGUSTUS CDS 1701320 1701664 0.43 + 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_2 AUGUSTUS stop_codon 1701662 1701664 . + 0 transcript_id "g354.t1"; gene_id "g354"; # protein sequence = [MYVYVSLTEVTQTTSTAVTWALYALTQNKEVQRRLREELIQVSTESPTMDMLNSLPYLDAVVRETLRVYSPVTGTLRV # AMKDDVIPLGVPFTDKNGEVHSDIRWAACHALCLNG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g354 ### # start gene g355 Scaffold_2 AUGUSTUS gene 1707497 1709617 0.17 + . g355 Scaffold_2 AUGUSTUS transcript 1707497 1709617 0.17 + . g355.t1 Scaffold_2 AUGUSTUS start_codon 1707497 1707499 . + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_2 AUGUSTUS CDS 1707497 1707674 0.71 + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_2 AUGUSTUS CDS 1707869 1707880 0.69 + 2 transcript_id "g355.t1"; gene_id "g355"; Scaffold_2 AUGUSTUS CDS 1708443 1709617 0.68 + 2 transcript_id "g355.t1"; gene_id "g355"; Scaffold_2 AUGUSTUS stop_codon 1709615 1709617 . + 0 transcript_id "g355.t1"; gene_id "g355"; # protein sequence = [MDILNSLPYLDAVVRETLRVYSPVTGTERVAMKDDILPLGVPFTDKNGEVHNDIRSVACYLNGGAQPHWYDMDHDQAF # FTLPQHIQRRIDAAFLSAIKHAHSLEVTTSRHSDLDSAEPPLKRRKISTHTELIVDSGGGFIVDIPKRYVAVDNGQGGGGFILNDTDVARNGDGEGGG # GFIIDVNTSNTSAGGFVRQDEQENEGVNDSEPFSLPEVHDSSQIPLSSIPTALQLLDLPPDDEQVLAIFRNAASGWDNHDGSRTDDNLAVTRADWRAV # CTILLEPGVGDDGMADGSRRQSGSPGGDGEYVEEDAEDDADIQYDDEPESDDDYEPGPSSATNFKSRSTRRPTPATSKVSVAGRRTRGTRFKTAETDS # DAGEDTDDDQERIHSRTKRLTARQKATCLEAFRLFFPDATDDLPTRRILLADIQRVAKLLGEKLKAEEVIELQLIFNLFVLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g355 ### # start gene g356 Scaffold_2 AUGUSTUS gene 1717620 1718473 0.64 - . g356 Scaffold_2 AUGUSTUS transcript 1717620 1718473 0.64 - . g356.t1 Scaffold_2 AUGUSTUS stop_codon 1717620 1717622 . - 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_2 AUGUSTUS CDS 1717620 1718235 0.8 - 1 transcript_id "g356.t1"; gene_id "g356"; Scaffold_2 AUGUSTUS CDS 1718349 1718473 0.65 - 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_2 AUGUSTUS start_codon 1718471 1718473 . - 0 transcript_id "g356.t1"; gene_id "g356"; # protein sequence = [MNTLLSTHIEFRFAQDEWKVRRYITHKYPEWNAKDKTKLTRALRTGKDKNAPPLGTEIIDLDNDELIATPITSEKAQP # TSISNSVPQSSHLQSSVSSLSPQLSFLQSSVSASSSAPARSTAIYAASISVVATSTALLSDSTSLDKVMAPSFNAVPSTAILTSSEHAPSPIAPIEGD # KSLPVGEPNKAVNSVATSTNGDPAPPETVLIDDSSGIITASDELSSARRCVSSRDSLSFIFLIQFPPFPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g356 ### # start gene g357 Scaffold_2 AUGUSTUS gene 1721290 1721652 0.55 + . g357 Scaffold_2 AUGUSTUS transcript 1721290 1721652 0.55 + . g357.t1 Scaffold_2 AUGUSTUS start_codon 1721290 1721292 . + 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_2 AUGUSTUS CDS 1721290 1721652 0.55 + 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_2 AUGUSTUS stop_codon 1721650 1721652 . + 0 transcript_id "g357.t1"; gene_id "g357"; # protein sequence = [MSTSRTITTTRQRSSAAGPSRSRPTPPPPIDLTTHGDPDEDDDNDEAIRRAEEQVHKMKARKAAAAAKKKAEEEAARK # AAEEARKQKEAAARELAERWRVMAEAATAVVGGVLRQAEVRW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g357 ### # start gene g358 Scaffold_2 AUGUSTUS gene 1722569 1723540 0.98 - . g358 Scaffold_2 AUGUSTUS transcript 1722569 1723540 0.98 - . g358.t1 Scaffold_2 AUGUSTUS stop_codon 1722569 1722571 . - 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_2 AUGUSTUS CDS 1722569 1723540 0.98 - 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_2 AUGUSTUS start_codon 1723538 1723540 . - 0 transcript_id "g358.t1"; gene_id "g358"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g358 ### # start gene g359 Scaffold_2 AUGUSTUS gene 1723591 1724628 0.97 - . g359 Scaffold_2 AUGUSTUS transcript 1723591 1724628 0.97 - . g359.t1 Scaffold_2 AUGUSTUS stop_codon 1723591 1723593 . - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_2 AUGUSTUS CDS 1723591 1724628 0.97 - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_2 AUGUSTUS start_codon 1724626 1724628 . - 0 transcript_id "g359.t1"; gene_id "g359"; # protein sequence = [MNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLK # EFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPT # MTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVKQNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQP # RRQQISATAAPFTLFPNESVQIAASIPTPVAGPATPSPANQDFSTQIGQIRELLDRANAMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g359 ### # start gene g360 Scaffold_2 AUGUSTUS gene 1725501 1726472 0.99 - . g360 Scaffold_2 AUGUSTUS transcript 1725501 1726472 0.99 - . g360.t1 Scaffold_2 AUGUSTUS stop_codon 1725501 1725503 . - 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_2 AUGUSTUS CDS 1725501 1726472 0.99 - 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_2 AUGUSTUS start_codon 1726470 1726472 . - 0 transcript_id "g360.t1"; gene_id "g360"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKVGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g360 ### # start gene g361 Scaffold_2 AUGUSTUS gene 1726801 1727679 0.95 - . g361 Scaffold_2 AUGUSTUS transcript 1726801 1727679 0.95 - . g361.t1 Scaffold_2 AUGUSTUS stop_codon 1726801 1726803 . - 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_2 AUGUSTUS CDS 1726801 1727679 0.95 - 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_2 AUGUSTUS start_codon 1727677 1727679 . - 0 transcript_id "g361.t1"; gene_id "g361"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTLTLPLPTLTPWTLMLLIPALGIAGRPSLPVCADDVLVVELKAMLS # RIAHTRRLPADTVDAGDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g361 ### # start gene g362 Scaffold_2 AUGUSTUS gene 1732453 1732944 0.87 + . g362 Scaffold_2 AUGUSTUS transcript 1732453 1732944 0.87 + . g362.t1 Scaffold_2 AUGUSTUS start_codon 1732453 1732455 . + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_2 AUGUSTUS CDS 1732453 1732944 0.87 + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_2 AUGUSTUS stop_codon 1732942 1732944 . + 0 transcript_id "g362.t1"; gene_id "g362"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTLAVDNPPWSLRLGAGLLLELIPNPPSHSPPYGKQPQRRAASESPRDPPPHFDLD # TGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGPAVPADLVVLVDLVVLVLLILLTSPTSNVLCWNSSRVQGFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g362 ### # start gene g363 Scaffold_2 AUGUSTUS gene 1733405 1733953 0.73 + . g363 Scaffold_2 AUGUSTUS transcript 1733405 1733953 0.73 + . g363.t1 Scaffold_2 AUGUSTUS start_codon 1733405 1733407 . + 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_2 AUGUSTUS CDS 1733405 1733953 0.73 + 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_2 AUGUSTUS stop_codon 1733951 1733953 . + 0 transcript_id "g363.t1"; gene_id "g363"; # protein sequence = [MDEAWLNASRTKGALPEPATLAAYRLEVLRIDNVIGSAKKLRSVRLVSLIARNPKKGSSDFKTGSTNQQNNSQPSGSS # APFTPKPKPFSGGKPNNNGKPQNSANSGQSGGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVV # EEDSEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g363 ### # start gene g364 Scaffold_2 AUGUSTUS gene 1734758 1736150 0.67 + . g364 Scaffold_2 AUGUSTUS transcript 1734758 1736150 0.67 + . g364.t1 Scaffold_2 AUGUSTUS start_codon 1734758 1734760 . + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_2 AUGUSTUS CDS 1734758 1735630 0.67 + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_2 AUGUSTUS CDS 1735707 1736150 0.99 + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_2 AUGUSTUS stop_codon 1736148 1736150 . + 0 transcript_id "g364.t1"; gene_id "g364"; # protein sequence = [MEPFYFVLSTQRSRPAPPTALPPLLLSLHSILLSQKSTEFADVFDEIAADSLPEHRPYDLKIDLEEALRRLSAVFILC # LKRLVALKDFIDKQLATGAITPSSSPHGAPVLFVPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWK # TTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSP # DGLTMSKEKVQTVLEWPDIVVPMTRLTRKGAPGSGTAAVKRPSKISKSLYFCADTGPLGAESPTYRGTDASDYAIAAILSIQYADGEIHPLAFLSRTL # HAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKILSISLLPRFSPPTGPMVRIFTSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g364 ### # start gene g365 Scaffold_2 AUGUSTUS gene 1738230 1739210 0.54 - . g365 Scaffold_2 AUGUSTUS transcript 1738230 1739210 0.54 - . g365.t1 Scaffold_2 AUGUSTUS stop_codon 1738230 1738232 . - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_2 AUGUSTUS CDS 1738230 1738733 0.99 - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_2 AUGUSTUS CDS 1738914 1739210 0.54 - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_2 AUGUSTUS start_codon 1739208 1739210 . - 0 transcript_id "g365.t1"; gene_id "g365"; # protein sequence = [MSHSRTQTITTPSSTTAGPSRSRPLNPPPADPVNDDDEALEEDDDEAIRQAEETVRRMKARKAAAAARRKAEEEAAKK # AAEEAQRKKEAAARELEERRRPVGGDPDDGDDGDDDDDEDDRTPCERCRSKRIPCLQQAGKRSSTTCKPCHDAKVRCSHSNRPPTVKKEVASHPTGER # LAVLESQVAQLLADNRVLREGQIKSNTYDRHIIKKLEWLMRDAARRRDSPPEMPEPGPSRLPKKRRRVVDSEEEEEDRIVGEKMEKERRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g365 ### # start gene g366 Scaffold_2 AUGUSTUS gene 1745030 1745800 0.75 + . g366 Scaffold_2 AUGUSTUS transcript 1745030 1745800 0.75 + . g366.t1 Scaffold_2 AUGUSTUS start_codon 1745030 1745032 . + 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_2 AUGUSTUS CDS 1745030 1745800 0.75 + 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_2 AUGUSTUS stop_codon 1745798 1745800 . + 0 transcript_id "g366.t1"; gene_id "g366"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEACSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTT # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g366 ### # start gene g367 Scaffold_2 AUGUSTUS gene 1747027 1748352 0.97 + . g367 Scaffold_2 AUGUSTUS transcript 1747027 1748352 0.97 + . g367.t1 Scaffold_2 AUGUSTUS start_codon 1747027 1747029 . + 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_2 AUGUSTUS CDS 1747027 1748352 0.97 + 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_2 AUGUSTUS stop_codon 1748350 1748352 . + 0 transcript_id "g367.t1"; gene_id "g367"; # protein sequence = [MVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISS # PVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQAL # MNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGF # LGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQ # PAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQADGPSICHGLTFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g367 ### # start gene g368 Scaffold_2 AUGUSTUS gene 1751032 1752186 1 + . g368 Scaffold_2 AUGUSTUS transcript 1751032 1752186 1 + . g368.t1 Scaffold_2 AUGUSTUS start_codon 1751032 1751034 . + 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_2 AUGUSTUS CDS 1751032 1752186 1 + 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_2 AUGUSTUS stop_codon 1752184 1752186 . + 0 transcript_id "g368.t1"; gene_id "g368"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNHGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNHDDLDDDSGGLPRGEPG # DPVDLVVLVVPAVPAVLVDLVDLILPYLLTSPTSNVLCWNSSRGSRAPLRPLVPSSPLSAAPDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFND # RPKYFTDQRKVNYTLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFTALVKELQDNFGVYDAQGEAEDALGNLKMKETENIRKYNIRFNTLAASTQLGF # CCPEMGLWTRLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g368 ### # start gene g369 Scaffold_2 AUGUSTUS gene 1754930 1755607 0.68 + . g369 Scaffold_2 AUGUSTUS transcript 1754930 1755607 0.68 + . g369.t1 Scaffold_2 AUGUSTUS start_codon 1754930 1754932 . + 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_2 AUGUSTUS CDS 1754930 1755607 0.68 + 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_2 AUGUSTUS stop_codon 1755605 1755607 . + 0 transcript_id "g369.t1"; gene_id "g369"; # protein sequence = [MVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAI # ILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDHPLPAISARTALSKLYVVNTPGPRSETLFVTTLLPALSVVA # ISPAVTALRLVETSAGSGPTMGFHLHGLHGPSPWTSLSNCQCRMAIQLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g369 ### # start gene g370 Scaffold_2 AUGUSTUS gene 1763690 1763989 0.17 - . g370 Scaffold_2 AUGUSTUS transcript 1763690 1763989 0.17 - . g370.t1 Scaffold_2 AUGUSTUS stop_codon 1763690 1763692 . - 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_2 AUGUSTUS CDS 1763690 1763989 0.17 - 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_2 AUGUSTUS start_codon 1763987 1763989 . - 0 transcript_id "g370.t1"; gene_id "g370"; # protein sequence = [MMRSGTSSISLHERLVASETRRKIKHMYKIIKEYIHEDGTFLFIQSFLEDLLMFCSLGPSGTSPEKLTRIRDGFEKGE # DLNKLTDIVDSPNYTATPNFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g370 ### # start gene g371 Scaffold_2 AUGUSTUS gene 1769435 1770868 0.44 - . g371 Scaffold_2 AUGUSTUS transcript 1769435 1770868 0.44 - . g371.t1 Scaffold_2 AUGUSTUS stop_codon 1769435 1769437 . - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_2 AUGUSTUS CDS 1769435 1770868 0.44 - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_2 AUGUSTUS start_codon 1770866 1770868 . - 0 transcript_id "g371.t1"; gene_id "g371"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g371 ### # start gene g372 Scaffold_2 AUGUSTUS gene 1770919 1772085 0.89 - . g372 Scaffold_2 AUGUSTUS transcript 1770919 1772085 0.89 - . g372.t1 Scaffold_2 AUGUSTUS stop_codon 1770919 1770921 . - 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_2 AUGUSTUS CDS 1770919 1772085 0.89 - 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_2 AUGUSTUS start_codon 1772083 1772085 . - 0 transcript_id "g372.t1"; gene_id "g372"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g372 ### # start gene g373 Scaffold_2 AUGUSTUS gene 1781935 1783173 0.99 - . g373 Scaffold_2 AUGUSTUS transcript 1781935 1783173 0.99 - . g373.t1 Scaffold_2 AUGUSTUS stop_codon 1781935 1781937 . - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_2 AUGUSTUS CDS 1781935 1783173 0.99 - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_2 AUGUSTUS start_codon 1783171 1783173 . - 0 transcript_id "g373.t1"; gene_id "g373"; # protein sequence = [MALSKWFLCGSRISGPNNSPPSTSLGGFDKDEQLALIFASKAAHKGLPSAEFAMGYYHEVGIGGPIDLDEALRWYALA # QRHGNTDAGERLAALSQPAPQVLSRVEHDEITESKLVRSRTRAKERSEAQKVRDGYLAGQPQPQAQAQVQGQGQGQGQGRRRDSRQVVDLIRKNTLGS # YQPQPQPQLQQAHGRYHTEHGNTLPPNQVGITISRPPSAHPHPQSQPPHQTHPYQPQSQPQIPPPYTQPPLPSSSSSTTQNPNQNPHPIPTQNPNPTL # RPGPGAPGGSQSYPTANRYTLVDPGSGSAPRSDSRSPSNRGDRGDRNDRGDTRSPSTGPGGPGSRPPPRRGPSGGIVVSGGVSTSPYNPSNPTTGPTG # VPGAPPPTAAVSPPRPTGPQTFAEMGISGAKAEDEKCVVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g373 ### # start gene g374 Scaffold_2 AUGUSTUS gene 1784338 1784980 0.6 + . g374 Scaffold_2 AUGUSTUS transcript 1784338 1784980 0.6 + . g374.t1 Scaffold_2 AUGUSTUS start_codon 1784338 1784340 . + 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_2 AUGUSTUS CDS 1784338 1784367 0.63 + 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_2 AUGUSTUS CDS 1784426 1784980 0.72 + 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_2 AUGUSTUS stop_codon 1784978 1784980 . + 0 transcript_id "g374.t1"; gene_id "g374"; # protein sequence = [MLAQATTLHGRQKERKFTLAGISGSTFCARGATSGSSRCGALPPSVVVTVGGGGDENVDENVNVEDVEDEKVEDTDDG # SAGGGGTNDGTNSKLLFSCSESTGGSDGCDGSDGCDGCEGSDGCKGCDGGTGGGGTGKELMDFRFGKSGVGVNNRYLNRARVSCYCFLLLVTVTVTVS # CYCWMLLVLLDGLNVCYN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g374 ### # start gene g375 Scaffold_2 AUGUSTUS gene 1793714 1794073 1 - . g375 Scaffold_2 AUGUSTUS transcript 1793714 1794073 1 - . g375.t1 Scaffold_2 AUGUSTUS stop_codon 1793714 1793716 . - 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_2 AUGUSTUS CDS 1793714 1794073 1 - 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_2 AUGUSTUS start_codon 1794071 1794073 . - 0 transcript_id "g375.t1"; gene_id "g375"; # protein sequence = [MSSEDIAEEIRNSFPGTEEVIVQYLSGYLVDDAGEEEDVLQVAREMLESLAGGQNAELEKLMNRLGDLLEDMLIARQK # RKTGPKLLQKLDKVMDMSKTQISSTIALGEGVDLESINKGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g375 ### # start gene g376 Scaffold_2 AUGUSTUS gene 1799858 1800942 0.29 + . g376 Scaffold_2 AUGUSTUS transcript 1799858 1800942 0.29 + . g376.t1 Scaffold_2 AUGUSTUS start_codon 1799858 1799860 . + 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_2 AUGUSTUS CDS 1799858 1800045 1 + 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_2 AUGUSTUS CDS 1800152 1800359 0.44 + 1 transcript_id "g376.t1"; gene_id "g376"; Scaffold_2 AUGUSTUS CDS 1800433 1800942 0.73 + 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_2 AUGUSTUS stop_codon 1800940 1800942 . + 0 transcript_id "g376.t1"; gene_id "g376"; # protein sequence = [MATTETKGPYQPPSGYLGNLNAEQQSALDQLKKELKEQKETGFALEGEDGFAEARMGDAGLLRKFNVAAAKAMWLANE # KWRKEFGVDEIVKWVLLGISSFEACILANADSRRSFEYHEKAEVDKYYPQFYHKDGRPLYIERLGSLDIDALYSVTTADRQLKRLVYEYERSMTERLP # ACSALVGHPVSTYCTILDLKDVSLRSFYRVKDYVMSAASIGQDHYPETMGKFYIINAPFLFTGVWSVVKPWLDEVTVAKIQVLGAKNKDVLLTQIPEE # NLPKSLGGTCQCSEGCSMSDAGPWIRP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g376 ### # start gene g377 Scaffold_2 AUGUSTUS gene 1801347 1803014 0.21 + . g377 Scaffold_2 AUGUSTUS transcript 1801347 1803014 0.21 + . g377.t1 Scaffold_2 AUGUSTUS start_codon 1801347 1801349 . + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_2 AUGUSTUS CDS 1801347 1801376 0.34 + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_2 AUGUSTUS CDS 1801482 1801737 0.56 + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_2 AUGUSTUS CDS 1801802 1801971 0.57 + 2 transcript_id "g377.t1"; gene_id "g377"; Scaffold_2 AUGUSTUS CDS 1802118 1803014 0.77 + 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_2 AUGUSTUS stop_codon 1803012 1803014 . + 0 transcript_id "g377.t1"; gene_id "g377"; # protein sequence = [MSSSEGESFGSTKAKASIVPKAKASKSQAAGKAKAPSKKKVLADHNDNAEKDATDEDERMEMDDDVPEMQSTDAPARK # KKSVSDTFQKVCFSCATDSYIGSVEHITQAMWTYDVNTKRMVHRDVRYVPGFFKIVDEILVNAADNKVRRALHQIYIPELVFGHLLSGSNYDDDEKKL # TGGRNGYGAKLANIYSHEFTIETADKSTSQKYKQTWTENMSKCGKAKITKNGKGEEFTRVTFRPDLQRFGMDSIDEDTAGLLRRRVYDMAGTVKDVKV # FLNDEKLKIKNFKSYVDLYLNSATAEAAEHSGGAAQNKPTVIYEQISSRWEVAFAVSDGNFMQVSFANSISTSKGGTHVNLIADQIAKNLITAIGKKN # KAATVKAGQIKNHMWVFINALIENPTFDSQTKETLTLPSSKFGTRPVLSEEFMKKGEYFLLFLYLPSNISTQSRNLLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g377 ### # start gene g378 Scaffold_2 AUGUSTUS gene 1803068 1804021 0.56 + . g378 Scaffold_2 AUGUSTUS transcript 1803068 1804021 0.56 + . g378.t1 Scaffold_2 AUGUSTUS start_codon 1803068 1803070 . + 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_2 AUGUSTUS CDS 1803068 1803451 0.67 + 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_2 AUGUSTUS CDS 1803671 1804021 0.64 + 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_2 AUGUSTUS stop_codon 1804019 1804021 . + 0 transcript_id "g378.t1"; gene_id "g378"; # protein sequence = [MEASVVGKSPALFNDSKSQTYSRLTGLPKLSDANNAGTKNAKDCTLILTEGDSAKALAIAGLGVVGRNNFGVFPLRGK # LLNVREARHDQIMKNEEIQNIKKIMGLQHNKDYSNVSSLRYGRLMIMTDQASKGKQHRDFFTIPEYEQWAQEVPGADKWDTKYFKVGIFVTTFVLVLT # VMKGLGTSTDADARGYFSNMAKHVIPFAPTQEGDRELIELAFSKKKADDRKEWLRQFKVSTIISSSLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g378 ### # start gene g379 Scaffold_2 AUGUSTUS gene 1805073 1806122 0.37 + . g379 Scaffold_2 AUGUSTUS transcript 1805073 1806122 0.37 + . g379.t1 Scaffold_2 AUGUSTUS start_codon 1805073 1805075 . + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_2 AUGUSTUS CDS 1805073 1805239 0.59 + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_2 AUGUSTUS CDS 1805397 1805402 0.68 + 1 transcript_id "g379.t1"; gene_id "g379"; Scaffold_2 AUGUSTUS CDS 1805476 1805764 0.57 + 1 transcript_id "g379.t1"; gene_id "g379"; Scaffold_2 AUGUSTUS CDS 1805817 1806122 0.7 + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_2 AUGUSTUS stop_codon 1806120 1806122 . + 0 transcript_id "g379.t1"; gene_id "g379"; # protein sequence = [MDAKELVKAEEKGLPEYFKLISKISTSNMICFDLDGKIRKYDSPEAILEEFYPVRFSFKANASADEIDAEAEDEDKGS # NSDYDYLLNMPIYSLTKEKVFYWFLLALLPDFLIYWQIEKLRKQAADQEAEIMVLLKKSPKDIWNEDLEKFLDEWRKTEDEFQQKMAASTAAVKKGKR # KQAVLQTRKSLGGGGNRGNNDSDDDFQPVKAAAKKRAPAVPASSKTTKAKTKKENSDDEEDASELPKKPATKKLLPDQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g379 ### # start gene g380 Scaffold_2 AUGUSTUS gene 1806253 1806672 0.99 + . g380 Scaffold_2 AUGUSTUS transcript 1806253 1806672 0.99 + . g380.t1 Scaffold_2 AUGUSTUS start_codon 1806253 1806255 . + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_2 AUGUSTUS CDS 1806253 1806672 0.99 + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_2 AUGUSTUS stop_codon 1806670 1806672 . + 0 transcript_id "g380.t1"; gene_id "g380"; # protein sequence = [MLYLSPDIDDDEEEEEEIVHPPKKKKIQEYFSGKTSSNTVTGESSNGSPPAAKTNSNPAQARKVSKSMKPASPPKPKK # ARPAVIKSDSEDDMDLYDDLPKPPPRAASSRAARGKAKAYIDIASDDDEGDGSLFVDEIEP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g380 ### # start gene g381 Scaffold_2 AUGUSTUS gene 1808990 1809742 0.9 - . g381 Scaffold_2 AUGUSTUS transcript 1808990 1809742 0.9 - . g381.t1 Scaffold_2 AUGUSTUS stop_codon 1808990 1808992 . - 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_2 AUGUSTUS CDS 1808990 1809223 0.95 - 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_2 AUGUSTUS CDS 1809275 1809742 0.94 - 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_2 AUGUSTUS start_codon 1809740 1809742 . - 0 transcript_id "g381.t1"; gene_id "g381"; # protein sequence = [MIQDVPGTGLIGLGPSKGSAILGLLNSSAGDPPLDRIFKQNTSTPNILTIVLSRNEENSTVPEMSNQLVPLLEDQPGQ # ITIGEVIGGYEEVAEQPKLPALVDGSGLNQHWMTLLDSNGIIGPDGNRINTTSSKSNLTQGKSDQLRVVFDSGFSFPQVPADIADDFYGRVPGAFFNE # TIAYWQVPCSYELNVSFIFASVEYPIHPLDMTAFNGVDETTGRMSVWDGLVILCFYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g381 ### # start gene g382 Scaffold_2 AUGUSTUS gene 1810934 1811875 0.97 + . g382 Scaffold_2 AUGUSTUS transcript 1810934 1811875 0.97 + . g382.t1 Scaffold_2 AUGUSTUS start_codon 1810934 1810936 . + 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_2 AUGUSTUS CDS 1810934 1811302 1 + 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_2 AUGUSTUS CDS 1811357 1811875 0.97 + 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_2 AUGUSTUS stop_codon 1811873 1811875 . + 0 transcript_id "g382.t1"; gene_id "g382"; # protein sequence = [MAPSASKQKRLAEKAAKKAAGVGDASTSTSTPTGSVNGSTGVNTPMTSVSAATSSEDLTNMAKLKIATDRSASGVLVS # DVKARDIKIDQYTLSFHGRLLIEGAEIALNYGQRYGLLGENGSGKSTFLQSIAERDIEIPQHIDIYLVRGEVEPSNVNAVEFIVASAKAKVEKLEKYI # EELSVSDDPDAELALDAAYEELEELDPSTFETKAASILHGLGFGQEMMKKATKDMSGGWRMRVALARALFVKPHLLLLDEPTNHLDLGAVVWLEAYLS # TYNHILVITSHSQVRFSYFLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g382 ### # start gene g383 Scaffold_2 AUGUSTUS gene 1814294 1816240 0.14 + . g383 Scaffold_2 AUGUSTUS transcript 1814294 1816240 0.14 + . g383.t1 Scaffold_2 AUGUSTUS start_codon 1814294 1814296 . + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_2 AUGUSTUS CDS 1814294 1814710 0.27 + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_2 AUGUSTUS CDS 1814788 1814933 0.54 + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_2 AUGUSTUS CDS 1815397 1816240 0.81 + 1 transcript_id "g383.t1"; gene_id "g383"; Scaffold_2 AUGUSTUS stop_codon 1816238 1816240 . + 0 transcript_id "g383.t1"; gene_id "g383"; # protein sequence = [MAGFPVGMPAPHNPFPNRNRRQLSIGGPPKAVLGGPQRKLSPNPPPSSGVISTGVSGSTTPLGPPPNSAPTVKVKKHI # VNLPKETIPSDEEGVPAIKAEFARVPLKPEEVVDITELWYPELMTCEEFPPEDFRHLIPPTIAWERLKHAAIEQKLEQLGVERGGSSSASSFVQPYAL # HGRAASVRGSILTPSTGATSNPFGPNAVLGNDQNTIRGSVSPSLPEVDSASDSNIHAPQGRKPVLMSTLVSSDPSALVPPLSAVRTDSRPDFARGFGL # DIPEEAEEESEDLEDDELKIPSWAQHRDIVDQQKVLSQPEEEEDDNRDDRSLEEGEREEMESNGLLTASQSRHHSRHASHLSAALSLRSFGGLVADGL # NERLAEMRSASDSGSLGLATAMGTGTFGVGRGQIPLNIPPKDKELEEWTGSEDVDGYGHVDDEEDSDDEVGIFAIMFSVTERTDFPEHRRMVQSFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g383 ### # start gene g384 Scaffold_2 AUGUSTUS gene 1816371 1817774 1 + . g384 Scaffold_2 AUGUSTUS transcript 1816371 1817774 1 + . g384.t1 Scaffold_2 AUGUSTUS start_codon 1816371 1816373 . + 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_2 AUGUSTUS CDS 1816371 1817774 1 + 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_2 AUGUSTUS stop_codon 1817772 1817774 . + 0 transcript_id "g384.t1"; gene_id "g384"; # protein sequence = [MHPHEDDVISNPSEEEHGRYLGLDLRYPPSGSSTSRPLPPLPSHHSRGPSSQSGIHSVHDPARAHSRVASVGANEDAQ # PTKVNLNPNAKPFMFGARGGNNAGFSFSGVAPNAPVVSHSRLPSSSNSASFASKLNASAAEFKPGSGFSFRAPFPAPSVVLTVPPVFPTPTPGFPEPQ # HQTDGRPLPLPSAALHAGPDTAIKEFVLNVAEGSPFRVQGREKRQRRDHSPSGSDAELVEGDSMASFRFPSNFGSPASLRIGVPPSPRRNHHGRGQSA # RTSDSKLSASLNPNAEPFTFAGFSNAVGTLPHIGGLASAKETSPKEDQEDSDDEDKENNANIGVEDVFSLPASTKSKRAPIPLTFKQTISNNTVPAGL # FKALANHSNSNSTDERTRPTVRSRLSSREQRTREFGREVEREIEREFYEQGSRPSLDDLGVDMPAISHKISRPRLVTDPAKFIPSPTVSAWLPSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g384 ### # start gene g385 Scaffold_2 AUGUSTUS gene 1817917 1820742 0.42 + . g385 Scaffold_2 AUGUSTUS transcript 1817917 1820742 0.42 + . g385.t1 Scaffold_2 AUGUSTUS start_codon 1817917 1817919 . + 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_2 AUGUSTUS CDS 1817917 1819632 0.67 + 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_2 AUGUSTUS CDS 1819803 1820221 0.62 + 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_2 AUGUSTUS CDS 1820280 1820742 0.62 + 1 transcript_id "g385.t1"; gene_id "g385"; Scaffold_2 AUGUSTUS stop_codon 1820740 1820742 . + 0 transcript_id "g385.t1"; gene_id "g385"; # protein sequence = [MSEVSSLAGPVAKDLHARLEMRRHEDRLENLLDQKLTALFRDLKTAISNTSFQQQGLTLKAEEMISDVVSLFRTQLTD # SATRGLDETHLDARGELDFELIKDVVEQGHTKILDLITRELNTFQSQTHSRGLTEPDSAPQPDLTKAFEHYSSRTIIAVVEAISELSTRLETITRGAP # SREHDQLVDAIVSALNPAFNAIRPEIVDYDFLTSKLTQAVKPHISQIIDLASDKRETAGLIVDRLLPVLLPILQQYSSAAPDTDAIALQLTTEVRRAI # APIDAFEIKEQVADLVVERLDSRLAVRDKSFNVDTITSKITETVSRLFDPWAENLSHIADGQKSLSGQQSDLSSSYQRLVELIGALPAQVNTAMETQI # LEASSEKRMVSDQSIVNINNTLSDIASNQQSLAGHSTEVLQLSKDVLSRVSALPDSISAAITVLQTSHSDILLTRDQTRHEMEDLRKSNTDLQVQLHK # ARGAHGQIRVEKDMLNEKVNILEADRERLKAQAKELQATVDLRTTDIAHVEGKNINLEEALAKALGRLQASDVATQANMDRIAALEKANAELMAERQS # LKVKKHWDDLRRASEQIEHLTNLIGQADNEELNELRRARDRSRILEGEHAALQKRYKEQENRTVASEKAAISVKQSLAQAQARASEWEKRAKESEAKL # ERTTTQLEQAEQTHSQLDADFLVVKMQLEDREADERLAKVSQHFMMLRDEVSALETKTRKLQVELEKARVALRNPMSGSHSKASNGSVYSSSRPDSRS # STVFIDRSITPNGRSPSTGSITPPHNSTSVWDSIHAPSATPARNGHSGIKNTVYAPSGRYPQTLSRGHSRPPLQYARSSIASPTPSTVSLAPTVDEEG # WWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g385 ### # start gene g386 Scaffold_2 AUGUSTUS gene 1822196 1822699 0.47 - . g386 Scaffold_2 AUGUSTUS transcript 1822196 1822699 0.47 - . g386.t1 Scaffold_2 AUGUSTUS stop_codon 1822196 1822198 . - 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_2 AUGUSTUS CDS 1822196 1822699 0.47 - 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_2 AUGUSTUS start_codon 1822697 1822699 . - 0 transcript_id "g386.t1"; gene_id "g386"; # protein sequence = [MSRSTRINVVLRLSLPLLLPPFLLSFLLVDTALSKIEEVPLVITSEAESFKKTKEAVTLLKGLHAYQDVVKVSNSRKL # RAGKGKLRNRRHRQRRGPLVVYNEDNGIVKAFRNLPGVEVVNVRRLNLLQLAPGGHLGRFVIWTEGAFGLLDEVFGTFDKASAYKKDYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g386 ### # start gene g387 Scaffold_2 AUGUSTUS gene 1837674 1839502 0.06 + . g387 Scaffold_2 AUGUSTUS transcript 1837674 1839502 0.06 + . g387.t1 Scaffold_2 AUGUSTUS start_codon 1837674 1837676 . + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS CDS 1837674 1837680 0.32 + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS CDS 1837831 1837986 0.61 + 2 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS CDS 1838090 1838200 0.42 + 2 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS CDS 1838307 1838659 0.78 + 2 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS CDS 1839056 1839502 0.63 + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_2 AUGUSTUS stop_codon 1839500 1839502 . + 0 transcript_id "g387.t1"; gene_id "g387"; # protein sequence = [MAPAVIIEQYNKELEEERRSLAARNGDQEDDSEEEESGLDEDEDEDRDRDEELSTGSPAEEAMSDGRKRQRKAGADTD # FHTCYINSNATHLEYSKIELPISLQFYYTCSTEKKILKNRIPARTEIWTFDFTQHHSTFEAQLLERSRIFYHPKQILVSDYDISYSIPRIAPNPISID # GINSYPPLVESARRNINKAGQLVIYVVSKFSDQLDGPETATIEKPPNDRRFTVTNDANLGQPTILQSRQARREAAAAPSSLSLNISPDVIALFRPPAP # GPAPLSSLLLSHDRAPGPHMSITDFVIQARIAPDIATKLSVQGYTDTNALQFAQIEDLKEIGLLPGYIAQLRFAVANWSVSRT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g387 ### # start gene g388 Scaffold_2 AUGUSTUS gene 1843367 1844062 0.65 - . g388 Scaffold_2 AUGUSTUS transcript 1843367 1844062 0.65 - . g388.t1 Scaffold_2 AUGUSTUS stop_codon 1843367 1843369 . - 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_2 AUGUSTUS CDS 1843367 1844062 0.65 - 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_2 AUGUSTUS start_codon 1844060 1844062 . - 0 transcript_id "g388.t1"; gene_id "g388"; # protein sequence = [MINVPYMSAVGSLLFLSMIIRADTAYATGVLTRFNSNPGPAHWLAVKHLLRYLKGTIDYELELGPDPTAPDLITAISD # SDLGGNKDNGKSTTGYIIKIGSGAVSWSSKLQPVVTLSSTEAEFVASNAVGKEVLAIRSLLTELGYKVASPTIIHVDNQSSIQVAKNPEHHGRMKHLD # RTFYWLREQVIHGKLAPSYLPTEDNQQTCSQRPLQFKGRQVPNYDRTCQTYNLRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g388 ### # start gene g389 Scaffold_2 AUGUSTUS gene 1844603 1845690 0.36 - . g389 Scaffold_2 AUGUSTUS transcript 1844603 1845690 0.36 - . g389.t1 Scaffold_2 AUGUSTUS stop_codon 1844603 1844605 . - 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_2 AUGUSTUS CDS 1844603 1844955 0.4 - 2 transcript_id "g389.t1"; gene_id "g389"; Scaffold_2 AUGUSTUS CDS 1845084 1845690 0.61 - 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_2 AUGUSTUS start_codon 1845688 1845690 . - 0 transcript_id "g389.t1"; gene_id "g389"; # protein sequence = [MLLESGLPKTFWVECLAALVYVLNRCPTSAVPDVTPYEVFYKKKPNVENLRVWGCMAYVHVQKDKRLHLGSHMEKCVF # IGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTPKQQPLKVTSSAPNELFTLPIPIDESESDSESNSEVDKGNAPNS # PRLEHTPGPDIPVTEDESDEQPIAIRPSTTQVEPRNYREAMHSSEAFKWEEAMNDEISAHLANNTWDIVDLPPGAKAIGSTWVFRIKHNADGSIERFK # ARLCAQGFSQRPGFDYLETYASTLRWSSLRLVLALAAIDDMELLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g389 ### # start gene g390 Scaffold_2 AUGUSTUS gene 1845934 1847502 0.78 - . g390 Scaffold_2 AUGUSTUS transcript 1845934 1847502 0.78 - . g390.t1 Scaffold_2 AUGUSTUS stop_codon 1845934 1845936 . - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_2 AUGUSTUS CDS 1845934 1847502 0.78 - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_2 AUGUSTUS start_codon 1847500 1847502 . - 0 transcript_id "g390.t1"; gene_id "g390"; # protein sequence = [MSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQVPIKAHQEDPIRMWSILEQQHVSKKPGARFN # AYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMALIRALPEEYRHLSSNLLMQDNLDKEKILAAFLA # EQQNQEHAEQQSVNRAAQAASSSNKKKNNYRAPVRTGEPKDYCKWCGKKAVHWQEDCPSNPHNKRKGIQANKAKVTEVDDDGVTESAGSATASSLSNV # LSASSFADTMEWNTDTGATSHMTPHRNWIRNYTPHRVPIRLADHTVVYSEGMGEVLFTPIVDGKEARQVLFSRVLHVPSLNNNLLSVLYLTKHKGFTV # QILKDTMEFTLNGSVLFTASVNNKSVGYLNGLTISNGTEDESAHIGGTTLPLNLELWHRRFFHYNYGDVSKLSKNKMVEGFKLESSAKPDPVCEPCLG # GKMHANPSPVLRPALLKCWNLSLRMYMTLVSSHMKATAIGFRSSAIRHALEQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g390 ### # start gene g391 Scaffold_2 AUGUSTUS gene 1851234 1851688 0.45 - . g391 Scaffold_2 AUGUSTUS transcript 1851234 1851688 0.45 - . g391.t1 Scaffold_2 AUGUSTUS stop_codon 1851234 1851236 . - 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_2 AUGUSTUS CDS 1851234 1851409 0.94 - 2 transcript_id "g391.t1"; gene_id "g391"; Scaffold_2 AUGUSTUS CDS 1851504 1851540 0.94 - 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_2 AUGUSTUS CDS 1851635 1851688 0.46 - 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_2 AUGUSTUS start_codon 1851686 1851688 . - 0 transcript_id "g391.t1"; gene_id "g391"; # protein sequence = [MSIDLYFNYSRNTGLFGLLSYELLKLRNEVLCSTHPPSKRKRRAVSSQPIFNQDQENGEDMVSISCSLFLDILNPPSV # EKHCLNIKQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g391 ### # start gene g392 Scaffold_2 AUGUSTUS gene 1864928 1865566 0.7 - . g392 Scaffold_2 AUGUSTUS transcript 1864928 1865566 0.7 - . g392.t1 Scaffold_2 AUGUSTUS stop_codon 1864928 1864930 . - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_2 AUGUSTUS CDS 1864928 1865254 0.96 - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_2 AUGUSTUS CDS 1865295 1865326 0.91 - 2 transcript_id "g392.t1"; gene_id "g392"; Scaffold_2 AUGUSTUS CDS 1865393 1865396 0.89 - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_2 AUGUSTUS CDS 1865549 1865566 0.72 - 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_2 AUGUSTUS start_codon 1865564 1865566 . - 0 transcript_id "g392.t1"; gene_id "g392"; # protein sequence = [MTKVNILMITRSDEALCNFEAGRAGYHLPYHKGDPFYQGTDILFCSQQVGDPVTLLKEYATARDKLHGARPALFILED # GNVPTRGWFDSMFFAVLSKEFGGHSGRAGGRYFLCWTRTSRDDHHGPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g392 ### # start gene g393 Scaffold_2 AUGUSTUS gene 1866696 1867541 0.95 + . g393 Scaffold_2 AUGUSTUS transcript 1866696 1867541 0.95 + . g393.t1 Scaffold_2 AUGUSTUS start_codon 1866696 1866698 . + 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_2 AUGUSTUS CDS 1866696 1867541 0.95 + 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_2 AUGUSTUS stop_codon 1867539 1867541 . + 0 transcript_id "g393.t1"; gene_id "g393"; # protein sequence = [MSSTTISTTPSFKVLTKDNYNDWQGNMKASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQ # VPIKAHQEDPIRMWSILEQQHVSKKPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPVPGFTLDSLDSELQSMALI # RALPEEYKHLSSNLLLQDNLDKEKILAAFLAEQQNQEHAEQQSLNRAAQVATSSNKKKNSYRNPPRTGDPKDYCKWCGKKAVHWPEDCPSNPHNKRKA # FRPIKLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g393 ### # start gene g394 Scaffold_2 AUGUSTUS gene 1868125 1868556 0.56 + . g394 Scaffold_2 AUGUSTUS transcript 1868125 1868556 0.56 + . g394.t1 Scaffold_2 AUGUSTUS start_codon 1868125 1868127 . + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_2 AUGUSTUS CDS 1868125 1868556 0.56 + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_2 AUGUSTUS stop_codon 1868554 1868556 . + 0 transcript_id "g394.t1"; gene_id "g394"; # protein sequence = [MVEGFKLESSAKPDPVCEPCLGGKMHANPFPSTETRASEVLELVFTDVHDTGIISHEGYRYWIPFICDKARFRAVIPM # KKKSDAFAAFKRFKAWAEKVTGLKVKILRHDKGGEYISKEFEKFLQDEGSKYNVQLEIDLTKWSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g394 ### # start gene g395 Scaffold_2 AUGUSTUS gene 1868594 1869511 0.83 + . g395 Scaffold_2 AUGUSTUS transcript 1868594 1869511 0.83 + . g395.t1 Scaffold_2 AUGUSTUS start_codon 1868594 1868596 . + 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_2 AUGUSTUS CDS 1868594 1869511 0.83 + 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_2 AUGUSTUS stop_codon 1869509 1869511 . + 0 transcript_id "g395.t1"; gene_id "g395"; # protein sequence = [MLLESGLPKTFWVECLAALVYVLNRCPTSAVPDVTPYEVFYKKKPNVENLRVWGCMAYVHVQKDKRLHLGSHMEKCVF # IGYPEGVKGWKFWKPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTPKQQPLKVTSSAPNELFTLPIPIDESESDSESNSEVDKGNAPNS # PRLEHTPGPDIPVTEDESDELPIAIRRPARNRKPPGEWWKTKPSSSRVPAPNDDSDDSNDDYYGDAELASISTQQVEPRNYREAMHSSEAFKWEEAMN # DEISAHLANNTWDIVDLPPGEKAIGLLGYSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g395 ### # start gene g396 Scaffold_2 AUGUSTUS gene 1870095 1870661 0.94 + . g396 Scaffold_2 AUGUSTUS transcript 1870095 1870661 0.94 + . g396.t1 Scaffold_2 AUGUSTUS start_codon 1870095 1870097 . + 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_2 AUGUSTUS CDS 1870095 1870661 0.94 + 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_2 AUGUSTUS stop_codon 1870659 1870661 . + 0 transcript_id "g396.t1"; gene_id "g396"; # protein sequence = [MRSNTSFETGRVQYADSKPVKTPLNPTVSLSKEDSPKTPEDKEAMINIPYMSAVGSLLFLAMILRADIAFATGVLTRF # NSNPGPAHWLAVKHLLRYLKGTIDYELELGPDPTAPDLITAISDADLGGNKDNGKSTTGYIIKIGSGAVSWSSKLQPVVTLSSTEAEFVASNAVGKEV # LAISFSPHRAWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g396 ### # start gene g397 Scaffold_2 AUGUSTUS gene 1872719 1873765 0.74 - . g397 Scaffold_2 AUGUSTUS transcript 1872719 1873765 0.74 - . g397.t1 Scaffold_2 AUGUSTUS stop_codon 1872719 1872721 . - 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_2 AUGUSTUS CDS 1872719 1873126 0.76 - 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_2 AUGUSTUS CDS 1873492 1873523 0.79 - 2 transcript_id "g397.t1"; gene_id "g397"; Scaffold_2 AUGUSTUS CDS 1873590 1873593 0.79 - 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_2 AUGUSTUS CDS 1873748 1873765 0.83 - 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_2 AUGUSTUS start_codon 1873763 1873765 . - 0 transcript_id "g397.t1"; gene_id "g397"; # protein sequence = [MTRVNILMITRSDEALCNVQLLVFWDMILCPYEDKKQEHGVTLKIIGFWVDIVKGSISLSSESIQGLVADITSFLSSP # KRQAALRDWQHLAGSLNWSLNVLPWARPALTEMYRKMSGKTLQFRAIPINGEVYRDLTWFSDLLQTAIGIRFVDA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g397 ### # start gene g398 Scaffold_2 AUGUSTUS gene 1874074 1875311 0.61 + . g398 Scaffold_2 AUGUSTUS transcript 1874074 1875311 0.61 + . g398.t1 Scaffold_2 AUGUSTUS start_codon 1874074 1874076 . + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_2 AUGUSTUS CDS 1874074 1874599 0.71 + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_2 AUGUSTUS CDS 1874680 1875311 0.61 + 2 transcript_id "g398.t1"; gene_id "g398"; Scaffold_2 AUGUSTUS stop_codon 1875309 1875311 . + 0 transcript_id "g398.t1"; gene_id "g398"; # protein sequence = [MSSTTISTTPSFKVLTKDNYNDWREHEASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQV # PIKAHQEDPIRMWSILEQQHVSKKPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMALIP # FLAEQQNQEHAEQQSLNRAAQVATSSNKKKNSYRNPPRTGDPKDYCKWCGKKAVHWPEDCPSNPHNKKKGIQANKAKVTEVDDDGVTESAGSATASSL # SNGLSASSFADTMQWNTDTGATSHMTPHRNWIRNYTPHRVPIRLADHTVVYSEGIGEVCSLQLLMAKKLDKFYFLESYMFLHLITISSLFYILPSTKV # LLYKSSGYYGVYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g398 ### # start gene g399 Scaffold_2 AUGUSTUS gene 1875876 1876889 0.8 + . g399 Scaffold_2 AUGUSTUS transcript 1875876 1876889 0.8 + . g399.t1 Scaffold_2 AUGUSTUS start_codon 1875876 1875878 . + 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_2 AUGUSTUS CDS 1875876 1876889 0.8 + 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_2 AUGUSTUS stop_codon 1876887 1876889 . + 0 transcript_id "g399.t1"; gene_id "g399"; # protein sequence = [MKDRSTTYARNRPQQNGVAERLNRTLAELLTAMLLESGLPKTFWVECLAALVYVLNRCPTSAVPDVTPYEVFYKKKPN # VENLRVWGCMAYVHVQKDKRLHLGSHMEKCVFIGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTPKQQPLKVTSSA # PNELFTLPIPIDESESDSESNSEVDKGNAPNSPRLEHTPGPDIPVTEDESDELPIAIRRPARNRKPPGEWWKTKPSSSRVPAPNDDSDDSNDDYYGDA # ELASISTQQVEPRNYREAMHSSEAFKWEEAMNDEISAHLANNTWDIVDSHQEESNWVYLGIPD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g399 ### # start gene g400 Scaffold_2 AUGUSTUS gene 1877106 1878302 0.94 + . g400 Scaffold_2 AUGUSTUS transcript 1877106 1878302 0.94 + . g400.t1 Scaffold_2 AUGUSTUS start_codon 1877106 1877108 . + 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_2 AUGUSTUS CDS 1877106 1878302 0.94 + 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_2 AUGUSTUS stop_codon 1878300 1878302 . + 0 transcript_id "g400.t1"; gene_id "g400"; # protein sequence = [MKQPEGFKQGGPEKVCRLNKSIYGLKQSPRLWSEKLCSVLVKLGFKRLESDPCVYLFQRGNIKVIVPVWVDDITLACK # DPGVLDKFVIELSKELKLRDLGETTFLLGIGIRRDRPNRKLYLNAKQYIIRKLEEFSMQDSKPVKTPLNPTVSLSKEDSPKTPEDKEAMINIPYMSAV # GSLLFLAMILRADIAFATGVLTRFNSNPGPAHWLAVKHLLRYLKGTIDYELELGPDPTAPDLITAISDADLGGNKDNGKSTTGYIIKIGSGAVSWSSK # LQPVVTLSSTEAEFVASNAVGKEVLAIRSLLTELGYKVASPTIIHVDNQSSIQVAKNPEHHGRMKHLDRTFYWLREQVIHGKLALLMPTEDNPADLLT # KALVKQKVEKFRTMIGLVKPSTSDDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g400 ### # start gene g401 Scaffold_2 AUGUSTUS gene 1887290 1888113 0.27 + . g401 Scaffold_2 AUGUSTUS transcript 1887290 1888113 0.27 + . g401.t1 Scaffold_2 AUGUSTUS start_codon 1887290 1887292 . + 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_2 AUGUSTUS CDS 1887290 1887425 0.33 + 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_2 AUGUSTUS CDS 1887617 1888113 0.81 + 2 transcript_id "g401.t1"; gene_id "g401"; Scaffold_2 AUGUSTUS stop_codon 1888111 1888113 . + 0 transcript_id "g401.t1"; gene_id "g401"; # protein sequence = [MPPRTQAQSRANSEENTSFTAAQSFVPFSESISAIGQPRRRNRGFAIARRTGKQPQHCATSQSPRDLPPHSDLDAGDH # DDQDPPVDPDDPGADNNNPDNDDLDDNSGGLPRSDPSGPGGPGGPHSPISPDIPNEQCAMLELLLRFKGSIETLGTILAALLADLLTALNPRAKLRSQ # RYSTVWTPESSRCSLSILPWSSMTIQSTSPTNGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g401 ### # start gene g402 Scaffold_2 AUGUSTUS gene 1898522 1900172 0.08 - . g402 Scaffold_2 AUGUSTUS transcript 1898522 1900172 0.08 - . g402.t1 Scaffold_2 AUGUSTUS stop_codon 1898522 1898524 . - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_2 AUGUSTUS CDS 1898522 1898978 0.59 - 1 transcript_id "g402.t1"; gene_id "g402"; Scaffold_2 AUGUSTUS CDS 1899068 1899255 0.15 - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_2 AUGUSTUS CDS 1899384 1899527 0.58 - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_2 AUGUSTUS CDS 1899636 1900172 0.56 - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_2 AUGUSTUS start_codon 1900170 1900172 . - 0 transcript_id "g402.t1"; gene_id "g402"; # protein sequence = [MVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQQS # SSPFPPPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDHPLPAISARTALSKLYVVNTPGPRSETLFVTTLPLALSVVAI # SPALSSRVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSIVYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNI # TVRPEVDMKSDLAETSISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSP # PPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g402 ### # start gene g403 Scaffold_2 AUGUSTUS gene 1904819 1905151 0.55 - . g403 Scaffold_2 AUGUSTUS transcript 1904819 1905151 0.55 - . g403.t1 Scaffold_2 AUGUSTUS stop_codon 1904819 1904821 . - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_2 AUGUSTUS CDS 1904819 1905151 0.55 - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_2 AUGUSTUS start_codon 1905149 1905151 . - 0 transcript_id "g403.t1"; gene_id "g403"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEDQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARAGQLLELILQFSKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g403 ### # start gene g404 Scaffold_2 AUGUSTUS gene 1905720 1906334 0.61 + . g404 Scaffold_2 AUGUSTUS transcript 1905720 1906334 0.61 + . g404.t1 Scaffold_2 AUGUSTUS start_codon 1905720 1905722 . + 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_2 AUGUSTUS CDS 1905720 1906334 0.61 + 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_2 AUGUSTUS stop_codon 1906332 1906334 . + 0 transcript_id "g404.t1"; gene_id "g404"; # protein sequence = [MEARGMDLTEKLKKNPFAHAETEGEKAATQLMKYVSYIGDHIPGSMSEVQDLREEMFSLVHTNGIPHIFLTLNPSDTN # NPIAQVLAGRDIDLDRFFHDLKPGSENIECTTSVAQNPVAGAQFFHITVQNLLNILLGLKRANQKGIFGEVSVYYGVVEAQGRGSLHIHSLLWLEKGL # SPKDIKQKCDSDPVWLRKLLQWYDDVFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g404 ### # start gene g405 Scaffold_2 AUGUSTUS gene 1906398 1906910 0.7 + . g405 Scaffold_2 AUGUSTUS transcript 1906398 1906910 0.7 + . g405.t1 Scaffold_2 AUGUSTUS start_codon 1906398 1906400 . + 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_2 AUGUSTUS CDS 1906398 1906910 0.7 + 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_2 AUGUSTUS stop_codon 1906908 1906910 . + 0 transcript_id "g405.t1"; gene_id "g405"; # protein sequence = [MSRPLNPYENHFWTKFNQDLRDILENTGMIHEHTGTCYKHLPVNVKTLRDDDKDCRFQLPRDTVKETHFDEDGDLVLR # CNNGFVNGHNPIIVATQRCNMDSKPIGFGTVAMAMFQYFGNYTVKFSMDTAFVFSALCAAIKILSEHPPMDIDGNLDESEHSRQFLIKLSIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g405 ### # start gene g406 Scaffold_2 AUGUSTUS gene 1906949 1907341 0.89 + . g406 Scaffold_2 AUGUSTUS transcript 1906949 1907341 0.89 + . g406.t1 Scaffold_2 AUGUSTUS start_codon 1906949 1906951 . + 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_2 AUGUSTUS CDS 1906949 1907341 0.89 + 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_2 AUGUSTUS stop_codon 1907339 1907341 . + 0 transcript_id "g406.t1"; gene_id "g406"; # protein sequence = [MLIGIPSHYTNCTFPKFYWSGILCKIAYAIFENNDDIALDSGDCDGDSEECNTTLVEHNNDTDNTEDSSFIVLTQKNL # MKQKEDSQALAYNYLFQDFFFRPDDLQGTCVWEQMQDYSKEKLPTVKIMYTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g406 ### # start gene g407 Scaffold_2 AUGUSTUS gene 1908253 1908687 0.67 + . g407 Scaffold_2 AUGUSTUS transcript 1908253 1908687 0.67 + . g407.t1 Scaffold_2 AUGUSTUS start_codon 1908253 1908255 . + 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_2 AUGUSTUS CDS 1908253 1908687 0.67 + 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_2 AUGUSTUS stop_codon 1908685 1908687 . + 0 transcript_id "g407.t1"; gene_id "g407"; # protein sequence = [MGASYAGRTRSRGCSQVSCIFIPEIAHVIESTQNVGFYHVEALSDSIKNCYAHSSTVATSQDRDIADESIKAIAQEKE # NLMSSQAEMAENRMNHHKLSAPFNTIPYPFCTDVQSEIEPSFYNSILIVLNLTGMSLNHINSWQLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g407 ### # start gene g408 Scaffold_2 AUGUSTUS gene 1909644 1909982 0.6 - . g408 Scaffold_2 AUGUSTUS transcript 1909644 1909982 0.6 - . g408.t1 Scaffold_2 AUGUSTUS stop_codon 1909644 1909646 . - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_2 AUGUSTUS CDS 1909644 1909982 0.6 - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_2 AUGUSTUS start_codon 1909980 1909982 . - 0 transcript_id "g408.t1"; gene_id "g408"; # protein sequence = [MAYVHVQKDKRLHLGSHMEKCVFIGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPEPTP # KQQPLKVTSSAPNELFTLPIPIDESESDSDSNSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g408 ### # start gene g409 Scaffold_2 AUGUSTUS gene 1911789 1913429 0.43 + . g409 Scaffold_2 AUGUSTUS transcript 1911789 1913429 0.43 + . g409.t1 Scaffold_2 AUGUSTUS start_codon 1911789 1911791 . + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_2 AUGUSTUS CDS 1911789 1911814 0.51 + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_2 AUGUSTUS CDS 1912577 1912728 0.69 + 1 transcript_id "g409.t1"; gene_id "g409"; Scaffold_2 AUGUSTUS CDS 1912897 1913429 0.66 + 2 transcript_id "g409.t1"; gene_id "g409"; Scaffold_2 AUGUSTUS stop_codon 1913427 1913429 . + 0 transcript_id "g409.t1"; gene_id "g409"; # protein sequence = [MSVSTLYTNNENCPRETKSLIDVRRWVTDPENACPLITYTNAVRDAHNYETAKAFAQVTDNIATELGLSKGSLETLVS # ITYEINQNRHYAVSATVDFPAYKGKNAKHPNRVVLKPISRSFKFSLPNSDRTYSATRSQLPLIPAFAFTSHNSQGRSLNVACIDFTGCRSIQSAYVML # SRVRSLKGLCILRPFHIGKIQNHISEELCQEMRRTHELSLRTEDFARESLAWYYSRFPKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g409 ### # start gene g410 Scaffold_2 AUGUSTUS gene 1931291 1931848 0.34 - . g410 Scaffold_2 AUGUSTUS transcript 1931291 1931848 0.34 - . g410.t1 Scaffold_2 AUGUSTUS stop_codon 1931291 1931293 . - 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_2 AUGUSTUS CDS 1931291 1931848 0.34 - 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_2 AUGUSTUS start_codon 1931846 1931848 . - 0 transcript_id "g410.t1"; gene_id "g410"; # protein sequence = [MLKEHDYAPNVPPLSTIPSSTTHTDGAHSDTDSTDTATNSDDEFNWDEDEDPSTPKSYEKTKAKRGRAIYLAFMKLAR # PVRVFLLGALGAGILITPLIVVQLRFKSNPVRPQVHVWSLWLSIIWAAGCVTYLVVDAIPSLVIAFVVLFGGQVERLKIQLEVCFGSKHVDTLLIYSP # AHSRRLWLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g410 ### # start gene g411 Scaffold_2 AUGUSTUS gene 1933028 1935418 0.18 - . g411 Scaffold_2 AUGUSTUS transcript 1933028 1935418 0.18 - . g411.t1 Scaffold_2 AUGUSTUS stop_codon 1933028 1933030 . - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_2 AUGUSTUS CDS 1933028 1933656 0.36 - 2 transcript_id "g411.t1"; gene_id "g411"; Scaffold_2 AUGUSTUS CDS 1935160 1935418 0.26 - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_2 AUGUSTUS start_codon 1935416 1935418 . - 0 transcript_id "g411.t1"; gene_id "g411"; # protein sequence = [MSMVNFRALSCIERIRHLSIFCAVSLGKRKKPKKAKSKPKHEKSKSEPKQEEAKQEEPKPANEGTNKHDVAVAGFQAA # GEAAAAVAVVGKEITKAFYGAPHNYSYYLGCSTGGRQGYKAMQDFPNDFDGIVAGAPGISWNSLMSWEDYIYSVLGNASSPTFISSEQWLGLVHNDIL # KQCDTIDGVVDGIIEDPSLCDYKPEGLICSPSGNVSDCLTAEQAQALRLVFSPLYNANGKLMYPRQQPGSENADYVGEMYGGELIQFSAVSTSIIHIW # FPELGVTDDDFVVGLVPLCCL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g411 ### # start gene g412 Scaffold_2 AUGUSTUS gene 1938328 1938884 0.42 + . g412 Scaffold_2 AUGUSTUS transcript 1938328 1938884 0.42 + . g412.t1 Scaffold_2 AUGUSTUS start_codon 1938328 1938330 . + 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_2 AUGUSTUS CDS 1938328 1938331 0.42 + 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_2 AUGUSTUS CDS 1938418 1938884 0.97 + 2 transcript_id "g412.t1"; gene_id "g412"; Scaffold_2 AUGUSTUS stop_codon 1938882 1938884 . + 0 transcript_id "g412.t1"; gene_id "g412"; # protein sequence = [MEPVKRETKKEKKEKKDREKAEKKRAIEEAAVRLGYDPSSKEGRKAGAAATGHTITTSSKHGPSKRQTAAAAASSAHT # LDDADNENYDDLDSEAEVDDLAGAVRQARILGVIAQPLAVPVDAGSWFVERRERFRLAYHMIGVALNPTKMSSRRTFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g412 ### # start gene g413 Scaffold_2 AUGUSTUS gene 1944961 1946684 0.22 - . g413 Scaffold_2 AUGUSTUS transcript 1944961 1946684 0.22 - . g413.t1 Scaffold_2 AUGUSTUS stop_codon 1944961 1944963 . - 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_2 AUGUSTUS CDS 1944961 1945692 0.47 - 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_2 AUGUSTUS CDS 1946373 1946684 0.23 - 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_2 AUGUSTUS start_codon 1946682 1946684 . - 0 transcript_id "g413.t1"; gene_id "g413"; # protein sequence = [MPVSQNKAQILYKTATKAKINKLCCPDLVAVWRIASHFIAAANRARKLAAMAKKTAENDWYEDQEHDDSNASLGGSNG # FESAEEDNEIEMPSRIQDLKDEIHHYSIGELKKTMFTHFCMMQKLRSRLHDPHSSPEFEELSNIYRNTFEETNARGSRGIDALSFDDYSIFATSVPQR # LSRNVCSQLQTWINASHFPGSAPVLVHNHAGVIQRGVTFSPRDHSKANARVVFQTTGTEEWSAGSIKSIFTVKWTSSGQGVVKTFAEINSYIPLTDSD # AVHDHFRAFGFAAGRLFYDRLGEDTFLIPLDRVASHFGYTPWTASCINCEVMHALPFSKASNFSTTECTPTMY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g413 ### # start gene g414 Scaffold_2 AUGUSTUS gene 1947283 1948353 0.24 - . g414 Scaffold_2 AUGUSTUS transcript 1947283 1948353 0.24 - . g414.t1 Scaffold_2 AUGUSTUS stop_codon 1947283 1947285 . - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_2 AUGUSTUS CDS 1947283 1948353 0.24 - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_2 AUGUSTUS start_codon 1948351 1948353 . - 0 transcript_id "g414.t1"; gene_id "g414"; # protein sequence = [MHNRKDLEHYLERPYTPSPPSEDNEVSDIWESNFLRNFHGPDRDTLFLCPDNPNENRLIFTLNEDGFNPYGNQISGKK # VSVGGIYMVCLNLPPSLRYKAENIFLAGIIPGPKEPSGHQINYLLRPLVDGLEQLWNEGIYIPRTRLHSRGRSLRAALIAIVCDMPAARLISGFAHYA # KDNDPCSMCTTSDRNDLDPNSLVPRTDAEHRKLAAAWLSADSEEERHALYQENGVRWSELLQLEYLDLVQNTVIDSMHGFYLRILQRHCRNIWGMDVD # LVDCDGLWEVELPNEEEQTTAMRVFWHGSKSEFRNLKAKSLRYLAIQEGLDYRRNRHSLFSALSQLVINIYIDLHCGVDPPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g414 ### # start gene g415 Scaffold_2 AUGUSTUS gene 1957696 1958862 0.88 + . g415 Scaffold_2 AUGUSTUS transcript 1957696 1958862 0.88 + . g415.t1 Scaffold_2 AUGUSTUS start_codon 1957696 1957698 . + 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_2 AUGUSTUS CDS 1957696 1958862 0.88 + 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_2 AUGUSTUS stop_codon 1958860 1958862 . + 0 transcript_id "g415.t1"; gene_id "g415"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g415 ### # start gene g416 Scaffold_2 AUGUSTUS gene 1958913 1962041 0.81 + . g416 Scaffold_2 AUGUSTUS transcript 1958913 1962041 0.81 + . g416.t1 Scaffold_2 AUGUSTUS start_codon 1958913 1958915 . + 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_2 AUGUSTUS CDS 1958913 1962041 0.81 + 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_2 AUGUSTUS stop_codon 1962039 1962041 . + 0 transcript_id "g416.t1"; gene_id "g416"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASERE # AQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARK # KIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRS # LLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g416 ### # start gene g417 Scaffold_2 AUGUSTUS gene 1968453 1968821 0.76 - . g417 Scaffold_2 AUGUSTUS transcript 1968453 1968821 0.76 - . g417.t1 Scaffold_2 AUGUSTUS stop_codon 1968453 1968455 . - 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_2 AUGUSTUS CDS 1968453 1968821 0.76 - 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_2 AUGUSTUS start_codon 1968819 1968821 . - 0 transcript_id "g417.t1"; gene_id "g417"; # protein sequence = [MARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPF # SGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKSFPPRRKEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g417 ### # start gene g418 Scaffold_2 AUGUSTUS gene 1979779 1981270 0.58 + . g418 Scaffold_2 AUGUSTUS transcript 1979779 1981270 0.58 + . g418.t1 Scaffold_2 AUGUSTUS start_codon 1979779 1979781 . + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_2 AUGUSTUS CDS 1979779 1980034 0.58 + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_2 AUGUSTUS CDS 1980090 1981270 0.96 + 2 transcript_id "g418.t1"; gene_id "g418"; Scaffold_2 AUGUSTUS stop_codon 1981268 1981270 . + 0 transcript_id "g418.t1"; gene_id "g418"; # protein sequence = [MITPDEVLCIALEHSAAAVEAASGLSAWDALSDADCAVRSSEITKAVILQIGEDDFNKLTPGQQAEVNFCVWCGCTMH # KDLNAHKGGIAKAITYWEVNHKMPPCSLPNKDNEAAACLGNDVEKAQVAKMTSRGGIKTCELMGLLLKHKDSKKGQQDRHGIYLEAREHVGFFAHFPD # TSNTWYQSYCDAAAEIIVHLPVYREMLEWIRDEKQTGHFTNIELNIYRALNDIPTLTELAAHALYGQAITYPYLQVARKQGMTHFSLAPLHLNLLDHI # QKLICQPKLLYSPDTDYATGSLDGQGWEHPEAVYCIMAMAGQLPDLEGVLLFLLEGAFETWKWFSHDVLHREIPAHLLKNLYPPATNDPNESTLGELR # QEKFRAPNATLEYSNSKLMLQRNKGTVDYLENNLSDGLNQTFLRKQQRKTERQGLKLKHRKDLALASQKKVANATIYTKKPQTFSSFSVWQTCDKCDK # CNHRGCDK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g418 ### # start gene g419 Scaffold_2 AUGUSTUS gene 1986342 1988757 0.17 + . g419 Scaffold_2 AUGUSTUS transcript 1986342 1988757 0.17 + . g419.t1 Scaffold_2 AUGUSTUS start_codon 1986342 1986344 . + 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_2 AUGUSTUS CDS 1986342 1986437 0.66 + 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_2 AUGUSTUS CDS 1986490 1986526 0.41 + 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_2 AUGUSTUS CDS 1987045 1987461 0.26 + 2 transcript_id "g419.t1"; gene_id "g419"; Scaffold_2 AUGUSTUS CDS 1988204 1988757 0.98 + 2 transcript_id "g419.t1"; gene_id "g419"; Scaffold_2 AUGUSTUS stop_codon 1988755 1988757 . + 0 transcript_id "g419.t1"; gene_id "g419"; # protein sequence = [MAVRTLQSEDEDSIDTDPMELYHLFEEAAPYLLYIHEFWMGRANFSSPRSTHSRDSDNELLSGFPSAVSAARASSSTK # VSVDRKVPKPKTTVKVVEDSKASQPTPTAMVYKRVRLPPRSRKVAPTPAKGKSRQVVVSEDDSASNEVESEDEEEDEDEDEDIAPPPKRLKTTSSISG # KIFFFIFHLANSLRRATDLNDQLKQLGSLFDTTRDLFLRSILDLQNAGEDPIVVLESLKTAEPNRRAITLNEWTLMATLFRWPSPFNLSGLDFDNRTP # GEWIELLRSIHSGESTVRVDENGRLVESSPPPDSATEAFEGLNEVEKGSADEGTSSQVGGSVPMELDLPMIESLAEQTLSPEKGAEPAQTLES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g419 ### # start gene g420 Scaffold_2 AUGUSTUS gene 1989835 1991285 0.34 + . g420 Scaffold_2 AUGUSTUS transcript 1989835 1991285 0.34 + . g420.t1 Scaffold_2 AUGUSTUS start_codon 1989835 1989837 . + 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_2 AUGUSTUS CDS 1989835 1990002 0.84 + 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_2 AUGUSTUS CDS 1990641 1991285 0.56 + 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_2 AUGUSTUS stop_codon 1991283 1991285 . + 0 transcript_id "g420.t1"; gene_id "g420"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLNRRSTPYPTIGSNKGSNKDEKS # VVNEVSPRLSKVHCHTDSHVSSNCMSCLAEDKGESIQFKSVSNGFLFHDLVTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFN # ANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSASDASFATAQSIPTTGSEDTVVTPTEITVPVLKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g420 ### # start gene g421 Scaffold_2 AUGUSTUS gene 1991597 1992653 0.31 - . g421 Scaffold_2 AUGUSTUS transcript 1991597 1992653 0.31 - . g421.t1 Scaffold_2 AUGUSTUS stop_codon 1991597 1991599 . - 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_2 AUGUSTUS CDS 1991597 1991957 0.54 - 1 transcript_id "g421.t1"; gene_id "g421"; Scaffold_2 AUGUSTUS CDS 1992019 1992653 0.31 - 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_2 AUGUSTUS start_codon 1992651 1992653 . - 0 transcript_id "g421.t1"; gene_id "g421"; # protein sequence = [MKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDICQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDI # VESTWLVNPPNRILTRDELMDIVLKLCRNITHSLRKHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKV # GAFRVLPHFTRNESIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g421 ### # start gene g422 Scaffold_2 AUGUSTUS gene 1992824 1993291 0.35 - . g422 Scaffold_2 AUGUSTUS transcript 1992824 1993291 0.35 - . g422.t1 Scaffold_2 AUGUSTUS stop_codon 1992824 1992826 . - 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_2 AUGUSTUS CDS 1992824 1993291 0.35 - 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_2 AUGUSTUS start_codon 1993289 1993291 . - 0 transcript_id "g422.t1"; gene_id "g422"; # protein sequence = [MGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDVELDVQEALDEERSYEIRRNHMLESKNATCEVFSRNLFPTFDE # EFVQNNPYPEAHRSSEGNRLDELIPLIGKYLSNPSDESLGEMSKDERIKFIRLIKKFQVTTKEGCTIEILINLINHN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g422 ### # start gene g423 Scaffold_2 AUGUSTUS gene 1993649 1994008 0.77 - . g423 Scaffold_2 AUGUSTUS transcript 1993649 1994008 0.77 - . g423.t1 Scaffold_2 AUGUSTUS stop_codon 1993649 1993651 . - 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_2 AUGUSTUS CDS 1993649 1994008 0.77 - 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_2 AUGUSTUS start_codon 1994006 1994008 . - 0 transcript_id "g423.t1"; gene_id "g423"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFSITLDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g423 ### # start gene g424 Scaffold_2 AUGUSTUS gene 1995011 1997317 0.29 - . g424 Scaffold_2 AUGUSTUS transcript 1995011 1997317 0.29 - . g424.t1 Scaffold_2 AUGUSTUS stop_codon 1995011 1995013 . - 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_2 AUGUSTUS CDS 1995011 1995479 1 - 1 transcript_id "g424.t1"; gene_id "g424"; Scaffold_2 AUGUSTUS CDS 1995572 1995812 0.39 - 2 transcript_id "g424.t1"; gene_id "g424"; Scaffold_2 AUGUSTUS CDS 1995887 1996543 0.57 - 2 transcript_id "g424.t1"; gene_id "g424"; Scaffold_2 AUGUSTUS CDS 1996594 1997317 0.89 - 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_2 AUGUSTUS start_codon 1997315 1997317 . - 0 transcript_id "g424.t1"; gene_id "g424"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQRILQKDIVESFLRDLSIDDERRNIAIVANQSVAYE # DHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNK # APFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDNEKSTGENDSKGNFHSSMNGYKRCEQET # FSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPIKSLGENCDKSESTETTQNQCNNENTSETI # RDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNK # QVDNEAIGVEKPINLNTEEVFTKYKPVEKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g424 ### # start gene g425 Scaffold_2 AUGUSTUS gene 1997347 1997967 0.45 - . g425 Scaffold_2 AUGUSTUS transcript 1997347 1997967 0.45 - . g425.t1 Scaffold_2 AUGUSTUS stop_codon 1997347 1997349 . - 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_2 AUGUSTUS CDS 1997347 1997967 0.45 - 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_2 AUGUSTUS start_codon 1997965 1997967 . - 0 transcript_id "g425.t1"; gene_id "g425"; # protein sequence = [MEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLC # KSTDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRI # EELSDRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g425 ### # start gene g426 Scaffold_2 AUGUSTUS gene 1998009 1998851 0.93 - . g426 Scaffold_2 AUGUSTUS transcript 1998009 1998851 0.93 - . g426.t1 Scaffold_2 AUGUSTUS stop_codon 1998009 1998011 . - 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_2 AUGUSTUS CDS 1998009 1998851 0.93 - 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_2 AUGUSTUS start_codon 1998849 1998851 . - 0 transcript_id "g426.t1"; gene_id "g426"; # protein sequence = [MPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVF # DSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVV # KDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLE # SLIQGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g426 ### # start gene g427 Scaffold_2 AUGUSTUS gene 2012661 2015746 0.19 + . g427 Scaffold_2 AUGUSTUS transcript 2012661 2015746 0.19 + . g427.t1 Scaffold_2 AUGUSTUS start_codon 2012661 2012663 . + 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_2 AUGUSTUS CDS 2012661 2013811 0.29 + 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_2 AUGUSTUS CDS 2014119 2014519 0.39 + 1 transcript_id "g427.t1"; gene_id "g427"; Scaffold_2 AUGUSTUS CDS 2014878 2015746 0.84 + 2 transcript_id "g427.t1"; gene_id "g427"; Scaffold_2 AUGUSTUS stop_codon 2015744 2015746 . + 0 transcript_id "g427.t1"; gene_id "g427"; # protein sequence = [MRKSLDLEYTAKPMSILSAFQRDSLHWDDLRRSKILTTSRSSLCRLVGVYPSRGIHLVPIDEMSLLLLIKKVDAGEKI # IPGTWVRLKRGKYAGDLAQVVDVTENGDEVGVRFVPRIDLNPREDERGLGRKRKKGNDPTSNNNPSARPPQRLFNYEEVLKVYGRTAVSKRGQVYVFF # QDTYKDGFIEKDVKLNSIILEDVNPTLDEITMFNSNNPLEESLVDLSIIAEASRKAALAVLQPGDHIEVFQGEQSGVHGIVQEIQGETLTITALGLDL # EGQKIDLPARSVRKRFKPGDHVKVMQGKNAGETGLVVAVSDTGSTPSTSNVNANLENGEKRRENTVVTFISDMTMQEVSVFSKDLREAAEVGNTTNIV # GEYELHDLVQLEDVAEHGGVFVTRARSLVSVSPKGVITPGGASSKKPTSDLTKMNPLSAGGASGGGGFVGSTIGRGPRDRLIGAHVVVIKGPHKGYVG # IVKDTNGVGLSGVARVELNTGNKVISIEKGKLHRKLPDGRTEPVEGPGGATPGRNAWGGKDSWGSPIPADSGSGIGGWGAEIPASTWAAQNAPTPAFA # STPGFAPTPAIPSTPGGNLSSTNTPYSSINPQYSQYSNNSNTYASYGAYAAPTPGMLPTAIGRRANEGPGEYTPPPDWLLAQHLTPHLTSLRVNISGT # KLPHQPYLDGLYESLDAHILAASRVADNYEQTALVKVDLEKSSAVTPAQLAALSSTPADRSIPTKFLLPVPPSSQDDTAIVLTGPRQGDKVKLRQRPD # SGSPTELVVVESVDAGGNASGTNGTEGGAFWECQKDWMCVCW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g427 ### # start gene g428 Scaffold_2 AUGUSTUS gene 2027618 2028112 0.41 - . g428 Scaffold_2 AUGUSTUS transcript 2027618 2028112 0.41 - . g428.t1 Scaffold_2 AUGUSTUS stop_codon 2027618 2027620 . - 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_2 AUGUSTUS CDS 2027618 2027646 0.41 - 2 transcript_id "g428.t1"; gene_id "g428"; Scaffold_2 AUGUSTUS CDS 2027788 2028112 0.44 - 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_2 AUGUSTUS start_codon 2028110 2028112 . - 0 transcript_id "g428.t1"; gene_id "g428"; # protein sequence = [MLVSDKGKLEERILVPYDKVFINGNGTFIEGLVTKVNAGDNSNSGTLALSDGRVIEYDVLVLATGSKWDGPISFPDDS # ASVKAHIAARREEIAKANDILLVGGGAVGIVAHAHLLSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g428 ### # start gene g429 Scaffold_2 AUGUSTUS gene 2029025 2029927 0.48 - . g429 Scaffold_2 AUGUSTUS transcript 2029025 2029927 0.48 - . g429.t1 Scaffold_2 AUGUSTUS stop_codon 2029025 2029027 . - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_2 AUGUSTUS CDS 2029025 2029927 0.48 - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_2 AUGUSTUS start_codon 2029925 2029927 . - 0 transcript_id "g429.t1"; gene_id "g429"; # protein sequence = [MTWLEEMKRSGVVPDVHEHLVPSKPQPIGKSEEINPKGKHKDTNNEMPIADITNRKLNHYIQTCCSFLCLGIDSQSQT # QLIELPPHPRPPEQERNSRPSILAVPSLSQLNLAENSTFGKPTMLLPILRPPVHDDLANSSITDPEEKEISVPTSLTSVDGPPRVHASHSESDLNALT # SAELHPDIIMVVNSSSEEQMNVPSSNTPSPIKPAAKQVGKGNGRAFTRTKSISKSPSKYYPPAQPIDAEATKALHESLTSLLGKRRSEESVDGSRDGV # RKRGDRADGKRPRPMRTKVRAVRMSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g429 ### # start gene g430 Scaffold_2 AUGUSTUS gene 2029968 2031088 0.67 - . g430 Scaffold_2 AUGUSTUS transcript 2029968 2031088 0.67 - . g430.t1 Scaffold_2 AUGUSTUS stop_codon 2029968 2029970 . - 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_2 AUGUSTUS CDS 2029968 2030037 0.67 - 1 transcript_id "g430.t1"; gene_id "g430"; Scaffold_2 AUGUSTUS CDS 2030394 2031088 0.78 - 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_2 AUGUSTUS start_codon 2031086 2031088 . - 0 transcript_id "g430.t1"; gene_id "g430"; # protein sequence = [MPSSSSEQGQAPDKVKADAAQNTANNNKPSADEEETVQASVRKPVGFQRELWRSVLAPRGYTWNEEETMLIKSPTKPR # HPVPVEDQEEDSHPGRNNRSVLSSSSFRRANSFAQLPPKQPLRRLLSTRMVKDLSPVGETNGFEAADMEIDTPGAGPSITRDSAPLEDVLLRTHLPPP # PHTPSIFSGLRFTALGEGNCDSVRGAIRKAGGAFVENVDLEAEAYEVDIIIVRLVRSHPAVELFETCDPSPLPVSGRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g430 ### # start gene g431 Scaffold_2 AUGUSTUS gene 2035781 2036875 0.91 + . g431 Scaffold_2 AUGUSTUS transcript 2035781 2036875 0.91 + . g431.t1 Scaffold_2 AUGUSTUS start_codon 2035781 2035783 . + 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_2 AUGUSTUS CDS 2035781 2036875 0.91 + 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_2 AUGUSTUS stop_codon 2036873 2036875 . + 0 transcript_id "g431.t1"; gene_id "g431"; # protein sequence = [MLNDIFAGVNDGRLRSPFDVVGRFLEDSRATHFSTAFAELFQGMVLRNPDDLQDGETLSNSDGSRPIVSWPLDSHPNT # AGGVRVTLDSICQSLLISYSSTHTFTTLSQKGDQNRTGDMPPMEPINDPRQASGQTSSPSRRVSGTNGDAAESDDSMPSLNEVSDSDDDSLEWSDDNS # EYESNIPFTSSSATHPSPRAQEPRGRFPRAILVPRRGVIRPRYLQRGTIAAGGIVDPIPSTSTSSSAPRPPTSNNDLLPLQSVSRSENDGYEKEDEGD # THHSEEHQHEDEFHFDRTHATADLNTNVMPPLERINEGSYPQGVTASRFDPQPLYETLIPSDIAAGAGAPDAPEADDERHDMLSSASIYD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g431 ### # start gene g432 Scaffold_2 AUGUSTUS gene 2046046 2046543 0.83 - . g432 Scaffold_2 AUGUSTUS transcript 2046046 2046543 0.83 - . g432.t1 Scaffold_2 AUGUSTUS stop_codon 2046046 2046048 . - 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_2 AUGUSTUS CDS 2046046 2046543 0.83 - 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_2 AUGUSTUS start_codon 2046541 2046543 . - 0 transcript_id "g432.t1"; gene_id "g432"; # protein sequence = [MMNQLYDGIRTSNAEVVNKQDAKIDKLTDSVQHNSTVLDRVLEALDIQSVKNKGKQRQEEMDIDEEVRRQGESGTATN # AENKSDGNHVDAEDSGDSTQETPFSYSTKKKASARSGAVKHRPQQELKNKVRVYRYDLFSADMMSTLAGDHSSMVQRSDGGERPLQK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g432 ### # start gene g433 Scaffold_2 AUGUSTUS gene 2046704 2047231 0.91 - . g433 Scaffold_2 AUGUSTUS transcript 2046704 2047231 0.91 - . g433.t1 Scaffold_2 AUGUSTUS stop_codon 2046704 2046706 . - 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_2 AUGUSTUS CDS 2046704 2047231 0.91 - 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_2 AUGUSTUS start_codon 2047229 2047231 . - 0 transcript_id "g433.t1"; gene_id "g433"; # protein sequence = [MLLPVVSGNAEDTSDSESSAMDIQSMDENMEPGPSTASQDASQTPSQILTHAPSSSTSQEPQFTVQIPQSPFTVRVSQ # SASTIQWTTGQPPTPNPPARSPPTPNPSTPNPPTPNPPTPNPPTPNHPTLNPPQAPGNSDATMDDPDATPTAAQFGAVSLQVCNVTTECIGRSIKFC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g433 ### # start gene g434 Scaffold_2 AUGUSTUS gene 2052940 2053968 0.42 + . g434 Scaffold_2 AUGUSTUS transcript 2052940 2053968 0.42 + . g434.t1 Scaffold_2 AUGUSTUS start_codon 2052940 2052942 . + 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_2 AUGUSTUS CDS 2052940 2053000 0.42 + 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_2 AUGUSTUS CDS 2053700 2053968 0.66 + 2 transcript_id "g434.t1"; gene_id "g434"; Scaffold_2 AUGUSTUS stop_codon 2053966 2053968 . + 0 transcript_id "g434.t1"; gene_id "g434"; # protein sequence = [MHEEHTSFLTTRNMGYSSSPXTKKFPSTLSSRHKHQRYIDVREGFAAESMVDDIYKLKVIVDQRRYYVCGTYDQSSPN # NNESLITYGVKERFKAKSPYSSTLSMSQRGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g434 ### # start gene g435 Scaffold_2 AUGUSTUS gene 2055448 2057395 0.77 + . g435 Scaffold_2 AUGUSTUS transcript 2055448 2057395 0.77 + . g435.t1 Scaffold_2 AUGUSTUS start_codon 2055448 2055450 . + 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_2 AUGUSTUS CDS 2055448 2055755 0.83 + 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_2 AUGUSTUS CDS 2055973 2057395 0.9 + 1 transcript_id "g435.t1"; gene_id "g435"; Scaffold_2 AUGUSTUS stop_codon 2057393 2057395 . + 0 transcript_id "g435.t1"; gene_id "g435"; # protein sequence = [MRSRQAFIPLIACISFFVRMLYHLENKWVDLVALHTPPNEDDSFLGKRQKEYAELRRGAVPAKWEWQELLRRETSISS # DWLAYFDQIMDIPPVGTFVDVHNSGTEVSTHKPRLRYPRITGGSFPRHNEDIFTFIQRRETHRLKAIVSEAASERQSRLQREENARRDQPPGRKGARV # YYWDLVEGIRVRTAVGRSNYEDIWERYGPSQRRYDSVADEWEVCTDLDPDGGDLDSFGDDSDDDFFISTRSQSNAEVGHEVGPASSYAYVARLQPTKH # SPAVPITFSEAIEDVAHHRFGFLKRPIQDNREVVVLPRLWKKVLGLLGCGRPPVPDGPDDHIKLQIINLVMQLLEAVDLRHAPQEYDLAIRNGLMKPQ # IPFEVDVLTSYHGHHFLIQAQDATDNEPYLIALHSAATVLEIARRKWGPGTVDIIKCLIKEGLSFNTLVASYPPRICKVIPRRRPAVLGFRPASFLPN # SQDYRAYEAVRDEFLRSARGRAALLSGGIVARLAREIVNEDDVCDGPTVHALQEGEHALCVWEVGRGRAFWDDQLTNEEIDLICGAYEVATGMCLPFS # MPVSHSFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g435 ### # start gene g436 Scaffold_2 AUGUSTUS gene 2060959 2061720 0.87 + . g436 Scaffold_2 AUGUSTUS transcript 2060959 2061720 0.87 + . g436.t1 Scaffold_2 AUGUSTUS start_codon 2060959 2060961 . + 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_2 AUGUSTUS CDS 2060959 2061720 0.87 + 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_2 AUGUSTUS stop_codon 2061718 2061720 . + 0 transcript_id "g436.t1"; gene_id "g436"; # protein sequence = [MARRRRVNSVNSDLQPCRCQECLKQDPEGLLVPQSALTEHRHRERLRKALLSRADRLQTVSTSSGIVPEASGSDIAPE # SSSTPSENHLLCGSNHPDSNRPGIPGLNDEDTDGWLQCVVSEIRMRLGTLYDCETRLTFFKDPSPNIPFVVSDSENLLQVNSGEFALKTTVIANNRFL # DTEARFCSLLQSIQISPEQRLVGDADVEEELRDALVKLHRIKERQWVSQAYPDGRDGSTINNSMCTIPSSVAVTKST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g436 ### # start gene g437 Scaffold_2 AUGUSTUS gene 2061816 2063264 0.81 + . g437 Scaffold_2 AUGUSTUS transcript 2061816 2063264 0.81 + . g437.t1 Scaffold_2 AUGUSTUS start_codon 2061816 2061818 . + 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_2 AUGUSTUS CDS 2061816 2063264 0.81 + 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_2 AUGUSTUS stop_codon 2063262 2063264 . + 0 transcript_id "g437.t1"; gene_id "g437"; # protein sequence = [MRVNLALLRGIIGGFMRRSGIQSRVPSQIPKDIHTIVDQYDLNPTLHVAIACPKCYALSPFTDEALKNAENAHEAHLP # LPVCEERLHPDSPPCGTTLWHTRHSGKRLFMAPIRKQVFQDLKLWIGRILAVPGIEDAVAEHQQRPFSTRTDSEIDFVDSVVFREFRGVDGQPFITSQ # KEPAENPDLRLVMSLGFDGFNPFGQRETHAQIQSTALYMVILSLPEHLRYIDKSICFWSLSCPETQTTPRQSYLTGSSPATAGFLGRCVLHAYSTSSY # WSKGFVALLPIVCDTEAAIQISGFAAHNHTYFCRRCLLPISDIHNLNPETWIMRDPVKHRELAFEWKVASRARREAIYKAHGIRFTELMELPYWDPIL # FTVIDDMHFGYLGLFKTHLREIWGIDHEKNSGDGLHPDLSDKKRMKLSNASLRNFLNEIRGNETSIGAILLEEKKGVLWYLCFWLKLRTGLSSKQQMV # DQILQWVSLKSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g437 ### # start gene g438 Scaffold_2 AUGUSTUS gene 2083608 2085041 0.41 - . g438 Scaffold_2 AUGUSTUS transcript 2083608 2085041 0.41 - . g438.t1 Scaffold_2 AUGUSTUS stop_codon 2083608 2083610 . - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_2 AUGUSTUS CDS 2083608 2085041 0.41 - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_2 AUGUSTUS start_codon 2085039 2085041 . - 0 transcript_id "g438.t1"; gene_id "g438"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g438 ### # start gene g439 Scaffold_2 AUGUSTUS gene 2085092 2086258 0.9 - . g439 Scaffold_2 AUGUSTUS transcript 2085092 2086258 0.9 - . g439.t1 Scaffold_2 AUGUSTUS stop_codon 2085092 2085094 . - 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_2 AUGUSTUS CDS 2085092 2086258 0.9 - 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_2 AUGUSTUS start_codon 2086256 2086258 . - 0 transcript_id "g439.t1"; gene_id "g439"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g439 ### # start gene g440 Scaffold_2 AUGUSTUS gene 2100573 2101112 0.56 - . g440 Scaffold_2 AUGUSTUS transcript 2100573 2101112 0.56 - . g440.t1 Scaffold_2 AUGUSTUS stop_codon 2100573 2100575 . - 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_2 AUGUSTUS CDS 2100573 2101112 0.56 - 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_2 AUGUSTUS start_codon 2101110 2101112 . - 0 transcript_id "g440.t1"; gene_id "g440"; # protein sequence = [MGASIDITSYNVPADAKTLKGLPHKLVEMSPVVVPQGLDDESPYSEIIVPKYFPPGSIMLFETHLQDHDASLEEFVVS # NSQEVFGNLGLVELNVVLYRADGEERDATNGQFGVYDVPGLGRLTYCGLEGWMHPLRHIMRNNDLGHPLCEHLRKGTWSLDYVYDRLMHVSSSSHYTH # FDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g440 ### # start gene g441 Scaffold_2 AUGUSTUS gene 2102365 2103721 0.27 - . g441 Scaffold_2 AUGUSTUS transcript 2102365 2103721 0.27 - . g441.t1 Scaffold_2 AUGUSTUS stop_codon 2102365 2102367 . - 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_2 AUGUSTUS CDS 2102365 2102954 0.38 - 2 transcript_id "g441.t1"; gene_id "g441"; Scaffold_2 AUGUSTUS CDS 2103169 2103721 0.33 - 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_2 AUGUSTUS start_codon 2103719 2103721 . - 0 transcript_id "g441.t1"; gene_id "g441"; # protein sequence = [MNGVFKTNFPLDGGKFNRARFTERKYVDYSVFCAYILTNYISRLPSDFSKPIQIDLPISHAGAFVFWVEYDGELPSQR # IKGREGYFNVDPVLRIKGRSPILSSELSPLPPSSGAVLQKDTVNLPLDGLSILTVVSKWMGPMSEWKNHFAEAKDRGYTMLHYTPLQERGESDSPYSI # RDQLKYDPSFSPANSPHLTPALELDSAMIEFSSSLASRGLPSIVNTQQDVDALIGAFRAVMKDLNLWQYYVLDVAREKESIRAVLASKKASPWTGPSI # AGKSVVELAEVLRGSNVIIGLAELSSRFGVHSDANAASGFIQAAFVELSDPDALADAWVRVLDVINVPLYQEWEEDTKIAMDNIKNRLTYARLDENGP # KLGEITRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g441 ### # start gene g442 Scaffold_2 AUGUSTUS gene 2108120 2109487 0.96 - . g442 Scaffold_2 AUGUSTUS transcript 2108120 2109487 0.96 - . g442.t1 Scaffold_2 AUGUSTUS stop_codon 2108120 2108122 . - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_2 AUGUSTUS CDS 2108120 2109487 0.96 - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_2 AUGUSTUS start_codon 2109485 2109487 . - 0 transcript_id "g442.t1"; gene_id "g442"; # protein sequence = [MSRTFQWFAFTSITLCLWALGILSRSKVNGASNTQIFVDHEVRSRNPSIPARDANIPFNSDNKSFINEHSLTAILPVT # ENSLPNLRHILEPLVHPDTASVYLREILLVSQDRITSNLRSELFTIMSQMQFTRHIQCSIRSWKDTLSESTALIQAALTSSSEWILLLEQDGLVKLDK # SIGWTLLNPPMTALPLGPRGICLSHNVSCIPPSSDTALEASYLIPPFVMPSSLAMHAGEHATSWATFGAYVSSLKFKDAQVGGIVLPQPSQTTHDISW # CSSIEHTVTHDIYPRLDFKSLFDQWPSSSPTSGEVSDGSLSLDSSPIVFGILFLTRDDLNSFAPVACRLQQRGHTLQISLYDGNSSQAPPKLGFLEHS # MCILSYRALSADEPPAAWLDGLDGHPEVIVTLSEMTDPLNGCSSTSIIRLPREDLAHTQWMSSLTSHEWRGEYCAFLTQDVHH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g442 ### # start gene g443 Scaffold_2 AUGUSTUS gene 2118486 2119328 0.44 + . g443 Scaffold_2 AUGUSTUS transcript 2118486 2119328 0.44 + . g443.t1 Scaffold_2 AUGUSTUS start_codon 2118486 2118488 . + 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_2 AUGUSTUS CDS 2118486 2119328 0.44 + 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_2 AUGUSTUS stop_codon 2119326 2119328 . + 0 transcript_id "g443.t1"; gene_id "g443"; # protein sequence = [MPDSFFTSGKPRKRKRVETSPASAINGKKIRHTPNPKGKKAKSKQLDEDLDSDQTSGLGDDDDLRAPIDLEGEVEGDD # DPDETPAEKRLRLAHLYLDGVKEDLAANEGDFDAAEIDKELISSRLRGAQYKGRVHLFVADDFAEASSSHLKVKGHRFSCTAAVASPVISSSTTPGYY # LFTAGKEGHIMKWDLQNGKQVAAMYKVKPDKGKGKGKGRANATRTAGHTSSVTSLALTTDGTYLASGSMDSHVCVWDARSYRWIASFAHKDTISVRQI # FSLVIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g443 ### # start gene g444 Scaffold_2 AUGUSTUS gene 2119522 2120262 0.44 + . g444 Scaffold_2 AUGUSTUS transcript 2119522 2120262 0.44 + . g444.t1 Scaffold_2 AUGUSTUS start_codon 2119522 2119524 . + 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_2 AUGUSTUS CDS 2119522 2120262 0.44 + 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_2 AUGUSTUS stop_codon 2120260 2120262 . + 0 transcript_id "g444.t1"; gene_id "g444"; # protein sequence = [MGYIETLFGHQDQILALDCLPSLPTLPPISLASVIRRPPSTFTATDSSPVPASAAAKTLTYARHPLTTPAETLLTVGA # RDKTARFWKVPEETQLVFRGGGATSRGAQGQGIQTKRDKLRDVLEGKMDALAADDENSGDEDAKRGQKKGVQEHHRYIEGSLESVAMIDENTFLTGGD # SGSICLWSTSKKKPVFTCSVAHGAYNPLPEQVDEEEIEIPPHPRWITALASLRYSDLFASGKCPSFRQCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g444 ### # start gene g445 Scaffold_2 AUGUSTUS gene 2127705 2128624 0.42 + . g445 Scaffold_2 AUGUSTUS transcript 2127705 2128624 0.42 + . g445.t1 Scaffold_2 AUGUSTUS start_codon 2127705 2127707 . + 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_2 AUGUSTUS CDS 2127705 2127761 0.64 + 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_2 AUGUSTUS CDS 2127848 2128624 0.53 + 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_2 AUGUSTUS stop_codon 2128622 2128624 . + 0 transcript_id "g445.t1"; gene_id "g445"; # protein sequence = [MSFSAGVDLDWCLTCNRHLCEPTPSQQILNLSSNVHDWTQSEELDASGDDAVIFHIVHDTSSAKGIAAWAANIPTGAP # PSGPSTLPSYSVSPPKLLRPQYARPVPPTLSMSQTTSASIPLATPPQKDVSMLSSLANHIRSFVSSSSTGFPVNKLRARTKKRLPYTTAPVQRISSLS # SDSFAEDDYEFGPSFSTVNSPHEDTKDPWWTTESDCSSAASSMVLKKSAAQIIATSESRKYQLECEMCFQPKVLPIRVEPSSKDGLSDYGEFDLRGRQ # IWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g445 ### # start gene g446 Scaffold_2 AUGUSTUS gene 2156769 2157218 0.84 - . g446 Scaffold_2 AUGUSTUS transcript 2156769 2157218 0.84 - . g446.t1 Scaffold_2 AUGUSTUS stop_codon 2156769 2156771 . - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_2 AUGUSTUS CDS 2156769 2157218 0.84 - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_2 AUGUSTUS start_codon 2157216 2157218 . - 0 transcript_id "g446.t1"; gene_id "g446"; # protein sequence = [MLADRWLINLDEPSQSSPSDWSFDGDYTADDDEEMAYHREETANEDVNGGGTARRTLHDVFARRIAVGEEGLVLKAAD # SEYNEPKKPWVKLKKDYIEGLGDTVDLVLLGAACVPDRALELRGTRSAFTMSLNLTFSIFFFYFPQFLLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g446 ### # start gene g447 Scaffold_2 AUGUSTUS gene 2157976 2158290 0.48 - . g447 Scaffold_2 AUGUSTUS transcript 2157976 2158290 0.48 - . g447.t1 Scaffold_2 AUGUSTUS stop_codon 2157976 2157978 . - 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_2 AUGUSTUS CDS 2157976 2158290 0.48 - 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_2 AUGUSTUS start_codon 2158288 2158290 . - 0 transcript_id "g447.t1"; gene_id "g447"; # protein sequence = [MAPYEAAVLTQIILKDLRGLLYPQIERDPTAALKDYNTKAVKILTKENAMWAWDPSNSMNRSYRARWDLDVAAKAFES # GQAVGPRIGTQIGVCLPIKLALSHPF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g447 ### # start gene g448 Scaffold_2 AUGUSTUS gene 2159097 2160386 0.41 + . g448 Scaffold_2 AUGUSTUS transcript 2159097 2160386 0.41 + . g448.t1 Scaffold_2 AUGUSTUS start_codon 2159097 2159099 . + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_2 AUGUSTUS CDS 2159097 2159579 0.89 + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_2 AUGUSTUS CDS 2159684 2159717 0.41 + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_2 AUGUSTUS CDS 2159768 2159794 0.64 + 2 transcript_id "g448.t1"; gene_id "g448"; Scaffold_2 AUGUSTUS CDS 2160292 2160386 0.64 + 2 transcript_id "g448.t1"; gene_id "g448"; Scaffold_2 AUGUSTUS stop_codon 2160384 2160386 . + 0 transcript_id "g448.t1"; gene_id "g448"; # protein sequence = [MFSQTIIRSATRSFSSSSVISNRCIAYTQNGDPTQVLTAFTYPKLPSPPPSTVNLKFLLSPINPADVNTIEGVYPSKP # THTSNLAASGLGSKDEPVFVGGNEGLAQVVEVGEGVKGLKKDDWVVMDRPQLGTWSTSRNVPFNSVIKLPATGLTETHGATMTAGDWVIQNGANTTEY # LGRPAXKEELISKLAGMMKEGKVCVIDTTRSNMNSE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g448 ### # start gene g449 Scaffold_2 AUGUSTUS gene 2160822 2161953 0.71 + . g449 Scaffold_2 AUGUSTUS transcript 2160822 2161953 0.71 + . g449.t1 Scaffold_2 AUGUSTUS start_codon 2160822 2160824 . + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_2 AUGUSTUS CDS 2160822 2161371 1 + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_2 AUGUSTUS CDS 2161427 2161953 0.71 + 2 transcript_id "g449.t1"; gene_id "g449"; Scaffold_2 AUGUSTUS stop_codon 2161951 2161953 . + 0 transcript_id "g449.t1"; gene_id "g449"; # protein sequence = [MSSSEVKVPFFKKKGSRPTTSRKRSTSPSSSAAHSTLPSSSSSSKSEVVLPTKKTTSNLLSAGTKRKLTERDHDDLDA # PEKDGPDVKWTSAGSHMHAALDILAGDEAEELLAKRRKADAKDDEDEYGGPDDGLYKGQKSYKSHIKKSSEVPKAMRVGPQRNTSSTIRTVTIVDYQP # DVCKDYKETGYCGFGDTCKFLHDRGTCEFVPFFPTLTTNPNLPTPDLAGWQLDKLADAPRKQVGDEDSDDSDDDDEDIPFACLICRKPYTDPIVTKCG # HFFCSACAIKRFAKTPKCLACGTPTGGMFNRADKVIAKMRKKREEKGGGDEEEAGAGVEIEGLQKEVHKSDNGSDSDADDDDDD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g449 ### # start gene g450 Scaffold_2 AUGUSTUS gene 2162388 2162726 0.35 - . g450 Scaffold_2 AUGUSTUS transcript 2162388 2162726 0.35 - . g450.t1 Scaffold_2 AUGUSTUS stop_codon 2162388 2162390 . - 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_2 AUGUSTUS CDS 2162388 2162726 0.35 - 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_2 AUGUSTUS start_codon 2162724 2162726 . - 0 transcript_id "g450.t1"; gene_id "g450"; # protein sequence = [MCPTIVEKEDGEQCLDLNLHSLTPKFNIGSPYIAIGASGGPTIFPAVFQTLINIIDYGLDPSEAIEFGRLHNQLKPEG # TFADETYRADILEALSRQRHRIQGYYVVLNSILS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g450 ### # start gene g451 Scaffold_2 AUGUSTUS gene 2163645 2163944 0.34 - . g451 Scaffold_2 AUGUSTUS transcript 2163645 2163944 0.34 - . g451.t1 Scaffold_2 AUGUSTUS stop_codon 2163645 2163647 . - 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_2 AUGUSTUS CDS 2163645 2163944 0.34 - 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_2 AUGUSTUS start_codon 2163942 2163944 . - 0 transcript_id "g451.t1"; gene_id "g451"; # protein sequence = [MTVRIPPKNPGDKSKAYTIDFRGMAPRATTPTMFDNGKIALSASGGLAMLIPGELAGLQMAHDEWGAMTWKEVVVPNA # ELAMGWTVDKELARRIQVCSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g451 ### # start gene g452 Scaffold_2 AUGUSTUS gene 2167963 2168520 0.87 - . g452 Scaffold_2 AUGUSTUS transcript 2167963 2168520 0.87 - . g452.t1 Scaffold_2 AUGUSTUS stop_codon 2167963 2167965 . - 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_2 AUGUSTUS CDS 2167963 2168520 0.87 - 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_2 AUGUSTUS start_codon 2168518 2168520 . - 0 transcript_id "g452.t1"; gene_id "g452"; # protein sequence = [MNFYSGLDYCESSTLYKECQKYWSSFSPTVHRVPHVCAMASATYSDEKYLHQLKVDIYNINDNAIPPPLSVAARPNNA # QKKTFLKLLTVIGLAVACTIAFIHGFTKGSMPPMEDGFYPNVVLKEPGEFTTMERNPAYLVEAQNGVVATENKRCSDMGVIALRKGGSAVDAAITATL # CIGVVNSFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g452 ### # start gene g453 Scaffold_2 AUGUSTUS gene 2171838 2172525 0.76 + . g453 Scaffold_2 AUGUSTUS transcript 2171838 2172525 0.76 + . g453.t1 Scaffold_2 AUGUSTUS start_codon 2171838 2171840 . + 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_2 AUGUSTUS CDS 2171838 2171840 0.96 + 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_2 AUGUSTUS CDS 2171891 2171921 0.97 + 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_2 AUGUSTUS CDS 2172035 2172525 0.78 + 2 transcript_id "g453.t1"; gene_id "g453"; Scaffold_2 AUGUSTUS stop_codon 2172523 2172525 . + 0 transcript_id "g453.t1"; gene_id "g453"; # protein sequence = [MSMRLPPLSSMAQTLGVGSSTVNPASVPLPDDDEDDFPPPSKILSEIARAATKVGGARHSVSKGKGKAKATPDVDDDD # TTSRKRKRGSQKGRTSGSSNYTDEDLGILFEILRRNLPLGQRAWSRCADEFNEQAEQQGRPTRLAKSLELKYKQVMPCFFLSINVNIDTPTAGKDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g453 ### # start gene g454 Scaffold_2 AUGUSTUS gene 2174197 2175066 0.62 - . g454 Scaffold_2 AUGUSTUS transcript 2174197 2175066 0.62 - . g454.t1 Scaffold_2 AUGUSTUS stop_codon 2174197 2174199 . - 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_2 AUGUSTUS CDS 2174197 2175066 0.62 - 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_2 AUGUSTUS start_codon 2175064 2175066 . - 0 transcript_id "g454.t1"; gene_id "g454"; # protein sequence = [MDDDDDIEALICMLMQDEQASYQAEEDIRHIATLGSAYIYYGALESRRLRAERRALTRLYLTRPQLIPDPRGMTPWQV # LYRSHSDRAFITTMGFNVASFNKLLESGFEEQWISQVIPRRDVACSSTPRVYRRSLDAAGALGLVLHYLNSTILETSLMEIFALIPTTVSRYISFALE # ILRNLLRSMPNASIRWPKDHEFIQNETLILARHPLLVGAFGSLDGLKLPVQTSSDDDVENETYNGWLHEHFISNVIAFSPTGMVSGYVQNEIKLDICS # RRNHWLSSECARKLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g454 ### # start gene g455 Scaffold_2 AUGUSTUS gene 2177101 2177850 1 + . g455 Scaffold_2 AUGUSTUS transcript 2177101 2177850 1 + . g455.t1 Scaffold_2 AUGUSTUS start_codon 2177101 2177103 . + 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_2 AUGUSTUS CDS 2177101 2177850 1 + 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_2 AUGUSTUS stop_codon 2177848 2177850 . + 0 transcript_id "g455.t1"; gene_id "g455"; # protein sequence = [MSTRSSSCGYSTAVPVPTPSKASATAPSRGSSDRTDSSDSIAETKQKTVKVKGTSSVDVDRSASTGRLKTMRNSYRVL # KNLTPKQMDDFMNSYVIYGLDWENEAQMITTLGPDYPTAVHDCLVSYYSVLNHLCALGEVEKMYIPPVMNTHAGILDNQLLYEEFVAREIELKSGDHV # LDLGCGRGRVAAHMSKYTGAHVTGLNLDADQLASARTFAAKRKLPLEFIQQDFNVLPSSSKPRALTRFIKYRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g455 ### # start gene g456 Scaffold_2 AUGUSTUS gene 2179622 2179942 1 - . g456 Scaffold_2 AUGUSTUS transcript 2179622 2179942 1 - . g456.t1 Scaffold_2 AUGUSTUS stop_codon 2179622 2179624 . - 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_2 AUGUSTUS CDS 2179622 2179942 1 - 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_2 AUGUSTUS start_codon 2179940 2179942 . - 0 transcript_id "g456.t1"; gene_id "g456"; # protein sequence = [MRYIAAYLLLQLGGNTSPSAADIKKVLSAVGIESEEERLDKLLSELSGKDINTLISEGSSKLSSVPSGGGAAAASAAP # AAGGAAPAAEKEEEKKEEEKVPFISPIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g456 ### # start gene g457 Scaffold_2 AUGUSTUS gene 2184288 2185536 0.39 - . g457 Scaffold_2 AUGUSTUS transcript 2184288 2185536 0.39 - . g457.t1 Scaffold_2 AUGUSTUS stop_codon 2184288 2184290 . - 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_2 AUGUSTUS CDS 2184288 2184747 0.7 - 1 transcript_id "g457.t1"; gene_id "g457"; Scaffold_2 AUGUSTUS CDS 2184845 2185536 0.4 - 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_2 AUGUSTUS start_codon 2185534 2185536 . - 0 transcript_id "g457.t1"; gene_id "g457"; # protein sequence = [MKGIRESVQQGVGRFLGAVAGTNDPSYTTSHRRSLTHTPSQSSSSASTYATSSTRFSQSSQSSFGDIVPTSISEEDGD # LMSDSNIDVTSMKRARKHRPTHIGIVSDTGATPLVSPTRDFALESPPRTATPSTRAVHGGGNMRSRRKSRTFSSESPTEVTGTSASEETNRCADSDTN # TSESLSSSLVDWGMGLSSPPPVDSPVPGQGSGKRNVNKRMSLPARALSSGSGADSISKNQKRASILLSDVSQSISQSIPQSIIQALVSPPLSASSELA # PPSGYHNGIKKQTSPASTSSASLLDEDIPFEESGGSLTSLLEPSPAPFPVLSPTKLAPSSSEPQPKSPMKNKFSSSPAGVTKAGKTNTTGSKFISAVA # SQEDDDDDWNW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g457 ### # start gene g458 Scaffold_2 AUGUSTUS gene 2189445 2189819 0.78 - . g458 Scaffold_2 AUGUSTUS transcript 2189445 2189819 0.78 - . g458.t1 Scaffold_2 AUGUSTUS stop_codon 2189445 2189447 . - 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_2 AUGUSTUS CDS 2189445 2189819 0.78 - 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_2 AUGUSTUS start_codon 2189817 2189819 . - 0 transcript_id "g458.t1"; gene_id "g458"; # protein sequence = [MSFPRSFNYWERKSVWVSTLRMVTRRLQSTSFVLANINELQEKIEELTTRAKALEDALAKSHNLVSPQPHPLLSDDLL # QITRTVKEESPEPNLSTDSTTVKKEENNKQEEDEALIVYKSSLGSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g458 ### # start gene g459 Scaffold_2 AUGUSTUS gene 2194519 2195514 0.87 - . g459 Scaffold_2 AUGUSTUS transcript 2194519 2195514 0.87 - . g459.t1 Scaffold_2 AUGUSTUS stop_codon 2194519 2194521 . - 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_2 AUGUSTUS CDS 2194519 2194965 0.98 - 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_2 AUGUSTUS CDS 2195059 2195084 0.89 - 2 transcript_id "g459.t1"; gene_id "g459"; Scaffold_2 AUGUSTUS CDS 2195211 2195514 0.92 - 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_2 AUGUSTUS start_codon 2195512 2195514 . - 0 transcript_id "g459.t1"; gene_id "g459"; # protein sequence = [MSRRGRKKKNPSHPPQHEQEVDNTPPLDVPSSRQPTTKFTSLLATKLVAATRTERPFAAKYGEVQSTWQRVADLVSNE # ARLNPPMSKKTAQDKVNQMVKMHHGLCHEMDENLAAQEAAGKKAREAAMKTLEQTELGRKRRWNEAFLAALSDSDEPEDNESSYDTEAIETTQSHKRH # LATKATGNPAYNAASGPIKDVFGELASVVNRAEADAMESTVRLAEENNSIQRERLEVEKQMLTAIQGLSSTLFHSHHFIRQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g459 ### # start gene g460 Scaffold_2 AUGUSTUS gene 2200706 2201446 0.58 - . g460 Scaffold_2 AUGUSTUS transcript 2200706 2201446 0.58 - . g460.t1 Scaffold_2 AUGUSTUS stop_codon 2200706 2200708 . - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_2 AUGUSTUS CDS 2200706 2201446 0.58 - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_2 AUGUSTUS start_codon 2201444 2201446 . - 0 transcript_id "g460.t1"; gene_id "g460"; # protein sequence = [MAIFLVRSLRLQSSFDTSFDCERPSFDRWYSKLPATPSRALNRGIPNMHSPSAIRTLIVDNESEFEEDESDEGKVNPW # VNQSASNSLTSTTELLEGHECPPNCYLCSISAVIYKIEYPELYEECDNLDDEDDFEDCTASAPTTHCVPECISCARERLRAEGYKFPAYQYDHSDHIP # DDDEAKVEEKIKPWGQRIPREEVDPQINIVFTTPPPDSQKAESTTLPVKLNEIFPRVFFPPPKPSSSTCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g460 ### # start gene g461 Scaffold_2 AUGUSTUS gene 2202564 2203574 0.48 + . g461 Scaffold_2 AUGUSTUS transcript 2202564 2203574 0.48 + . g461.t1 Scaffold_2 AUGUSTUS start_codon 2202564 2202566 . + 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_2 AUGUSTUS CDS 2202564 2202768 0.49 + 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_2 AUGUSTUS CDS 2202880 2203574 0.61 + 2 transcript_id "g461.t1"; gene_id "g461"; Scaffold_2 AUGUSTUS stop_codon 2203572 2203574 . + 0 transcript_id "g461.t1"; gene_id "g461"; # protein sequence = [MSRDSSGSFTSSNSAALYQSSNQSLNPPTSTSSAPSPSSSSHSYPDATSAPPLPPLQVVPALPPDRPKHSSGRTVPAP # RAAVIGPGNIPPNAGTGSNVQHPIERTQHMGAQDANPSIGSRSFRPQHSLYGHAGPPYYLPPPSLPPLLPHPQQTQPPSSSHEHSYSTQSSSSNLYAI # SSVPRHEWDGNESSSILSHPEYLSRKRQRQDSTDFASPVSLDTNWARENEYQQTVDLPGHRSTTFETTPLGGYATRPSIVLEPALTRELTNRAYFLTM # FYSVHSLLFSLSSKFHFVFPYPLSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g461 ### # start gene g462 Scaffold_2 AUGUSTUS gene 2205533 2205820 0.59 + . g462 Scaffold_2 AUGUSTUS transcript 2205533 2205820 0.59 + . g462.t1 Scaffold_2 AUGUSTUS start_codon 2205533 2205535 . + 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_2 AUGUSTUS CDS 2205533 2205820 0.59 + 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_2 AUGUSTUS stop_codon 2205818 2205820 . + 0 transcript_id "g462.t1"; gene_id "g462"; # protein sequence = [MGLGMGRRAVHGESWPHREDSTTMKAVDYTGSMASNGGARIGINQVDSEPNWWKVKHRKDRPGETDLDWGVRRLDSVL # ETLGERAAYSAASEYHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g462 ### # start gene g463 Scaffold_2 AUGUSTUS gene 2207210 2208210 0.57 + . g463 Scaffold_2 AUGUSTUS transcript 2207210 2208210 0.57 + . g463.t1 Scaffold_2 AUGUSTUS start_codon 2207210 2207212 . + 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_2 AUGUSTUS CDS 2207210 2207535 0.57 + 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_2 AUGUSTUS CDS 2207613 2208210 0.9 + 1 transcript_id "g463.t1"; gene_id "g463"; Scaffold_2 AUGUSTUS stop_codon 2208208 2208210 . + 0 transcript_id "g463.t1"; gene_id "g463"; # protein sequence = [MYPSFLTVAKQLQAFFLVTDDLMDSSITRRGQPCWYRVPKIGLVAVNDAFMLEGAIYHLLKRHFKKEPYYVDLLELFH # EISYQTEIGQLIDLITAPEDAVDLSKFSLQKHSMIVVYKTAFYSFYLPVALAMLFCCVPTLYTPPNSASAVAPYEVAKSILIPLGEYFQIQDDFLDFA # GVPAQIGKVGTDIIDNKCSWCINTALSLATPDQRKILNENYGVKPTREETEFAKKIAEGKNGEEQGYLGEAERRVKAVFEEIGLREIYAEYEKNAYKK # LTGMIDQIDEGTSVGLKKEVFKSFLDKIHHRQK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g463 ### # start gene g464 Scaffold_2 AUGUSTUS gene 2211423 2211674 0.84 + . g464 Scaffold_2 AUGUSTUS transcript 2211423 2211674 0.84 + . g464.t1 Scaffold_2 AUGUSTUS start_codon 2211423 2211425 . + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_2 AUGUSTUS CDS 2211423 2211674 0.84 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_2 AUGUSTUS stop_codon 2211672 2211674 . + 0 transcript_id "g464.t1"; gene_id "g464"; # protein sequence = [MTVEEALEHPYVAAYHDADDEPAANSLSPDYFQFDREPSDIIYTNPLLTLSAVEKEQLSKDDLKKLLYDEVMSFQPVI # GNTSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g464 ### # start gene g465 Scaffold_2 AUGUSTUS gene 2213323 2214546 0.91 - . g465 Scaffold_2 AUGUSTUS transcript 2213323 2214546 0.91 - . g465.t1 Scaffold_2 AUGUSTUS stop_codon 2213323 2213325 . - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_2 AUGUSTUS CDS 2213323 2214546 0.91 - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_2 AUGUSTUS start_codon 2214544 2214546 . - 0 transcript_id "g465.t1"; gene_id "g465"; # protein sequence = [MVQEEPDTIFLAAQRGDLSLLQALFAQGAQATDRDSQNITALHWASINAHLHICRELLERGAEVDARGGDLDATPMQW # AARNGYLYVVKLLLERGADPTLKDGQGYNALHLITHSSAVMPLLYLLQQRKVDVDSVDLQGHTSLMWAAYQGDAVSVDVLLKHGADVTTKDEGGLTPL # HWAVVRGNKAVIKKLLESGADVSAKDSGGRTPRDMAIELKSIGPWKRAMEEGGWDEYGVPRAPVFSNPKYNSIAIFILPTPLLILVFNTIAVSWLPWF # TSLILAAAECFAAGHILTRVLLGRKPQAESPFFAGIIFASLLIVVSCWATTLTNVHDHPTAHLIFIVSASLCLYNFWRAVCLDPGFVPNRLLDSVETL # ASEGRLNGQTFCVSCMVCSGILFALLTLILTRYLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g465 ### # start gene g466 Scaffold_2 AUGUSTUS gene 2222842 2223486 0.36 - . g466 Scaffold_2 AUGUSTUS transcript 2222842 2223486 0.36 - . g466.t1 Scaffold_2 AUGUSTUS stop_codon 2222842 2222844 . - 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_2 AUGUSTUS CDS 2222842 2223486 0.36 - 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_2 AUGUSTUS start_codon 2223484 2223486 . - 0 transcript_id "g466.t1"; gene_id "g466"; # protein sequence = [MFTPTTNKGTALSSIQEETTNKLTIGHGKAIYYKYSQVHEPRQISFVTDIARLDRVWDDEQPNWDPLDCGRNLLAING # TPIALKYWKQVFSRKNDGAWSWLKRLWVEWKVRTICMTRLSLTGILQYVAERYYSSGSDQFWQEFSYSNGDHYHWKAITDRLRDLRSERDQQLVDQAK # AEYGDNFAKIFVNNRGKVLTDKPTIARHYLNELAKHSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g466 ### # start gene g467 Scaffold_2 AUGUSTUS gene 2229494 2229988 0.62 + . g467 Scaffold_2 AUGUSTUS transcript 2229494 2229988 0.62 + . g467.t1 Scaffold_2 AUGUSTUS start_codon 2229494 2229496 . + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_2 AUGUSTUS CDS 2229494 2229988 0.62 + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_2 AUGUSTUS stop_codon 2229986 2229988 . + 0 transcript_id "g467.t1"; gene_id "g467"; # protein sequence = [MNNSGIPPLRPLPNPMSPNGPPLHIAVDDSFRSQRPSPTSPYSAPSSSSVKLPESTSNQITRASTTGSADQDSTVPTG # SYGMPLVRSEDLNHGMPSPRPQPAYISNSGSTSRSSTPAFNNSPNPSSESSKRRSTASLSSTSSGSSLSGKPPPTTASTSNSLASA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g467 ### # start gene g468 Scaffold_2 AUGUSTUS gene 2231105 2232139 0.12 + . g468 Scaffold_2 AUGUSTUS transcript 2231105 2232139 0.12 + . g468.t1 Scaffold_2 AUGUSTUS start_codon 2231105 2231107 . + 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_2 AUGUSTUS CDS 2231105 2232139 0.12 + 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_2 AUGUSTUS stop_codon 2232137 2232139 . + 0 transcript_id "g468.t1"; gene_id "g468"; # protein sequence = [MSHVREARMLCRKTVELFTLLSHTQESGSRRMGMTQDLLALVTGLAHYLKILIRIALTGALKLEREAPGHAGNTNGVI # LRQGEAMAGFLDKLHLLAVQGGNPSARRMIKGHNGEVVINGNGNIGTQGVTYGFRSLAPENAGESPFSSSGASGADGSGQLSSSHPPSDLCVKCGSTV # EEDCVRLGTYQRWHSKCVGCKVCGKVAEVQLPPAISKDQEREASADGGSSAQAPKLTTARRPPANVGLFVYDLDSMRDTASFGSIPTVILCTDHAHTA # CRGGFKAVQRLEQYAFLLNVALRRLYLLLRKQGVVPLSPGESFVLDCMRTFYPYRTHSSDTYFTRPILRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g468 ### # start gene g469 Scaffold_2 AUGUSTUS gene 2232171 2234184 0.13 + . g469 Scaffold_2 AUGUSTUS transcript 2232171 2234184 0.13 + . g469.t1 Scaffold_2 AUGUSTUS start_codon 2232171 2232173 . + 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_2 AUGUSTUS CDS 2232171 2233332 0.13 + 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_2 AUGUSTUS CDS 2233385 2234184 0.16 + 2 transcript_id "g469.t1"; gene_id "g469"; Scaffold_2 AUGUSTUS stop_codon 2234182 2234184 . + 0 transcript_id "g469.t1"; gene_id "g469"; # protein sequence = [MKQVHLDRKLSATARLPKKSTIVESPAGRSVHPSNVLQSQKSQEATQPHQPHHHHPNHHHEGHQALPGQQNKSPSIPP # PLTPGYIQQQSGRPNPHLDTHDGQSHLIRPAFARNNTEVKIIDDSQPSSPAVGPEEQEEMLNISPAEDSITLADIGPLIEAAQAREQQRSLPTEFHSL # YSGAQCSGTGNRQVLSCPSTHEVPLKDQIDIEELLEMVEAKKPNRWKAFLGMGDKKNQKKKPGSQFPRSTITFQVSYFYVVSGTFGVLLEVLVAQEGV # DSLLGASRATLKVPSFVDDVISAMRQMGQSLLSHRMFINQVSNVDMSVEGIFRKNGNIRRLGQLTEAIDRDPLSVDLSQDNAVQLAALLKKFLRELPE # PLMTFKLYKLWVSAQALKNDDERKRLLHMISIIMPKAHRDTMEILFVFLKWVASFAHMDEVTGSKMDLGNLATVICPSILYPRHGTVRDESFRAIDVV # TSLLENQDEFFSVPEEFLPILHDQEYFVNSLELNGKDFMKKCDTYQKVKAGNGRLPTPGPYNGPNGNTPRIGAGPAPGTSPVVPERPPPPLAAQRPYG # VTQPIPSYPSSSSQHGHIGNINSPRTPQAEEWSSPRPINPNGPSTPSRPSSYIQPRASGEYFANLNPNNYTPNPNGYPPARQRTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g469 ### # start gene g470 Scaffold_2 AUGUSTUS gene 2236380 2236889 0.48 + . g470 Scaffold_2 AUGUSTUS transcript 2236380 2236889 0.48 + . g470.t1 Scaffold_2 AUGUSTUS start_codon 2236380 2236382 . + 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_2 AUGUSTUS CDS 2236380 2236889 0.48 + 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_2 AUGUSTUS stop_codon 2236887 2236889 . + 0 transcript_id "g470.t1"; gene_id "g470"; # protein sequence = [MDDLTLLVRKLWTIRQRDYPNVPQGFVSCSASGHGLPDYAVGYELRGPRTIFEQYKERTYHLAYDITAWDNGELRRQE # PQKAALVTNDEIVWVHCDLRSTNIMIHNGRVSGVIDWENSGWQPRHWQLLVVRPWCGTNGPRIANAWKQIPFDDDVEQAYEAGLSLLNEFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g470 ### # start gene g471 Scaffold_2 AUGUSTUS gene 2242676 2243359 0.99 + . g471 Scaffold_2 AUGUSTUS transcript 2242676 2243359 0.99 + . g471.t1 Scaffold_2 AUGUSTUS start_codon 2242676 2242678 . + 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_2 AUGUSTUS CDS 2242676 2243359 0.99 + 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_2 AUGUSTUS stop_codon 2243357 2243359 . + 0 transcript_id "g471.t1"; gene_id "g471"; # protein sequence = [MSNPTPAPTTTTSNIHGKSLLREPSIFDGDKAQFKEWRRTLFAYIRDPRNRIVTDSERIDIAVSYMRGPKVSSWVQNY # TDDNFNDDEEEWKVTWKGFKDALNASFLDKGLTENAQEKLEHLRQGPNERAEDFFKEFEVIMRDAGYAKDAPYVIRLIEMNVKPKLIDQVYGTSNERI # EKFDELKQKIISIDCGGVVRKCDEIGQADTSGMLGKDLVARDGNHKRHRLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g471 ### # start gene g472 Scaffold_2 AUGUSTUS gene 2243788 2244552 0.68 + . g472 Scaffold_2 AUGUSTUS transcript 2243788 2244552 0.68 + . g472.t1 Scaffold_2 AUGUSTUS start_codon 2243788 2243790 . + 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_2 AUGUSTUS CDS 2243788 2244552 0.68 + 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_2 AUGUSTUS stop_codon 2244550 2244552 . + 0 transcript_id "g472.t1"; gene_id "g472"; # protein sequence = [MNQTHLNGWRSGYKWTNSLLAIGILRAWMPESRVREASEETVLAIRNLSHATATEAVTNLKSRKRFVRGTRGRELKLR # TTIENIDNGVQIETEALLDSGATGSCINKDFVEQHQLTVKELPVKMPVYNADGTLNKNGSIEGYVQVRMVIGDHAERIDMAVTNLGKTDIFLGIDWLR # YHNPSIDWKESTLTFERCPDKCGYLPHYESPEDDGTEEKLVDGERIFWFDWDGYLSDQGHIKVQTATTDALLLPCRVC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g472 ### # start gene g473 Scaffold_2 AUGUSTUS gene 2246370 2247077 0.36 + . g473 Scaffold_2 AUGUSTUS transcript 2246370 2247077 0.36 + . g473.t1 Scaffold_2 AUGUSTUS start_codon 2246370 2246372 . + 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_2 AUGUSTUS CDS 2246370 2247077 0.36 + 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_2 AUGUSTUS stop_codon 2247075 2247077 . + 0 transcript_id "g473.t1"; gene_id "g473"; # protein sequence = [MIGELPESGGYNAISVFVDHFTKRLRLFATHTTITSEGMARVYRDKVFPIHGMPRKIVHDRGPQYHARFMKELYKLLG # IESNYTTAYHPQTNGQTERINQEIEHYIRLFVNHHQSDWHEWLPMMEFAYNDRVHSATKVSPFYADNGRHPYKGTTPKMTSQNPTAQEFADSMKRIRE # EVGSALKKAAEDMKRQYDKHRNEAIEYKAGDKVWLEGTNITTDRPMKKLGINDLDRLKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g473 ### # start gene g474 Scaffold_2 AUGUSTUS gene 2253414 2254072 0.3 + . g474 Scaffold_2 AUGUSTUS transcript 2253414 2254072 0.3 + . g474.t1 Scaffold_2 AUGUSTUS start_codon 2253414 2253416 . + 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_2 AUGUSTUS CDS 2253414 2253462 0.3 + 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_2 AUGUSTUS CDS 2253525 2254072 0.99 + 2 transcript_id "g474.t1"; gene_id "g474"; Scaffold_2 AUGUSTUS stop_codon 2254070 2254072 . + 0 transcript_id "g474.t1"; gene_id "g474"; # protein sequence = [MDALNALHTASSSSTHNLANSLRRAADLNDQLKQLGSLFDTTKELFLRSILDLQNAGTDPIVVLEALKAAEPNRRAIN # LNEWTLLATLFRWPSPFNLSGLDFDNRTPGEWIELLRSIHSGESTAHIDDKGHLVESSPPPDSATEALEGLKEVERGSADEGTSSQVGGSIPMELDLP # AIESLAEPALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g474 ### # start gene g475 Scaffold_2 AUGUSTUS gene 2257514 2257873 0.95 + . g475 Scaffold_2 AUGUSTUS transcript 2257514 2257873 0.95 + . g475.t1 Scaffold_2 AUGUSTUS start_codon 2257514 2257516 . + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_2 AUGUSTUS CDS 2257514 2257873 0.95 + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_2 AUGUSTUS stop_codon 2257871 2257873 . + 0 transcript_id "g475.t1"; gene_id "g475"; # protein sequence = [MSTPVPPTTPAPPTSAEDLMTQLIKQVANLATAMEERSSSKSSMNKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKS # QAKLIKSALGFFTESAGDWATPHLLHFNVEHPPLEEIGKSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g475 ### # start gene g476 Scaffold_2 AUGUSTUS gene 2257912 2258289 0.44 + . g476 Scaffold_2 AUGUSTUS transcript 2257912 2258289 0.44 + . g476.t1 Scaffold_2 AUGUSTUS start_codon 2257912 2257914 . + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_2 AUGUSTUS CDS 2257912 2258289 0.44 + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_2 AUGUSTUS stop_codon 2258287 2258289 . + 0 transcript_id "g476.t1"; gene_id "g476"; # protein sequence = [MEARSEIKNLKQVKGQTVAEFAQKFKDIGDRTGMSDIDLTNFFTALLPEIRQNLIIVNIAQGLAPTLKEAIKRAISVD # VYMHDPTMTGRNSGHAPTHTAHTTPADPHAMDIDATTLVMGILGRHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g476 ### # start gene g477 Scaffold_2 AUGUSTUS gene 2267021 2269598 0.47 + . g477 Scaffold_2 AUGUSTUS transcript 2267021 2269598 0.47 + . g477.t1 Scaffold_2 AUGUSTUS start_codon 2267021 2267023 . + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_2 AUGUSTUS CDS 2267021 2268361 0.47 + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_2 AUGUSTUS CDS 2268453 2269598 0.98 + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_2 AUGUSTUS stop_codon 2269596 2269598 . + 0 transcript_id "g477.t1"; gene_id "g477"; # protein sequence = [MSSKGKQLARCTRSLLINFSYREYDAKLLLTYWLTRSPLIDPALEGQLGPSATGSVPRVAQMLLNEETGVLTSEDALP # AWTKESGVKFVAKPDQLIKRRGKAGLLALNKSRQEAVTWIKERAGKVQKVESVEGPLTSFILEPFLPHPADSEYYVCINSDRSGDTILFTHEGGVDVG # DVDAKALKLLIPVPTAAAPQTFPGKKAVINTLLSHVPTQARKDALADFIIRLYSVYVDLQYAYLEINPLICMENSVGKVEIHYLDMAAKLDQTAESIV # GQKWAIARDLAIYEGIASSGSGKVTADRGPPMAFPAPFGRSLTKEEAYIQKLDASTGASLKLTVLNAEGRVWTMVAGGGASVVYSDAIAAAGFANELA # NYGEYSGAPTEGQTYEYAKTVIDLMTRGAVNEQGKILIIGGGIANFTNVAATFKGIIRALKEYKSPLIRAKVSIYAMRLLGESLGVPIHVFGPETHIT # AIVPLALGLVKAGDTAAPKSVSQTAPATPPAKATEIAAENPPVGSIGPDGERTQINDQIVHFDSVSTSSAGRPWYRPFDSNTRSFVYGLQPRAIQGML # DFDFSCGRSTPSVAAMIYPFGGHHIQKFYWGTKETLLPVYTSVDEAFKDNKHTDVDCVVNFASSRSVYSSTMDMLRHPTHSQRIKSIALIAEGVPERH # SREILYEAQQKGVLIIGPATVGGIKPGCFRIGNSGGMMDNIIASKLYRAGSVGYVSKSGGMSNELNNILSFTTNGVYEGIAIGGDRYPGSTFIDHLLR # YEKDPECKLMVLLGEVGGVEEYRVIEAVKQGKNHQADSCMGYRHLCWDVQNGSPIRPCWVARWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g477 ### # start gene g478 Scaffold_2 AUGUSTUS gene 2271771 2272967 0.36 - . g478 Scaffold_2 AUGUSTUS transcript 2271771 2272967 0.36 - . g478.t1 Scaffold_2 AUGUSTUS stop_codon 2271771 2271773 . - 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_2 AUGUSTUS CDS 2271771 2272967 0.36 - 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_2 AUGUSTUS start_codon 2272965 2272967 . - 0 transcript_id "g478.t1"; gene_id "g478"; # protein sequence = [MTVNGLPDNYEGHCKILLNDRSDLVSTRNILILYALLRHGNPPELAAETAVHLMYSAALRSSDSSELFHCIKTVYGDV # MSVYQSPMFVSFISRLSPNDVRKKSFPIRGAGSLSIAQSAVKIFGEPLAMLRATHTLNDSRKAMHDVMLSPHRVDYRDRYLSGLQPSHRLSFLRFRES # GVLLHFADHVGSETFQDPNRYVSFLASSSSSLRLPFFRLLFTASGKWVTMDNANPLSSWDVNEVLKTGQAYGLDHADIYGCLFFHVKAQFTEFARRVE # KFHIDIHVSQLDAHVASGLLQKGELNPDLFGINPAFDRIETSNIADYAGIPSVLQDWSAVLNRENKHAVVLVYLMNWVMKRPGASFGMMGEGMGLNLK # GSTNVKVLLERTSSMLVRLNSYEFLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g478 ### # start gene g479 Scaffold_2 AUGUSTUS gene 2274111 2274662 0.98 - . g479 Scaffold_2 AUGUSTUS transcript 2274111 2274662 0.98 - . g479.t1 Scaffold_2 AUGUSTUS stop_codon 2274111 2274113 . - 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_2 AUGUSTUS CDS 2274111 2274662 0.98 - 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_2 AUGUSTUS start_codon 2274660 2274662 . - 0 transcript_id "g479.t1"; gene_id "g479"; # protein sequence = [MADLEADDDNIEMQQYLEHIYMTSKLTPDNRSAARDYGFSESLPIETRSDSRSAHNLKHKLKDGTSKGGSDRHRNHSH # RFEAATSSSGSTTTKYATPPTTASWVQGTTWNDEDTNSPQLKGFSSLLSDQPGELDELDIGLVRPDEQWNYETTTDDHMDIPFPVPLSGSKFDGKRKG # KGKDLGW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g479 ### # start gene g480 Scaffold_2 AUGUSTUS gene 2286736 2287597 0.74 - . g480 Scaffold_2 AUGUSTUS transcript 2286736 2287597 0.74 - . g480.t1 Scaffold_2 AUGUSTUS stop_codon 2286736 2286738 . - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_2 AUGUSTUS CDS 2286736 2287330 0.79 - 1 transcript_id "g480.t1"; gene_id "g480"; Scaffold_2 AUGUSTUS CDS 2287542 2287597 0.75 - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_2 AUGUSTUS start_codon 2287595 2287597 . - 0 transcript_id "g480.t1"; gene_id "g480"; # protein sequence = [MGAINKAALISGQGGGLRSKKSLSSQDHGNGGGSSSGRHTPILRGPGSKPEHADDFGFGTGWKTALEHSRPARKSRGP # LEKDSDKIVSVEGVSLEVKATHLGVVPPSWKRNGLSRGGFHLPRASGGSDSVGGGIEGDMKRSGTSVAHQRQLQPSEHISYDLWGKEGWIRRVLQSRA # KRPFPPPRYDGSIVVHICRVVIAVRSVLAIHGPLIICFAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g480 ### # start gene g481 Scaffold_2 AUGUSTUS gene 2288738 2289301 0.57 - . g481 Scaffold_2 AUGUSTUS transcript 2288738 2289301 0.57 - . g481.t1 Scaffold_2 AUGUSTUS stop_codon 2288738 2288740 . - 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_2 AUGUSTUS CDS 2288738 2289301 0.57 - 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_2 AUGUSTUS start_codon 2289299 2289301 . - 0 transcript_id "g481.t1"; gene_id "g481"; # protein sequence = [MQNNIQDTTSFPQQFISPNDDNVTDLISPPLRPPNEANILNTHEVGLPPSLSGTLTNQPSRASIASSHSSTRSSGNER # GVSKWKGKGKQVLRTLSISSISSLEKDAGGKLSKYAQSSGRGMEVRKSGDFSSFNANDTFQADSPASSFSASPVVPPPLSMPTPVPSPASINLTATQV # PSFPEDIVIFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g481 ### # start gene g482 Scaffold_2 AUGUSTUS gene 2289435 2290676 1 - . g482 Scaffold_2 AUGUSTUS transcript 2289435 2290676 1 - . g482.t1 Scaffold_2 AUGUSTUS stop_codon 2289435 2289437 . - 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_2 AUGUSTUS CDS 2289435 2290676 1 - 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_2 AUGUSTUS start_codon 2290674 2290676 . - 0 transcript_id "g482.t1"; gene_id "g482"; # protein sequence = [MALSVSGLYSPSLEKSNSEFLGSNSTTPSPTSYKSPAELASLVHPNLSETNERQTAAVVSNDYPFHQRSPPPSELKEE # LTRGRRRGQSASARPTLRLHIANPTEPLDNQLNDAQEKAMKSTIQMLQAKAQTAQTLYPRSVVAANSDIHNRRRGETVSDFSRTIHPGSSAPGSGNSL # ITGHMLTNTGSEPAPATVFHSGQVDTRTASSSLIRITTANLNFSAAAVAPTPNSSSPNSTPSSSGSAQNITTKRPYRASPLIGPQAMMSATSGTNSSV # STAPTTIFAEDHYSSASSTSASTVSTPATQESASEFTSRTLSGANVGVSGTRRPLPVPPPSSTIGSTMLSVAPSKAPLSPPIPPPLHPLHIPTRSLTP # SATLSHGPKPLQHGFGHERSSSGDLDLKTNTNDRIAAELGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g482 ### # start gene g483 Scaffold_2 AUGUSTUS gene 2295770 2296135 0.36 + . g483 Scaffold_2 AUGUSTUS transcript 2295770 2296135 0.36 + . g483.t1 Scaffold_2 AUGUSTUS start_codon 2295770 2295772 . + 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_2 AUGUSTUS CDS 2295770 2296135 0.36 + 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_2 AUGUSTUS stop_codon 2296133 2296135 . + 0 transcript_id "g483.t1"; gene_id "g483"; # protein sequence = [MRAFRFIIDSWVAKGRVPSSFYYPPTFEIAQNIQQVEKMINEVPVAAVPPAEDFLETDWAMLQAIGGDDTVLGMGFDE # EAGEVGANDTDDESVSSDGSYIGVGMIEVSAPVSTALPKIESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g483 ### # start gene g484 Scaffold_2 AUGUSTUS gene 2301465 2304207 0.17 + . g484 Scaffold_2 AUGUSTUS transcript 2301465 2304207 0.17 + . g484.t1 Scaffold_2 AUGUSTUS start_codon 2301465 2301467 . + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_2 AUGUSTUS CDS 2301465 2301650 0.91 + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_2 AUGUSTUS CDS 2302444 2302935 0.34 + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_2 AUGUSTUS CDS 2303101 2304207 0.37 + 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_2 AUGUSTUS stop_codon 2304205 2304207 . + 0 transcript_id "g484.t1"; gene_id "g484"; # protein sequence = [MSSSSSNAVTGAPDPALPPVSSPPHPDPAERVVDAAIDELASTLEEPPLGQLALFKSVFGVGDRSSGLPVRRRANSPG # SSNQFIPPVLSERRPVLTIQTPPPSQVSSLPFYSRNLCLIPVPQRSPDVLHPFPRARATAALRAENETLRAEVADLRKLLETSRAETSTLTSLLRDTT # TSLDDRNKDLEASRRALQDVAADRLEYSRVLAQFRAIEAELPEAPLEVGVKRSFEAHEELDAANARAIRMRDRLEDLEETVHRYRARAHVAEELIRKY # PEDEGLYEVDLPSLSSLQNQLTASEAMVRRLATFAHRLYSADPANLLHHHNTYVGGLIEAIIALLSRSLLHPPERMRTVVELALEYLSQGRLTHGELH # LRSTSSLLYYYSNAADRVDGLYQDMFTHSRFSTDAAFLTAAQHAGYVEARPDSLEPPLHRQLFSFDHPIPLPQSPISDHIPAVPMMDSVMLMWEDMIR # TYVREVLGYPASPDRASSPVDVPGSNDPLPTASPLVAPDAPPALDASESVSQDAPLFLPESLSPTSPRPPSPIPSSSRVPHVPREIVDLTMDDAEDLY # ESQEEFLARTDGAVTVKQEDTESEVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g484 ### # start gene g485 Scaffold_2 AUGUSTUS gene 2305432 2306004 0.35 + . g485 Scaffold_2 AUGUSTUS transcript 2305432 2306004 0.35 + . g485.t1 Scaffold_2 AUGUSTUS start_codon 2305432 2305434 . + 0 transcript_id "g485.t1"; gene_id "g485"; Scaffold_2 AUGUSTUS CDS 2305432 2306004 0.35 + 0 transcript_id "g485.t1"; gene_id "g485"; Scaffold_2 AUGUSTUS stop_codon 2306002 2306004 . + 0 transcript_id "g485.t1"; gene_id "g485"; # protein sequence = [MYMRSISSIQWFFNNAVDEDEGLYRMILEHSRFDSDSPFLTAAHHAGFVPPPDDSVEPPLHRRMLALSTALPHSEGVG # RWEDIVPALPSIDQLTADWEQMMLQYIHHITDTPLPGTDSQGPMSSVEPATESLPEVLVQQSPEAPAALESTSSVGHPLVPLFLPEQESLTSPSPTLP # PLRVRCQSSHRPYG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g485 ### # start gene g486 Scaffold_2 AUGUSTUS gene 2308912 2309478 0.94 - . g486 Scaffold_2 AUGUSTUS transcript 2308912 2309478 0.94 - . g486.t1 Scaffold_2 AUGUSTUS stop_codon 2308912 2308914 . - 0 transcript_id "g486.t1"; gene_id "g486"; Scaffold_2 AUGUSTUS CDS 2308912 2309478 0.94 - 0 transcript_id "g486.t1"; gene_id "g486"; Scaffold_2 AUGUSTUS start_codon 2309476 2309478 . - 0 transcript_id "g486.t1"; gene_id "g486"; # protein sequence = [MLRASDSSATEGVQQPKDPESGDPSSEQGGVVRELDKEESKRQETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYD # IKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSSSSPAGAPVLFAKKKDGTLRLCVDYRALNKITKKNRYPLPLIGTLVDQLRKAKIFT # KIDLRAGTTTSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g486 ### # start gene g487 Scaffold_2 AUGUSTUS gene 2314521 2315831 0.89 - . g487 Scaffold_2 AUGUSTUS transcript 2314521 2315831 0.89 - . g487.t1 Scaffold_2 AUGUSTUS stop_codon 2314521 2314523 . - 0 transcript_id "g487.t1"; gene_id "g487"; Scaffold_2 AUGUSTUS CDS 2314521 2315831 0.89 - 0 transcript_id "g487.t1"; gene_id "g487"; Scaffold_2 AUGUSTUS start_codon 2315829 2315831 . - 0 transcript_id "g487.t1"; gene_id "g487"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g487 ### # start gene g488 Scaffold_2 AUGUSTUS gene 2318575 2319552 0.54 - . g488 Scaffold_2 AUGUSTUS transcript 2318575 2319552 0.54 - . g488.t1 Scaffold_2 AUGUSTUS stop_codon 2318575 2318577 . - 0 transcript_id "g488.t1"; gene_id "g488"; Scaffold_2 AUGUSTUS CDS 2318575 2319552 0.54 - 0 transcript_id "g488.t1"; gene_id "g488"; Scaffold_2 AUGUSTUS start_codon 2319550 2319552 . - 0 transcript_id "g488.t1"; gene_id "g488"; # protein sequence = [MVQCEPESVGEFPPEQFDQKRQLHGSDGRFLAQKHSSPRSTEVPEFFNPGNTATRSPQLRSGTSPTVHALAQNSTPPP # RVNLQTKPLTPVSTQRYQFGEVRMDGAQHSSRISGQDLTARLAPNPVHVPPRLSNPSVIPYQGSVSMQSQAVGTESQRGPNQRRTLTVHEEAVLPQGA # PFGTPFVTGAQTNRPGMAFESAHSQESVAMIQQQARVIETLQEQLREVKEGFTAGEVPTGGPLSKTGNTAGLSGRAPRVMREYTRGGPSPVVPQPRSW # QATEPISFNRNTPTGAKDGNPQVEQAGQIPDTPSVDRRRIHEWEPECKELN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g488 ### # start gene g489 Scaffold_2 AUGUSTUS gene 2320758 2321144 0.81 - . g489 Scaffold_2 AUGUSTUS transcript 2320758 2321144 0.81 - . g489.t1 Scaffold_2 AUGUSTUS stop_codon 2320758 2320760 . - 0 transcript_id "g489.t1"; gene_id "g489"; Scaffold_2 AUGUSTUS CDS 2320758 2321144 0.81 - 0 transcript_id "g489.t1"; gene_id "g489"; Scaffold_2 AUGUSTUS start_codon 2321142 2321144 . - 0 transcript_id "g489.t1"; gene_id "g489"; # protein sequence = [MSATSMERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGRYRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g489 ### # start gene g490 Scaffold_2 AUGUSTUS gene 2323424 2323921 1 + . g490 Scaffold_2 AUGUSTUS transcript 2323424 2323921 1 + . g490.t1 Scaffold_2 AUGUSTUS start_codon 2323424 2323426 . + 0 transcript_id "g490.t1"; gene_id "g490"; Scaffold_2 AUGUSTUS CDS 2323424 2323921 1 + 0 transcript_id "g490.t1"; gene_id "g490"; Scaffold_2 AUGUSTUS stop_codon 2323919 2323921 . + 0 transcript_id "g490.t1"; gene_id "g490"; # protein sequence = [MSSTTSASNGALQSGGSKVSSPSTSSIPQSAPAGLLSMTQPPQASTSFFKIASGEVVTFAWSFSGVLATPTSLTVNAV # GANSFTYSLTSLPGTASSYIWTPYDYQQSHLATPLAQTTYSLEIFDERGLGATIRPGYLSPNTALTFALYTPQPYTPLASASIFIQA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g490 ### # start gene g491 Scaffold_2 AUGUSTUS gene 2330285 2331013 0.66 - . g491 Scaffold_2 AUGUSTUS transcript 2330285 2331013 0.66 - . g491.t1 Scaffold_2 AUGUSTUS stop_codon 2330285 2330287 . - 0 transcript_id "g491.t1"; gene_id "g491"; Scaffold_2 AUGUSTUS CDS 2330285 2331013 0.66 - 0 transcript_id "g491.t1"; gene_id "g491"; Scaffold_2 AUGUSTUS start_codon 2331011 2331013 . - 0 transcript_id "g491.t1"; gene_id "g491"; # protein sequence = [MINTSTSTTASAVSQPPSSPPRMPPSSPPRQLLKSPNKVPKTKGGRMSGLISRFTLGSSTSLAVSPHSMSPDSVPPVP # PLNVDELGQVVSDPFAKDDLTTIDTTAPARTLSSVDSVTLSSVLNSPVVLSNEVNAGIIITRRERSGTTATATSTFSSSTADSSNSTSNSSPERQSLA # KKKRRSLGLTLGTVSIGSMGGMRSPTKGINRGKKRKLVISGIESDDSRGYQAVKNLVREFWRVEEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g491 ### # start gene g492 Scaffold_2 AUGUSTUS gene 2331396 2333499 0.2 - . g492 Scaffold_2 AUGUSTUS transcript 2331396 2333499 0.2 - . g492.t1 Scaffold_2 AUGUSTUS stop_codon 2331396 2331398 . - 0 transcript_id "g492.t1"; gene_id "g492"; Scaffold_2 AUGUSTUS CDS 2331396 2331859 0.28 - 2 transcript_id "g492.t1"; gene_id "g492"; Scaffold_2 AUGUSTUS CDS 2331948 2333499 0.45 - 0 transcript_id "g492.t1"; gene_id "g492"; Scaffold_2 AUGUSTUS start_codon 2333497 2333499 . - 0 transcript_id "g492.t1"; gene_id "g492"; # protein sequence = [MSTGMCLDSCLKDIQPIFYYGAVDSQLLHQVEPEDDAGDVSTNSASSVYPPPYEVDLVNLPPMTFKPGRRTDDFDDFG # SSEVDSDEEIDGRNKVLYLSSFTLLRRFQLISVQPLPAPPASTTLLSPESHGLLASNSPSNISHIPNFSTSTVSSYTTASSTSSVPVTPITPNTPVTP # FLSTSPGFPSSTSLSRASSFSRTQSPTVAYSHSGPGIRSRQPSIVSLAGGYHLPTMVAGKNSPTIGHKSSLPLLNDTDIDADVDPDVDGYFSRVSGET # NRPAARLTRQPSLGSRPGLDFRIPLGSTLSSPLGSEALSAGVMRRYASAGNLFSTSLSRPGSSNSGHQHSYSHPTSFPTASAPLSPYSSTPSPFPDPS # LEIIPSSTYRAGSSAAPASDSRNRSRAGSTVLRNAVYIEALDSSEVERRLLNLPSVYDRDHSEKEYSDPSASEREQDNIDFEQSKWSPASSVVDLRSL # GPKISTDVSSNLNWGLPKMMGVHAPPPTPSTPFSASRSGSYIGLADAVSASSIPSPSSPSQSQSDPKKSQGEDMSVPPVTPGRRQRLASFIARMAGNT # ASQIPPVPLTPSASLPVSPANAAPSVPSAPPSPTKSRTTQYRPAPLDLSLKPKNFPTIDSGSTAGTSEPSTPAYSGSTSSWNDDSGSEPKRRMKRTWR # TWTRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g492 ### # start gene g493 Scaffold_2 AUGUSTUS gene 2339364 2340242 1 - . g493 Scaffold_2 AUGUSTUS transcript 2339364 2340242 1 - . g493.t1 Scaffold_2 AUGUSTUS stop_codon 2339364 2339366 . - 0 transcript_id "g493.t1"; gene_id "g493"; Scaffold_2 AUGUSTUS CDS 2339364 2340242 1 - 0 transcript_id "g493.t1"; gene_id "g493"; Scaffold_2 AUGUSTUS start_codon 2340240 2340242 . - 0 transcript_id "g493.t1"; gene_id "g493"; # protein sequence = [MVALTRAQAKRAAAAASTSTTAAADSQTPTKKLGLRNHVISSRTKTSGTPGAGSSQCPTKQGPLASKKKTPRRPATPA # FTAVESSTEPIQHPKTLESETITHIPTETHPFAEPDDAEPFGSEIGWVRIGNSLRRESVLPEGVMSQIQAQQQAKLTHLADEAYKEQTTEMMQQHNLT # YQWYDRMMTEGLQNGQGSNGSVMVMGDTSDIAMKDDHDLVGGFNGNSDEKDCEMEIPYYLAIESDTAEASSFDDTMSGAESDCLNVVLFGKKQLQPCP # PGVRYSLLSTPTEIIPQY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g493 ### # start gene g494 Scaffold_2 AUGUSTUS gene 2341962 2343086 0.84 - . g494 Scaffold_2 AUGUSTUS transcript 2341962 2343086 0.84 - . g494.t1 Scaffold_2 AUGUSTUS stop_codon 2341962 2341964 . - 0 transcript_id "g494.t1"; gene_id "g494"; Scaffold_2 AUGUSTUS CDS 2341962 2343086 0.84 - 0 transcript_id "g494.t1"; gene_id "g494"; Scaffold_2 AUGUSTUS start_codon 2343084 2343086 . - 0 transcript_id "g494.t1"; gene_id "g494"; # protein sequence = [MQGSHDWQDTLGKGYEEDGYIASRADPCVRYRRIGDEYTLSTTYGDDVNGASSSEIGRKRAIADLGKRWESGEVNSGV # LLGMTIFQDPDSKSITISQKSYFERMLEHFGLENVRIRPTPLDPKAKITESPNPIPEIDRKFMSNKPYRSFIGSVLWGACSTRPDIAFASNFLARFQL # NPGITHWNACEWLAGYIRGTIDYSITYSAPNPGDDRLGLGLAPLGYSDSDWASCLVTRRSTAGYIFFMGGAPVSWASKRQASVALSTVKAEYIGLSKA # CQQACWIRSFIQEIDLPLQGATFIYGDNFGSVSLSEEPRNHSLIKHIDMREHYIREKVKDGSVKVVRIRSGENVADITTKPLSGNTHTQMIKMLNLQH # TQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g494 ### # start gene g495 Scaffold_2 AUGUSTUS gene 2343629 2344270 0.64 - . g495 Scaffold_2 AUGUSTUS transcript 2343629 2344270 0.64 - . g495.t1 Scaffold_2 AUGUSTUS stop_codon 2343629 2343631 . - 0 transcript_id "g495.t1"; gene_id "g495"; Scaffold_2 AUGUSTUS CDS 2343629 2344270 0.64 - 0 transcript_id "g495.t1"; gene_id "g495"; Scaffold_2 AUGUSTUS start_codon 2344268 2344270 . - 0 transcript_id "g495.t1"; gene_id "g495"; # protein sequence = [MSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAED # INLQLSSEKLGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNPINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVK # WKGYDAGHNSWEPAPNLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g495 ### # start gene g496 Scaffold_2 AUGUSTUS gene 2344432 2347335 0.91 - . g496 Scaffold_2 AUGUSTUS transcript 2344432 2347335 0.91 - . g496.t1 Scaffold_2 AUGUSTUS stop_codon 2344432 2344434 . - 0 transcript_id "g496.t1"; gene_id "g496"; Scaffold_2 AUGUSTUS CDS 2344432 2347335 0.91 - 0 transcript_id "g496.t1"; gene_id "g496"; Scaffold_2 AUGUSTUS start_codon 2347333 2347335 . - 0 transcript_id "g496.t1"; gene_id "g496"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVAD # IISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVRE # VLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQ # QEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDII # TDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNQQQTVLKPGHFTKIAASILRNPLEDRIRKASEREAQV # LEGLETVKKHGLQRLANGIAEWEEDNGLVYYRGRVYVPADNNLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEICARKKIQ # RHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHLNPTADLSSQLNSCDPSSL # DWELNQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g496 ### # start gene g497 Scaffold_2 AUGUSTUS gene 2347664 2348539 0.96 - . g497 Scaffold_2 AUGUSTUS transcript 2347664 2348539 0.96 - . g497.t1 Scaffold_2 AUGUSTUS stop_codon 2347664 2347666 . - 0 transcript_id "g497.t1"; gene_id "g497"; Scaffold_2 AUGUSTUS CDS 2347664 2348539 0.96 - 0 transcript_id "g497.t1"; gene_id "g497"; Scaffold_2 AUGUSTUS start_codon 2348537 2348539 . - 0 transcript_id "g497.t1"; gene_id "g497"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKL # IKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTAL # LPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTLTLPLPTLTPWTLMLLIPALGIAGRPSLPVCADDVLVVELKAMLSR # IAHTRRLPADTVDAGDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g497 ### # start gene g498 Scaffold_2 AUGUSTUS gene 2349822 2351168 0.57 - . g498 Scaffold_2 AUGUSTUS transcript 2349822 2351168 0.57 - . g498.t1 Scaffold_2 AUGUSTUS stop_codon 2349822 2349824 . - 0 transcript_id "g498.t1"; gene_id "g498"; Scaffold_2 AUGUSTUS CDS 2349822 2351168 0.57 - 0 transcript_id "g498.t1"; gene_id "g498"; Scaffold_2 AUGUSTUS start_codon 2351166 2351168 . - 0 transcript_id "g498.t1"; gene_id "g498"; # protein sequence = [MQGEGKGTMYEVQAHFPPSFANFARSLNKPVDIQTWHRRLGHPAIDRILLMHRHNLVDGLQITSKKVAGKCEPCILGK # STHRLFDEKLTHETKVLERIHLDLFGPTRTQSIGGATWMFLATDGRSSVKAPTFLTNKRKETVLTAIHDWRTMAEQQTGLKVLIFRIDGGGEFDNGWF # RDYCREHGIVIEMIPPRSSSANGVAERANRTVLDGVRTFLVDAGFPPSMWAEAALTFCYVNAFIPSSRFPGEIPIEIYTKKRHDVSHLRPFGCKCWAT # LDAIQTDGKLGVRAVEGRFVGYIGRRGYRIWLPQTRSFHESRSVEFEEGDPRRSAPAVPDEVDGEVFVDVDVGSAPDAVPGSPANENQIDHSTVSIPS # ISTTPSTPNYEGLAELFANQALLNLYQYQLLIQTLVRDAVLVFDNHQLAKSNLRNQLKESGLLSNGTLRGLKTLVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g498 ### # start gene g499 Scaffold_2 AUGUSTUS gene 2352285 2352653 0.76 - . g499 Scaffold_2 AUGUSTUS transcript 2352285 2352653 0.76 - . g499.t1 Scaffold_2 AUGUSTUS stop_codon 2352285 2352287 . - 0 transcript_id "g499.t1"; gene_id "g499"; Scaffold_2 AUGUSTUS CDS 2352285 2352653 0.76 - 0 transcript_id "g499.t1"; gene_id "g499"; Scaffold_2 AUGUSTUS start_codon 2352651 2352653 . - 0 transcript_id "g499.t1"; gene_id "g499"; # protein sequence = [MSSTASSLSIPRFPESSQLAGENTWRVFKDQVLAHIEVRELEGYLDGTIVRPPVGGYVSTSTLYPPASTSTPAYSPTP # FPHEWRQRDRMAASIIYLNIVDPVGLGVERENLRTTSGLNEEEI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g499 ### # start gene g500 Scaffold_2 AUGUSTUS gene 2358348 2359478 0.63 - . g500 Scaffold_2 AUGUSTUS transcript 2358348 2359478 0.63 - . g500.t1 Scaffold_2 AUGUSTUS stop_codon 2358348 2358350 . - 0 transcript_id "g500.t1"; gene_id "g500"; Scaffold_2 AUGUSTUS CDS 2358348 2359478 0.63 - 0 transcript_id "g500.t1"; gene_id "g500"; Scaffold_2 AUGUSTUS start_codon 2359476 2359478 . - 0 transcript_id "g500.t1"; gene_id "g500"; # protein sequence = [MQLFDECKDGLILCKLINDSVPDTIDTRVLNKPSGRKPLNAFQITENNNIVITSAKAIGCSVVNIGSSDIAEGREHLI # LGLIWQIIRRGLLAQVDIKLHPELYRLCEDGETIDDLLRLTPDQILLRWFNYHLKAAGWKRRVNNFSRDVSDGENYTVLLHQLQPASCSLSPLQTPDL # RTRAEQVLQNADSIGCRKYLTPSSLVSGNPRLNLAFVANLFNTYPGLEPLDEQEAKDYGVVDDFDAEGEREARVFTLWLNSLGVEPGVFNLFENLKDG # LIIIQAFDKIFPGSVVWRRVSKPKEGAGHASWAPSGDGDDEDVDIGVKPNQSTLSRFKAVENTNYVVELGKGHGMHLVGIQGADITDGQKTLVLGLVW # QLMR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g500 ### # start gene g501 Scaffold_2 AUGUSTUS gene 2371278 2373283 0.5 - . g501 Scaffold_2 AUGUSTUS transcript 2371278 2373283 0.5 - . g501.t1 Scaffold_2 AUGUSTUS stop_codon 2371278 2371280 . - 0 transcript_id "g501.t1"; gene_id "g501"; Scaffold_2 AUGUSTUS CDS 2371278 2372573 0.68 - 0 transcript_id "g501.t1"; gene_id "g501"; Scaffold_2 AUGUSTUS CDS 2372702 2373283 0.5 - 0 transcript_id "g501.t1"; gene_id "g501"; Scaffold_2 AUGUSTUS start_codon 2373281 2373283 . - 0 transcript_id "g501.t1"; gene_id "g501"; # protein sequence = [MCPTGSNVPSLAGSKASSPIRDESEIVNSFTKTPSPLLLPVEPVTLVMTPMARKESRSPFTEYRPLPRSDTQEWQQDL # DVYRPLSTPDNPYQKTDFLRQDLNSPTSARGPSLGYGNEEKAPESLFQVPTSRSRPASTSYSQAPSRPQSAAESPRPSSPSVLLERGLSTVAQGHDDS # QKITTTGRSSRSVPRLDMWKQLKTEAATRDIGVIKGQDRQEMTKVDLSDEVEEGEERESARIVENPQRPDSIHRLLSPSPFTITPYGNNSHHDQRQRG # SVHVHPDSSSTSSRPWLATSVEHRRTYASSPNSSPRLHGTHITPYDSGIANGYLSRNSINHLKRKGNGNDERDLSSSASEHLYPRDIDHSHPQPHKLV # KVMRDGQVVASPVDFDSRNGMFVERRRDGRMERYGELSYPQLHTPSYAYPSVKSQGSTSHMNGMHRLSQRSSTPPQSAIPMSISPVSPSSPVAPAPLS # QPNPKSTVEQSHQGHHSTAPPTDSHENLDTPTNAKPSSKRILITPSHAHPVQPYPGLPMKPVDSAIQLHPGLPKKPFFEPVDTSKQRTNEKARSDGWR # NASNSYPGRSGSDGWYTSTIDTNGSGTWKSWATAPRSAMAMVRIKLIRTPLAPVLRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g501 ### # start gene g502 Scaffold_2 AUGUSTUS gene 2373436 2375220 0.57 - . g502 Scaffold_2 AUGUSTUS transcript 2373436 2375220 0.57 - . g502.t1 Scaffold_2 AUGUSTUS stop_codon 2373436 2373438 . - 0 transcript_id "g502.t1"; gene_id "g502"; Scaffold_2 AUGUSTUS CDS 2373436 2373663 0.58 - 0 transcript_id "g502.t1"; gene_id "g502"; Scaffold_2 AUGUSTUS CDS 2373784 2375220 0.58 - 0 transcript_id "g502.t1"; gene_id "g502"; Scaffold_2 AUGUSTUS start_codon 2375218 2375220 . - 0 transcript_id "g502.t1"; gene_id "g502"; # protein sequence = [MNIGYFTQHRRASGSALGSHIIHNGLTASPQSANISPVSLHRVPASVGGPNFPGLGPSEGYAARSSANNEHATHPHMS # PRQTHRAHPAPTSSAQSQHALPTPSIPFVPTPPLTTAQLSQGLHLIPSYPSHPTHPTSSNSASTAATAQTATQAILSTTQRTLEHTWNTILTSVDSEV # AKLHTAHAGQIRVWADYVDGVRKESDAYKLRMESFQRDADRIRREREMYRLKSRDLENQIDEIRRRAESQRLPEVPEPVAHSQIELQEGRRKYEDQED # GSHDTEQTSNDLIDRLRRERDDLKMQVAGLTTGSHPQNHSRSHSEHLQKLQNEHLSLSASYNTLLNAHSQLQATHTSLLATHNHLQITHTELRSTYDS # CQTTYTALRREFEDLLEREEKARIKLGIAEESLKGERERAFELDEARKREKKGRKEREKEVEELRGKVYDLERHSTNGVRKETPDTFKETGPEENRTD # SGQSQHEFQIATPIRPPSPQLRRSPHRQDVVNFDADDSFANIPSTNGSFDALPATILASCTPYIAYISTTACGSSRCQYKSTIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g502 ### # start gene g503 Scaffold_2 AUGUSTUS gene 2385011 2387094 0.9 - . g503 Scaffold_2 AUGUSTUS transcript 2385011 2387094 0.9 - . g503.t1 Scaffold_2 AUGUSTUS stop_codon 2385011 2385013 . - 0 transcript_id "g503.t1"; gene_id "g503"; Scaffold_2 AUGUSTUS CDS 2385011 2386886 0.9 - 1 transcript_id "g503.t1"; gene_id "g503"; Scaffold_2 AUGUSTUS CDS 2387045 2387094 0.9 - 0 transcript_id "g503.t1"; gene_id "g503"; Scaffold_2 AUGUSTUS start_codon 2387092 2387094 . - 0 transcript_id "g503.t1"; gene_id "g503"; # protein sequence = [MNDRLFSATTLQVCRCITLAQLPPRKHSILFRYDFPFTVQLTLILFVQPSTDFITIDMKPSYSSSGSPYSSGSRSMHE # TSRPYPYFPPRRPIQRSLFADKQNPHTPPESMLFGPLLPQISPTANLHEGTNHTYLPRTNPHHSAKLSPTARATQPQPGNLLSSKASLSQVQPRPQPL # PSPLKSFFDFTVQNLYSGLTHLQSAWNTALYKERKDKEVMRTYLLKMQRERDIALERARDLELKCASASYSVVEAGKAEKRPREDDAEGDYNGYSGNI # QLPTPPASGTFPSSNTVNRHLLNVSPVETDDWCSLVYPNESSVSPSPPPPPISGCQMFFPTDIHLTSSSPDPPSKPLASSFKTPVSNLALPSHSSRPS # RPPSPTGSDQGSVCSSSSSKRRRLSTDSLSSHSSCVTAFETLQDDSLFEGRAPSRSSRDSSAIDMTRRVSNETNSDDSEGECDMDISEDDSNSEMDFG # RESPTPSLGLVGKKLLFNEETVEEVHIPSESLVQGDRTAASFTAVEQKAITSSFKLDIPRLNLQDLNRMYFNYDGIIYCRACWCAILVVTLNLSSVLS # EFYSSRKPHTRWRCSSPLPLMYARQVDLDVLMNHCTSQHPVAYSDVAGLSLDQVFRLQKLLKANVPSNETSTI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g503 ### # start gene g504 Scaffold_2 AUGUSTUS gene 2387979 2388446 0.44 + . g504 Scaffold_2 AUGUSTUS transcript 2387979 2388446 0.44 + . g504.t1 Scaffold_2 AUGUSTUS start_codon 2387979 2387981 . + 0 transcript_id "g504.t1"; gene_id "g504"; Scaffold_2 AUGUSTUS CDS 2387979 2388446 0.44 + 0 transcript_id "g504.t1"; gene_id "g504"; Scaffold_2 AUGUSTUS stop_codon 2388444 2388446 . + 0 transcript_id "g504.t1"; gene_id "g504"; # protein sequence = [MEKAALIKKILSKDGQGAPSEGSGVGHRVTDDAEPSIREEQPETGFPSASPTVISQVPIILDPRILAPQSFPSSSSAL # AGALGPTSFDVNPSEHPAPLNDIHDIPPTPVVNDSVPEPMLATNEGFDTSRCCSVKGCTFVLSRKSYLPSCGKYAFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g504 ### # start gene g505 Scaffold_2 AUGUSTUS gene 2389072 2389731 0.78 + . g505 Scaffold_2 AUGUSTUS transcript 2389072 2389731 0.78 + . g505.t1 Scaffold_2 AUGUSTUS start_codon 2389072 2389074 . + 0 transcript_id "g505.t1"; gene_id "g505"; Scaffold_2 AUGUSTUS CDS 2389072 2389731 0.78 + 0 transcript_id "g505.t1"; gene_id "g505"; Scaffold_2 AUGUSTUS stop_codon 2389729 2389731 . + 0 transcript_id "g505.t1"; gene_id "g505"; # protein sequence = [MHGRLRVEREKSGLLPGKGLNHATAHGSEGGISGETTVDDRDQATDDDDGDSDNDQIDEDGLDQQLETEDVASINGYN # HNTDNGDILDTERRVRQHASKLMMAKIAADRRREKNRARRHKHEAKKVLTGKAPTKRKTATSRAKFDVKEKANSNVLTPRIAVSVSVSAEPCTVEEVP # NKSKEVLQLEVDVAKTSEMVDSSNDDACTKPSAVSFISNFVGS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g505 ### # start gene g506 Scaffold_2 AUGUSTUS gene 2389879 2390541 0.65 + . g506 Scaffold_2 AUGUSTUS transcript 2389879 2390541 0.65 + . g506.t1 Scaffold_2 AUGUSTUS start_codon 2389879 2389881 . + 0 transcript_id "g506.t1"; gene_id "g506"; Scaffold_2 AUGUSTUS CDS 2389879 2390541 0.65 + 0 transcript_id "g506.t1"; gene_id "g506"; Scaffold_2 AUGUSTUS stop_codon 2390539 2390541 . + 0 transcript_id "g506.t1"; gene_id "g506"; # protein sequence = [MISSSSAGHNEESSTASEVSVDKVETTDAASKNSADKINSPTHTATSVPRDTAVYPYPYPSYHYTTYPHHYTYTNTSA # MPSLVVAPTTVPYSNPYMYPYPYGYHHTSVSSPSSFATSSLPFIISPVPVSASATSVSAPASSTKKKRRKVKKEGLAPAEAVASPSSQVVDNDRQDAL # SDATTGTETEAMSGEPQAGSQTSDRRMDVDTNNTLLSPLSANHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g506 ### # start gene g507 Scaffold_2 AUGUSTUS gene 2391016 2391936 0.9 + . g507 Scaffold_2 AUGUSTUS transcript 2391016 2391936 0.9 + . g507.t1 Scaffold_2 AUGUSTUS start_codon 2391016 2391018 . + 0 transcript_id "g507.t1"; gene_id "g507"; Scaffold_2 AUGUSTUS CDS 2391016 2391936 0.9 + 0 transcript_id "g507.t1"; gene_id "g507"; Scaffold_2 AUGUSTUS stop_codon 2391934 2391936 . + 0 transcript_id "g507.t1"; gene_id "g507"; # protein sequence = [MSVASDLVPSVEVTPVEDSRKRNHSEVESEVGPNNSSIGGQAKDTEQVDQHPPPRRKRPSRAKKQEKLEPEEATTHNT # YSGYIPPSYMYSSNHMHPSRYYAGYVSTPPNPSAQTATTYIPLNSSPASASTSPSNLPTPATPHAAPTYAYYPPHSYMQAPGYHDPYIFSSPSSYPPP # YTYPYSGLYTYPSHASYTGYGASAYPGYPAYPSQSTEYCMPDIPLGSNPSKSKSKYAEVLETRASLKSKEKVGKGSKPLSGEGIAPASDDVPENEVEA # KTLQIETRSAPVTSSAISEVSHITIAFCFLII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g507 ### # start gene g508 Scaffold_2 AUGUSTUS gene 2398299 2398721 0.57 - . g508 Scaffold_2 AUGUSTUS transcript 2398299 2398721 0.57 - . g508.t1 Scaffold_2 AUGUSTUS stop_codon 2398299 2398301 . - 0 transcript_id "g508.t1"; gene_id "g508"; Scaffold_2 AUGUSTUS CDS 2398299 2398721 0.57 - 0 transcript_id "g508.t1"; gene_id "g508"; Scaffold_2 AUGUSTUS start_codon 2398719 2398721 . - 0 transcript_id "g508.t1"; gene_id "g508"; # protein sequence = [MINQSHKQRHAYLRSYYSEVGSSFDPDMEDAAEWEHELHGMFSLLILFTILDVISVEPEPTQSSFQPVNQDMQEMVEM # TPEELEQAELEAYAEECERQAAFADFEDIPYEELFNDEDLLELMTDNKDGRNQSGDVDMDTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g508 ### # start gene g509 Scaffold_2 AUGUSTUS gene 2412305 2413130 0.76 + . g509 Scaffold_2 AUGUSTUS transcript 2412305 2413130 0.76 + . g509.t1 Scaffold_2 AUGUSTUS start_codon 2412305 2412307 . + 0 transcript_id "g509.t1"; gene_id "g509"; Scaffold_2 AUGUSTUS CDS 2412305 2412380 0.84 + 0 transcript_id "g509.t1"; gene_id "g509"; Scaffold_2 AUGUSTUS CDS 2412439 2412791 0.77 + 2 transcript_id "g509.t1"; gene_id "g509"; Scaffold_2 AUGUSTUS CDS 2412861 2413130 0.98 + 0 transcript_id "g509.t1"; gene_id "g509"; Scaffold_2 AUGUSTUS stop_codon 2413128 2413130 . + 0 transcript_id "g509.t1"; gene_id "g509"; # protein sequence = [MYVSSIPPNIPEFLEVGYQLAFGDSGQQIRSNLVPTETVNPALASFLNLINLPRIFKKLLSKFYSYKDPIYANLLNVM # HAKTIPEERDLIVKRDQFREAWHEQWAKEGLDFVITVPAPFPAVKHGEGLKASLMTASYSFLFNLLDYAAGSLPVTKVDKNLDALPANFMSSPEYNAM # NMICKTSYTVYDAESMHGLPVGVQIIGQRLEEEKVLEGMKVIQSVLIQKGIAFEGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g509 ### # start gene g510 Scaffold_2 AUGUSTUS gene 2416068 2416364 0.93 + . g510 Scaffold_2 AUGUSTUS transcript 2416068 2416364 0.93 + . g510.t1 Scaffold_2 AUGUSTUS start_codon 2416068 2416070 . + 0 transcript_id "g510.t1"; gene_id "g510"; Scaffold_2 AUGUSTUS CDS 2416068 2416364 0.93 + 0 transcript_id "g510.t1"; gene_id "g510"; Scaffold_2 AUGUSTUS stop_codon 2416362 2416364 . + 0 transcript_id "g510.t1"; gene_id "g510"; # protein sequence = [MEQNLRQLKLDFNEQTEDSPPLEENEGEVLEWDWDIEHADRKAEAKADAALHGALPFEVDRKVLKDVVRENMGAEVVR # IKFLSAGKSSSRYLECRKPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g510 ### # start gene g511 Scaffold_2 AUGUSTUS gene 2416541 2417735 0.65 + . g511 Scaffold_2 AUGUSTUS transcript 2416541 2417735 0.65 + . g511.t1 Scaffold_2 AUGUSTUS start_codon 2416541 2416543 . + 0 transcript_id "g511.t1"; gene_id "g511"; Scaffold_2 AUGUSTUS CDS 2416541 2416701 0.65 + 0 transcript_id "g511.t1"; gene_id "g511"; Scaffold_2 AUGUSTUS CDS 2416757 2417735 0.72 + 1 transcript_id "g511.t1"; gene_id "g511"; Scaffold_2 AUGUSTUS stop_codon 2417733 2417735 . + 0 transcript_id "g511.t1"; gene_id "g511"; # protein sequence = [MQYLREHTSIPVPIVYHYDSNPYNRLGGEFIIMSKVRTIGSNSIQLMLTSSIGSLLTNLAELVIPLFAHRFPELGSLY # FGPNPRANTDASAPTPKALQMHYSAFPFSPTLPLSPLPSAKPSGQNSSYAFPKSVSQQEFHVGPIISWPFFGSNRGDLVHPNEINRGPWSTTQSYLES # CVQREVTGVIRENEGKAAPHKLHLDPDEIMSSRHHHVKAVPGDESDDSDEWDLEESEEEWEGPGDVMYRDYRRMQRTTFLVAHTKEREDCVRKEMARW # SRLMERLMKHEREVKGVTTQSQALLPEEFGLDCHDLSLENVFVDSVDHHKIVSLPSNAYLALTATFSLRLVSLIGNQQLLVLFGPVLTFQRSCSLARS # QGKYLEM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g511 ### # start gene g512 Scaffold_2 AUGUSTUS gene 2417876 2418430 0.48 + . g512 Scaffold_2 AUGUSTUS transcript 2417876 2418430 0.48 + . g512.t1 Scaffold_2 AUGUSTUS start_codon 2417876 2417878 . + 0 transcript_id "g512.t1"; gene_id "g512"; Scaffold_2 AUGUSTUS CDS 2417876 2418430 0.48 + 0 transcript_id "g512.t1"; gene_id "g512"; Scaffold_2 AUGUSTUS stop_codon 2418428 2418430 . + 0 transcript_id "g512.t1"; gene_id "g512"; # protein sequence = [MRLRMAHRFIEWDGWEEGLANSMLGEEEHEESWFVDVTYYDSNLTSPPMTGNGTHAGSGMQTVGQPFGLDQVAEAAGP # SGSGAGPGGGGGDGDQGGESILGSPLTRRKPTSKLKKLPFVSEFEKEQMLDTTGDICGGRGGELGRRLEAWLTVNGHEPNTSAPIDGPRRRWHNDDVD # GVESGEPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g512 ### # start gene g513 Scaffold_2 AUGUSTUS gene 2428771 2429844 0.68 - . g513 Scaffold_2 AUGUSTUS transcript 2428771 2429844 0.68 - . g513.t1 Scaffold_2 AUGUSTUS stop_codon 2428771 2428773 . - 0 transcript_id "g513.t1"; gene_id "g513"; Scaffold_2 AUGUSTUS CDS 2428771 2429844 0.68 - 0 transcript_id "g513.t1"; gene_id "g513"; Scaffold_2 AUGUSTUS start_codon 2429842 2429844 . - 0 transcript_id "g513.t1"; gene_id "g513"; # protein sequence = [MIAVRDARMHEVDPLIGVVVLPLQQLFVKRGRSQITDTFPLVGGIGYGRLKCSLVFRSVQIQPSQEYFPKASLGWDVG # TLEVKSETMRASGSLPDDLKSARILLRTLYGRDKALPNSLHDGWHQKKDRPVRLAVKNRFASCLLIQFRKTALGPDKTPAFGTLWLKDLPDLEEVTVR # ISVRRNEGNAMVRGRFNASDDIGEKVGELEMQVQFWPGLSGYHHWLADQDPSLADVMEVLDAAEESEEVSKEMLYEEGLDSDAELMSSSSSSSSPSPS # SSSSDESSDVKGGRVKNVKTAIKDYNIRKGDLHRKHRGLMQWGAARKVAWIGRSTENEAKKFKQKLAGKLKHEQRDGGMEKEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g513 ### # start gene g514 Scaffold_2 AUGUSTUS gene 2429962 2430678 0.97 - . g514 Scaffold_2 AUGUSTUS transcript 2429962 2430678 0.97 - . g514.t1 Scaffold_2 AUGUSTUS stop_codon 2429962 2429964 . - 0 transcript_id "g514.t1"; gene_id "g514"; Scaffold_2 AUGUSTUS CDS 2429962 2430678 0.97 - 0 transcript_id "g514.t1"; gene_id "g514"; Scaffold_2 AUGUSTUS start_codon 2430676 2430678 . - 0 transcript_id "g514.t1"; gene_id "g514"; # protein sequence = [MGRKYCIVSHPSELNAQEKLKLQLWDSGKSKALPLLQFVILEYLLSVDRFTADDNLGTIELPLFDIMNTSETCNRIGH # RQDRFLAEDGRSHWPGSLTWSVGYFFKTTLEQHMANKEGENVQDLKSDIAEEVKAKLREAETRKHSEKASEVEQQKKQDLREKTEEIVSGTPPTREWP # AGILSVRIEQITGVEVDNPRQSGSKGTKNGEDGVEEEEGDDMPSPYCTIIINHAKYTKQEQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g514 ### # start gene g515 Scaffold_2 AUGUSTUS gene 2430741 2432191 0.43 - . g515 Scaffold_2 AUGUSTUS transcript 2430741 2432191 0.43 - . g515.t1 Scaffold_2 AUGUSTUS stop_codon 2430741 2430743 . - 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_2 AUGUSTUS CDS 2430741 2431244 0.84 - 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_2 AUGUSTUS CDS 2431312 2431620 0.44 - 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_2 AUGUSTUS CDS 2431670 2432191 0.99 - 0 transcript_id "g515.t1"; gene_id "g515"; Scaffold_2 AUGUSTUS start_codon 2432189 2432191 . - 0 transcript_id "g515.t1"; gene_id "g515"; # protein sequence = [MPTPEKKNPQRDSDGERSGNSKATANGREVTDPITHFPVTIHDNTSIELEQIPPSRSDSKATEDMTTEETDQQRHTEM # ERVVWEETNKGWWEEPNHNRTRTALVVAISVSIGGYTTLIISKILPRISTRSTSGEGFGILDIYIGVVAYTLLAIAAGFLVLRYETKDENNNNQQEKP # WTKPSAQERPESAVWLNSFLDTLWPIVNPALFTAVSDMLEDSLQASLPKMIHAVRVADIGQGSEPLRILGIRWLDGADATQARPGMAAEEGDFVNFEV # CSSFWLTGGIVLPVWVDITGIISTARVRIHLTPNPPFLSLMTLTLMGQPKVKLTATPLAKNFLNVMDMPGLSGWLQKSIDAAISEYVAPHSLSVDLKT # VLMGREKMDTEARGVVWITVKSATGFKNGDGIEIWKSENGRKGDVYVTASWGKWGKPLWSTRSVDQYLIGVF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g515 ### # start gene g516 Scaffold_2 AUGUSTUS gene 2437111 2437869 0.95 - . g516 Scaffold_2 AUGUSTUS transcript 2437111 2437869 0.95 - . g516.t1 Scaffold_2 AUGUSTUS stop_codon 2437111 2437113 . - 0 transcript_id "g516.t1"; gene_id "g516"; Scaffold_2 AUGUSTUS CDS 2437111 2437869 0.95 - 0 transcript_id "g516.t1"; gene_id "g516"; Scaffold_2 AUGUSTUS start_codon 2437867 2437869 . - 0 transcript_id "g516.t1"; gene_id "g516"; # protein sequence = [MAGTFPQSIPRPFTSPGRTNSSTLSPAARFYGYQTDQTDQDNEDEVGLTTNNTAAHQSLAQQPAGSQGISRTTATEAS # STPSTDLGLPRNYTVSGLALQQQSSPYIQYLYGTLNRGQGYSTTNSARTSYTRVDTTAMGDSPDIEAGIEAQDGNGEGRTLSVSADIAAEGQIQAIPQ # APIVSVCFLMISGKRRVMTFEPETTVGRVKELVWNTWPSGPGRCFPSSSHTTNLIFLTSRLQEERPSTPPILGSCI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g516 ### # start gene g517 Scaffold_2 AUGUSTUS gene 2443360 2444694 0.28 + . g517 Scaffold_2 AUGUSTUS transcript 2443360 2444694 0.28 + . g517.t1 Scaffold_2 AUGUSTUS start_codon 2443360 2443362 . + 0 transcript_id "g517.t1"; gene_id "g517"; Scaffold_2 AUGUSTUS CDS 2443360 2443467 0.28 + 0 transcript_id "g517.t1"; gene_id "g517"; Scaffold_2 AUGUSTUS CDS 2443840 2444694 0.84 + 0 transcript_id "g517.t1"; gene_id "g517"; Scaffold_2 AUGUSTUS stop_codon 2444692 2444694 . + 0 transcript_id "g517.t1"; gene_id "g517"; # protein sequence = [MISEPQVSFRIPNTYYPSLTDRELSFSKAQGTVNVPDSPPDYEEIEGTDALHESTPISNTSSSSTATTPIPGPPVSLA # RPHSARAVTNNASKNSPANNISISHPFGSINCAYTVDPTLTLFPSSSRGTRIQSNVKLRTNVGSIDADLTLMHGAKEDNSTLPSATMDISSKMGTVNV # TLVSSYWEYALVTHPLITMQRRPSSALPTIRLFASSRAGSLSVRVPANFHGFITAYTKIGRLTLEPSLQSSAVVLKEEIKVKRVFIGDPNVLRGSADT # RLFQTRIRETKNGGWEGDRIVLRAPVGNIELDILKRDMPILRNTTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g517 ### # start gene g518 Scaffold_2 AUGUSTUS gene 2445244 2446304 0.68 + . g518 Scaffold_2 AUGUSTUS transcript 2445244 2446304 0.68 + . g518.t1 Scaffold_2 AUGUSTUS start_codon 2445244 2445246 . + 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_2 AUGUSTUS CDS 2445244 2445333 0.8 + 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_2 AUGUSTUS CDS 2445402 2445836 0.82 + 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_2 AUGUSTUS CDS 2445888 2446304 0.94 + 0 transcript_id "g518.t1"; gene_id "g518"; Scaffold_2 AUGUSTUS stop_codon 2446302 2446304 . + 0 transcript_id "g518.t1"; gene_id "g518"; # protein sequence = [MIIPTKELDDSEYNGKLDDDSPTETGTVRGVEPPPEYSPPNPNYPDKQKKSTYPDVASKPSDDLELKGVNFVYRHIYF # DSIYATYIIDPSVQDLSQSILPGASRDDRRSRSRTGPRKGKTSKNLCLQSECGAINVGVRVLDTEIAAMATEGKRSHRPRKVLLDVRTTFGPIDVRLR # LASLPPPPGLRVFPESTATRLPIKLSASSKCGPVHISLPASFYGFIFFSVPLGEIVLSTQVQKNVSWDRMFSRTITKNSGSRTVFVGDSEALRGRIEG # GSDGPDSADDRVDVDGPWNGDEVHLDAWCGSVLVDYVDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g518 ### # start gene g519 Scaffold_2 AUGUSTUS gene 2446672 2447355 0.55 + . g519 Scaffold_2 AUGUSTUS transcript 2446672 2447355 0.55 + . g519.t1 Scaffold_2 AUGUSTUS start_codon 2446672 2446674 . + 0 transcript_id "g519.t1"; gene_id "g519"; Scaffold_2 AUGUSTUS CDS 2446672 2446807 0.67 + 0 transcript_id "g519.t1"; gene_id "g519"; Scaffold_2 AUGUSTUS CDS 2446910 2447355 0.83 + 2 transcript_id "g519.t1"; gene_id "g519"; Scaffold_2 AUGUSTUS stop_codon 2447353 2447355 . + 0 transcript_id "g519.t1"; gene_id "g519"; # protein sequence = [MPPLSDVWLLLDNSQMTSSFSIGNWVTSLSGGAWLGSTAITIGSPGNTPSSSNSPTWFLVGIDLNSPYNVSFPNPGIL # QSYTQWYQTPTLPDGLHTVNLSSIVVNLDYAIITAGATTPLSGSTIVVDDESPEILYNGNGWKTSDSGIDIGGGWVNGLPLANTTHRTSNMGDGSVFN # LPASQNYAPNLKILTSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g519 ### # start gene g520 Scaffold_2 AUGUSTUS gene 2451037 2451354 0.25 - . g520 Scaffold_2 AUGUSTUS transcript 2451037 2451354 0.25 - . g520.t1 Scaffold_2 AUGUSTUS stop_codon 2451037 2451039 . - 0 transcript_id "g520.t1"; gene_id "g520"; Scaffold_2 AUGUSTUS CDS 2451037 2451354 0.25 - 0 transcript_id "g520.t1"; gene_id "g520"; Scaffold_2 AUGUSTUS start_codon 2451352 2451354 . - 0 transcript_id "g520.t1"; gene_id "g520"; # protein sequence = [MIGIEVYHEFMRPKWKTERNEIPITDLGAKVNWGLGSIKVAVVNEFKHTAYGSHDDLGFLNDVVTILLRHNMLYSMDQ # KGERLEALPEWDKYYNAMKAARASTTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g520 ### # start gene g521 Scaffold_2 AUGUSTUS gene 2462257 2463693 0.61 - . g521 Scaffold_2 AUGUSTUS transcript 2462257 2463693 0.61 - . g521.t1 Scaffold_2 AUGUSTUS stop_codon 2462257 2462259 . - 0 transcript_id "g521.t1"; gene_id "g521"; Scaffold_2 AUGUSTUS CDS 2462257 2462823 0.95 - 0 transcript_id "g521.t1"; gene_id "g521"; Scaffold_2 AUGUSTUS CDS 2462953 2463693 0.64 - 0 transcript_id "g521.t1"; gene_id "g521"; Scaffold_2 AUGUSTUS start_codon 2463691 2463693 . - 0 transcript_id "g521.t1"; gene_id "g521"; # protein sequence = [MSTRQFASPVTRGNFFYGSDFYVEVPGSGGFSKERFTRESSGSLYSLLTYTPPSGPVLTKAGKVAKRQPSPHRDRSGA # FYCAQLIHYGLKQYKTKEAAKKHLLQAFDADHQLKVPESILLVEKELKEEYDKANLEAGRLYEERRLLERERVRKEQEERSRKNAALMKQLKEISETK # VAGTDDSGAMVKRLSDKALRDAIKVMPEGDLRKIVAKVVKDVPELRDAVELQISRSQKTTQKANKGKSALKWSQFLPDELFTLKICKSMKSSHLWGKF # DFGGISGILRSTSSPLPESFPAGFKVEFLWRGEESGEGESSFGKDNKGYLVFLGDGRIKGHMHWMGEFDFAGKYDTEQSQNVVWVKSIPHWKSEWRSY # NQHNYDVANTARWGNWGGETRNEKAADSDTSAGKGSSGSDDEEDFDMEDDSDSGYQGRSNIAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g521 ### # start gene g522 Scaffold_2 AUGUSTUS gene 2465260 2465655 0.7 + . g522 Scaffold_2 AUGUSTUS transcript 2465260 2465655 0.7 + . g522.t1 Scaffold_2 AUGUSTUS start_codon 2465260 2465262 . + 0 transcript_id "g522.t1"; gene_id "g522"; Scaffold_2 AUGUSTUS CDS 2465260 2465655 0.7 + 0 transcript_id "g522.t1"; gene_id "g522"; Scaffold_2 AUGUSTUS stop_codon 2465653 2465655 . + 0 transcript_id "g522.t1"; gene_id "g522"; # protein sequence = [MCNSDSQDFNETKFTAQVKPQLTSRSGNVPETGPIDLEALEKDSANATLTFNVNHSAPAHILSSDSDHGTSRSYDAAD # DQQKSPNVYINGLPSHFPEEQLFELAAPFGEIRSVRSFTRHVGEKESGYGFVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g522 ### # start gene g523 Scaffold_2 AUGUSTUS gene 2466586 2468186 0.4 + . g523 Scaffold_2 AUGUSTUS transcript 2466586 2468186 0.4 + . g523.t1 Scaffold_2 AUGUSTUS start_codon 2466586 2466588 . + 0 transcript_id "g523.t1"; gene_id "g523"; Scaffold_2 AUGUSTUS CDS 2466586 2466648 0.44 + 0 transcript_id "g523.t1"; gene_id "g523"; Scaffold_2 AUGUSTUS CDS 2466756 2468186 0.55 + 0 transcript_id "g523.t1"; gene_id "g523"; Scaffold_2 AUGUSTUS stop_codon 2468184 2468186 . + 0 transcript_id "g523.t1"; gene_id "g523"; # protein sequence = [MELKKLLNVYMDEWSVDGTIPRSERVIREDDSASPARLTIAQAALLNLRGRDQLRNQQQTGVDAPLIGASRLVHGSAP # TANQVYNDFSSNAHDLSAAAAGAYRGSASDLTSAAQLLAGLNNGPRRGVNLSPYHQTSPLPNVLGQTNQDLTPAMAALLDSLRGNGAPWTGHDDRYTA # PQRQPHTFRNAHSAHSVLGDVDLNLTFTPEYQSRVGGGVAQTRSGYTPAEELILNAHAQRRKSVHIGGDEPSYHQHGQHVDDAGFNVGVRGYRTQAST # MAIQQQPSSYYLSSGNLPVVVESDGDQEAEHPPQSTRYPQSQLNGRSRQVRNSGPRERDIHNNFLSNNHNQQAHVRSTTLPPSSTPSTAAPRHYQHNS # MSVLKSRNITNDIMRTTSSQLQTTSSNQPQAHSKHRSMNSISSSILNNSKIHDDNIHNNTHLYSDASDIRIPDGGSSYTDMTSAHQQQHHYRHNYPTK # TAGDQDPPFGNNNLDSKKTHLTMGRME] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g523 ### # start gene g524 Scaffold_2 AUGUSTUS gene 2472605 2473932 0.18 - . g524 Scaffold_2 AUGUSTUS transcript 2472605 2473932 0.18 - . g524.t1 Scaffold_2 AUGUSTUS stop_codon 2472605 2472607 . - 0 transcript_id "g524.t1"; gene_id "g524"; Scaffold_2 AUGUSTUS CDS 2472605 2473322 0.47 - 1 transcript_id "g524.t1"; gene_id "g524"; Scaffold_2 AUGUSTUS CDS 2473394 2473932 0.19 - 0 transcript_id "g524.t1"; gene_id "g524"; Scaffold_2 AUGUSTUS start_codon 2473930 2473932 . - 0 transcript_id "g524.t1"; gene_id "g524"; # protein sequence = [MSIVAIGLVLALVNLLVAATTVLKPRVTLANSPVDPIDPFAFDPGFDIQSVAGLAISLPSHSWEFGTASEALLELWNP # SLSIFGPEPFQAAASLSRDPLVAMSVPSLVYAQAKIVLGTGANVLADGDGAVGDPASLGVSAVLLGKIAGNETLRDAAEREAEYLLMGAPRFWNGAIS # HRVEADFVYMAPPFLAYYAVETSNPLLLQQTVEQCGLYRQILQKNVSSATSYKGLWEHIIGPVNQDTGVWSTGNAWAAAGMTRVLATVLKAPSHITLT # WKDDVVSELTQWIKEILDGAIRGKDITLAPNGLLRNYLDDVSGDGHGFGETSGTALLASVSYRVVVLRPDIFYADGSDRTYIDWADGLRKTLAEHITA # NGTASPAVNPLNWSDTTQYTAGSPEGQNFVVLMYAAWRDCKIAEIC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g524 ### # start gene g525 Scaffold_2 AUGUSTUS gene 2478675 2479310 0.88 - . g525 Scaffold_2 AUGUSTUS transcript 2478675 2479310 0.88 - . g525.t1 Scaffold_2 AUGUSTUS stop_codon 2478675 2478677 . - 0 transcript_id "g525.t1"; gene_id "g525"; Scaffold_2 AUGUSTUS CDS 2478675 2479310 0.88 - 0 transcript_id "g525.t1"; gene_id "g525"; Scaffold_2 AUGUSTUS start_codon 2479308 2479310 . - 0 transcript_id "g525.t1"; gene_id "g525"; # protein sequence = [MPSLSDVWLLVDDTQMTSTFSGGNWMTAGPGFGPWLGNTSTFIGTPVGTLSSHSRVSTLQPTLIDVECFLLGTSISFT # GNTPSATNSPTWFLAGIDSNTPYNVSFPDVGTQIYTQWYQTPMLPDGLHIVNLSSIVVDLDYVVITAGSTTPFSGSTIVVDDRSPEIAYTGSGWTTSD # AELNFGGSYINGPPLGNTTHRTNNVGDGFVFPFAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g525 ### # start gene g526 Scaffold_2 AUGUSTUS gene 2484918 2486792 0.33 - . g526 Scaffold_2 AUGUSTUS transcript 2484918 2486792 0.33 - . g526.t1 Scaffold_2 AUGUSTUS stop_codon 2484918 2484920 . - 0 transcript_id "g526.t1"; gene_id "g526"; Scaffold_2 AUGUSTUS CDS 2484918 2486792 0.33 - 0 transcript_id "g526.t1"; gene_id "g526"; Scaffold_2 AUGUSTUS start_codon 2486790 2486792 . - 0 transcript_id "g526.t1"; gene_id "g526"; # protein sequence = [MPKRYVPASPATDLETGGSGIEHVSLSVSGMTCTGCETKLQRALAQIDSIKHLKTSLVLSRAEFDLDLSIGTLEDVMK # RLERATEFKCEKITDQGASIDVITPINAVDFVKQDWPLGVTDMKITSKTSACVHYDPKVVGARNLIERGWAMPLKLAPLLADPNLEAGRKHVRHFGYM # TLLSVALTIPVLVLAWAPLPKKDIAYGSVSLALATIVQIVIAGPFYTKALKSLVFSRVIEMDLLIVLSTSAAYIFSIISFTFLASGNPLSTGEFFETS # TLLVTLIMVGRYVAALSRQKAVQSISVYSLQTPTALIVDEQGVSEREIDTRLLQYGDFLKIIPDSRVPTDGTVISGFSTIDESMITGESKPVEKSVKF # SVIAGSINNSGTLIARITRLPNENTISTIANMVDEAKLSKPQIQEIADRVASWFVPVVMVFTIITFAIWIAVGMVVQGRSGNEAAIQAITYAITVLII # SCPCAIGLAVPMVIVITSGVAAEHGVVFKSAQSIEIAHKAAHVVFDKTGTLTEGKLIVAAEEYMAEEQGVTASLLLGLVGSIKHPVSIAVATHLQAKS # GIVTNVSDIVSVVGKGVEGMSPSGQVLRAGNSHWPEFRPTRYIHPLAWPLSVLLHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g526 ### # start gene g527 Scaffold_2 AUGUSTUS gene 2488172 2489495 0.57 - . g527 Scaffold_2 AUGUSTUS transcript 2488172 2489495 0.57 - . g527.t1 Scaffold_2 AUGUSTUS stop_codon 2488172 2488174 . - 0 transcript_id "g527.t1"; gene_id "g527"; Scaffold_2 AUGUSTUS CDS 2488172 2489202 0.9 - 2 transcript_id "g527.t1"; gene_id "g527"; Scaffold_2 AUGUSTUS CDS 2489345 2489495 0.57 - 0 transcript_id "g527.t1"; gene_id "g527"; Scaffold_2 AUGUSTUS start_codon 2489493 2489495 . - 0 transcript_id "g527.t1"; gene_id "g527"; # protein sequence = [MAPLWPYAVGAQAGVDGSSPVSIDMQDHTHTSDGGSEDVASAVLWGMDGLIQDSSSTTASSSSSSSSSSSSSSSSSSS # SATSASSASKISSTSHTGVIVGAIAGGIVIAFIVIAFAVCLTRRRRNQTNRPFITGAAGAEAFVGGARRTSRKFGGKSYASAAPDSPIMVSVPLGSPG # SFGNNANQNPNTTSYYSQGSSSTTSAAYQNDHPRNAMSSFPGYSQPVPGSQYGEGLQLYGQPDKGSHRNSQYGSDRPYSSYNPWNSSSAMASGVAAAA # TGGAHVGASLPHNGVANGSGNMADSYGAFGGPNPHTDSFLAAPGQIVLSYGGAASDSGVSYFHPIFPSSRLRILSQAGSSSSRSDVYTTKPLTSAAEK # RRLALAHREEEQEEEAPPSYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g527 ### # start gene g528 Scaffold_2 AUGUSTUS gene 2493685 2494402 0.44 - . g528 Scaffold_2 AUGUSTUS transcript 2493685 2494402 0.44 - . g528.t1 Scaffold_2 AUGUSTUS stop_codon 2493685 2493687 . - 0 transcript_id "g528.t1"; gene_id "g528"; Scaffold_2 AUGUSTUS CDS 2493685 2494215 0.91 - 0 transcript_id "g528.t1"; gene_id "g528"; Scaffold_2 AUGUSTUS CDS 2494355 2494402 0.44 - 0 transcript_id "g528.t1"; gene_id "g528"; Scaffold_2 AUGUSTUS start_codon 2494400 2494402 . - 0 transcript_id "g528.t1"; gene_id "g528"; # protein sequence = [MSSLTPKEVRKTARAADVDLVVLNNRKYDAEDLKQILVDEDDRFYFVASVNPDATYQVLWFRLGPGRSCKVDILTTGK # STSLNIPRVPVTRVLYIHPYDDLPVMPLLALLLLKLQGWTDHRHSQKSHEQKRVRQDVADIKEMLKIAVEEQVHIDDQESKWMPRLFVEQMSDRVDEY # VRKFPESLNDWENLGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g528 ### # start gene g529 Scaffold_2 AUGUSTUS gene 2494879 2496294 0.44 - . g529 Scaffold_2 AUGUSTUS transcript 2494879 2496294 0.44 - . g529.t1 Scaffold_2 AUGUSTUS stop_codon 2494879 2494881 . - 0 transcript_id "g529.t1"; gene_id "g529"; Scaffold_2 AUGUSTUS CDS 2494879 2496294 0.44 - 0 transcript_id "g529.t1"; gene_id "g529"; Scaffold_2 AUGUSTUS start_codon 2496292 2496294 . - 0 transcript_id "g529.t1"; gene_id "g529"; # protein sequence = [MDKDAATRWTVAMVDEVAWGVGWGDEGDSVPVTDEELRQETTVSFNSRSQSRPHVSLSSTSPIAEVESDVPCSAVSDA # SARRSASRAQRSLSRAPVSARSRSLSKRSEIGRRRYPSPPTSAVESSIHSIRSSSTHSSISSAGPLEPDYAPLLSPSPLRGIEEEKRGRRLKKSSHIT # SMSRSPSPSVLPSTPSDVNPPRFISPPPLEERAEGSRASTSSIPRGRLRFPRIAPSHQSKSGTHTPLEQRTTPDVFSAEDEPEWHISSVEDGLLQANE # MAASMAMDQDYLTSSESYFQRNISPPPIQSESRPLFHHRPGSIIQTKSEGHRRSTFADLALETSVIEVPENVADREPRRGHVSSSLERSHHTSHHHFH # HPYNLKKQMRAGSTPPAPLSSLLDDGHTSTLRFSEHKSHSHSASHTPFSVYSHSHSSSRTSFGLLASEQTGPIRAMPVSAMVTPVVVTGVNVTSAAED # V] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g529 ### # start gene g530 Scaffold_2 AUGUSTUS gene 2496760 2497623 0.93 - . g530 Scaffold_2 AUGUSTUS transcript 2496760 2497623 0.93 - . g530.t1 Scaffold_2 AUGUSTUS stop_codon 2496760 2496762 . - 0 transcript_id "g530.t1"; gene_id "g530"; Scaffold_2 AUGUSTUS CDS 2496760 2497623 0.93 - 0 transcript_id "g530.t1"; gene_id "g530"; Scaffold_2 AUGUSTUS start_codon 2497621 2497623 . - 0 transcript_id "g530.t1"; gene_id "g530"; # protein sequence = [MYTVPAQSILGRFFSNPGVHAEKFSDVPTGRPRIHIVEGDSSSKSVRGIESIYSASGTQQTLYDDPPLSASLPQSFPS # NSAVSPAAMFLSGFSASPSTLSLPDDEGEAVADYILGPIIGYGGFSIVRRASSISGGVVAIKIVRRSDLSKQGNITRAQKRLDHETHIWSSLNHEHIL # PLFTSMHNSYADFFVTLYCPAGSLFDILKREGRPALQQDDAGMMFRQLVRGTRYLHEDARIVHCDMKLENVLVDESGTCKITDFGMAKEIGEAIEADE # EEERKIGKMRVAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g530 ### # start gene g531 Scaffold_2 AUGUSTUS gene 2517217 2517624 0.77 - . g531 Scaffold_2 AUGUSTUS transcript 2517217 2517624 0.77 - . g531.t1 Scaffold_2 AUGUSTUS stop_codon 2517217 2517219 . - 0 transcript_id "g531.t1"; gene_id "g531"; Scaffold_2 AUGUSTUS CDS 2517217 2517624 0.77 - 0 transcript_id "g531.t1"; gene_id "g531"; Scaffold_2 AUGUSTUS start_codon 2517622 2517624 . - 0 transcript_id "g531.t1"; gene_id "g531"; # protein sequence = [MQSLTWCGNQSNANPSFRDNLEFLQWIKRFWDTNYGGQGYDPVSRRKGVADIPATVGPLSTGGSRTGGLNVGGSRAGG # RTPVSGHRSGSAQPNEAVQHLTAQLKEMSGHFEGLEKERDFYFEKVPQFDLSPSTRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g531 ### # start gene g532 Scaffold_2 AUGUSTUS gene 2519731 2520769 0.26 - . g532 Scaffold_2 AUGUSTUS transcript 2519731 2520769 0.26 - . g532.t1 Scaffold_2 AUGUSTUS stop_codon 2519731 2519733 . - 0 transcript_id "g532.t1"; gene_id "g532"; Scaffold_2 AUGUSTUS CDS 2519731 2520512 0.3 - 2 transcript_id "g532.t1"; gene_id "g532"; Scaffold_2 AUGUSTUS CDS 2520583 2520769 0.43 - 0 transcript_id "g532.t1"; gene_id "g532"; Scaffold_2 AUGUSTUS start_codon 2520767 2520769 . - 0 transcript_id "g532.t1"; gene_id "g532"; # protein sequence = [MFDCKTKWIWSIGYATRDDTTYPADLASYGSSEGERRFNFITKKYKKLGDVMRHFALLPDYHGTSWYIRKQLSYQSQV # VSGPGWVTIGDGIGFTNPLLSPGINAGMASSTFAADLTLASLKAKSEEERLAVWKKYDDYCDGAVPSLHLMNQVSDDTSSPKVLCTQCVFELQFLYLT # FMHPMLGPRVGFLWTIVIGHALPKYSLPRSAFTVDMKNFAEYATHWLWGSQVWDMPLPDFFVASRSRCCSKVDDWVKVAEYTKAKLMPLNLDEPVPQE # IVDDVINFSEKVKDEALAAGKYQGFPFRYEGELRNFGPKLVRHVVSAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g532 ### # start gene g533 Scaffold_2 AUGUSTUS gene 2528586 2529200 0.63 - . g533 Scaffold_2 AUGUSTUS transcript 2528586 2529200 0.63 - . g533.t1 Scaffold_2 AUGUSTUS stop_codon 2528586 2528588 . - 0 transcript_id "g533.t1"; gene_id "g533"; Scaffold_2 AUGUSTUS CDS 2528586 2529200 0.63 - 0 transcript_id "g533.t1"; gene_id "g533"; Scaffold_2 AUGUSTUS start_codon 2529198 2529200 . - 0 transcript_id "g533.t1"; gene_id "g533"; # protein sequence = [MDVPLTPPSTPPMSPSTISPTPPPPSPSLPPRFSHSNPPPSWTHHARLLIDKTQRGSEAKLRTFYRGGWRGLDVDMKA # TTKDIYMNLKNSIPHDESEIDSPNSSASPISSNSSDTDTNSSDYPSSPGTPSTPPTPITPFDESDLTLPTPLTSPKLATQTQPSPPKWWDLATATGTN # TRADKTRKTRLEVCRRLVGGMEGVREMC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g533 ### # start gene g534 Scaffold_2 AUGUSTUS gene 2542294 2543421 1 + . g534 Scaffold_2 AUGUSTUS transcript 2542294 2543421 1 + . g534.t1 Scaffold_2 AUGUSTUS start_codon 2542294 2542296 . + 0 transcript_id "g534.t1"; gene_id "g534"; Scaffold_2 AUGUSTUS CDS 2542294 2543421 1 + 0 transcript_id "g534.t1"; gene_id "g534"; Scaffold_2 AUGUSTUS stop_codon 2543419 2543421 . + 0 transcript_id "g534.t1"; gene_id "g534"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGSTDPLTVRQQEKLPERRVSPAI # SEQSRTSSRRLPTPPVQSLNLPPPRRGSSLSSLLKSPAMNTPNWERTHAIHHSRTNFPVQPLSEMTLRLEDVIRIQECIPEDVAMVLREVLESMGIEV # LGDGLEFSDLRVQFLTVGTQEIDLPEKAQQWLMTPRESIRFSLAVQRPVGPREDVGTVRGRGTLRTIVPKLEGNTSPPPSYPWKGEGILWRSRATYIV # PSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g534 ### # start gene g535 Scaffold_2 AUGUSTUS gene 2546790 2548146 0.5 + . g535 Scaffold_2 AUGUSTUS transcript 2546790 2548146 0.5 + . g535.t1 Scaffold_2 AUGUSTUS start_codon 2546790 2546792 . + 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_2 AUGUSTUS CDS 2546790 2547728 0.53 + 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_2 AUGUSTUS CDS 2547895 2548146 0.9 + 0 transcript_id "g535.t1"; gene_id "g535"; Scaffold_2 AUGUSTUS stop_codon 2548144 2548146 . + 0 transcript_id "g535.t1"; gene_id "g535"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVLNNSEAPLRAPRTRVKLEEVKDEEYEASQPGP # HKLFPSDKDLGPDDPILMGINEWLAFASESTEEEVEEILEAGRSAMEKVTPKPTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYPDLP # TLDIESLNIPKIPSRSGLTPKGSIRRNNFRRKQLIAGTHQRHEGVQQPKDPESGDPSSEQGGVVKELDKEESKRQETEELKKSIPVQYQDYLDVFSPG # EARTLPPTDPTISKSRQKGMRYLP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g535 ### # start gene g536 Scaffold_2 AUGUSTUS gene 2555453 2556766 0.7 - . g536 Scaffold_2 AUGUSTUS transcript 2555453 2556766 0.7 - . g536.t1 Scaffold_2 AUGUSTUS stop_codon 2555453 2555455 . - 0 transcript_id "g536.t1"; gene_id "g536"; Scaffold_2 AUGUSTUS CDS 2555453 2556766 0.7 - 0 transcript_id "g536.t1"; gene_id "g536"; Scaffold_2 AUGUSTUS start_codon 2556764 2556766 . - 0 transcript_id "g536.t1"; gene_id "g536"; # protein sequence = [MVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISS # PVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGVFATTRGLFEPKVMFFGLTNSPAMFQAL # MNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQVEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGF # LGFANFYRHFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPNRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQ # PAERNYEIYDREMLAIIEALKDWRNFLEGLLNHSTSLRTIRTSSSGALHKTSPADKRRWALYLTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g536 ### # start gene g537 Scaffold_2 AUGUSTUS gene 2569234 2569849 0.47 + . g537 Scaffold_2 AUGUSTUS transcript 2569234 2569849 0.47 + . g537.t1 Scaffold_2 AUGUSTUS start_codon 2569234 2569236 . + 0 transcript_id "g537.t1"; gene_id "g537"; Scaffold_2 AUGUSTUS CDS 2569234 2569291 0.47 + 0 transcript_id "g537.t1"; gene_id "g537"; Scaffold_2 AUGUSTUS CDS 2569374 2569849 0.54 + 2 transcript_id "g537.t1"; gene_id "g537"; Scaffold_2 AUGUSTUS stop_codon 2569847 2569849 . + 0 transcript_id "g537.t1"; gene_id "g537"; # protein sequence = [MDFPDNLSLIEDHNLLPTSYTIAEHPNQPSFEVGQPIWLSVNNLKIRHKSEKLGSRRLGPFEVINKTGAPWKGNEVNG # ILPAPPELEVIDGEEFYNVDRILDSRIHGWWKKLQYLVRRKAYDEGHDTWENEENVVGSSDEAINKFYAAHPNAPRKISATIFYSLPWQPVVNFTEVN # N] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g537 ### # start gene g538 Scaffold_2 AUGUSTUS gene 2581827 2583446 0.6 - . g538 Scaffold_2 AUGUSTUS transcript 2581827 2583446 0.6 - . g538.t1 Scaffold_2 AUGUSTUS stop_codon 2581827 2581829 . - 0 transcript_id "g538.t1"; gene_id "g538"; Scaffold_2 AUGUSTUS CDS 2581827 2583446 0.6 - 0 transcript_id "g538.t1"; gene_id "g538"; Scaffold_2 AUGUSTUS start_codon 2583444 2583446 . - 0 transcript_id "g538.t1"; gene_id "g538"; # protein sequence = [MHTRTPAVAMASAYASKVSGGHTDSFLGGEVIKMNETLDGPKQQDSTSSFSNSQTSPTRDITTKSGVTTKEWSKGGGV # VGVGTEPRIYYSTALTKSLHRETSLSTPATSQVPVTQLIPSHEGKSVLSNSSSLVFPSHNTSPTSLLITTNHSPQLNLLSETLTLATVSHLGRSAPTK # GSNSINGDSKKKADSLPLLIMPGNRPATSQYPNASSAPLRNIQTSTVNSYPSNLTPIHSVLRPHCPARERLTKWCPASKRVLRDTTGHSLDLSDEFAE # HIQSVLTAGFAESTLETYASGLLAFHVFCDSREIPELQRAPCSLDLLQSWIATMAGHYAGTSVKNYIYGVRAWHIIHGIEWKIDKAPIDTMIQGAERL # QPERSKRKKRLPFTISYIESILTGLDPNDPFDAACGGCLTTSFYCAARVGELTVPNLKDFSANNHAYGTPSQVHETSDRNGFKTTILHIPRTKSNQSD # GEDIYFSKQLGSSDPDRWFQNQLRVNNPGPSDHLFAYKHLSGRHISLRPLTKSAFIRRIQKIAQRGVFQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g538 ### # start gene g539 Scaffold_2 AUGUSTUS gene 2585481 2586464 0.97 - . g539 Scaffold_2 AUGUSTUS transcript 2585481 2586464 0.97 - . g539.t1 Scaffold_2 AUGUSTUS stop_codon 2585481 2585483 . - 0 transcript_id "g539.t1"; gene_id "g539"; Scaffold_2 AUGUSTUS CDS 2585481 2586464 0.97 - 0 transcript_id "g539.t1"; gene_id "g539"; Scaffold_2 AUGUSTUS start_codon 2586462 2586464 . - 0 transcript_id "g539.t1"; gene_id "g539"; # protein sequence = [MANRIDFDPAKIPCPDFSNNLYDVIRNALIADANSPDITNNEQAILKLRSQWETENANLRAQYQVQLQEEHAAGEQRR # ADEEESTRQREVEEREKEVELAKEREKKRTPLPNFKQGVGHRSVPHHYHPYAEKLMTARKYVPLWYFLPDAEREARERMREVVDNNRFEFESDPAMAS # NASLTLVSTTSVRASPNAIPDLRLTWNQVMRAKSGFLGALSLGAFPDIHVDMFARFFANMEMHPELRKTNGERTMAFYQAETRLSWYKDNEKGDPFDL # AVIMEETLDECRNEIRSQDHAKALKGMSSLLPLPINSLLIITPYQFSPFRNRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g539 ### # start gene g540 Scaffold_2 AUGUSTUS gene 2586711 2587664 0.37 - . g540 Scaffold_2 AUGUSTUS transcript 2586711 2587664 0.37 - . g540.t1 Scaffold_2 AUGUSTUS stop_codon 2586711 2586713 . - 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_2 AUGUSTUS CDS 2586711 2587664 0.37 - 0 transcript_id "g540.t1"; gene_id "g540"; Scaffold_2 AUGUSTUS start_codon 2587662 2587664 . - 0 transcript_id "g540.t1"; gene_id "g540"; # protein sequence = [MDAISRTKEDLGKEKRGEIVPGGIGANEGSGSVDKADKRVEWEGGPGIEEGAVLALEAGADVVMICHTFEKQRAAVER # VWAAVESGRISLDVLRESTKRIAKWKKALGLEWDLYAERMGWNQNAWDQLKGKNAALSLAAYKRTAVCLKEGEMLDGRGKVVVFTPAMESYNLAVDDA # EGVLRTKGGAVRNTAGASFLSFVEAIRQQVPNTRHVVFNQQDTESVYVVESDEQVIFTLRNADRGTWQLRGLERTLCSTQTKVVVVSSGTPYDLIGFQ # SKHSIDYAHLACSEYTKPALEAVKNIIFGEEKAVGKLPVRVTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g540 ### # start gene g541 Scaffold_2 AUGUSTUS gene 2590513 2592292 0.08 + . g541 Scaffold_2 AUGUSTUS transcript 2590513 2592292 0.08 + . g541.t1 Scaffold_2 AUGUSTUS start_codon 2590513 2590515 . + 0 transcript_id "g541.t1"; gene_id "g541"; Scaffold_2 AUGUSTUS CDS 2590513 2590849 0.61 + 0 transcript_id "g541.t1"; gene_id "g541"; Scaffold_2 AUGUSTUS CDS 2590955 2591188 0.27 + 2 transcript_id "g541.t1"; gene_id "g541"; Scaffold_2 AUGUSTUS CDS 2591425 2591837 0.29 + 2 transcript_id "g541.t1"; gene_id "g541"; Scaffold_2 AUGUSTUS CDS 2591930 2592292 0.74 + 0 transcript_id "g541.t1"; gene_id "g541"; Scaffold_2 AUGUSTUS stop_codon 2592290 2592292 . + 0 transcript_id "g541.t1"; gene_id "g541"; # protein sequence = [MSDALLNAFTDSSMQSLSNFELTLGSLPSDFSTPPRPGLRVPSATSQTTAQSSAAVTTPPPATLSFRRKGESSLSRKL # TAENEVEGNLETPSAEKSRWGDAGLDTPSPHVPRRHSHYCLQHIDSLKKENFDIKLRVHFLEERLAELAPEQMDAALKQNITLKIETHNRGREIKRLK # KLLLELERELERLQRNTSSAGDAHRIDELESDLDQLKQTITEQAQLLDQKEDDKVDLLDEIEALRLNIENLQQRREVESIERSESRAQMLEEREEREA # VEDDLNALKDRLAAALIELQQKEDDIERKDQMLEDMTSQHQQIVGEVEEEWRGEVLAERDAECKELRITVTELEATMNDLHGKFEATLAHLEQEADDK # DAQIESLNEAIEKLSEQVYILEDENDKFKEDHDKMKEEDDAERERLETLAAALKEVRPVNLTLDGVVNTRTFAEID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g541 ### # start gene g542 Scaffold_2 AUGUSTUS gene 2595299 2596122 0.29 + . g542 Scaffold_2 AUGUSTUS transcript 2595299 2596122 0.29 + . g542.t1 Scaffold_2 AUGUSTUS start_codon 2595299 2595301 . + 0 transcript_id "g542.t1"; gene_id "g542"; Scaffold_2 AUGUSTUS CDS 2595299 2595539 0.47 + 0 transcript_id "g542.t1"; gene_id "g542"; Scaffold_2 AUGUSTUS CDS 2595659 2595821 0.64 + 2 transcript_id "g542.t1"; gene_id "g542"; Scaffold_2 AUGUSTUS CDS 2595930 2596122 0.9 + 1 transcript_id "g542.t1"; gene_id "g542"; Scaffold_2 AUGUSTUS stop_codon 2596120 2596122 . + 0 transcript_id "g542.t1"; gene_id "g542"; # protein sequence = [MRRLRSESAAQRQKAAAAEKQARNTKTDSSAKSRGKPGKAKAVVESEDEEDEEMSVSEEEEADADADGDEEKTSMWRA # RYYEIKSVPVAEVDSDGEDDDVPRSPLKPRLKIKLKLPIVPASSTSNTATPFLRNRNNIADMESSSSEIESEDGESELVEDEEDEEDDDMQVSVDNSS # VTAHTLQTFKIALNDYATSCFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g542 ### # start gene g543 Scaffold_2 AUGUSTUS gene 2598035 2598322 0.97 - . g543 Scaffold_2 AUGUSTUS transcript 2598035 2598322 0.97 - . g543.t1 Scaffold_2 AUGUSTUS stop_codon 2598035 2598037 . - 0 transcript_id "g543.t1"; gene_id "g543"; Scaffold_2 AUGUSTUS CDS 2598035 2598322 0.97 - 0 transcript_id "g543.t1"; gene_id "g543"; Scaffold_2 AUGUSTUS start_codon 2598320 2598322 . - 0 transcript_id "g543.t1"; gene_id "g543"; # protein sequence = [MDHSSSGTGTGESVGGSALDVVRDRDLVDGFNSLHVDKGRAAWAGRIPVDDSSDEEVLTPIKPSAKALGKRRVEVNDA # TESESLLLFCVVVVSRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g543 ### # start gene g544 Scaffold_2 AUGUSTUS gene 2599666 2600283 0.44 - . g544 Scaffold_2 AUGUSTUS transcript 2599666 2600283 0.44 - . g544.t1 Scaffold_2 AUGUSTUS stop_codon 2599666 2599668 . - 0 transcript_id "g544.t1"; gene_id "g544"; Scaffold_2 AUGUSTUS CDS 2599666 2600283 0.44 - 0 transcript_id "g544.t1"; gene_id "g544"; Scaffold_2 AUGUSTUS start_codon 2600281 2600283 . - 0 transcript_id "g544.t1"; gene_id "g544"; # protein sequence = [MPLRKSKSFSSKHNATVTTSAPPFDLPPPLISPIPKPNRSHAKHPSFRSALRSILGLNRTKTIANLDSADLDAKFIHN # STTASSASHVVSWRKHTMTYSSSMHDSPRPYRCMEPPDVLPIINIGFDDSINYTDVAHEHEHSTMSSTTTSSRSTTTTTDPTSIDAESNVPSFDLSHT # EKDAGFRGLWKKVKPADKPDEVSRLMKNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g544 ### # start gene g545 Scaffold_2 AUGUSTUS gene 2601289 2602257 1 - . g545 Scaffold_2 AUGUSTUS transcript 2601289 2602257 1 - . g545.t1 Scaffold_2 AUGUSTUS stop_codon 2601289 2601291 . - 0 transcript_id "g545.t1"; gene_id "g545"; Scaffold_2 AUGUSTUS CDS 2601289 2602257 1 - 0 transcript_id "g545.t1"; gene_id "g545"; Scaffold_2 AUGUSTUS start_codon 2602255 2602257 . - 0 transcript_id "g545.t1"; gene_id "g545"; # protein sequence = [MKKFFGTSSKSKTKGINYTDDATPPNTPGLQTPIHSAHAVYQQQPAQPGNFRNIHSGFLPSRPSSVFDPDQSLEDLAY # EPPPPIPVSRTSSVGSIQGALPAGHLPPGASPPNSNIPSSPSIPPANNSATIRKKQPPRDNPGGSVPTPKQAPGVHGILKALEPTGTIPHLPPAPQHN # HQYNPSSSDLHHIPPSGRDTPSSYMQHNNSDDPQHKDKSLKWSLFSRNNSHVDDVKDKDRRREEKTVLSAREQEARPQEKEIREEKERHWQFVDREDR # KDREPLRKEERTVDRDRESAELTRMIGWRFHLLSYMLSISYPQIGQAT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g545 ### # start gene g546 Scaffold_2 AUGUSTUS gene 2603965 2605153 0.31 - . g546 Scaffold_2 AUGUSTUS transcript 2603965 2605153 0.31 - . g546.t1 Scaffold_2 AUGUSTUS stop_codon 2603965 2603967 . - 0 transcript_id "g546.t1"; gene_id "g546"; Scaffold_2 AUGUSTUS CDS 2603965 2605026 0.84 - 0 transcript_id "g546.t1"; gene_id "g546"; Scaffold_2 AUGUSTUS CDS 2605100 2605153 0.36 - 0 transcript_id "g546.t1"; gene_id "g546"; Scaffold_2 AUGUSTUS start_codon 2605151 2605153 . - 0 transcript_id "g546.t1"; gene_id "g546"; # protein sequence = [MRLSSPLPSDELASSEPQESLRPLSNPLPAVQVNGQPDADQTLEDVKSDETDALLSPTDTNENSVDSEHYRVNQRHSY # ASSSQISLASGGTAPSAGSIVSLTMFPNPPSSLIPIPRTSTPTNNGTETALGSPKSAISFYSTPNRTSESPTLPSSPTPSTAKSKNFLGRLPSLKKRG # KRADTDPLPPLPRITTQLTPSGRSATLPIPIPVSPVSPRTPTIATPTIITPIPPSTDIPVTMSTIPNTPTTPRMPSTPSTPRYSQFVQTQPRTAVSTT # DRWDDDLPTQRWETRRVSSMTTSALSVSSSIRGVDWNHGNSNGNGSENSGPSSPRTPVPDTPTMVLTDSEKKHVRMWIRQCPTLRRVVFISGAEWGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g546 ### # start gene g547 Scaffold_2 AUGUSTUS gene 2610362 2611024 0.79 + . g547 Scaffold_2 AUGUSTUS transcript 2610362 2611024 0.79 + . g547.t1 Scaffold_2 AUGUSTUS start_codon 2610362 2610364 . + 0 transcript_id "g547.t1"; gene_id "g547"; Scaffold_2 AUGUSTUS CDS 2610362 2611024 0.79 + 0 transcript_id "g547.t1"; gene_id "g547"; Scaffold_2 AUGUSTUS stop_codon 2611022 2611024 . + 0 transcript_id "g547.t1"; gene_id "g547"; # protein sequence = [MAQPRSQRDQNRSNTGNANANSSVINNPINNSFENRMSQTNIPFIPQQQNPMSNMMFQRSMGQIPMMGPGIPMMNVNP # MGMMGMNMQSFNPMASMMSGGGMGTSGGAGMGGVGGMNMMGGMNGMGGVGGINALNAMNAMGNPGAMRLGMGPIGATGGMNQSTMMGGSGMGGVGGMM # QMRQGANMGAGLVMPFGRMTTNAAGPGPMRMHSRGQHNFHPYAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g547 ### # start gene g548 Scaffold_2 AUGUSTUS gene 2611215 2611967 0.43 - . g548 Scaffold_2 AUGUSTUS transcript 2611215 2611967 0.43 - . g548.t1 Scaffold_2 AUGUSTUS stop_codon 2611215 2611217 . - 0 transcript_id "g548.t1"; gene_id "g548"; Scaffold_2 AUGUSTUS CDS 2611215 2611967 0.43 - 0 transcript_id "g548.t1"; gene_id "g548"; Scaffold_2 AUGUSTUS start_codon 2611965 2611967 . - 0 transcript_id "g548.t1"; gene_id "g548"; # protein sequence = [MAWSFTAAGFDAIDVHMSDILSGKLSLSGFHGLAACGGFSYGDVLGAGKGWAHSVLLNAQARKEFIDFFTRVDTFTLA # VCNGCQFLSHLRSIIPGAQDWPDFKSNRSERFEGRVSMVEVVDTVHTRSSVFLREMLGSKLPVANAHGEGRVSFSDSTHQQTFLDQNLVCLQFVDSNG # RPTEAYPLNPNGSPAGITGIQTSDGRVLALMPHPERVTMLESNSWYPRSLREQWNGVGPWFKLFQSARSWCDDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g548 ### # start gene g549 Scaffold_2 AUGUSTUS gene 2612062 2613771 0.85 - . g549 Scaffold_2 AUGUSTUS transcript 2612062 2613771 0.85 - . g549.t1 Scaffold_2 AUGUSTUS stop_codon 2612062 2612064 . - 0 transcript_id "g549.t1"; gene_id "g549"; Scaffold_2 AUGUSTUS CDS 2612062 2613771 0.85 - 0 transcript_id "g549.t1"; gene_id "g549"; Scaffold_2 AUGUSTUS start_codon 2613769 2613771 . - 0 transcript_id "g549.t1"; gene_id "g549"; # protein sequence = [MQRRCQQVIDACVALGGEVGDGNPIQSIHDVGAGGLSNALPELVHDSNLGATFEIRDVLIADSSMSPMEIWCNESQER # YVLALHPEKVTLFEELANRERCPFAIVGIATQNEELVVTDRLLGEDVIRLHMDMLFGKPPKIQKSDRSRTWGGDFFDTSLAKYLATPNSAAVATAVNR # ILRLPSVGSKSFLITIGDRSITGLVTRDQMVGPWQVPVADVAVTRSSYGFATVSGEAMALGERTPLALVSPAASARMAVAESLTNLAAACVGEISNVK # LSANWMCAASKEGEGAGLYEAVQAVGIDLCPKLGIGIPVGKDSMSMSMKWKEGNEQKDISSPLSLIVTAFGCVQDVAATWTPMLQSNIDEPTILVFLD # LAHGKQRLGGSALAQVFREIGQESPDVEDASVLKAFFQACQQMRTKEPEVILAYHDRSDGGLFTTLAEMSFAGRVGVEVSLNALNDSSDPIAALFNEE # LGAVVQVRQSHLPKLMSVFLESGFPTTSIHTLGHVNSAATDQSFKIVHDSEYIFNSTRQELQQMWSETSFKMQELRDNPITAREEFDLIADQSNSRHF # L] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g549 ### # start gene g550 Scaffold_2 AUGUSTUS gene 2621067 2621309 0.42 - . g550 Scaffold_2 AUGUSTUS transcript 2621067 2621309 0.42 - . g550.t1 Scaffold_2 AUGUSTUS stop_codon 2621067 2621069 . - 0 transcript_id "g550.t1"; gene_id "g550"; Scaffold_2 AUGUSTUS CDS 2621067 2621309 0.42 - 0 transcript_id "g550.t1"; gene_id "g550"; Scaffold_2 AUGUSTUS start_codon 2621307 2621309 . - 0 transcript_id "g550.t1"; gene_id "g550"; # protein sequence = [MQKPLIQEIMTQDASDPISQAGLEVVKPKSILRTPSSNPAQTAAHRDIGAKIDVTWSWYRTDDDRLQIQIEVPPVVRL # CD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g550 ### # start gene g551 Scaffold_2 AUGUSTUS gene 2624474 2625952 0.93 - . g551 Scaffold_2 AUGUSTUS transcript 2624474 2625952 0.93 - . g551.t1 Scaffold_2 AUGUSTUS stop_codon 2624474 2624476 . - 0 transcript_id "g551.t1"; gene_id "g551"; Scaffold_2 AUGUSTUS CDS 2624474 2625952 0.93 - 0 transcript_id "g551.t1"; gene_id "g551"; Scaffold_2 AUGUSTUS start_codon 2625950 2625952 . - 0 transcript_id "g551.t1"; gene_id "g551"; # protein sequence = [MAPIFAGSLQPKKKSDLQSLASALNISTEGTKEEVQTRIKMYLDKNQSELAEDPQFSGLYDRRRRRKESALPPGLVHL # LSRTSSNIANLTLSSSNRFTMDSGSERSHNAPPVAPLGPVYESTPVKDLSDVSAFLKNPPLSPSESDGRASPSRRRTTRSSLAITDAPHNIPPSPTSP # EASSIVDQSLFDRTIIEHIPTPRFGSMLQVVKRKQEAVAQSTHKTLYNVRTVSRCPYPQISGTLNRNPQLLSNSHTIWSISVLVQLLYISVSIIPWRF # LHIPFSATSIPASLDIPPSTVIPQSTSPQWNFISITIPYPPLATFESNMFWIILLHWFIPTVLIPVVAGILISFRPLSSTPPRVILSESREVSRTVRT # EEEKAETTNVDSEQTRLVPPFDPLTASIVQLAAQVAYTFPAVHRPFSLSSNSSPLIKSVDILGFKWRVLSASVVVALSFAEALGIAGSFESSHTGIKY # QNFTSQRSLHGAVDTIEESEVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g551 ### # start gene g552 Scaffold_2 AUGUSTUS gene 2632247 2632636 0.58 - . g552 Scaffold_2 AUGUSTUS transcript 2632247 2632636 0.58 - . g552.t1 Scaffold_2 AUGUSTUS stop_codon 2632247 2632249 . - 0 transcript_id "g552.t1"; gene_id "g552"; Scaffold_2 AUGUSTUS CDS 2632247 2632636 0.58 - 0 transcript_id "g552.t1"; gene_id "g552"; Scaffold_2 AUGUSTUS start_codon 2632634 2632636 . - 0 transcript_id "g552.t1"; gene_id "g552"; # protein sequence = [MQLSNIEIKTVDGFEGREKEVIIFSTVRNNSGGYIGFLADRRRLNVGLTRAKRGLFVVGSMNTLRQGRTARSNDGATK # VGKGAESWRRYMEYVGQHGLVLNLQPGDALAKVLHGNVNAAAAAAIAAVSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g552 ### # start gene g553 Scaffold_2 AUGUSTUS gene 2634229 2634762 0.78 - . g553 Scaffold_2 AUGUSTUS transcript 2634229 2634762 0.78 - . g553.t1 Scaffold_2 AUGUSTUS stop_codon 2634229 2634231 . - 0 transcript_id "g553.t1"; gene_id "g553"; Scaffold_2 AUGUSTUS CDS 2634229 2634762 0.78 - 0 transcript_id "g553.t1"; gene_id "g553"; Scaffold_2 AUGUSTUS start_codon 2634760 2634762 . - 0 transcript_id "g553.t1"; gene_id "g553"; # protein sequence = [MRTAIDSFKFDVRKQEQTGIFLPPSGSEGQREREYILMGTHLRDVLLQSSQPSESPHAHRALQDAEDPNYVERDVLEH # EYHPDHLSLPTGGFQELPPSLGDNHGAFHDDMLISSWANRYSHPNPVVIEGDPQFEELSRMNETQKRAMAMMIGERISLVQGVGLLSLITTLFLSTFS # Y] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g553 ### # start gene g554 Scaffold_2 AUGUSTUS gene 2637097 2638341 1 - . g554 Scaffold_2 AUGUSTUS transcript 2637097 2638341 1 - . g554.t1 Scaffold_2 AUGUSTUS stop_codon 2637097 2637099 . - 0 transcript_id "g554.t1"; gene_id "g554"; Scaffold_2 AUGUSTUS CDS 2637097 2638341 1 - 0 transcript_id "g554.t1"; gene_id "g554"; Scaffold_2 AUGUSTUS start_codon 2638339 2638341 . - 0 transcript_id "g554.t1"; gene_id "g554"; # protein sequence = [MGSPPKPWERAGGAVSSSSAPSIPTPTPSVLSTSTAVANPNPSPSLSIPERPTNSPSTATTTTALASNASPYSYGTSP # YSRMGTYGGYGSYGGGLSSYGGYGGYGGGGLGSYGGMGGIGGGYGGYGGLGMGYGAGMYGGGYGMGGMMGPNGIPVDANGNPLPPSLTQTLEHTTQHT # FALLHSIVQTFSGVAQMLESTFMATHSSFFAMVGVVDQFGHLRNALGSVLGLFGLIRWMKELLTGKKSSSGGLPGEFRQFVNGGPVQGPSGPPPPRPS # KKPLIIFLLAIFGVPYAMNKLIKTLAARAEAQAASGNPIAGQLDPSLPPLDPSSLTFARALYPFTATNSSELSLAENEIVALMAKWDQARGMEVDPRV # DLQGGIDAEWWRGRTREGREGWFPRKWVEVLQRKPVPQKVVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g554 ### # start gene g555 Scaffold_2 AUGUSTUS gene 2639252 2639761 0.48 + . g555 Scaffold_2 AUGUSTUS transcript 2639252 2639761 0.48 + . g555.t1 Scaffold_2 AUGUSTUS start_codon 2639252 2639254 . + 0 transcript_id "g555.t1"; gene_id "g555"; Scaffold_2 AUGUSTUS CDS 2639252 2639761 0.48 + 0 transcript_id "g555.t1"; gene_id "g555"; Scaffold_2 AUGUSTUS stop_codon 2639759 2639761 . + 0 transcript_id "g555.t1"; gene_id "g555"; # protein sequence = [MMRNVTVFFDKKMSQEVPADSIGDEFAGYIFRITGGNDKQGFPMKQGVLLPYRTRLLLSDGHSCYRPRRTGERKRKSV # RGCIVGPDIAVLSVVIVKQGEQEIPGLTDTVLPKRLGPKRATKIRRFFNLSKEDDVRKYVVRREVVSKKKEGAKPYTKAYVAVSFALGKFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g555 ### # start gene g556 Scaffold_2 AUGUSTUS gene 2640522 2640827 0.92 + . g556 Scaffold_2 AUGUSTUS transcript 2640522 2640827 0.92 + . g556.t1 Scaffold_2 AUGUSTUS start_codon 2640522 2640524 . + 0 transcript_id "g556.t1"; gene_id "g556"; Scaffold_2 AUGUSTUS CDS 2640522 2640827 0.92 + 0 transcript_id "g556.t1"; gene_id "g556"; Scaffold_2 AUGUSTUS stop_codon 2640825 2640827 . + 0 transcript_id "g556.t1"; gene_id "g556"; # protein sequence = [MNKILQSASTGEINVTNDGATILKAIQLDNAAAKILVNISKVQDDEIGDGTTSVCVLAAELLREAEKLIAMKIHPQTI # VEGYRIASLAALKALEGAAIDHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g556 ### # start gene g557 Scaffold_2 AUGUSTUS gene 2641318 2642164 0.56 + . g557 Scaffold_2 AUGUSTUS transcript 2641318 2642164 0.56 + . g557.t1 Scaffold_2 AUGUSTUS start_codon 2641318 2641320 . + 0 transcript_id "g557.t1"; gene_id "g557"; Scaffold_2 AUGUSTUS CDS 2641318 2641713 0.56 + 0 transcript_id "g557.t1"; gene_id "g557"; Scaffold_2 AUGUSTUS CDS 2641766 2642164 0.98 + 0 transcript_id "g557.t1"; gene_id "g557"; Scaffold_2 AUGUSTUS stop_codon 2642162 2642164 . + 0 transcript_id "g557.t1"; gene_id "g557"; # protein sequence = [MDTDKIKIFGAQVKVDGTGKLAELERAERVRILNILYSSIMPSPKQEKMKAKVDAIASHGINCFVNRQLIYNYPESLL # AEKGILVIEHADFEGVERLSLVTGGEIASTFDRPDLIKLGECELIEEVIIGEDKLIKFSGVAAGEACTVVLRGSTSQMVDEAERSLHDALSVLSQTVK # ETRTVLGGGCSEMLMSCAVDEEARKVKGKKAIAAEAFGRALRQMPTILADNAGYDSSDLVAKLRAAHYEGQSDAGLGDHHHVASPEFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g557 ### # start gene g558 Scaffold_2 AUGUSTUS gene 2645556 2646380 0.61 + . g558 Scaffold_2 AUGUSTUS transcript 2645556 2646380 0.61 + . g558.t1 Scaffold_2 AUGUSTUS start_codon 2645556 2645558 . + 0 transcript_id "g558.t1"; gene_id "g558"; Scaffold_2 AUGUSTUS CDS 2645556 2645811 0.94 + 0 transcript_id "g558.t1"; gene_id "g558"; Scaffold_2 AUGUSTUS CDS 2645932 2646380 0.64 + 2 transcript_id "g558.t1"; gene_id "g558"; Scaffold_2 AUGUSTUS stop_codon 2646378 2646380 . + 0 transcript_id "g558.t1"; gene_id "g558"; # protein sequence = [MPLKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPCQSPRVPPPHFDLDAGDHNDQDPPVDPDDPGANNDNDNLDDDSGGLPRGEPGDPSGPGGPGGPRSPISPDIPNKQRAMLELLSGFKGSIETL # GTVLATLAGLPDSSESKSKVKELTRPCLQVNNYRGSEVGYGLDMARDKLRGPELSIGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g558 ### # start gene g559 Scaffold_2 AUGUSTUS gene 2646748 2647723 0.69 + . g559 Scaffold_2 AUGUSTUS transcript 2646748 2647723 0.69 + . g559.t1 Scaffold_2 AUGUSTUS start_codon 2646748 2646750 . + 0 transcript_id "g559.t1"; gene_id "g559"; Scaffold_2 AUGUSTUS CDS 2646748 2646773 0.69 + 0 transcript_id "g559.t1"; gene_id "g559"; Scaffold_2 AUGUSTUS CDS 2646889 2647723 0.96 + 1 transcript_id "g559.t1"; gene_id "g559"; Scaffold_2 AUGUSTUS stop_codon 2647721 2647723 . + 0 transcript_id "g559.t1"; gene_id "g559"; # protein sequence = [MTEARGIRRGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNSGVYDAQGEAEDSLGNLKMKKTKNIQFNTLAAS # TNWDSAALKWAYGRGLAERIKDKMACLPKPATLADYCQEVLCIDNRYWKRKETRKREAGKPFIAWNPKKGSSDFKTGSTNQQNNPQPSGSSALFTPKP # KPFSGGKPNNGKPQNSSNSGQSSGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGSKHQIADCKSKRPENRRAVLLKLKKAPKQRLRLLKRNRKTSP # QLLFPGTKRELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g559 ### # start gene g560 Scaffold_2 AUGUSTUS gene 2648158 2648646 0.8 + . g560 Scaffold_2 AUGUSTUS transcript 2648158 2648646 0.8 + . g560.t1 Scaffold_2 AUGUSTUS start_codon 2648158 2648160 . + 0 transcript_id "g560.t1"; gene_id "g560"; Scaffold_2 AUGUSTUS CDS 2648158 2648646 0.8 + 0 transcript_id "g560.t1"; gene_id "g560"; Scaffold_2 AUGUSTUS stop_codon 2648644 2648646 . + 0 transcript_id "g560.t1"; gene_id "g560"; # protein sequence = [MFHNTSHSDSPQMSVPSATNTVDAKVAVLLLEPLLSVSPTILETPPGDHLALAPAPALRRYGPSPSHLNSPLNPSILT # LWSLNLLLNWKLPRSTLHWSVLQSLTGLARTLVWNLSFVLFHSEVAARTSTAPTVPPLHHSIPEEYTEFADVFDKIAADSLPEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g560 ### # start gene g561 Scaffold_2 AUGUSTUS gene 2651817 2652268 0.41 - . g561 Scaffold_2 AUGUSTUS transcript 2651817 2652268 0.41 - . g561.t1 Scaffold_2 AUGUSTUS stop_codon 2651817 2651819 . - 0 transcript_id "g561.t1"; gene_id "g561"; Scaffold_2 AUGUSTUS CDS 2651817 2652168 0.75 - 1 transcript_id "g561.t1"; gene_id "g561"; Scaffold_2 AUGUSTUS CDS 2652243 2652268 0.42 - 0 transcript_id "g561.t1"; gene_id "g561"; Scaffold_2 AUGUSTUS start_codon 2652266 2652268 . - 0 transcript_id "g561.t1"; gene_id "g561"; # protein sequence = [MSVSTLYTNMLNKFAYNNAPNASTGITPFFANKGYHPNITVRPEVNMKSDLARDFVVNLDELHVFLREEILLAQSRYK # EQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSKKYLGPFKVIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g561 ### # start gene g562 Scaffold_2 AUGUSTUS gene 2662865 2666714 0.1 + . g562 Scaffold_2 AUGUSTUS transcript 2662865 2666714 0.1 + . g562.t1 Scaffold_2 AUGUSTUS start_codon 2662865 2662867 . + 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2662865 2664207 0.55 + 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2664335 2664359 0.65 + 1 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2664455 2664465 0.33 + 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2664525 2664555 0.59 + 1 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2664743 2665309 0.31 + 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2665387 2665754 0.58 + 0 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS CDS 2665796 2666714 0.71 + 1 transcript_id "g562.t1"; gene_id "g562"; Scaffold_2 AUGUSTUS stop_codon 2666712 2666714 . + 0 transcript_id "g562.t1"; gene_id "g562"; # protein sequence = [MISRPQHLRSPLIRLRSLLISPYSGPKHFHPLPTQISLDKGKGRAQPAQSTSYIASRPSPELRSVRIRPRTLQERLQV # IPEAGTAPQVTGSEHREASIALSTHSHHSSHQIPLQDRISAAPTPPDALEQVRLTAEALGQVVEQYRNNELSPNDAFRALRSLTDDPTVVRDFIGQIQ # EIQRDHLRASRERVAAAKAARVAAAAASKSRISDGPLVSTEKAVNEAAWALMERELAENALQLAAAEAEADQMEQDAHQDRSNSLQQALLKLVGQTQS # SSSPGTSSGLPPSLLEAAPHLSALTSSDILSPTVSETWKLRMLFTVDSHVDTTVSLLSAQPFTDPLPQSLLKLIVKDRYVDFEKIHASITSYTSIFDD # STTFGSEYKLVKKEHSIRSLPVTSEAQWLRVFDAWLAPVLKIYPLLKETALVEVETHWSALQLTQTVCHPAQVQRIRNTCLFGLLSYDITRSDDALCN # KTSDFCCLRNFSVLENVPAPLLALLLLQSARILLVSFGMKGNALPHVQIAASMASVVSVESPTKQLTPNPAMRSLSTVDQRVKTALAGPRSLAGTKRA # APESNSGSSNSIPRFRRGYLWSTSSSSSEIIPPSIQSTYTAPPLPSPPEHLLNNPQIQSTLKAMAPYIKVETPFNVDRLESLLASHPNQPFKLDNYVS # EPQDFAALRAHRDQEVAAGRWSEALPEDFVLLPGMKVSPMFVVWQKGKPRVVMDHTGSGLNDNIPKAEGKVKYDDMHTFGQVLNDILKEHPDEELILF # KSDVSKAFLNLPGHPLWHPTFGVWNQDFTPLLVQPLISNVWFGSEKLGIIGLHVYMDDFYGWDFKRNLLLFHDQLRPKRQVQLLVFWDMILCPYEDKK # QEHGVTLKIIGFWVDIVKGSISLSSESIQGLVADITSFLSSPKRQAALRDWQHLAGSLNWSLNVLPWARPALTEMYRKMSGKTLQFRAIPINGEVYRD # LTWFSDLLQTAIGIRFVDAQRWHDSEADFVGWTDASNIGLSYVYAGNGFCYQLHPTEGSPVVDIFFRELLSILCLFHHIASKPSPPQHVLIYSDSLDS # VQVLTHFPLESLLTTPFSWPLLPLFSRLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g562 ### # start gene g563 Scaffold_2 AUGUSTUS gene 2667158 2667868 0.74 + . g563 Scaffold_2 AUGUSTUS transcript 2667158 2667868 0.74 + . g563.t1 Scaffold_2 AUGUSTUS start_codon 2667158 2667160 . + 0 transcript_id "g563.t1"; gene_id "g563"; Scaffold_2 AUGUSTUS CDS 2667158 2667868 0.74 + 0 transcript_id "g563.t1"; gene_id "g563"; Scaffold_2 AUGUSTUS stop_codon 2667866 2667868 . + 0 transcript_id "g563.t1"; gene_id "g563"; # protein sequence = [MSIPTLMNLVPILLYKLQSVVPRRSELTLSKGSHHSALHTFNSSLNLKPSLNHLLFATLISCCFYGCHRVGELTFPNQ # KSLRDWRKVIKRSTLKFEAGRAGYHLPYHKGDPFYQGTDILFCSQQVADPVTLLKEYATARDKLHGARPALFILEDGNVPTRGWFDSMFFAVLSKEFG # GHSGRAGGATFYAGLGLQEMIIMALGRWSSSAWKIYIRDNPAVRAELELAAIRRHQSSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g563 ### # start gene g564 Scaffold_2 AUGUSTUS gene 2678530 2679558 0.48 - . g564 Scaffold_2 AUGUSTUS transcript 2678530 2679558 0.48 - . g564.t1 Scaffold_2 AUGUSTUS stop_codon 2678530 2678532 . - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_2 AUGUSTUS CDS 2678530 2678990 0.79 - 2 transcript_id "g564.t1"; gene_id "g564"; Scaffold_2 AUGUSTUS CDS 2679082 2679421 0.62 - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_2 AUGUSTUS CDS 2679520 2679558 0.62 - 0 transcript_id "g564.t1"; gene_id "g564"; Scaffold_2 AUGUSTUS start_codon 2679556 2679558 . - 0 transcript_id "g564.t1"; gene_id "g564"; # protein sequence = [MDFNRFISVTSGLQWGIPPDHRSQALVSVPFHPYYSFLLIQSLQDPSKFEQFPAIPIPFCLRFREGSAMMRLVPSKDL # DVFASLRGKGSLAVALKISTPSPPLEIKPLTSVSKAPVAPPRLIRRNGIASPRSTRSKDSDNKLLSGSPLVDVAPQASLSAKASVGRKDPKSKTTVKV # VEDSKASNPTPSGIAYKRVRLPPRSRKNTSIVSKGKARQVVVSDEDSTSNEVESEDKDEDEEVAPPPKHLKTTTSISGKTLFFIFRLILLIQFDCSFT # ALSFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g564 ### # start gene g565 Scaffold_2 AUGUSTUS gene 2682770 2683790 0.41 + . g565 Scaffold_2 AUGUSTUS transcript 2682770 2683790 0.41 + . g565.t1 Scaffold_2 AUGUSTUS start_codon 2682770 2682772 . + 0 transcript_id "g565.t1"; gene_id "g565"; Scaffold_2 AUGUSTUS CDS 2682770 2683383 0.65 + 0 transcript_id "g565.t1"; gene_id "g565"; Scaffold_2 AUGUSTUS CDS 2683481 2683790 0.42 + 1 transcript_id "g565.t1"; gene_id "g565"; Scaffold_2 AUGUSTUS stop_codon 2683788 2683790 . + 0 transcript_id "g565.t1"; gene_id "g565"; # protein sequence = [MIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPKFDPKGIDEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIP # PSGPSNQSNRFERNTTPRSSNGTQWACFLCKST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g565 ### # start gene g566 Scaffold_2 AUGUSTUS gene 2684008 2687715 0.05 + . g566 Scaffold_2 AUGUSTUS transcript 2684008 2687715 0.05 + . g566.t1 Scaffold_2 AUGUSTUS start_codon 2684008 2684010 . + 0 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2684008 2684956 0.23 + 0 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2685056 2685574 0.26 + 2 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2685689 2685929 0.4 + 2 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2686022 2686211 0.86 + 1 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2686355 2686733 0.62 + 0 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS CDS 2686880 2687715 0.84 + 2 transcript_id "g566.t1"; gene_id "g566"; Scaffold_2 AUGUSTUS stop_codon 2687713 2687715 . + 0 transcript_id "g566.t1"; gene_id "g566"; # protein sequence = [MDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKKISTPMKEQDRSMRTLRSNAVAPEESEKAKR # NQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIEDVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYR # PIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELAALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETE # ILDDPSRVQMIDTCIRIEDLWQDQADMFEVLTESRNDILWIYNHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWD # PEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQI # NTSRYNEPKNVTPDNEKSTDGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLNNDQFNLNPI # KSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESSKDLNRQDRSPINLIDETNKQVDNEAIGVEKPINLNTEE # VFTKYKPVDKKVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPRIYEP # SNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARSFSGRSCGGTLDLYVGYDERELDQLSRDMTTFQTPYGPHRLVKLPMGWTN # SVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRFVWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCT # YEGSMPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKETND] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g566 ### # start gene g567 Scaffold_2 AUGUSTUS gene 2688651 2689977 0.24 - . g567 Scaffold_2 AUGUSTUS transcript 2688651 2689977 0.24 - . g567.t1 Scaffold_2 AUGUSTUS stop_codon 2688651 2688653 . - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_2 AUGUSTUS CDS 2688651 2688955 0.84 - 2 transcript_id "g567.t1"; gene_id "g567"; Scaffold_2 AUGUSTUS CDS 2689037 2689172 0.91 - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_2 AUGUSTUS CDS 2689810 2689977 0.55 - 0 transcript_id "g567.t1"; gene_id "g567"; Scaffold_2 AUGUSTUS start_codon 2689975 2689977 . - 0 transcript_id "g567.t1"; gene_id "g567"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKS # RQDSGSDSSASDASFASAQRFSHHWF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g567 ### # start gene g568 Scaffold_2 AUGUSTUS gene 2696124 2696905 0.25 - . g568 Scaffold_2 AUGUSTUS transcript 2696124 2696905 0.25 - . g568.t1 Scaffold_2 AUGUSTUS stop_codon 2696124 2696126 . - 0 transcript_id "g568.t1"; gene_id "g568"; Scaffold_2 AUGUSTUS CDS 2696124 2696578 0.54 - 2 transcript_id "g568.t1"; gene_id "g568"; Scaffold_2 AUGUSTUS CDS 2696686 2696905 0.5 - 0 transcript_id "g568.t1"; gene_id "g568"; Scaffold_2 AUGUSTUS start_codon 2696903 2696905 . - 0 transcript_id "g568.t1"; gene_id "g568"; # protein sequence = [MPPKTRAQSRANSEENTFFTTSQSFAPFSKSISAIGQPRRHNRGFGPATVPTTSTLPEAMEEDQQLEYSTLYTAIAHR # TGKQPQHCAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNHDDLDDNSGGLPCGEPGDPSGPGRPGGPGGPGGPGGPGGPRSPISPDIPNKQR # AMLELLSVTSLPRFCVKEKGRNLMGTPTNQSNTQYVSSLLSNLFNSKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g568 ### # start gene g569 Scaffold_2 AUGUSTUS gene 2705217 2706875 0.45 + . g569 Scaffold_2 AUGUSTUS transcript 2705217 2706875 0.45 + . g569.t1 Scaffold_2 AUGUSTUS start_codon 2705217 2705219 . + 0 transcript_id "g569.t1"; gene_id "g569"; Scaffold_2 AUGUSTUS CDS 2705217 2705477 0.45 + 0 transcript_id "g569.t1"; gene_id "g569"; Scaffold_2 AUGUSTUS CDS 2705565 2706875 0.83 + 0 transcript_id "g569.t1"; gene_id "g569"; Scaffold_2 AUGUSTUS stop_codon 2706873 2706875 . + 0 transcript_id "g569.t1"; gene_id "g569"; # protein sequence = [MDGGAQKLLESVTIRTLHAQNFSRSSTQASLVLTDLLARYLTLLTSACAKYAEHAGRTRITAKDAVTALEELGVSVEE # LHEFGSTEGSLSYGQRFSAQLSDGLRADLDDAIPLHYAYVSPELAQVLEEEGEGGDDEDSLFAADDSSMAMDGSESFPSVSRLDLSLADPLSPSRKRQ # RTWDWNPPDHVPSFLPPFPSTSETSSTPHPPRIPPTELPPNPTEGAGINQPPSPPPITSTQPPQPPALTSTSAAASDYLVQVPYTQSTISNVSEWHLP # SAPPDSTSSSRPEPRWATPAIEPSLIAAYHHILTHPPPPNATHIANPQRHKVAMALLALTQSASRWELPDTLFSTLATNQPRVASIGPTYPVLIADHL # PAEGVKKGEKEFKFPATAPRSVATTERISQSVIQQGSRIPELARHVLPVRKHLTNPFEHESIDVPFLFQPTILSRTNRLTHPPPLTRNNKTLTYGAGI # PAPWNVNTIPPTTLLLILRKTLKLTGKMCRLLSYPMLDSSLHGTTNTRTFEHP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g569 ### # start gene g570 Scaffold_2 AUGUSTUS gene 2707458 2708030 0.62 - . g570 Scaffold_2 AUGUSTUS transcript 2707458 2708030 0.62 - . g570.t1 Scaffold_2 AUGUSTUS stop_codon 2707458 2707460 . - 0 transcript_id "g570.t1"; gene_id "g570"; Scaffold_2 AUGUSTUS CDS 2707458 2708030 0.62 - 0 transcript_id "g570.t1"; gene_id "g570"; Scaffold_2 AUGUSTUS start_codon 2708028 2708030 . - 0 transcript_id "g570.t1"; gene_id "g570"; # protein sequence = [MEVIVEANPRTLIQFVVQALVPTPNVTDELVAAMINSCTLSLLNAGSVPMRGVICAVSVARFSPPVKGGIPIYKVQST # EEPISRLEATGCFAFLFSDSVSSSTYASSCIWTNWHSSYSGSAKAVDEDDLVRARDVARSAAREVWDRMKLLIEERERPKIGMKGSLVKNASHEMADG # EKMDVEEDDAKMEI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g570 ### # start gene g571 Scaffold_2 AUGUSTUS gene 2708319 2708744 0.53 - . g571 Scaffold_2 AUGUSTUS transcript 2708319 2708744 0.53 - . g571.t1 Scaffold_2 AUGUSTUS stop_codon 2708319 2708321 . - 0 transcript_id "g571.t1"; gene_id "g571"; Scaffold_2 AUGUSTUS CDS 2708319 2708744 0.53 - 0 transcript_id "g571.t1"; gene_id "g571"; Scaffold_2 AUGUSTUS start_codon 2708742 2708744 . - 0 transcript_id "g571.t1"; gene_id "g571"; # protein sequence = [MISMLKDFNYEDADGGQRNSFAFLTCTNTLGNSLLFPEQVIETLATANELRDIEFAVPTAVGGLAGDAIHALSLGNVY # TFHRLLHEENHSGDGLRGISIFGVGGVTSPAALTRMRKAGASVVGVATLLGKEGVNAFELLSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g571 ### # start gene g572 Scaffold_2 AUGUSTUS gene 2710747 2711166 0.61 - . g572 Scaffold_2 AUGUSTUS transcript 2710747 2711166 0.61 - . g572.t1 Scaffold_2 AUGUSTUS stop_codon 2710747 2710749 . - 0 transcript_id "g572.t1"; gene_id "g572"; Scaffold_2 AUGUSTUS CDS 2710747 2711166 0.61 - 0 transcript_id "g572.t1"; gene_id "g572"; Scaffold_2 AUGUSTUS start_codon 2711164 2711166 . - 0 transcript_id "g572.t1"; gene_id "g572"; # protein sequence = [MGDATNTVLILAGELLKKSEQLLVLGLHPSEVIKGYELACTKALEELDSELCLHLQLGSLAYPSFSELSTFSLPSPLT # SSSLASALKPAIASKQYGFEDTLSALVAEAALAVMPPNPKNFNVDNVRVVKIMGGGLSASR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g572 ### # start gene g573 Scaffold_2 AUGUSTUS gene 2713376 2713926 0.26 + . g573 Scaffold_2 AUGUSTUS transcript 2713376 2713926 0.26 + . g573.t1 Scaffold_2 AUGUSTUS start_codon 2713376 2713378 . + 0 transcript_id "g573.t1"; gene_id "g573"; Scaffold_2 AUGUSTUS CDS 2713376 2713384 0.31 + 0 transcript_id "g573.t1"; gene_id "g573"; Scaffold_2 AUGUSTUS CDS 2713453 2713926 0.91 + 0 transcript_id "g573.t1"; gene_id "g573"; Scaffold_2 AUGUSTUS stop_codon 2713924 2713926 . + 0 transcript_id "g573.t1"; gene_id "g573"; # protein sequence = [MDNGTGVVTSVPSDSPDDFQTLTDLRKKADFYKIDPSWAAIDPVPVISTPTYGDLTAPAIVKQLKIQSQKDTKQLAEA # KEIAYKEGFYSGTMLVGEFKGQSVQEAKPKVRESMIQAGLAFAYAEPEGMVTSRSGDECIVALMDQWYLDYGEPMWRSQVEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g573 ### # start gene g574 Scaffold_2 AUGUSTUS gene 2714090 2715563 0.09 + . g574 Scaffold_2 AUGUSTUS transcript 2714090 2715563 0.09 + . g574.t1 Scaffold_2 AUGUSTUS start_codon 2714090 2714092 . + 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_2 AUGUSTUS CDS 2714090 2714177 0.36 + 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_2 AUGUSTUS CDS 2714228 2714682 0.21 + 2 transcript_id "g574.t1"; gene_id "g574"; Scaffold_2 AUGUSTUS CDS 2714764 2714876 0.49 + 0 transcript_id "g574.t1"; gene_id "g574"; Scaffold_2 AUGUSTUS CDS 2714939 2715563 0.45 + 1 transcript_id "g574.t1"; gene_id "g574"; Scaffold_2 AUGUSTUS stop_codon 2715561 2715563 . + 0 transcript_id "g574.t1"; gene_id "g574"; # protein sequence = [MPWDPQYLVESLSDSTIYMAYYTVSQLLHENSIDGSKPGPLGITADQMIDEVWEYVFCDGPWPSSASLPQEKADALKH # EFNYFYPFDIRSSGKDLINNHLSFALYNHVAIFPQDKWPISIRTNGHLMLNGAKMSKSTGNFLTLRDAVNKFGADACRLALAELVMVLKMLILMRRTE # TPTFCEMIKDEANLRHGPRNYHDEVFENEINDLINTTQTHYDALNFKDALKFGFYELQSARDWYREVTSDVGMHVDLVRYWIEISALLAAPIAPHFAE # HIYIEILKKPTSIQLARWPTPQKPVDRTRIEIGQYMRGTVKMIRDAETALVKMLNKNKGKGKGATASFDPKKPKSVRVYVATSFPAWQESCVQAVKAA # YDSEADKVDDAKVRALLTESGLIKNKLAMPFIQAFKVDCFFSISTNCLTIFNLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g574 ### # start gene g575 Scaffold_2 AUGUSTUS gene 2716017 2717405 0.87 - . g575 Scaffold_2 AUGUSTUS transcript 2716017 2717405 0.87 - . g575.t1 Scaffold_2 AUGUSTUS stop_codon 2716017 2716019 . - 0 transcript_id "g575.t1"; gene_id "g575"; Scaffold_2 AUGUSTUS CDS 2716017 2717405 0.87 - 0 transcript_id "g575.t1"; gene_id "g575"; Scaffold_2 AUGUSTUS start_codon 2717403 2717405 . - 0 transcript_id "g575.t1"; gene_id "g575"; # protein sequence = [MDIGTSQVSNYNSEISALSLTAHNRDPPVAKRVRILHLYPHFVKDALDTMDLSSSQSLLSKFGELAGLIRDQKKLILK # QKPRLPLKFKTCRDLMQVMMEIFSGLPNLTDYHILWCGLPSVGSDPALVLSSPLRLNLRCLRLEISLEKLQYVLSSFHNQSLPELEELDLFIRVEHLN # ADRYDNILLMLAHMISSLHSSLRKLTVQLWEPFDLSLLFAAISYLPLLDKLSLSIPMSFPNLGNPDGLIGFLNAHSNTLRTLSIRASELGGRSLMMHN # ELQLGAWMDQTFSKVHLACITKLEISLYLVPFESALICVRTFSNTLTSLVFTGSHLAYEDLDLLTAAFPPSCQKQALHHARIGPVTLSPQLIDLFAER # FPEMDKLELLVKSIVPSEGDVPLFCGRSNSDRDQDEGQVRRFIEEMKHRHYSDWKLRYLDLSSGSYPRLMNEEQFKSVFMQSIPALRTFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g575 ### # start gene g576 Scaffold_2 AUGUSTUS gene 2719299 2719874 0.51 - . g576 Scaffold_2 AUGUSTUS transcript 2719299 2719874 0.51 - . g576.t1 Scaffold_2 AUGUSTUS stop_codon 2719299 2719301 . - 0 transcript_id "g576.t1"; gene_id "g576"; Scaffold_2 AUGUSTUS CDS 2719299 2719782 0.93 - 1 transcript_id "g576.t1"; gene_id "g576"; Scaffold_2 AUGUSTUS CDS 2719831 2719874 0.51 - 0 transcript_id "g576.t1"; gene_id "g576"; Scaffold_2 AUGUSTUS start_codon 2719872 2719874 . - 0 transcript_id "g576.t1"; gene_id "g576"; # protein sequence = [MDAQLSSIAPRLTINPLPGHALAFFLFFIGLVGVLVHIISRRQRRGLYLSTPPGTIAATIALSAHSGFGELLMPTDDE # ETLERKLSGLRFSIDKRTGAIVATAASVSSSSRDSKRMSSKPEQDEMMQSLLGSEHKRPPNEVRMDSDLSASSSQAAFEAASTQVGYPPMRSPRGIY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g576 ### # start gene g577 Scaffold_2 AUGUSTUS gene 2719913 2721100 0.07 - . g577 Scaffold_2 AUGUSTUS transcript 2719913 2721100 0.07 - . g577.t1 Scaffold_2 AUGUSTUS stop_codon 2719913 2719915 . - 0 transcript_id "g577.t1"; gene_id "g577"; Scaffold_2 AUGUSTUS CDS 2719913 2720156 0.45 - 1 transcript_id "g577.t1"; gene_id "g577"; Scaffold_2 AUGUSTUS CDS 2720213 2720535 0.45 - 0 transcript_id "g577.t1"; gene_id "g577"; Scaffold_2 AUGUSTUS CDS 2721092 2721100 0.36 - 0 transcript_id "g577.t1"; gene_id "g577"; Scaffold_2 AUGUSTUS start_codon 2721098 2721100 . - 0 transcript_id "g577.t1"; gene_id "g577"; # protein sequence = [MRIYGVVNVPDTCSQLNITQRPVMFWYGCHLASTVVRCDINVLYKLRRFFHHAADGTPEARTVFCKPTLQLFNVEATA # NLNNQSVVGVLELDSNVPSNNVTGPFANSPFNGVIFENQTDPFIQARATATTNGVPGAMFRFAAQSPGGADAVFSADNSFLDITNTVYVRIVFLKAIA # QHEPLTKHDRRFIWQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g577 ### # start gene g578 Scaffold_2 AUGUSTUS gene 2722774 2723322 0.63 - . g578 Scaffold_2 AUGUSTUS transcript 2722774 2723322 0.63 - . g578.t1 Scaffold_2 AUGUSTUS stop_codon 2722774 2722776 . - 0 transcript_id "g578.t1"; gene_id "g578"; Scaffold_2 AUGUSTUS CDS 2722774 2723322 0.63 - 0 transcript_id "g578.t1"; gene_id "g578"; Scaffold_2 AUGUSTUS start_codon 2723320 2723322 . - 0 transcript_id "g578.t1"; gene_id "g578"; # protein sequence = [MPQSTKPKPILPSIPQPALDIPNPDPLSEMQGEPPQNTSIISTDSLLTSPFDSPSASIAWPIPTLASPLLPTATKSTA # IASGAFLENSKARHEAMSEQLVQMALQLRKNAQNFSEKLVEDKSIVEETQMKLDSNFGVMQKERVRLRDHKGKSGSTTCLVIFAVVAVTITFVFMVAL # LRLTRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g578 ### # start gene g579 Scaffold_2 AUGUSTUS gene 2724349 2724765 0.42 + . g579 Scaffold_2 AUGUSTUS transcript 2724349 2724765 0.42 + . g579.t1 Scaffold_2 AUGUSTUS start_codon 2724349 2724351 . + 0 transcript_id "g579.t1"; gene_id "g579"; Scaffold_2 AUGUSTUS CDS 2724349 2724765 0.42 + 0 transcript_id "g579.t1"; gene_id "g579"; Scaffold_2 AUGUSTUS stop_codon 2724763 2724765 . + 0 transcript_id "g579.t1"; gene_id "g579"; # protein sequence = [MLISMAKYARSLELRINHSTQATSSMTSNSTLVVSADSVSPESSTKISSESGLVSGSSDKEDSEGEQLMENFKTLSIG # PQQRHFGRSSTYMFLYGSMEINGKVKSHMPLEYDLKPELWATDIVSLPTFCAENLFQTPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g579 ### # start gene g580 Scaffold_2 AUGUSTUS gene 2726497 2726982 1 + . g580 Scaffold_2 AUGUSTUS transcript 2726497 2726982 1 + . g580.t1 Scaffold_2 AUGUSTUS start_codon 2726497 2726499 . + 0 transcript_id "g580.t1"; gene_id "g580"; Scaffold_2 AUGUSTUS CDS 2726497 2726982 1 + 0 transcript_id "g580.t1"; gene_id "g580"; Scaffold_2 AUGUSTUS stop_codon 2726980 2726982 . + 0 transcript_id "g580.t1"; gene_id "g580"; # protein sequence = [MKRSRPDDLEPDLDWPTAAQSHDIVPQNGFTNRDLRTLGNRVGVPAPSWNSIPLNHEPGVSNLITTLHDIPSTEPPST # LAGLEIWADRLQSSGSNASTTGSPNGNLTINAMASSGIYGVGVTPSANALAPHVVQNQTRPLDANEVKNGLYDGGTSLVSFIN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g580 ### # start gene g581 Scaffold_2 AUGUSTUS gene 2727897 2730850 0.26 - . g581 Scaffold_2 AUGUSTUS transcript 2727897 2730850 0.26 - . g581.t1 Scaffold_2 AUGUSTUS stop_codon 2727897 2727899 . - 0 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS CDS 2727897 2728592 0.97 - 0 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS CDS 2728722 2729164 0.91 - 2 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS CDS 2729239 2729555 0.75 - 1 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS CDS 2729617 2730243 0.81 - 1 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS CDS 2730402 2730850 0.39 - 0 transcript_id "g581.t1"; gene_id "g581"; Scaffold_2 AUGUSTUS start_codon 2730848 2730850 . - 0 transcript_id "g581.t1"; gene_id "g581"; # protein sequence = [MASYKSAIRSTTTNGQSEPKLKDKAQQLQEFFPSWSHEGDFLLIFFDFSARPQYHFLDLQSLLAEVNGDVELAATRIS # DGSSLTCLFCCFFHMVQYLTGKAEQWGSVSRKKDKKGGNTPKDSAPSPRGDFRGGRGGARGNRGGSAEWCCPWTDAAKPEESSASSAWGGPSAWGNTD # ADPDNALPAHVNGSTSGTSIQVASPLSAKQISKSPATSKLSWAQIARPQEKPAAPPAPVVQHPSPQPPVTAIHPPAPLESTTVNHLTSASTPVPAPSE # AEPTVSTGWEDPTTVENPSFDEEPSAPAAAPEPVKEPEQKSEPETVPALREITASKPPEITVHEQAAPSAPPTPAPSTPSKVATRDQGGVVMPPTPSS # IGANLSGISSFGSFGELKSAGVEKVGMQFGSLSLGGTSEPEPEPEIETVEASSTPAAQASMSAPEPISVAPPPPSTSLNSGLYQSQSQPIQTSCCFVP # ASPQTPSLAQLPQQLQQQAAQTQSQNLPSHHHYSQLGLPTHIDQSSQAQVQAQSSPQQVQQQQSYLRQNEQSSYGNNISAGVSSGFHHSPTPPMQDNN # GYGAFGSALSSQSLGGQGLGQGLSGMGQGTLGGMGGLGGEWNWVNFYDSYQPNTFGRGVLGHDDLKGSLPSQQQGQQAPSTVSTGTSTSLPPSVSSQS # SVPQSQQSPATSVSSQGQPQLGQGSAPAGYHPAAPLPTFYYQPFPPQNSYYGAAPSNYGYGVGGMGVPQPYGLGKYPTIYPVPPGSAPSPAGKPSPGM # GVHGPGGVISHSGIGVQPQSYGGGLYGQQQGYDDYQQHTQQQQQHHQQQGHQHHNSHGLGLGQDYSKQLYGVKAHYKVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g581 ### # start gene g582 Scaffold_2 AUGUSTUS gene 2735988 2736557 0.84 + . g582 Scaffold_2 AUGUSTUS transcript 2735988 2736557 0.84 + . g582.t1 Scaffold_2 AUGUSTUS start_codon 2735988 2735990 . + 0 transcript_id "g582.t1"; gene_id "g582"; Scaffold_2 AUGUSTUS CDS 2735988 2736557 0.84 + 0 transcript_id "g582.t1"; gene_id "g582"; Scaffold_2 AUGUSTUS stop_codon 2736555 2736557 . + 0 transcript_id "g582.t1"; gene_id "g582"; # protein sequence = [MHTPQAPAGELYSILFASSVFNPESHSPNSIPLLIDTRPLAIHTTFHIRHSVPIAIPSLILKRSRKPGFGPGGKSSQF # TSMHSLRQFVTTDHGRKVFDALLGIDEQQSVRKSSDERLWNGDVVVYDEDMDVKDRTNPSSTPLIGVIQSLLDAAASARPSIPTAMSAIQEDLSSAPE # EVRIGKADYLEGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g582 ### # start gene g583 Scaffold_2 AUGUSTUS gene 2740754 2741617 1 + . g583 Scaffold_2 AUGUSTUS transcript 2740754 2741617 1 + . g583.t1 Scaffold_2 AUGUSTUS start_codon 2740754 2740756 . + 0 transcript_id "g583.t1"; gene_id "g583"; Scaffold_2 AUGUSTUS CDS 2740754 2741617 1 + 0 transcript_id "g583.t1"; gene_id "g583"; Scaffold_2 AUGUSTUS stop_codon 2741615 2741617 . + 0 transcript_id "g583.t1"; gene_id "g583"; # protein sequence = [MDPPASIDHKEPARKTLPRKRSFGKYPSSKVTDSPAYDASEEDNDPTDVDDAASSVSVSAPSSSARARTLVAAGLLKP # SSNSNAHRKHHLASSFLSDSDGVDSPTYDGDIESSTTAGPESPHPHSSLRLGHHHSMSSHSTLNTPALPGSDTTTDYIETPITEGPSSAFPSTGQYHP # VFITPPSDPFPHPQNTISEPVVPSAIPTALSFNPAALRAEDIQMFVQRAIDGAPMEGSGTQRAYKVNRPPEDRPVRIYADGKFMLPHISVLFYLKNLF # AVSLPLYHIKYLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g583 ### # start gene g584 Scaffold_2 AUGUSTUS gene 2747170 2748917 0.34 + . g584 Scaffold_2 AUGUSTUS transcript 2747170 2748917 0.34 + . g584.t1 Scaffold_2 AUGUSTUS start_codon 2747170 2747172 . + 0 transcript_id "g584.t1"; gene_id "g584"; Scaffold_2 AUGUSTUS CDS 2747170 2748304 0.37 + 0 transcript_id "g584.t1"; gene_id "g584"; Scaffold_2 AUGUSTUS CDS 2748424 2748917 0.68 + 2 transcript_id "g584.t1"; gene_id "g584"; Scaffold_2 AUGUSTUS stop_codon 2748915 2748917 . + 0 transcript_id "g584.t1"; gene_id "g584"; # protein sequence = [MCNNSIRVLKFESDIFLSASSSKTPDALFTALNSSGLPDTASAHAFVNEVFQRAPRKHKHKKDSTHRQAEKEAKGLRT # QKFTYLLDDDGGTSSNQKQEKKEKRKSDKREKQIRKRDYDEREWESDEEEKARKKLRAEGDYKQEDVDLEAYEPEEDEEVRKERERLEDLKDRDAFAE # RVRERDKNRTKKVVEDRSSKLSGAAADAARRRQLADDSEARGAAMPSLRIHSRQEYLTKRELQQIELLRKEIADDEALFSGMKISKRERAELDRKKEL # LKLVEERMKINDKYDGYQLPEDYITEQGKIDKKKKENALYQRYEDAKPKDDQFVTDVDQWEASQTQHSTFKVGAMDKRELVDDYDYVLTRVRQYSSSW # KRHRRRTKTIEETRKSLPIYAWKEKLIEAVREHQVLIVVAETGSGKTTQIPQYLHEAGFTDGGMKVGCTQPRRVAAMSVAARVADEMGTKVGYEVGYS # IRFEDCTSDKTVLKYMTDGMLLREFLTEPDLASYSCLVIDEAHERTLNTDILFALVKVYTFSYSAFSWSQIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g584 ### # start gene g585 Scaffold_2 AUGUSTUS gene 2749377 2750020 0.5 + . g585 Scaffold_2 AUGUSTUS transcript 2749377 2750020 0.5 + . g585.t1 Scaffold_2 AUGUSTUS start_codon 2749377 2749379 . + 0 transcript_id "g585.t1"; gene_id "g585"; Scaffold_2 AUGUSTUS CDS 2749377 2749553 0.5 + 0 transcript_id "g585.t1"; gene_id "g585"; Scaffold_2 AUGUSTUS CDS 2749607 2750020 1 + 0 transcript_id "g585.t1"; gene_id "g585"; Scaffold_2 AUGUSTUS stop_codon 2750018 2750020 . + 0 transcript_id "g585.t1"; gene_id "g585"; # protein sequence = [MQAKIFEPTPEGARKVVLATNIAETSITIDGVVFVIDPGFVKQNSYNPRTGMSSLVVVPCSRASVNQRAGRAGRVGPG # KAFRLFTKWAFNNELQEDTVPEIQRTNLAMVVLLLKSLGINDLIGFEFIDPPPGETLMRALELLYALGALNDRGEMTKLGRRMAEFPVDPMLSKAIIS # SEQYQCTEEACIHRISQNRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g585 ### # start gene g586 Scaffold_2 AUGUSTUS gene 2760168 2761817 0.94 + . g586 Scaffold_2 AUGUSTUS transcript 2760168 2761817 0.94 + . g586.t1 Scaffold_2 AUGUSTUS start_codon 2760168 2760170 . + 0 transcript_id "g586.t1"; gene_id "g586"; Scaffold_2 AUGUSTUS CDS 2760168 2761817 0.94 + 0 transcript_id "g586.t1"; gene_id "g586"; Scaffold_2 AUGUSTUS stop_codon 2761815 2761817 . + 0 transcript_id "g586.t1"; gene_id "g586"; # protein sequence = [MRLRLQTSNTDGSKLPQLKVWFAFSAAGEEIPQKSITDLKKSICTTIKSFSNANITFRDIALGLDGFELLDELLAEEV # LRDGDLLVIKTREAYTVLGKKRKAEDDGSSEFIFHANCVLNLNILMQQLQGSGTDLCSQRLDLEMFHQFHLHVPLRNQTLLAQTQTLLLLTTLTLVPI # LLPPLTQTLRPTLRKYPLNQTHQNQQISSQFTLFSANLYLPVFRPAPPVQQTHVPPGLGSIKTRKRNIRRRSKKKHDALSGQGAEASTLVPSPPKRIS # GVNVAPLGSRANKSVSARATTAQQSADNVLIHDPLNLTMFSLGNKNKKKGYKYALAPPTSQKKVFSVPDSSDVLQEVEGESDVLNGPLPSSTTIFTSA # PENPLARQARVIPPSELQSLGKLPKNMFVTSVDVEEDLWNNSSSKKKKNKKQQLEHWEEDYTGTVREKPRDDEMQSTLDYGLAEEHLSYSNSETVLAV # NDLDAEDSKSMLIWSVVEQNFEAFPQVSLDSLQNGKLVAWKALALNLETYSPEVLLHIATVTAVSNDSSGGNSSFQFAV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g586 ### # start gene g587 Scaffold_2 AUGUSTUS gene 2762443 2764277 0.26 + . g587 Scaffold_2 AUGUSTUS transcript 2762443 2764277 0.26 + . g587.t1 Scaffold_2 AUGUSTUS start_codon 2762443 2762445 . + 0 transcript_id "g587.t1"; gene_id "g587"; Scaffold_2 AUGUSTUS CDS 2762443 2763074 0.26 + 0 transcript_id "g587.t1"; gene_id "g587"; Scaffold_2 AUGUSTUS CDS 2763332 2764277 0.54 + 1 transcript_id "g587.t1"; gene_id "g587"; Scaffold_2 AUGUSTUS stop_codon 2764275 2764277 . + 0 transcript_id "g587.t1"; gene_id "g587"; # protein sequence = [MSLDKESEVALIELCTGTSSNSSATSVDTANASATATGAGSLQAGIIQAAATQETTTASTDADAKTLSAISSISSAFE # TSSSSVSQTTITTSTKATSTTSSSTSSSTSAKVSSVSTTSASSGTSTSTSSISVSQSKASSTTSASVSSSASPIAQSVQAIQTPSSTATGSAAVEIVS # TGTVDGHLTTLTTQVFAATSSSGQPTPTQLDSTETFFKNKAAVGGVFGAAGLIFLVVLLAVVLKIVRYRSRRKFEKDLDEQVQQEVRSGTPMFGLGKE # DDGLSIMGGRAGVISDPEKAAYADSGYGYPNTAASYPTYGGSAPPQAAQPAYYSPNAYSSRRNPSRGQSQDFNYRDGGLSRVDSRGSARSYGTLNQPP # MNAFGPSQSISAGANAPAFAPATFAAHYGEYRHASPAPSTQSWQSHNQAFGARPGTPSALTPGGRGNSIPAPPRNVYTPQDVRSDSPAVLSRYSPSHS # SRTSGDGYGADAYIVGRITQIQTQNVGGLAVGPAYGKEPPSPNVPLPNPFDQRDR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g587 ### # start gene g588 Scaffold_2 AUGUSTUS gene 2766220 2768067 0.11 - . g588 Scaffold_2 AUGUSTUS transcript 2766220 2768067 0.11 - . g588.t1 Scaffold_2 AUGUSTUS stop_codon 2766220 2766222 . - 0 transcript_id "g588.t1"; gene_id "g588"; Scaffold_2 AUGUSTUS CDS 2766220 2767018 0.85 - 1 transcript_id "g588.t1"; gene_id "g588"; Scaffold_2 AUGUSTUS CDS 2767746 2767918 0.11 - 0 transcript_id "g588.t1"; gene_id "g588"; Scaffold_2 AUGUSTUS CDS 2767978 2768067 0.44 - 0 transcript_id "g588.t1"; gene_id "g588"; Scaffold_2 AUGUSTUS start_codon 2768065 2768067 . - 0 transcript_id "g588.t1"; gene_id "g588"; # protein sequence = [MLSSVLADENSQLHVRNAAGLALKNALSARESARQTEYSNRWLNLSSDAKAKIKQESLMTLGSSSSKAGTFAAQVVAA # IAAVELPQGHLCQAQEYGELPERESKYFSKIALPEIVPVLLMLLTKQEEDADEDEWNVSMAAGTCLTLLAGAVADAIVPAVIPFIEAHIKAEDWHHRE # AAVMTFGSILEGPDPSVLTPLAEQALPLLINMMADTNIHVKDTTAWTLGRICDILITVIKPDVHLHPLISALVGGLQDNPRIVVNCCWALMNLSDQLG # MFYGGEDEADTPATGPLSPYYEGIVQALLHVTERYFYIDSHISCILKLCLALATSPTIEQQHTRLSLRSLRMLQMTFLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g588 ### # start gene g589 Scaffold_2 AUGUSTUS gene 2769840 2771417 0.69 - . g589 Scaffold_2 AUGUSTUS transcript 2769840 2771417 0.69 - . g589.t1 Scaffold_2 AUGUSTUS stop_codon 2769840 2769842 . - 0 transcript_id "g589.t1"; gene_id "g589"; Scaffold_2 AUGUSTUS CDS 2769840 2771417 0.69 - 0 transcript_id "g589.t1"; gene_id "g589"; Scaffold_2 AUGUSTUS start_codon 2771415 2771417 . - 0 transcript_id "g589.t1"; gene_id "g589"; # protein sequence = [MRASRVLATRPERAILALADLCDERKDEDLVTAPLFYAPSRQVPPQTPYSVGSRSMQLNSTPIIPSPTIKLHEPGPSL # PSQQVPIRPPPEHMAPKRSQWTSPPPPEAPSSDHTLYESQLGMGLELATAATEAREKEEAYNSSSSSSEILDDEDRRSDAAESDDVTSIRSFTEGTST # ISAGPSFRRPSSGWLTQASTNVRLAHAQIDLTNDPPSRFSNAAAARSRFNLFDKPVDIPSSRPNEPPKSEFTKKYSSGPGRPILKIHSPLAVSIPLPP # SPDLTTGSQEEPGTVFYQTRSPHSTFSYPSPIGSHSPLSPYSYLSQQQRYYTTPHDIFPASLPTLSSNNIRDSAVEVSYIGLPSCTTGQMTPTPTSVS # AHNHSHSASTITASTPPPTVSRISSSNQNVLSSPSVTSTQFHPAPSARSHPLSPYDPPPSRKLPPPGTHPTHVWTATYQSSSPASSSTDHSTASISRS # PSPRSISPPRSSLPPSTLSEARMAKQENTTRSEDFRTSNNLDALVEVRDNVNQLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g589 ### # start gene g590 Scaffold_2 AUGUSTUS gene 2774149 2774538 0.88 - . g590 Scaffold_2 AUGUSTUS transcript 2774149 2774538 0.88 - . g590.t1 Scaffold_2 AUGUSTUS stop_codon 2774149 2774151 . - 0 transcript_id "g590.t1"; gene_id "g590"; Scaffold_2 AUGUSTUS CDS 2774149 2774538 0.88 - 0 transcript_id "g590.t1"; gene_id "g590"; Scaffold_2 AUGUSTUS start_codon 2774536 2774538 . - 0 transcript_id "g590.t1"; gene_id "g590"; # protein sequence = [MVSALLASINGSEKLPRGESMLTEARSIASQLSKIRFSEIAPRDLEAEAHAREHFEMNEEDAGMEESKELAEKRQMEG # LEDMLKRLNSGGVDTDPADQYKKSTLEDVQALRQRIISLCTMIGIRLVDQN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g590 ### # start gene g591 Scaffold_2 AUGUSTUS gene 2779641 2780186 1 + . g591 Scaffold_2 AUGUSTUS transcript 2779641 2780186 1 + . g591.t1 Scaffold_2 AUGUSTUS start_codon 2779641 2779643 . + 0 transcript_id "g591.t1"; gene_id "g591"; Scaffold_2 AUGUSTUS CDS 2779641 2780186 1 + 0 transcript_id "g591.t1"; gene_id "g591"; Scaffold_2 AUGUSTUS stop_codon 2780184 2780186 . + 0 transcript_id "g591.t1"; gene_id "g591"; # protein sequence = [MFTGATGALGGAYAAAANSELVISVQIEHPQAVAEIEEICQEGIDVVFVSSIHSSRCDPASRILIPDPKIGPFDLALS # MGVQFGSEAHEAAISKILASAKKHGKVAAIFCKVQLQVRGFLTNFYPLCVAVGLNGEQAAKRFAQGFQMVSVTTDIDTLTTAFANELTAATGKNTDAV # KGYSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g591 ### # start gene g592 Scaffold_2 AUGUSTUS gene 2788458 2791884 0.32 + . g592 Scaffold_2 AUGUSTUS transcript 2788458 2791884 0.32 + . g592.t1 Scaffold_2 AUGUSTUS start_codon 2788458 2788460 . + 0 transcript_id "g592.t1"; gene_id "g592"; Scaffold_2 AUGUSTUS CDS 2788458 2790740 0.48 + 0 transcript_id "g592.t1"; gene_id "g592"; Scaffold_2 AUGUSTUS CDS 2790817 2791884 0.47 + 0 transcript_id "g592.t1"; gene_id "g592"; Scaffold_2 AUGUSTUS stop_codon 2791882 2791884 . + 0 transcript_id "g592.t1"; gene_id "g592"; # protein sequence = [MPGYRRPLANVIFEFCRRIVAGEPGDTDNCDIVWKILADEVVLRIFEGGADVEEGSGEAGQDPSVETIVAFLAECAEA # VEPSVNEDEDDAELGGTFESHGSSSPHTTPHIISAFTSPLLSRVQSDVHPDAGSSRSQSLHPSDDFPEYLSSSPSGIPASRSYPIQALSALISIFSQL # CFTPHAPPANLDYVLAYILRVFETLTFVLVKGKSIRVRLAALQFLLRLRADRDHRLYFSVTGYDPEGQVVSLSALINRVGTSDIVDAPPPPTLDAVSQ # LRKARARARLPPSERDAITSRDRGGRLSQSFSRNATSRSRSRVGGSVLAGSGTRVYPNAALWRLPEQLLFSVSTVDTPSEILGTYDPSGPDGVVVLPI # SEYLSALLSILESEKSWDILSYVLCHLPVQISNKHLFCGPKSRVVISKILATLCLGVLEGGIFARSIERWPAGIKIRDAHGLVYHTLSVLVSYKGYFD # TKQRHSLVEVFLGGLSGQPATIMCCLNALSVSAFELQPSIIRYLSSILEKLSQIMSNPDMAVHILSFLSIIGSHPPLYSNFIEDDYKMVFGVALQYLQ # HHNRMTRAESPDTPMSSWALSQHVRILSYHLVYVWFLAVKLPDRPKYLRYITRQLLLANEGNDQVDDPTEVCFDWLARYTYASADPRPANSLLQDIVI # NPASNPEENGNIHSLASEKTWLLGNSVVTIRVLRKLGWIEILSRRPSGYTKFLGRLENVPLVGPGDVDPDMLTIPAVHLMDREFTRAQRPDAGENHRV # VRSLLEFPDNNQDEPNRPDPLAGYVWSRTAPSQRRKDVAIDPSFFALQLSSYPNRLGPSNVRMLVDSAAVPKFTTNLDRMPVIDTHKVGIMYVAPGQT # TEVEILRNTHGSPAYTTFLEGIGRLINLRGQIDVYAGGLNPDEDGEYAYAWWDDIGQILYHTATMMPSHPHDEHSTFKKRHIGNDFVRIVWNDSGIPY # RFDTLTTQFQFVNIVIEPHSVGHISAYSNSLHETEYFKVIVQRAEGMIEFAPVGHYKLVSAENLPLLVRQLSLLADWFAYVFSRTDCDTQRVEVRTNW # QERLSAIRRFKDQQYKVNVAEAKENGSVVHESVLVDDDKVQKDNILAQEAFRDFTSSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g592 ### # start gene g593 Scaffold_2 AUGUSTUS gene 2792739 2794031 0.55 + . g593 Scaffold_2 AUGUSTUS transcript 2792739 2794031 0.55 + . g593.t1 Scaffold_2 AUGUSTUS start_codon 2792739 2792741 . + 0 transcript_id "g593.t1"; gene_id "g593"; Scaffold_2 AUGUSTUS CDS 2792739 2793212 0.56 + 0 transcript_id "g593.t1"; gene_id "g593"; Scaffold_2 AUGUSTUS CDS 2793327 2794031 0.95 + 0 transcript_id "g593.t1"; gene_id "g593"; Scaffold_2 AUGUSTUS stop_codon 2794029 2794031 . + 0 transcript_id "g593.t1"; gene_id "g593"; # protein sequence = [MGKFYGQFMVDSFKRQMKENRKIEELILMFATHATGVLKKEPTLTGDSWKFELNNHIALFVKLLRESLRGLNHVSPEL # LGRLDMYTAKLGPAQSSDSGYESSSTSRDRDSIASLTISGHVSDMSLVKTVAGLFRLSESSVQKEVDQLRTLCTEKVKFPTCLKNINAGAPFPGRRED # FESEDAWQHWKTLETTQLQQMMVAMVQFNPELAKSTPSDVLPSVGTSSSSTRPGSVYSQTQSSSRHGSISSRLSLHGLGGDFVDITAPEDGEEDGIEV # GHHFTYIPPNPKRFYKRLLELCLIADLELMLSPEVDDNDEVSLGILSTLHIDLLNECAIRWRIGHAYRASCFLDLVKQFYERNDVPLECIPEALQNVV # RVMHDMELDKWPLTDVRCIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g593 ### # start gene g594 Scaffold_2 AUGUSTUS gene 2795190 2796456 0.42 + . g594 Scaffold_2 AUGUSTUS transcript 2795190 2796456 0.42 + . g594.t1 Scaffold_2 AUGUSTUS start_codon 2795190 2795192 . + 0 transcript_id "g594.t1"; gene_id "g594"; Scaffold_2 AUGUSTUS CDS 2795190 2795605 0.64 + 0 transcript_id "g594.t1"; gene_id "g594"; Scaffold_2 AUGUSTUS CDS 2795706 2795838 0.66 + 1 transcript_id "g594.t1"; gene_id "g594"; Scaffold_2 AUGUSTUS CDS 2796013 2796456 0.83 + 0 transcript_id "g594.t1"; gene_id "g594"; Scaffold_2 AUGUSTUS stop_codon 2796454 2796456 . + 0 transcript_id "g594.t1"; gene_id "g594"; # protein sequence = [MFPRPNDYLQPQKSSAWLEKARQLAIQGEKKIEPFNFQPESCVKLNNVEAARKLLDNMYNQIEVDKLAGVISDSAPPV # PEKVERERFLFSVKIVLAEGLMSGEASLTNKLDTFVTLSDEAGNRLAKTRTIYETAAPRCDVRDRALVGKHDTVGRAYLCLDPRRFGDLMTHDLWMDL # DSSGRVLMSPFIRQCLSRSVVKTLLKANSLGLDVNKALGNVTALYRSALGSSASEVQIPLPSGEKPRVRPEELSDVEIEQAILPLFDYFDANLQTLNT # YLSETAKEKVMTRVWKEILTVLEGLLVPPLSEVSSDMKPLSDKEVDIVFKWLKVGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g594 ### # start gene g595 Scaffold_2 AUGUSTUS gene 2799355 2801284 0.28 + . g595 Scaffold_2 AUGUSTUS transcript 2799355 2801284 0.28 + . g595.t1 Scaffold_2 AUGUSTUS start_codon 2799355 2799357 . + 0 transcript_id "g595.t1"; gene_id "g595"; Scaffold_2 AUGUSTUS CDS 2799355 2799712 0.28 + 0 transcript_id "g595.t1"; gene_id "g595"; Scaffold_2 AUGUSTUS CDS 2799810 2801284 0.57 + 2 transcript_id "g595.t1"; gene_id "g595"; Scaffold_2 AUGUSTUS stop_codon 2801282 2801284 . + 0 transcript_id "g595.t1"; gene_id "g595"; # protein sequence = [MRGGIRSDGSIYSHDTGYDAASSFRSGSGTGSYAPSYTSSYTRARAELEAEAISISSSRPASSAASGLDPTSERHYDH # DDLSISSTRRSSLFDEQGERYDEDDPTDYLYDTLRLSNPGLVCRFSLILISIPQSSSSRAQDSAARSILPAEITPSTSATPALAHSPSSASTYVSDTH # NALDDFDLTYITSGLALSANAMSEDSHMPDAVLEDLDFVRKRPTIESVSEQRLEGDARTALVKRPQRGVPMGWEDDLSIPTLFSDATTEGSRARQATT # IAAANLAGGVSSTLPQMSAATAGTSDASGSTQDKPRGPSAQRDLTAILDQSEINSANGMPNTVQLHASSVSSPSSTLPSFPGSLSNLENVSGTNSPGI # VENKNTIRRKRSVFAGLGALGIGSVNSRFFTHEEAQAETSQPMSPVSPVSPVSPARTIKGEGQRMDLDWGRSNAGESSVDVSAIPGGPSVPLALDSSM # VISPSMDLSTPHHSFAYSDSLARPLVVRGGPDSAGVRREWVIRKEVHSNQGGDGKPEIVKTGKDGGIQSEQTKDKDKADALTGMSIGTDEVWENFLLG # KFHVVRDDMSPRIGKVNSVDANGNVKFVNGGGDKATEGNVLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g595 ### # start gene g596 Scaffold_2 AUGUSTUS gene 2801795 2803468 0.33 + . g596 Scaffold_2 AUGUSTUS transcript 2801795 2803468 0.33 + . g596.t1 Scaffold_2 AUGUSTUS start_codon 2801795 2801797 . + 0 transcript_id "g596.t1"; gene_id "g596"; Scaffold_2 AUGUSTUS CDS 2801795 2803468 0.33 + 0 transcript_id "g596.t1"; gene_id "g596"; Scaffold_2 AUGUSTUS stop_codon 2803466 2803468 . + 0 transcript_id "g596.t1"; gene_id "g596"; # protein sequence = [MLAPRDIQEAFTNTATTKKLGTVIDRHEAARVAFSPGHDQTVTDKKGKTKMKKHSSIYISSFKGKHRPSDGAPQVKSE # GQIVLDHLDIEDQYLRQSTSKPSALAKNTGSVRDKVGTQSAPTYDRSYELITPRVGYDGVNLGNKEHEEFSLSDQGVNEGGWHIRTRTQHEPQSRENY # KRTYGTLAHPPHSFGNFSSVSPASSRPSRILKRLIPWDLSSPSVSTAVHGSSSKATSSTGNTSTMTRSVSTRDTTPTQSAGSDISIPYDPPWVTFASR # EQQEIQRNVLGRLEYSFEHVGLLPPKDKDVDRERSRTKNTVKEGLHELNAGSIIPKLHKKNDILSPVPADAFFMLLPLWPADTDIHSQRLSPFDIPSI # PAESRKYLLIFYKSLQVEQSSKGSSIYDSRLKILLPGFRAIARQVSHQELQGTGIRIPEQGISVNGPLEDAFTQMPGLSDTGSGSGLGTSPSVPVSDS # QLCVIASCYSRDVGLEFDPEALIELGLCRILGSKGDTNTDGKSSLPARMDGEQFDAERSMTVKLTPIGNAVMEMVWVGGLALTSFGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g596 ### # start gene g597 Scaffold_2 AUGUSTUS gene 2804027 2804815 0.52 - . g597 Scaffold_2 AUGUSTUS transcript 2804027 2804815 0.52 - . g597.t1 Scaffold_2 AUGUSTUS stop_codon 2804027 2804029 . - 0 transcript_id "g597.t1"; gene_id "g597"; Scaffold_2 AUGUSTUS CDS 2804027 2804407 0.86 - 0 transcript_id "g597.t1"; gene_id "g597"; Scaffold_2 AUGUSTUS CDS 2804480 2804815 0.53 - 0 transcript_id "g597.t1"; gene_id "g597"; Scaffold_2 AUGUSTUS start_codon 2804813 2804815 . - 0 transcript_id "g597.t1"; gene_id "g597"; # protein sequence = [MSATTTMKVPHLGGITAGYRMSGDKYDATKPTSVLINSMCTTVSLFDEMFANTRLRDTMNLLAIEPLGHGATSCPSEH # FTYWDSAIMALQVLEYLGIDRAFALGASQGGWIVSLAQILGLMPTGTSMDSESEDSRSKGAWNPKPLLISFVEKWCSMTPTPDFVIDDVWCGMVADLG # FPKTFSEKQLQFWNSTLKSVYNGDKGRKKVKGALVCLLERDGLLLRIRDIKCPVYWLQVGIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g597 ### # start gene g598 Scaffold_2 AUGUSTUS gene 2809507 2810931 0.14 - . g598 Scaffold_2 AUGUSTUS transcript 2809507 2810931 0.14 - . g598.t1 Scaffold_2 AUGUSTUS stop_codon 2809507 2809509 . - 0 transcript_id "g598.t1"; gene_id "g598"; Scaffold_2 AUGUSTUS CDS 2809507 2810032 0.98 - 1 transcript_id "g598.t1"; gene_id "g598"; Scaffold_2 AUGUSTUS CDS 2810391 2810658 0.43 - 2 transcript_id "g598.t1"; gene_id "g598"; Scaffold_2 AUGUSTUS CDS 2810715 2810931 0.51 - 0 transcript_id "g598.t1"; gene_id "g598"; Scaffold_2 AUGUSTUS start_codon 2810929 2810931 . - 0 transcript_id "g598.t1"; gene_id "g598"; # protein sequence = [MFRGLKVIWHSRGFPTQLLEVEFTGVAEALGNLTERGATNNVVKATVQLSESGFISVTEAIATGDIKDESITGKLKGL # FGGSATDSIDEETASAGSETPIEADTSSSSSSASSSSETPSVPSQSAEPKVSLKELGTIKLNFTSHLPTITPMSVDEKKKARSRSLERPIQHRYQEIE # AFPQALNNSQMWNWSTRLFLTEAHQKLTRETEAGLPSKWTKEELDGLEKALREHETWLNIWVEKQKSVKSFEDPVIETTEMKARAKVLETHLQKLAKR # RVPKSRKTSTTSSSSTSSSTASPNETAVPTTEPEKVEQQIPVDGSEQVPLQQSHPEEVRDEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g598 ### # start gene g599 Scaffold_2 AUGUSTUS gene 2811587 2812129 0.29 - . g599 Scaffold_2 AUGUSTUS transcript 2811587 2812129 0.29 - . g599.t1 Scaffold_2 AUGUSTUS stop_codon 2811587 2811589 . - 0 transcript_id "g599.t1"; gene_id "g599"; Scaffold_2 AUGUSTUS CDS 2811587 2812129 0.29 - 0 transcript_id "g599.t1"; gene_id "g599"; Scaffold_2 AUGUSTUS start_codon 2812127 2812129 . - 0 transcript_id "g599.t1"; gene_id "g599"; # protein sequence = [MQLAYVKSLAESIAGEKVYDVILTVPAYYSQFERDAVADAIEIAGLRTLALINDGSAVAVNYAMTRTFPTPEYHVIYD # AGASSIRATLVSFSTDSKTSTTQITVHGVGYDRGVGGTELDRRVREILADQFVAKHAKDIRKDKRGMAKLWKEAGRVKSILSANTEAMAHVSSVSLSL # TVMY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g599 ### # start gene g600 Scaffold_2 AUGUSTUS gene 2819521 2819988 0.99 + . g600 Scaffold_2 AUGUSTUS transcript 2819521 2819988 0.99 + . g600.t1 Scaffold_2 AUGUSTUS start_codon 2819521 2819523 . + 0 transcript_id "g600.t1"; gene_id "g600"; Scaffold_2 AUGUSTUS CDS 2819521 2819988 0.99 + 0 transcript_id "g600.t1"; gene_id "g600"; Scaffold_2 AUGUSTUS stop_codon 2819986 2819988 . + 0 transcript_id "g600.t1"; gene_id "g600"; # protein sequence = [MPSAPIDDSIVDVAEPRKDTIGLPEPALARLTKAGVDLSNGYPYHPSRPLYLDDVYRIRSKEWKHDDAGARADKSKSA # LLSAATKVTDLTTHIGTEIEGLQLKDLTDQQKDELALLIAERSVVFFRNQDISPQQQLALGRYYGEVEVHVSPGHIF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g600 ### # start gene g601 Scaffold_2 AUGUSTUS gene 2823324 2824091 0.79 - . g601 Scaffold_2 AUGUSTUS transcript 2823324 2824091 0.79 - . g601.t1 Scaffold_2 AUGUSTUS stop_codon 2823324 2823326 . - 0 transcript_id "g601.t1"; gene_id "g601"; Scaffold_2 AUGUSTUS CDS 2823324 2823770 0.91 - 0 transcript_id "g601.t1"; gene_id "g601"; Scaffold_2 AUGUSTUS CDS 2823830 2823921 0.88 - 2 transcript_id "g601.t1"; gene_id "g601"; Scaffold_2 AUGUSTUS CDS 2823980 2824091 0.81 - 0 transcript_id "g601.t1"; gene_id "g601"; Scaffold_2 AUGUSTUS start_codon 2824089 2824091 . - 0 transcript_id "g601.t1"; gene_id "g601"; # protein sequence = [MKFQDYRIERKWSAVGFCSGAIAGLVAITPGSGFVGAPAAVLFGVMAGTICNFATQLKFVFGYDDTLDIFASHAVGGV # VGNVLTGLFAQASVAGFDGITIIPGGWLDHHYIQLGYQLADSVAALSYSFVMTTIILWLMHFIPFLRMRGSEDAEIVGLDEYDMGEFAYDYVGLEQEI # GHDIETKMSEGMTTGGREPHHEHHHNVDENSLEKGLGSPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g601 ### # start gene g602 Scaffold_2 AUGUSTUS gene 2834927 2835799 0.53 + . g602 Scaffold_2 AUGUSTUS transcript 2834927 2835799 0.53 + . g602.t1 Scaffold_2 AUGUSTUS start_codon 2834927 2834929 . + 0 transcript_id "g602.t1"; gene_id "g602"; Scaffold_2 AUGUSTUS CDS 2834927 2835799 0.53 + 0 transcript_id "g602.t1"; gene_id "g602"; Scaffold_2 AUGUSTUS stop_codon 2835797 2835799 . + 0 transcript_id "g602.t1"; gene_id "g602"; # protein sequence = [MRDAASRLLGLHDFRNLCKLDTAKQITVFDRKILRADIDPVDPSTSTNSSSMYVLNLVGTAFLYHQVRHIMAILLLVG # RGLEQPSVVTSLLNTQEGAEQSRPGESLAVVDSKPEYQMADALPLMLWDCIYSDEDVDWRIDGHEPDSDQSNSSTEDGRGIYHLLHSIQSRSAVYLAL # NQHFLDAASLFFPKPWVTTKEGIMGIRYGGRVMIEAPLGAGTSRKLQHYVPLLKRKRLDPVDVANERWKNGKGFRRDQRKMVATIEDDSVIGWTVDLS # QDIYLLRIVSYCRTFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g602 ### # start gene g603 Scaffold_2 AUGUSTUS gene 2842275 2843138 0.49 + . g603 Scaffold_2 AUGUSTUS transcript 2842275 2843138 0.49 + . g603.t1 Scaffold_2 AUGUSTUS start_codon 2842275 2842277 . + 0 transcript_id "g603.t1"; gene_id "g603"; Scaffold_2 AUGUSTUS CDS 2842275 2843138 0.49 + 0 transcript_id "g603.t1"; gene_id "g603"; Scaffold_2 AUGUSTUS stop_codon 2843136 2843138 . + 0 transcript_id "g603.t1"; gene_id "g603"; # protein sequence = [MSYGNIPNIPRLPDEKQLVGEENWRPYKREILFAVQSKGLSGYIDRTIPKPNSYPGPIYPREPSPRPHFSAPEEWEAH # DRLVTSAIISNIIDPVGLGIDETKCASEVWTMLIKRFKKRDEQHIHLADTSLQQEKFDPTESTMEDHEKRMRNLIKKVHDLGGTATDAQFHLIVISSM # PPDWRQDVHSVPGTLSADAFTYLHTLWYEKEEEIREDERDTKRVKALMTARPYTQHTAKRVLGTSHRSSATTAASPAISRENAGLKAAGWKGSGRNKV # RQASRRRNQVRMQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g603 ### # start gene g604 Scaffold_2 AUGUSTUS gene 2844015 2845066 0.52 + . g604 Scaffold_2 AUGUSTUS transcript 2844015 2845066 0.52 + . g604.t1 Scaffold_2 AUGUSTUS start_codon 2844015 2844017 . + 0 transcript_id "g604.t1"; gene_id "g604"; Scaffold_2 AUGUSTUS CDS 2844015 2844307 0.52 + 0 transcript_id "g604.t1"; gene_id "g604"; Scaffold_2 AUGUSTUS CDS 2844844 2845066 0.84 + 1 transcript_id "g604.t1"; gene_id "g604"; Scaffold_2 AUGUSTUS stop_codon 2845064 2845066 . + 0 transcript_id "g604.t1"; gene_id "g604"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSKSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPAWGRGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENNPEIQHPVQHPGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g604 ### # start gene g605 Scaffold_2 AUGUSTUS gene 2851588 2853011 0.12 + . g605 Scaffold_2 AUGUSTUS transcript 2851588 2853011 0.12 + . g605.t1 Scaffold_2 AUGUSTUS start_codon 2851588 2851590 . + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_2 AUGUSTUS CDS 2851588 2851755 0.9 + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_2 AUGUSTUS CDS 2851814 2851981 0.83 + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_2 AUGUSTUS CDS 2852397 2853011 0.4 + 0 transcript_id "g605.t1"; gene_id "g605"; Scaffold_2 AUGUSTUS stop_codon 2853009 2853011 . + 0 transcript_id "g605.t1"; gene_id "g605"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASFKGKKTNNPDKATISVLRRSTEYLHDLLEKPVTLRSHVRQVSNLTARQSI # IDTLCLGHKLFPDIVSDSHFEQHLKFMAFANDARNRRSTPYPTIGSNKGSNKDEKSAVNEVSPRLSKVHCHTDSHVSSNCMSCLAEDKGESIQFKSVS # NGFLFHDLVTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFKFNANLVKTYATRARIAKVIADEACSILKSRQDSGSDSSASDTSF # ATAQSIPTTGSEDTVVTPTEMLFQSLRPSNEPLLHSLVVLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g605 ### # start gene g606 Scaffold_2 AUGUSTUS gene 2855790 2857316 0.91 - . g606 Scaffold_2 AUGUSTUS transcript 2855790 2857316 0.91 - . g606.t1 Scaffold_2 AUGUSTUS stop_codon 2855790 2855792 . - 0 transcript_id "g606.t1"; gene_id "g606"; Scaffold_2 AUGUSTUS CDS 2855790 2857316 0.91 - 0 transcript_id "g606.t1"; gene_id "g606"; Scaffold_2 AUGUSTUS start_codon 2857314 2857316 . - 0 transcript_id "g606.t1"; gene_id "g606"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPKNANLNNNRLNTSDSSSQKGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g606 ### # start gene g607 Scaffold_2 AUGUSTUS gene 2857367 2858533 0.91 - . g607 Scaffold_2 AUGUSTUS transcript 2857367 2858533 0.91 - . g607.t1 Scaffold_2 AUGUSTUS stop_codon 2857367 2857369 . - 0 transcript_id "g607.t1"; gene_id "g607"; Scaffold_2 AUGUSTUS CDS 2857367 2858533 0.91 - 0 transcript_id "g607.t1"; gene_id "g607"; Scaffold_2 AUGUSTUS start_codon 2858531 2858533 . - 0 transcript_id "g607.t1"; gene_id "g607"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g607 ### # start gene g608 Scaffold_2 AUGUSTUS gene 2859503 2860942 0.42 - . g608 Scaffold_2 AUGUSTUS transcript 2859503 2860942 0.42 - . g608.t1 Scaffold_2 AUGUSTUS stop_codon 2859503 2859505 . - 0 transcript_id "g608.t1"; gene_id "g608"; Scaffold_2 AUGUSTUS CDS 2859503 2859795 0.67 - 2 transcript_id "g608.t1"; gene_id "g608"; Scaffold_2 AUGUSTUS CDS 2860735 2860942 0.43 - 0 transcript_id "g608.t1"; gene_id "g608"; Scaffold_2 AUGUSTUS start_codon 2860940 2860942 . - 0 transcript_id "g608.t1"; gene_id "g608"; # protein sequence = [MLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWYYFLKMILWADRVTPRRGLGYELRVALIS # LLKWNGTILKEKVGAFRVLPHFKRNESIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEEEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g608 ### # start gene g609 Scaffold_2 AUGUSTUS gene 2863416 2863889 0.62 - . g609 Scaffold_2 AUGUSTUS transcript 2863416 2863889 0.62 - . g609.t1 Scaffold_2 AUGUSTUS stop_codon 2863416 2863418 . - 0 transcript_id "g609.t1"; gene_id "g609"; Scaffold_2 AUGUSTUS CDS 2863416 2863700 0.64 - 0 transcript_id "g609.t1"; gene_id "g609"; Scaffold_2 AUGUSTUS CDS 2863842 2863889 0.64 - 0 transcript_id "g609.t1"; gene_id "g609"; Scaffold_2 AUGUSTUS start_codon 2863887 2863889 . - 0 transcript_id "g609.t1"; gene_id "g609"; # protein sequence = [MKYSKRDLNYSKDPNRQDRSPINLIEETNKQVVNEAIGVEKPINLNTEEVFTKYKPVDKKVNPIKGTLPDEFRIERHI # HGDPLLELPEIVETFQTVCSYGKIIRKRGKRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g609 ### # start gene g610 Scaffold_2 AUGUSTUS gene 2864409 2865523 0.64 - . g610 Scaffold_2 AUGUSTUS transcript 2864409 2865523 0.64 - . g610.t1 Scaffold_2 AUGUSTUS stop_codon 2864409 2864411 . - 0 transcript_id "g610.t1"; gene_id "g610"; Scaffold_2 AUGUSTUS CDS 2864409 2865452 1 - 0 transcript_id "g610.t1"; gene_id "g610"; Scaffold_2 AUGUSTUS CDS 2865497 2865523 0.64 - 0 transcript_id "g610.t1"; gene_id "g610"; Scaffold_2 AUGUSTUS start_codon 2865521 2865523 . - 0 transcript_id "g610.t1"; gene_id "g610"; # protein sequence = [MIMFNLGRITNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKTFDAKVDLSTKELAALSPAIRKIIMRKIRNRRVRPRTK # TNNYVSTLSEDGETEILNEPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPV # VVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPFQVLL # GRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDKEKSTGENDSKGNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g610 ### # start gene g611 Scaffold_2 AUGUSTUS gene 2866545 2866838 0.5 - . g611 Scaffold_2 AUGUSTUS transcript 2866545 2866838 0.5 - . g611.t1 Scaffold_2 AUGUSTUS stop_codon 2866545 2866547 . - 0 transcript_id "g611.t1"; gene_id "g611"; Scaffold_2 AUGUSTUS CDS 2866545 2866838 0.5 - 0 transcript_id "g611.t1"; gene_id "g611"; Scaffold_2 AUGUSTUS start_codon 2866836 2866838 . - 0 transcript_id "g611.t1"; gene_id "g611"; # protein sequence = [MAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQDSSNGKNKYSNE # GAGSVHENFKIQCCSSGGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g611 ### # start gene g612 Scaffold_2 AUGUSTUS gene 2873162 2874049 0.77 + . g612 Scaffold_2 AUGUSTUS transcript 2873162 2874049 0.77 + . g612.t1 Scaffold_2 AUGUSTUS start_codon 2873162 2873164 . + 0 transcript_id "g612.t1"; gene_id "g612"; Scaffold_2 AUGUSTUS CDS 2873162 2874049 0.77 + 0 transcript_id "g612.t1"; gene_id "g612"; Scaffold_2 AUGUSTUS stop_codon 2874047 2874049 . + 0 transcript_id "g612.t1"; gene_id "g612"; # protein sequence = [MLELLSGSRVPLRPLVPSSPLSAALLTALNPRARSRSQRSSTVRIPENSRRSSSISPWSFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIK # DEMARLPEPVMLADYRQEVLRIDNRYGNARKLGKREAGKPFCFARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTRSLNPSLVVSLTTMGKPRTLRIP # ANPAVSAPRSTIWCRWESPSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g612 ### # start gene g613 Scaffold_2 AUGUSTUS gene 2882143 2882910 0.97 - . g613 Scaffold_2 AUGUSTUS transcript 2882143 2882910 0.97 - . g613.t1 Scaffold_2 AUGUSTUS stop_codon 2882143 2882145 . - 0 transcript_id "g613.t1"; gene_id "g613"; Scaffold_2 AUGUSTUS CDS 2882143 2882910 0.97 - 0 transcript_id "g613.t1"; gene_id "g613"; Scaffold_2 AUGUSTUS start_codon 2882908 2882910 . - 0 transcript_id "g613.t1"; gene_id "g613"; # protein sequence = [MSTPIPPAPNTSADDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPLSEEIGRRLKEFSQRFEPMDPGMEAHSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTAL # LPEIRQHLITVNIAQRIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPSMHTAHTTPADPHAMDIDATHTSNGILGKHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g613 ### # start gene g614 Scaffold_2 AUGUSTUS gene 2889559 2890190 0.92 - . g614 Scaffold_2 AUGUSTUS transcript 2889559 2890190 0.92 - . g614.t1 Scaffold_2 AUGUSTUS stop_codon 2889559 2889561 . - 0 transcript_id "g614.t1"; gene_id "g614"; Scaffold_2 AUGUSTUS CDS 2889559 2890040 0.98 - 2 transcript_id "g614.t1"; gene_id "g614"; Scaffold_2 AUGUSTUS CDS 2890112 2890190 0.93 - 0 transcript_id "g614.t1"; gene_id "g614"; Scaffold_2 AUGUSTUS start_codon 2890188 2890190 . - 0 transcript_id "g614.t1"; gene_id "g614"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTPRPIARRTGKQPQRRAASESPHDPPPHFDLDTGDHDDQDPPVDPDDPGVDNNND # DLDDDSGGLPRGEPGDPSGPGGPGGPGDPGGPGGPRSPYLLTSPTSNVLCWNSSRGSRVPLKPSVPSSPLSAVPLTALNPRARSRSQRYSTVRIPENS # RRSSSISPWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g614 ### # start gene g615 Scaffold_2 AUGUSTUS gene 2891469 2892240 0.34 - . g615 Scaffold_2 AUGUSTUS transcript 2891469 2892240 0.34 - . g615.t1 Scaffold_2 AUGUSTUS stop_codon 2891469 2891471 . - 0 transcript_id "g615.t1"; gene_id "g615"; Scaffold_2 AUGUSTUS CDS 2891469 2891861 0.66 - 0 transcript_id "g615.t1"; gene_id "g615"; Scaffold_2 AUGUSTUS CDS 2892001 2892240 0.36 - 0 transcript_id "g615.t1"; gene_id "g615"; Scaffold_2 AUGUSTUS start_codon 2892238 2892240 . - 0 transcript_id "g615.t1"; gene_id "g615"; # protein sequence = [MPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKMRQALRVF # DSEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLVPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIAS # SSPPINNPNSFSRGHINLPFAADVPKTDRTIFKH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g615 ### # start gene g616 Scaffold_2 AUGUSTUS gene 2894806 2896590 0.35 - . g616 Scaffold_2 AUGUSTUS transcript 2894806 2896590 0.35 - . g616.t1 Scaffold_2 AUGUSTUS stop_codon 2894806 2894808 . - 0 transcript_id "g616.t1"; gene_id "g616"; Scaffold_2 AUGUSTUS CDS 2894806 2896590 0.35 - 0 transcript_id "g616.t1"; gene_id "g616"; Scaffold_2 AUGUSTUS start_codon 2896588 2896590 . - 0 transcript_id "g616.t1"; gene_id "g616"; # protein sequence = [MLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVH # HVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHD # HPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPC # TSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVI # NSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLG # DRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSW # EPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g616 ### # start gene g617 Scaffold_2 AUGUSTUS gene 2896995 2898203 0.98 - . g617 Scaffold_2 AUGUSTUS transcript 2896995 2898203 0.98 - . g617.t1 Scaffold_2 AUGUSTUS stop_codon 2896995 2896997 . - 0 transcript_id "g617.t1"; gene_id "g617"; Scaffold_2 AUGUSTUS CDS 2896995 2898203 0.98 - 0 transcript_id "g617.t1"; gene_id "g617"; Scaffold_2 AUGUSTUS start_codon 2898201 2898203 . - 0 transcript_id "g617.t1"; gene_id "g617"; # protein sequence = [MDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPELEPPAENP # HIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFSESASERLP # AHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRL # QGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRL # EKHDLYLRPKNANLNNNRLNTSDSSSQKGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g617 ### # start gene g618 Scaffold_2 AUGUSTUS gene 2898580 2899746 0.85 - . g618 Scaffold_2 AUGUSTUS transcript 2898580 2899746 0.85 - . g618.t1 Scaffold_2 AUGUSTUS stop_codon 2898580 2898582 . - 0 transcript_id "g618.t1"; gene_id "g618"; Scaffold_2 AUGUSTUS CDS 2898580 2899746 0.85 - 0 transcript_id "g618.t1"; gene_id "g618"; Scaffold_2 AUGUSTUS start_codon 2899744 2899746 . - 0 transcript_id "g618.t1"; gene_id "g618"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g618 ### # start gene g619 Scaffold_2 AUGUSTUS gene 2902518 2905549 0.5 - . g619 Scaffold_2 AUGUSTUS transcript 2902518 2905549 0.5 - . g619.t1 Scaffold_2 AUGUSTUS stop_codon 2902518 2902520 . - 0 transcript_id "g619.t1"; gene_id "g619"; Scaffold_2 AUGUSTUS CDS 2902518 2903017 1 - 2 transcript_id "g619.t1"; gene_id "g619"; Scaffold_2 AUGUSTUS CDS 2903143 2905549 0.5 - 0 transcript_id "g619.t1"; gene_id "g619"; Scaffold_2 AUGUSTUS start_codon 2905547 2905549 . - 0 transcript_id "g619.t1"; gene_id "g619"; # protein sequence = [MANIAVGFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINPVVAKVAV # PLPEPSPSVSPTIQETPPGDSPRSRPRSRSRTLQAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAA # RATDRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASLPLGRIYPLSEKELIALKDFIDKQLATGAITPSSSPHGAPVLF # VPKKDGKLRLCVDFCGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRITEGDEWKTTFRTRYGSYEWKVMPFGLTNAPAAFQRFVNDI # FSDMLNVCVIVYLDDILIYSDMPEEHQEHVKEVLRRLRHHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFAN # FYRRFIYNYSDIVVPMTRLTRKGAPWIWDSSCQEAFENLKSAFTSAPILAHWEPNHPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAQLD # THNKELLAIFEAFKAWRHYLEGSGDPVDIVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDIYPKEGDISYAQVNPH # NFRPIFTNEQLTASLRATFLEGPVLRASIIMDIKALHQAIILTLPADPSSIVGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDH # PLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICAILVVVDRSSKQAIFIPTFDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRA # LGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAKFAYNNAPNASTGITPFFANKGYHPNITVRPKVDMKSDLARDFVIN # LDELHVFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g619 ### # start gene g620 Scaffold_2 AUGUSTUS gene 2906031 2906528 0.99 - . g620 Scaffold_2 AUGUSTUS transcript 2906031 2906528 0.99 - . g620.t1 Scaffold_2 AUGUSTUS stop_codon 2906031 2906033 . - 0 transcript_id "g620.t1"; gene_id "g620"; Scaffold_2 AUGUSTUS CDS 2906031 2906528 0.99 - 0 transcript_id "g620.t1"; gene_id "g620"; Scaffold_2 AUGUSTUS start_codon 2906526 2906528 . - 0 transcript_id "g620.t1"; gene_id "g620"; # protein sequence = [MKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKCEETRKREA # GKPFVARNLKKGSLDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSIPANPAVSAPRSTILVQMGKSFPPRRKEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g620 ### # start gene g621 Scaffold_2 AUGUSTUS gene 2907123 2907527 0.94 - . g621 Scaffold_2 AUGUSTUS transcript 2907123 2907527 0.94 - . g621.t1 Scaffold_2 AUGUSTUS stop_codon 2907123 2907125 . - 0 transcript_id "g621.t1"; gene_id "g621"; Scaffold_2 AUGUSTUS CDS 2907123 2907527 0.94 - 0 transcript_id "g621.t1"; gene_id "g621"; Scaffold_2 AUGUSTUS start_codon 2907525 2907527 . - 0 transcript_id "g621.t1"; gene_id "g621"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGIYDAQGEAEDSLGNC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g621 ### # start gene g622 Scaffold_2 AUGUSTUS gene 2907673 2908191 0.95 - . g622 Scaffold_2 AUGUSTUS transcript 2907673 2908191 0.95 - . g622.t1 Scaffold_2 AUGUSTUS stop_codon 2907673 2907675 . - 0 transcript_id "g622.t1"; gene_id "g622"; Scaffold_2 AUGUSTUS CDS 2907673 2908191 0.95 - 0 transcript_id "g622.t1"; gene_id "g622"; Scaffold_2 AUGUSTUS start_codon 2908189 2908191 . - 0 transcript_id "g622.t1"; gene_id "g622"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFTESISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGQSTTRIESPILQAIARRTGKQPQRRAASESPRDSPPHFDLDTGDHNDQDPLSTPMTRAPTTIMTTWMTIPAVTTW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g622 ### # start gene g623 Scaffold_2 AUGUSTUS gene 2919130 2920117 0.45 - . g623 Scaffold_2 AUGUSTUS transcript 2919130 2920117 0.45 - . g623.t1 Scaffold_2 AUGUSTUS stop_codon 2919130 2919132 . - 0 transcript_id "g623.t1"; gene_id "g623"; Scaffold_2 AUGUSTUS CDS 2919130 2919813 0.65 - 0 transcript_id "g623.t1"; gene_id "g623"; Scaffold_2 AUGUSTUS CDS 2919959 2920117 0.45 - 0 transcript_id "g623.t1"; gene_id "g623"; Scaffold_2 AUGUSTUS start_codon 2920115 2920117 . - 0 transcript_id "g623.t1"; gene_id "g623"; # protein sequence = [MFNASFLFQDLLQFSLTNLRTLQSRIANLSLFSPNENSEDIATRDLVYLLVPYSFLQLLDNYEIIPEDQVALYDRKVS # NPGNRRELKIKQYQAEKDLRTRIETIRKRRNQRPITNSSDSATDFDLLSSLLPSAMDEEEEDSSSTDDVLRETTLLLIRLFFSQTQTQLQNMNQELEL # LRTAPPSASTAMSRLEDDDDRRGKHKESEENMWKIDAPTPKVGAGGPLLDEAGKVRVEVQFETPLPNGTDTCHIHHAASPTIHHTSLWSRRSCTFSSA # SFWSGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g623 ### # start gene g624 Scaffold_2 AUGUSTUS gene 2922782 2923585 0.09 - . g624 Scaffold_2 AUGUSTUS transcript 2922782 2923585 0.09 - . g624.t1 Scaffold_2 AUGUSTUS stop_codon 2922782 2922784 . - 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_2 AUGUSTUS CDS 2922782 2922931 0.99 - 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_2 AUGUSTUS CDS 2922984 2923142 0.27 - 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_2 AUGUSTUS CDS 2923196 2923515 0.43 - 2 transcript_id "g624.t1"; gene_id "g624"; Scaffold_2 AUGUSTUS CDS 2923573 2923585 0.5 - 0 transcript_id "g624.t1"; gene_id "g624"; Scaffold_2 AUGUSTUS start_codon 2923583 2923585 . - 0 transcript_id "g624.t1"; gene_id "g624"; # protein sequence = [MPITNGLQITTGSCNPAPIGTIPSVSNMPSAKFEFPTNMGNVTGNTEFTIKLNMNNLDTGNFVNANENYFAAPQQLNS # NGQIIGHTHVVIEAINGLADTTPSDPQKFAFFKGINTAAVNGQVTADVTSGVPAGTYRICTINSSSNHQPVIVPIAQHGSLDDCVYFTAAGGPATPPA # SSAAATATAAAASASAATDAAAAAATTAAKSGKSKKN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g624 ### # start gene g625 Scaffold_2 AUGUSTUS gene 2923663 2924249 0.24 - . g625 Scaffold_2 AUGUSTUS transcript 2923663 2924249 0.24 - . g625.t1 Scaffold_2 AUGUSTUS stop_codon 2923663 2923665 . - 0 transcript_id "g625.t1"; gene_id "g625"; Scaffold_2 AUGUSTUS CDS 2923663 2924063 0.65 - 2 transcript_id "g625.t1"; gene_id "g625"; Scaffold_2 AUGUSTUS CDS 2924225 2924249 0.37 - 0 transcript_id "g625.t1"; gene_id "g625"; Scaffold_2 AUGUSTUS start_codon 2924247 2924249 . - 0 transcript_id "g625.t1"; gene_id "g625"; # protein sequence = [MCVPYMFSPSGDSSSSSSSKSKSGSGSSSKSGSSSGSSSSSGSSGSAASAASAAASTSSAASSAATSAASTNNDATGS # ASTSGATGSLSTTDITTNATADSTDPQSSLTLDPRVIATGFLNNGQGKRHEPNLIFLNINPLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g625 ### # start gene g626 Scaffold_2 AUGUSTUS gene 2925372 2926046 0.88 - . g626 Scaffold_2 AUGUSTUS transcript 2925372 2926046 0.88 - . g626.t1 Scaffold_2 AUGUSTUS stop_codon 2925372 2925374 . - 0 transcript_id "g626.t1"; gene_id "g626"; Scaffold_2 AUGUSTUS CDS 2925372 2926046 0.88 - 0 transcript_id "g626.t1"; gene_id "g626"; Scaffold_2 AUGUSTUS start_codon 2926044 2926046 . - 0 transcript_id "g626.t1"; gene_id "g626"; # protein sequence = [MRKHLASALKKRSKSIQSAITEYNTVAAKMKPKRQPVDWEEVVEYAFLSEFDILRDTREDIRERPWAVPANRVIITQF # FKVIGAEDELSRVHQEIRRLITYMQQEKNELITRERELMPTNPTLALQVRNFRRERGRFHEVHKKRLLSITKLPGFDWSTNSKYFFPGTSVERRINHT # SYAAEALTAERGVDEDNTDDDDDDEDEDEELVRRIDTFLSVATDVLEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g626 ### # start gene g627 Scaffold_2 AUGUSTUS gene 2932018 2932800 0.45 - . g627 Scaffold_2 AUGUSTUS transcript 2932018 2932800 0.45 - . g627.t1 Scaffold_2 AUGUSTUS stop_codon 2932018 2932020 . - 0 transcript_id "g627.t1"; gene_id "g627"; Scaffold_2 AUGUSTUS CDS 2932018 2932421 0.47 - 2 transcript_id "g627.t1"; gene_id "g627"; Scaffold_2 AUGUSTUS CDS 2932794 2932800 0.45 - 0 transcript_id "g627.t1"; gene_id "g627"; Scaffold_2 AUGUSTUS start_codon 2932798 2932800 . - 0 transcript_id "g627.t1"; gene_id "g627"; # protein sequence = [MSEEIRKLSSPPTTPTRSGRVKHISSPKILRPPHPAASKTQPEAHDVIASPSQRKISLVWISSEDEADCPDDSEDSDD # SSGGWVPQSAAEVSSDEDEPLAGSGGVTAAEAGSKSWEINRKDVPGIPRQKQLRRTLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g627 ### # start gene g628 Scaffold_2 AUGUSTUS gene 2933726 2934382 0.5 + . g628 Scaffold_2 AUGUSTUS transcript 2933726 2934382 0.5 + . g628.t1 Scaffold_2 AUGUSTUS start_codon 2933726 2933728 . + 0 transcript_id "g628.t1"; gene_id "g628"; Scaffold_2 AUGUSTUS CDS 2933726 2934382 0.5 + 0 transcript_id "g628.t1"; gene_id "g628"; Scaffold_2 AUGUSTUS stop_codon 2934380 2934382 . + 0 transcript_id "g628.t1"; gene_id "g628"; # protein sequence = [MLAPSAGPCFSGRPLSHEPLSTSPSSLSLRLSGHPSTLNSLSSLAHLADPQLSGRSVSCSPLPLGEESPSSIRGSSGE # ADSSLVCSGTNGIQSTPVSLVHSAPDGVQPSPVSTGQAEQVQHRTVNLGISEKSLAKATSALKTKLLNQAISQLQAEQEEKVIDLADTHGVAVSRLKE # TCWNLKTSSEETGEQCPGCHFTCKKQGAESRYDYLAKVIDTC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g628 ### # start gene g629 Scaffold_2 AUGUSTUS gene 2935048 2935551 0.93 + . g629 Scaffold_2 AUGUSTUS transcript 2935048 2935551 0.93 + . g629.t1 Scaffold_2 AUGUSTUS start_codon 2935048 2935050 . + 0 transcript_id "g629.t1"; gene_id "g629"; Scaffold_2 AUGUSTUS CDS 2935048 2935551 0.93 + 0 transcript_id "g629.t1"; gene_id "g629"; Scaffold_2 AUGUSTUS stop_codon 2935549 2935551 . + 0 transcript_id "g629.t1"; gene_id "g629"; # protein sequence = [MNYPNFRTKISAKYKVKIIGWPIDVPLVSPRDITDPSKLDTLYDAWRSGSAYWSTMDKREYKRFMQQLDNDKAAGLQI # EIPRKGRSDIGGTHQKATTKRSRENDIEEPPAKRKRTSLSTNKTAIIVQDQDANDDEENMEEDQDANYDEENVEEGSEDEDEGEDELDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g629 ### # start gene g630 Scaffold_2 AUGUSTUS gene 2947659 2948140 0.8 + . g630 Scaffold_2 AUGUSTUS transcript 2947659 2948140 0.8 + . g630.t1 Scaffold_2 AUGUSTUS start_codon 2947659 2947661 . + 0 transcript_id "g630.t1"; gene_id "g630"; Scaffold_2 AUGUSTUS CDS 2947659 2947744 0.8 + 0 transcript_id "g630.t1"; gene_id "g630"; Scaffold_2 AUGUSTUS CDS 2947804 2948140 0.83 + 1 transcript_id "g630.t1"; gene_id "g630"; Scaffold_2 AUGUSTUS stop_codon 2948138 2948140 . + 0 transcript_id "g630.t1"; gene_id "g630"; # protein sequence = [MYHSAPDDRFSTQKALQTVAAGQQAENLLDFDDAPAVEGRPSGLAATEVLSHTPAAANLLAGTSSNPLDDLVSIFGAP # ATPAPPSANSHDIFGGLGVNSAFSSGGTGSLGSPAVQSPSVAVPPLQKNQQPEDDLLGFFSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g630 ### # start gene g631 Scaffold_2 AUGUSTUS gene 2956307 2957200 0.89 - . g631 Scaffold_2 AUGUSTUS transcript 2956307 2957200 0.89 - . g631.t1 Scaffold_2 AUGUSTUS stop_codon 2956307 2956309 . - 0 transcript_id "g631.t1"; gene_id "g631"; Scaffold_2 AUGUSTUS CDS 2956307 2957200 0.89 - 0 transcript_id "g631.t1"; gene_id "g631"; Scaffold_2 AUGUSTUS start_codon 2957198 2957200 . - 0 transcript_id "g631.t1"; gene_id "g631"; # protein sequence = [MLSPPLAVGRMAVASDQLQDSGQEKGKAVHVLHTWKDHLWELGSKGDIPQDLPMKEDEDVNLEKAGDTEEEGMHVPVD # ADTSVVVPEPSSLSDAPDGTRAPVYTPDEVSQLLRMSLIQVIARYIDAPAFTFPIPATIFYANHILPSRPNFPELVLLPSSSSPADTSPPYDSSSPDP # YSITVKSSSFKSLTAFLKSTEKSGLITTKAPQKHSAQTDVLITAVNSSHPDVQVHRPFATVREVEAKAARKVLQEVKQREQRAAAELELEVQEFWKPH # LISVALFEAMGAKLAVILFQICY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g631 ### # start gene g632 Scaffold_2 AUGUSTUS gene 2959351 2960512 0.69 - . g632 Scaffold_2 AUGUSTUS transcript 2959351 2960512 0.69 - . g632.t1 Scaffold_2 AUGUSTUS stop_codon 2959351 2959353 . - 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_2 AUGUSTUS CDS 2959351 2959644 0.71 - 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_2 AUGUSTUS CDS 2959703 2960512 0.7 - 0 transcript_id "g632.t1"; gene_id "g632"; Scaffold_2 AUGUSTUS start_codon 2960510 2960512 . - 0 transcript_id "g632.t1"; gene_id "g632"; # protein sequence = [MSDICIVAKCKSNSQIRLQCHNQALFAVPQSSRFRVPDCAACLFDSESLQLTPVFWLEAKASSHNDPKKRKESEKEKG # KNKLTDSEDEDEDEDEDEDIGAFQANRQPNGASKTSVNTLELCIPQLREQVDFAFKAFPNGPTTYNVFLFIGMYWSLLVFDKEKERSVDDFIGTFQDS # VTKSQDEAAAAKDRTPPKKRRRRILEIPKINIPDNLLPELRYHHEPLVLEQPAKSYNPAFLECISSLLEQQDFTFPSQPSWFTPSNNFTYQPPKTEDF # AQIHAAYARSVDDFLKYHDMVLQDEIYSPPSGDNSKDYRDSSRVQVTARGPYLMRDRRGGSVSDFGSPSEGLRRKAKDIDSPSPAPVNRDRRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g632 ### # start gene g633 Scaffold_2 AUGUSTUS gene 2961265 2961865 0.68 + . g633 Scaffold_2 AUGUSTUS transcript 2961265 2961865 0.68 + . g633.t1 Scaffold_2 AUGUSTUS start_codon 2961265 2961267 . + 0 transcript_id "g633.t1"; gene_id "g633"; Scaffold_2 AUGUSTUS CDS 2961265 2961330 0.68 + 0 transcript_id "g633.t1"; gene_id "g633"; Scaffold_2 AUGUSTUS CDS 2961389 2961865 0.99 + 0 transcript_id "g633.t1"; gene_id "g633"; Scaffold_2 AUGUSTUS stop_codon 2961863 2961865 . + 0 transcript_id "g633.t1"; gene_id "g633"; # protein sequence = [MSVIENIYKPCRRPDPEEAPAHIKVASKDYPKGKALPENLKLDRERLKDFSYDKPYKLFYGFGVNLQDFIEYHQKHNL # PKPPPTTKLSIVRQCMVHQVLEDLQKHCDFDWFELHLAMAVEYKYILVIYDSYTFDRAEMEDAIEQEIYEVLRDRMEVCKNQEPRWFRTFYDIYQSVL # FRRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g633 ### # start gene g634 Scaffold_2 AUGUSTUS gene 2962987 2963580 0.54 - . g634 Scaffold_2 AUGUSTUS transcript 2962987 2963580 0.54 - . g634.t1 Scaffold_2 AUGUSTUS stop_codon 2962987 2962989 . - 0 transcript_id "g634.t1"; gene_id "g634"; Scaffold_2 AUGUSTUS CDS 2962987 2963580 0.54 - 0 transcript_id "g634.t1"; gene_id "g634"; Scaffold_2 AUGUSTUS start_codon 2963578 2963580 . - 0 transcript_id "g634.t1"; gene_id "g634"; # protein sequence = [MTRIAGKELSRRQWKAYSQDSRDHILAQLRNYISQLREIVPPPHSPPFICNVLGGPIMDHRLCVDRPYGPYCDEEQMN # LQRRQGFTVERFAEIFNIPEEFVGLIKHAHDLRHPVVFTHNDIAMRNIMVSGDRVTGLIDWECAGWLPAHWEYVKANWTEFIAEEWIDDLRKFIPPYD # LENEADELIGWSRSWEPRLDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g634 ### # start gene g635 Scaffold_2 AUGUSTUS gene 2966335 2966745 0.96 + . g635 Scaffold_2 AUGUSTUS transcript 2966335 2966745 0.96 + . g635.t1 Scaffold_2 AUGUSTUS start_codon 2966335 2966337 . + 0 transcript_id "g635.t1"; gene_id "g635"; Scaffold_2 AUGUSTUS CDS 2966335 2966745 0.96 + 0 transcript_id "g635.t1"; gene_id "g635"; Scaffold_2 AUGUSTUS stop_codon 2966743 2966745 . + 0 transcript_id "g635.t1"; gene_id "g635"; # protein sequence = [MSKSAPDTSSRILLTDPPSTIANKIRSAVTDSIPGITYDPVNRPGTANLLTILAACNYDNEDVQETAGRYVGKNHGAL # KKDLTEAVVELLKGPREKFEKLRTETGYLEQIAQAGAEKARSRSEATMVEVRKRVGLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g635 ### # start gene g636 Scaffold_2 AUGUSTUS gene 2969795 2971039 1 - . g636 Scaffold_2 AUGUSTUS transcript 2969795 2971039 1 - . g636.t1 Scaffold_2 AUGUSTUS stop_codon 2969795 2969797 . - 0 transcript_id "g636.t1"; gene_id "g636"; Scaffold_2 AUGUSTUS CDS 2969795 2971039 1 - 0 transcript_id "g636.t1"; gene_id "g636"; Scaffold_2 AUGUSTUS start_codon 2971037 2971039 . - 0 transcript_id "g636.t1"; gene_id "g636"; # protein sequence = [MPLFLPEILPWLFKSVVFHPGGLYNGVTTRAEKDAMSYIPFCRSIKQDEKFARSLALQVKQCSIRDWLDAPNANTAMV # KAFLNTHIDSLPHLTNLTTITLSRMPLAPQLLAHIRRLLHLTSFTIDRCDFAEILPKHVQKLAAKSKLKSFRLWVRSKDDSDDEDDEVHALVVKEFLP # LIVNLSEFGTDSWLLMQALISCHDTLPPLLETLEILSIRDTKVLCEYLYKLPALTSLTMDSALSTTVYSNISLSRLTSLRHLTCPPHFVSHFSGSHEL # ASLSFSTRRPDNSWVAIHNAAGVSWPRVDQLLAFCLPYTLALGIGLDPTSFLDGTGIVLDRLRKLTIISDECFILNSGGTPDQNGGAAMSQLVQILMK # EARFPSLERILFRDDDNKEWTWREDSSSGKWKPVPEEDEDVY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g636 ### # start gene g637 Scaffold_2 AUGUSTUS gene 2973217 2973744 0.85 + . g637 Scaffold_2 AUGUSTUS transcript 2973217 2973744 0.85 + . g637.t1 Scaffold_2 AUGUSTUS start_codon 2973217 2973219 . + 0 transcript_id "g637.t1"; gene_id "g637"; Scaffold_2 AUGUSTUS CDS 2973217 2973744 0.85 + 0 transcript_id "g637.t1"; gene_id "g637"; Scaffold_2 AUGUSTUS stop_codon 2973742 2973744 . + 0 transcript_id "g637.t1"; gene_id "g637"; # protein sequence = [MTSGSPDSTIVQEDTMTENGVIADKLNPSHITLKVCPPSSEVYLSIVPQLATLLKSCIDNNITMNFIQPFSIEDASAF # WLSAEENVVQRKQFVIIAQESQGSSEDEADYNDSRHEQHVLESRTPVILGCVILYLAQLPNAKHRAEVGKLIVGREHRKRSVIGLSSMLLSRFVKGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g637 ### # start gene g638 Scaffold_2 AUGUSTUS gene 2988052 2991045 0.55 - . g638 Scaffold_2 AUGUSTUS transcript 2988052 2991045 0.55 - . g638.t1 Scaffold_2 AUGUSTUS stop_codon 2988052 2988054 . - 0 transcript_id "g638.t1"; gene_id "g638"; Scaffold_2 AUGUSTUS CDS 2988052 2991045 0.55 - 0 transcript_id "g638.t1"; gene_id "g638"; Scaffold_2 AUGUSTUS start_codon 2991043 2991045 . - 0 transcript_id "g638.t1"; gene_id "g638"; # protein sequence = [MAPKAPKRSAKSSSSASSRTAVDPSVSAYTLEIYRKRNALSRLPINDYDEEDSACTGKRKAANNAESVDDIRDRIVKV # SKAAHWNPADGRWATVRQLLQLTCTRGRDFRWIVPEKKQIVASPPLELRLWSEQVSELLRRKWKPRSGPEYEKELLYRAQKEWVPTESYPTRETAVVK # QILEKREWEADILELVQQWLASSTQDGSTEIRVILAKKKLVDSLKPFLDALLPQDAPDAARVKNFQKEHWVTEVTHFFKQNGAPTLTRNSTSNLSVAS # KERKSVALHEKVKTWQQTLLVETKDRPRRASDAPSEASSSKSKTKRKETAESTTALRKSAQSVAKQSSLEFAASKSSATKLAGKPKASVPRDPPRVDD # DLLSNDFHHDVHIGLPSQVCTSYLNPILILTTSQLQPLSFRSSQIKHSTPKDGTGQLVAIEEPAPSSSPLSPPPLHTSPSRPPRIISVPEGASKSSFK # RPQSPSSATNSRPAKQARIEKNIAPVADNSPMKVDSLKSHHTTNVPIPPPPPSSSPLSPPPATPDEGNGNKKRVPTLMELLSVRKTTATPMKRKNTLT # IISTPLTGRAAGPSRNQLVVAASGSGQRTSMASALVSAQGEKPQAPLPAPSTRRSDSADANDHNARLKIAERAPSSVAGPSNSNSINQTAVRAPPTAV # HETQTFTSAVTSTYSVQHQPEFTASGYAIDLPLSVIDGFVGHGGSDGGSVEGDGVDGYSNNNLEVKDKGKAIEGKSPKKRGYFGMEDVDLTSPTKLRP # GVVRPFAGSSSEDEDEDDGGEAKNVTPKNKISTLNASQLPDFTHDFDAFDPPQASTQPRRKSNGGSTHGGGGNLYSGNGFGAAPWANGVNDGEDDDFN # DNADSPDYNYVASQSIFTKDGAINVRSFDDDPTVHSQAFFSIPGLESPIKKTKKNKGWTETGRERPEENDGFGFGYSSQFDVDGDVEMVSKLIDRDVD # LMDVDADDEEGVGEGNSVGDKGHPGRDRSRVMWGGWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g638 ### # start gene g639 Scaffold_2 AUGUSTUS gene 2991426 2993072 0.7 + . g639 Scaffold_2 AUGUSTUS transcript 2991426 2993072 0.7 + . g639.t1 Scaffold_2 AUGUSTUS start_codon 2991426 2991428 . + 0 transcript_id "g639.t1"; gene_id "g639"; Scaffold_2 AUGUSTUS CDS 2991426 2993072 0.7 + 0 transcript_id "g639.t1"; gene_id "g639"; Scaffold_2 AUGUSTUS stop_codon 2993070 2993072 . + 0 transcript_id "g639.t1"; gene_id "g639"; # protein sequence = [MNAPKPCPSVPLPASPAPPAPLVVRRRSSTFTSISNWANAVQPGSPAPYSPPLYSPSGSPGLVARRPSLPRRPSISAA # RGINRRRPSISHIRARSGSASFLQLVDTPTTAGHRSIPTPGPVSPGKVSDFDLTNLGYTSIFVHLPHTPSTPSPFILPANTDKIPIPSTPRTPPAAPT # KGLKRFRSLGMLKGHRRRGKSVAPPASPSTTAAVPPLPLLPSAESASIPPSSPTHRIPAAKKSKPVLTPPPSTTTFKKAKKASAAAAPPLPPTLANEL # LLMQFMGGGSLETHAKRVMEKQARDVAPAGHSKDIIASTTAGTAPFGVGVGAVYRDEKGMMWWDAEEAVEYQPLLPPSSPGSPGSPTRTWVFFGHPSP # RAHRLAGFNVQDGDERRGSVTSSIPSSPSLSLSLNHMITPAPIDTAARAMHLLRIPTSEMSASFAALNSSLTTASGAAARQRRNKRTRRRPAPLKLHS # APAVPTASHVLHLFDDSFVPSPAMRRIGNSSGDISAPATCTDFLPPPKEPSDLISIKEAKISKTGFKGKARALFGGFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g639 ### # start gene g640 Scaffold_2 AUGUSTUS gene 2996141 2996701 0.2 - . g640 Scaffold_2 AUGUSTUS transcript 2996141 2996701 0.2 - . g640.t1 Scaffold_2 AUGUSTUS stop_codon 2996141 2996143 . - 0 transcript_id "g640.t1"; gene_id "g640"; Scaffold_2 AUGUSTUS CDS 2996141 2996582 0.68 - 1 transcript_id "g640.t1"; gene_id "g640"; Scaffold_2 AUGUSTUS CDS 2996676 2996701 0.2 - 0 transcript_id "g640.t1"; gene_id "g640"; Scaffold_2 AUGUSTUS start_codon 2996699 2996701 . - 0 transcript_id "g640.t1"; gene_id "g640"; # protein sequence = [MSSRNCTTSLHTGVLAKALKQAGSRITVTPEQAQSLPSIANLVDVSKTGNSSIQDNADSVDLKALLVDLAQERKAATA # TGNSKYPEEHEEELEEEEEEDWESPRSKAARLRKASADLQSIELLGKFVNLVDLLPPLPKKGDFKVEAIKASQYFFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g640 ### # start gene g641 Scaffold_2 AUGUSTUS gene 2997544 2998638 0.06 - . g641 Scaffold_2 AUGUSTUS transcript 2997544 2998638 0.06 - . g641.t1 Scaffold_2 AUGUSTUS stop_codon 2997544 2997546 . - 0 transcript_id "g641.t1"; gene_id "g641"; Scaffold_2 AUGUSTUS CDS 2997544 2997795 0.08 - 0 transcript_id "g641.t1"; gene_id "g641"; Scaffold_2 AUGUSTUS CDS 2997972 2998123 0.93 - 2 transcript_id "g641.t1"; gene_id "g641"; Scaffold_2 AUGUSTUS CDS 2998293 2998638 0.7 - 0 transcript_id "g641.t1"; gene_id "g641"; Scaffold_2 AUGUSTUS start_codon 2998636 2998638 . - 0 transcript_id "g641.t1"; gene_id "g641"; # protein sequence = [MRFKESIEQQSYLNHASELGNVELVYAGLDVLGSTPWQINRKVFDVVLKVWNSGEKLGKLPPAVFADPEPVLPEGADI # KTRTTYIHRMKGWTQAKANNHSDRCSVNYKIEIARTVKSKPLGERGLRWLQIHLANLYGYDKANFDERVQFVQDHLDDIYDSATKPLEDGTCNGLQHY # AALGGDSRGAQQVNLSAGERPSDVYTYVGNMAEEIIKRDIAKGEKYAAVLQGKITRKIVKQTVSSLFSFINQY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g641 ### # start gene g642 Scaffold_2 AUGUSTUS gene 2999753 3000535 0.38 - . g642 Scaffold_2 AUGUSTUS transcript 2999753 3000535 0.38 - . g642.t1 Scaffold_2 AUGUSTUS stop_codon 2999753 2999755 . - 0 transcript_id "g642.t1"; gene_id "g642"; Scaffold_2 AUGUSTUS CDS 2999753 2999979 0.56 - 2 transcript_id "g642.t1"; gene_id "g642"; Scaffold_2 AUGUSTUS CDS 3000193 3000535 0.61 - 0 transcript_id "g642.t1"; gene_id "g642"; Scaffold_2 AUGUSTUS start_codon 3000533 3000535 . - 0 transcript_id "g642.t1"; gene_id "g642"; # protein sequence = [MENFLKNPPRYTLLPTPLPSISTNASTKNSTWLVDSATQDSLAVIDACLYQLFDVPRAKGIFDRLRRDAVGKLLEVRM # YNAFLEAYVNMGMSKAADNREFWIDCAWELFTTMEAENVVADRVFETSSEAAEVIKLLSKAAADLGHTEVIARLGQTEAIGAHYEDILADIPEVMPVM # RVKVSFLDSKQSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g642 ### # start gene g643 Scaffold_2 AUGUSTUS gene 3001116 3002654 0.41 - . g643 Scaffold_2 AUGUSTUS transcript 3001116 3002654 0.41 - . g643.t1 Scaffold_2 AUGUSTUS stop_codon 3001116 3001118 . - 0 transcript_id "g643.t1"; gene_id "g643"; Scaffold_2 AUGUSTUS CDS 3001116 3001737 0.51 - 1 transcript_id "g643.t1"; gene_id "g643"; Scaffold_2 AUGUSTUS CDS 3002320 3002654 0.51 - 0 transcript_id "g643.t1"; gene_id "g643"; Scaffold_2 AUGUSTUS start_codon 3002652 3002654 . - 0 transcript_id "g643.t1"; gene_id "g643"; # protein sequence = [MEFYTPVSNLAIISISLTDNVAVFEAFPVIFIETRGFTITQQGLLFIGIGIGSVLTTFMNLYFAKQVNKIIPKWKGFP # PAELRLYSAMIGSVMLVIGSFWLGWTGNYASVPWSRSRSSNATVNPAQVEEAIEPLDDSRAVNAALLENIQHLTNTVSEVQYLLNEAISSQVASSQSQ # RELVDAIRQLRSSIHSRRDSVYSIGQDPITPQSSNQMPPIPELYAPPLQAPAPTKRPTTHEWSVRMGPIDLSAVSDLHGTALSFARMTRRGNQISPQV # RGRKGGPHILIMSWKTEEEARAFYEAWSEEPPADYATLSVVPNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g643 ### # start gene g644 Scaffold_2 AUGUSTUS gene 3006525 3008146 0.82 - . g644 Scaffold_2 AUGUSTUS transcript 3006525 3008146 0.82 - . g644.t1 Scaffold_2 AUGUSTUS stop_codon 3006525 3006527 . - 0 transcript_id "g644.t1"; gene_id "g644"; Scaffold_2 AUGUSTUS CDS 3006525 3006854 1 - 0 transcript_id "g644.t1"; gene_id "g644"; Scaffold_2 AUGUSTUS CDS 3006944 3008146 0.82 - 0 transcript_id "g644.t1"; gene_id "g644"; Scaffold_2 AUGUSTUS start_codon 3008144 3008146 . - 0 transcript_id "g644.t1"; gene_id "g644"; # protein sequence = [MDPPSITLASPPDTPLKFAPHVSETDGEKELTDREAPQSGSQSSSGSKHKRGMSSVDRLARIFNGPDGSSADPNSPAP # SNAPSNTSGSLLSPSTGSDKDVSLANSSAKKSRRNTLTVMVEPFKSTLKNRNKGRMTSTPMSSTPDADEKRGRDTSLQPRSAIATETSGYPSPNGQGQ # GMHASTNKAVKVMQWFRNKSKVRDSVTVGDPMRSTNALSEDEEKLASARATTPTQNKYREKNVITGDNMNQVNTSPAVVTTPRSASRTSNRPTRTAST # DTSTTTPSFVTRFRNSVTVGGGGGTVTERSHPKTPGGQLRTHHGAVDQSTVTTRPPPEVMKHVQAVLLAMGVEVQIESEFKFRCIRMKRKKMPGVPGS # GNVGFMGGSGNGLAAFNMVGSAASNGVSLNYSGSAGMLRGLLMRRQSSQVSAGVGSSYEDDTPNSSVVVSEGSAQDPLYGDSSEDVGDEVKFSVELTR # LSGLTDTYSLDIRRLKGNLRSYKFLYDSIRVYVFLCTINF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g644 ### # start gene g645 Scaffold_2 AUGUSTUS gene 3013689 3014144 0.96 + . g645 Scaffold_2 AUGUSTUS transcript 3013689 3014144 0.96 + . g645.t1 Scaffold_2 AUGUSTUS start_codon 3013689 3013691 . + 0 transcript_id "g645.t1"; gene_id "g645"; Scaffold_2 AUGUSTUS CDS 3013689 3014144 0.96 + 0 transcript_id "g645.t1"; gene_id "g645"; Scaffold_2 AUGUSTUS stop_codon 3014142 3014144 . + 0 transcript_id "g645.t1"; gene_id "g645"; # protein sequence = [MSNVNDFSSIDATRPSHHVHGSEDPLPGAKRGGVNPIDYSAETMERTPSTWNEGTERKFAQDHPEIMGAQPEQGQTHR # EHHHDHHDHHHEHHDRPQEGRNAFSEQRPMDVHPTSAGGVAVDGNSDLPEGKASMMDKVVGKTQKVFFNFLSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g645 ### # start gene g646 Scaffold_2 AUGUSTUS gene 3022592 3023245 0.72 - . g646 Scaffold_2 AUGUSTUS transcript 3022592 3023245 0.72 - . g646.t1 Scaffold_2 AUGUSTUS stop_codon 3022592 3022594 . - 0 transcript_id "g646.t1"; gene_id "g646"; Scaffold_2 AUGUSTUS CDS 3022592 3023245 0.72 - 0 transcript_id "g646.t1"; gene_id "g646"; Scaffold_2 AUGUSTUS start_codon 3023243 3023245 . - 0 transcript_id "g646.t1"; gene_id "g646"; # protein sequence = [MEVISKLTDPNSHVRVLALLIIRELLKSSDATIRFATRIVDAFSRQKHFQQLPEMEEDELEDTLTTKLAAQVVNKPNV # SRTTESLLYVAILSDIAALQPSGTEMGAVNWVHPESKPDPYASLLQQLYLFANTTMSGSPQARIHVIRTLFAKLGGEVGVFLSSIWLQFCCKSDTEDE # DISMLGSFALYHLAAFLQAHTITPSAGKAVVDFRFWFQWSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g646 ### # start gene g647 Scaffold_2 AUGUSTUS gene 3023312 3024015 0.6 - . g647 Scaffold_2 AUGUSTUS transcript 3023312 3024015 0.6 - . g647.t1 Scaffold_2 AUGUSTUS stop_codon 3023312 3023314 . - 0 transcript_id "g647.t1"; gene_id "g647"; Scaffold_2 AUGUSTUS CDS 3023312 3023925 0.62 - 2 transcript_id "g647.t1"; gene_id "g647"; Scaffold_2 AUGUSTUS CDS 3024003 3024015 0.61 - 0 transcript_id "g647.t1"; gene_id "g647"; Scaffold_2 AUGUSTUS start_codon 3024013 3024015 . - 0 transcript_id "g647.t1"; gene_id "g647"; # protein sequence = [MSSSHTNVRLSGVRSLLGLFQTADAGVDLKSIYEALSARVIDSDVGVIEALYDHSNGGRSFFDVVISTKDNATQYLEL # VSGVLFPAPPHPGSPASDATKPPKRPVVRAHLTFIVNKLASANPDWDSNWSNDVFHRLIFPYLLYSKPRGKTADAVWDILGEAKNSHAWIAGCAEAIS # SMAKGGEAERLQTLNAIMTGRIASAYAGDDFY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g647 ### # start gene g648 Scaffold_2 AUGUSTUS gene 3024698 3025648 0.86 - . g648 Scaffold_2 AUGUSTUS transcript 3024698 3025648 0.86 - . g648.t1 Scaffold_2 AUGUSTUS stop_codon 3024698 3024700 . - 0 transcript_id "g648.t1"; gene_id "g648"; Scaffold_2 AUGUSTUS CDS 3024698 3025648 0.86 - 0 transcript_id "g648.t1"; gene_id "g648"; Scaffold_2 AUGUSTUS start_codon 3025646 3025648 . - 0 transcript_id "g648.t1"; gene_id "g648"; # protein sequence = [MPTALASQLASQASQNAQILLDRSRTRGKHASVESYLFANGRDASEYDLDSIFALGRSGFEALATLNPRLSIYEENLF # SYHARNVDRTLLAAEAVRELDMALEGCLQELGAYLLEGAASKVLEWLVRRFRVNEFNVRALVALFLPYHETQNWGKMLTILHLDKEPMFKFLVPHQKQ # AQKPTSQADLVLPRKALVQAMLRNGDIARLVVRLLGEALKGHNDGLFSGGKFFRTLVAFWAATMHDFVLAHGSHGAKGMSEGTSALVFAAIIEPLSAI # PKFKTKSNSKSGKGERYDNVERDTIVSSSKYHLATTKIHIIT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g648 ### # start gene g649 Scaffold_2 AUGUSTUS gene 3027017 3027424 0.83 - . g649 Scaffold_2 AUGUSTUS transcript 3027017 3027424 0.83 - . g649.t1 Scaffold_2 AUGUSTUS stop_codon 3027017 3027019 . - 0 transcript_id "g649.t1"; gene_id "g649"; Scaffold_2 AUGUSTUS CDS 3027017 3027424 0.83 - 0 transcript_id "g649.t1"; gene_id "g649"; Scaffold_2 AUGUSTUS start_codon 3027422 3027424 . - 0 transcript_id "g649.t1"; gene_id "g649"; # protein sequence = [MNLETVAPTATLGHIVGELSGTWINELGSTVTLIADLEGGLSGQYNSAVGNALSFYNLTGRFDTLPPAGRGVSVGWVV # TWKNKYLNAHSTTTWSGQYFNKGGSETIITQWLLTGSTTPNNVWASTTIGHDEFIRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g649 ### # start gene g650 Scaffold_2 AUGUSTUS gene 3031904 3033094 0.56 + . g650 Scaffold_2 AUGUSTUS transcript 3031904 3033094 0.56 + . g650.t1 Scaffold_2 AUGUSTUS start_codon 3031904 3031906 . + 0 transcript_id "g650.t1"; gene_id "g650"; Scaffold_2 AUGUSTUS CDS 3031904 3033094 0.56 + 0 transcript_id "g650.t1"; gene_id "g650"; Scaffold_2 AUGUSTUS stop_codon 3033092 3033094 . + 0 transcript_id "g650.t1"; gene_id "g650"; # protein sequence = [MSEEHSSAISKRIESEVVTMKYVDTRTAIPIPHVLHYNAHAKEDVGSPYILMSKVDGVPLSSVWDDMDDDRRLIVLRQ # VIDILLELWSHRFDKKGALFDETDGSLCIRSSSLFVSPDNNGTRHRLQTTSYLHAADFWLAYANAQLYDIDESDFGSDIKPFTHSQAWFMRSLIPALF # DPSIDVHGFPLSPGDFHSQNIMIADANSSHPRITSIIDWEFSGPDFVSSFAQYPLFIVDHPHWKNDHPLRERNLRDQATFDRLIREAERRRDPVNDNV # KLSRLISNSYGIYLFQQAMYYPGMYSSVYPLLFAHVFGDDDDNNFSTDYYWALMENILNKDKQQFDRENGVWLEAREILGEEAVRPHLTRTEFIDLIL # KFEDRFDNGGSVSQWLTSLKQNVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g650 ### # start gene g651 Scaffold_2 AUGUSTUS gene 3035760 3036380 1 + . g651 Scaffold_2 AUGUSTUS transcript 3035760 3036380 1 + . g651.t1 Scaffold_2 AUGUSTUS start_codon 3035760 3035762 . + 0 transcript_id "g651.t1"; gene_id "g651"; Scaffold_2 AUGUSTUS CDS 3035760 3036380 1 + 0 transcript_id "g651.t1"; gene_id "g651"; Scaffold_2 AUGUSTUS stop_codon 3036378 3036380 . + 0 transcript_id "g651.t1"; gene_id "g651"; # protein sequence = [MLQPNAVNNVVAPPHPGRVSGPSSLRAPNQASASGTLNVEEKKGEAQVSMPVPDFSTTLEPVNDLKPIRPAQDRLSPK # LADVTTLCSSTSENVIAKSNQESSPQSTPFATTSSDVNTISEGKSTIVIDAASGDSSVSESEQDNVTQDSSTAESSTSAFTFSDPSTTARNISSSNNV # QPLVFSITYNHTHHHHHHHHHVHNHYHHAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g651 ### # start gene g652 Scaffold_2 AUGUSTUS gene 3037870 3038535 0.83 + . g652 Scaffold_2 AUGUSTUS transcript 3037870 3038535 0.83 + . g652.t1 Scaffold_2 AUGUSTUS start_codon 3037870 3037872 . + 0 transcript_id "g652.t1"; gene_id "g652"; Scaffold_2 AUGUSTUS CDS 3037870 3038535 0.83 + 0 transcript_id "g652.t1"; gene_id "g652"; Scaffold_2 AUGUSTUS stop_codon 3038533 3038535 . + 0 transcript_id "g652.t1"; gene_id "g652"; # protein sequence = [MLALSPARDLFALSSSTTKTPFSLDHHHSSALPSFPSYRQPPFVETPSQRRARVAFSRKEDNRQGEGKIVEERVESWV # REQVQQSTFMITTAARMSSENDKAVKGRLRILNRRQGGAPTLKPVPDEVVLRRMLKDSSNLLSSITEEEDEEPYILYSTPLPRYSTYPTPAPYYNSSP # PSPTRSSPIRSSPRSPATSPATSPTKPSHQRRFSDLQAIPEGLEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g652 ### # start gene g653 Scaffold_2 AUGUSTUS gene 3041766 3042398 0.74 + . g653 Scaffold_2 AUGUSTUS transcript 3041766 3042398 0.74 + . g653.t1 Scaffold_2 AUGUSTUS start_codon 3041766 3041768 . + 0 transcript_id "g653.t1"; gene_id "g653"; Scaffold_2 AUGUSTUS CDS 3041766 3041797 0.74 + 0 transcript_id "g653.t1"; gene_id "g653"; Scaffold_2 AUGUSTUS CDS 3041930 3042398 0.88 + 1 transcript_id "g653.t1"; gene_id "g653"; Scaffold_2 AUGUSTUS stop_codon 3042396 3042398 . + 0 transcript_id "g653.t1"; gene_id "g653"; # protein sequence = [MASMSSYLQRCSKALVPSRTSVELPPIMPALVNSNPPPPLLSWSEHSVTTELLDWAPLVIIDLAKFDQPGGKQELANE # LKDAVKLWGFWTVINTGISQEQLNRQLDIGYTFFKQPLAEKKKVACNFSEGKQVFLLGVSLVFQICLCFDPFMKLLWIPGALSTRWQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g653 ### # start gene g654 Scaffold_2 AUGUSTUS gene 3045171 3045548 0.73 - . g654 Scaffold_2 AUGUSTUS transcript 3045171 3045548 0.73 - . g654.t1 Scaffold_2 AUGUSTUS stop_codon 3045171 3045173 . - 0 transcript_id "g654.t1"; gene_id "g654"; Scaffold_2 AUGUSTUS CDS 3045171 3045548 0.73 - 0 transcript_id "g654.t1"; gene_id "g654"; Scaffold_2 AUGUSTUS start_codon 3045546 3045548 . - 0 transcript_id "g654.t1"; gene_id "g654"; # protein sequence = [MSSSPNPARQQQRQRQSSVHSRSRSRSTSSGPRQRGERKRPNRGNGLPGIDEADKGAIQRPGGNDGQPRQQPQQQQPQ # PPPKKTGEDEDGGGSGDKPLRLRLDLNLDVAVEIKARVHGDLTLSLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g654 ### # start gene g655 Scaffold_2 AUGUSTUS gene 3050168 3051177 0.42 + . g655 Scaffold_2 AUGUSTUS transcript 3050168 3051177 0.42 + . g655.t1 Scaffold_2 AUGUSTUS start_codon 3050168 3050170 . + 0 transcript_id "g655.t1"; gene_id "g655"; Scaffold_2 AUGUSTUS CDS 3050168 3050575 0.42 + 0 transcript_id "g655.t1"; gene_id "g655"; Scaffold_2 AUGUSTUS CDS 3050638 3051177 1 + 0 transcript_id "g655.t1"; gene_id "g655"; Scaffold_2 AUGUSTUS stop_codon 3051175 3051177 . + 0 transcript_id "g655.t1"; gene_id "g655"; # protein sequence = [MAPVIIVKAEDPPPVVQGPSISEIRAIQNAELEAIIAAAKAEKAEAESKAEAEAKAEEERRQRKERAKAEGSSSNGKK # RHRDREKAKKERRSEKDANKEVLKEKRLMKLISPIVVKSMSKHASALGHDRFKRHAKELTQKVAEREKKSSAYQQNKLDNLSDEKVAKIKKYAKEYID # KLLHRMDKEQGHRKPSSSASASVSAASTTPSGLVGSPSSAIGTPTSTTLPVDLAAVALDDAMDMDTDSELDEGEGDYDQEDDNVDMAGDEDGFRIEGQ # LQNGLYSEGVRNDPSIGSVEMEDMQAMRPNGQQSLEPSMVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g655 ### # start gene g656 Scaffold_2 AUGUSTUS gene 3051964 3053604 0.6 + . g656 Scaffold_2 AUGUSTUS transcript 3051964 3053604 0.6 + . g656.t1 Scaffold_2 AUGUSTUS start_codon 3051964 3051966 . + 0 transcript_id "g656.t1"; gene_id "g656"; Scaffold_2 AUGUSTUS CDS 3051964 3053604 0.6 + 0 transcript_id "g656.t1"; gene_id "g656"; Scaffold_2 AUGUSTUS stop_codon 3053602 3053604 . + 0 transcript_id "g656.t1"; gene_id "g656"; # protein sequence = [MISHKFAVKSKRSLPEKSIPKLSAGPDELIVDSPNVLLNARDSRKTIASLDEKTHEIPKPRRTSSRKTNAPANTRKGK # EIATQDAEEETEPDGTGKKNTRKGKSKAAGSYNRSSASVQGLLGFVSVTKPKDKKAPQTRSKAPQATARKSALNLTLPSENEQDSNEGDKTSDYPSSP # LAHRAKRRAATKIKNYTEDDTEHEVEDARHQKKASQAETKSAVSKHSTKIAQQRQKHADLQEVVVEDTIKQNTRPALTPVPEESEPESEAEREGIVAR # RAQDLARAISKTVEDFAPVSRDQVHTDKVLEKGLVVAKGRQRKKNAVVLEEKGKDFVVKSTLVNDEMEAASKQDQKNLDSTKVKGKRGATDEKNNITG # SSKSTESPKAARGGKGRGRTKTKAPDSLKENVIVSSLIEESEATVLPSPPRPLKRTRPIVEPEDVESIVSSRTRKKVRTIEKPTAVTNPPSTSRSRKG # KPTVPQEDEAVPYGIERNDKSSADASQNKRKRAVLTEAKDHEEASEHEPDKKKSKSRKTAQEKDPPPELNSSTKPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g656 ### # start gene g657 Scaffold_2 AUGUSTUS gene 3059065 3059735 0.55 + . g657 Scaffold_2 AUGUSTUS transcript 3059065 3059735 0.55 + . g657.t1 Scaffold_2 AUGUSTUS start_codon 3059065 3059067 . + 0 transcript_id "g657.t1"; gene_id "g657"; Scaffold_2 AUGUSTUS CDS 3059065 3059404 0.56 + 0 transcript_id "g657.t1"; gene_id "g657"; Scaffold_2 AUGUSTUS CDS 3059497 3059735 0.86 + 2 transcript_id "g657.t1"; gene_id "g657"; Scaffold_2 AUGUSTUS stop_codon 3059733 3059735 . + 0 transcript_id "g657.t1"; gene_id "g657"; # protein sequence = [MVNFALNHFRLSLKDSRRKDADGSGSDEEEEEEESEEESEEEEEEAEEADKSELSRAERKELKKKQAAEKMKQKQKQA # GGGGDDDSDDDSDLINPNHVKSKMNISDLSAPRELIEFLFSFLSKLHVAGKTDQAKADLSRLAKIRADREAAAEKRKAEAEGYFDMLSCMPSITDSSI # SIAKKSELEAKQKASR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g657 ### # start gene g658 Scaffold_2 AUGUSTUS gene 3060615 3061124 0.91 + . g658 Scaffold_2 AUGUSTUS transcript 3060615 3061124 0.91 + . g658.t1 Scaffold_2 AUGUSTUS start_codon 3060615 3060617 . + 0 transcript_id "g658.t1"; gene_id "g658"; Scaffold_2 AUGUSTUS CDS 3060615 3061124 0.91 + 0 transcript_id "g658.t1"; gene_id "g658"; Scaffold_2 AUGUSTUS stop_codon 3061122 3061124 . + 0 transcript_id "g658.t1"; gene_id "g658"; # protein sequence = [MGTSLTSLLHAEWLTELEYSSLSTTAAPTTPVAPAPDSFPVQTPSEINTPQSGDHHKHVGVPEGKHAHGKGKGKNFES # ASSTMKKGSHRAKSSTSDPTSNVDPAAGNTASQSSSDLTGSPGSAKGLDGMKQRRSFKSVMSDIDTGVKDVGNDVGGLVSSFLKREEFEEV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g658 ### # start gene g659 Scaffold_2 AUGUSTUS gene 3069724 3070535 0.86 + . g659 Scaffold_2 AUGUSTUS transcript 3069724 3070535 0.86 + . g659.t1 Scaffold_2 AUGUSTUS start_codon 3069724 3069726 . + 0 transcript_id "g659.t1"; gene_id "g659"; Scaffold_2 AUGUSTUS CDS 3069724 3069727 0.92 + 0 transcript_id "g659.t1"; gene_id "g659"; Scaffold_2 AUGUSTUS CDS 3069781 3070535 0.91 + 2 transcript_id "g659.t1"; gene_id "g659"; Scaffold_2 AUGUSTUS stop_codon 3070533 3070535 . + 0 transcript_id "g659.t1"; gene_id "g659"; # protein sequence = [MPDENGRPAGFSNIEFENAEDAESFYRAAADSSLSFAGRKARIELFDKPQKEVVRTWPQRGPSPPSNTIFIGHIPHDI # ADADLRELFIPYGNIVRISLGADCHSCCPSYIIHLYPLTGRDSSGARRGFAHVEFETTEDASAALNALKNQHDTILGQEVHLDFAPSKPKNVHPPSSK # LYFAQYDGTLQEMQDALRKHSGVLDVVMRTSRTVLAIVSMISSPGAHSKESEWYRSIQKRRRSHGREAGSRQNQDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g659 ### # start gene g660 Scaffold_2 AUGUSTUS gene 3072027 3072758 0.79 + . g660 Scaffold_2 AUGUSTUS transcript 3072027 3072758 0.79 + . g660.t1 Scaffold_2 AUGUSTUS start_codon 3072027 3072029 . + 0 transcript_id "g660.t1"; gene_id "g660"; Scaffold_2 AUGUSTUS CDS 3072027 3072758 0.79 + 0 transcript_id "g660.t1"; gene_id "g660"; Scaffold_2 AUGUSTUS stop_codon 3072756 3072758 . + 0 transcript_id "g660.t1"; gene_id "g660"; # protein sequence = [MFVPNSVESNRYSLTFGHAQEIIISLFATSLLAIEHEGIESKKWAWLLKRRMLESDSELASSRDTMHSSTRGPEHAPI # PSTLNRVCEREFQDTDSISFTDVDHRHRAKTPDFDKWKVVTYQTPIGEAVSRDPYINDGHYAEPTDLLPARNTEFQEVRRTKNESLRHGTKTVGSHYP # GQQSSSNVPETPHSRTLKRTEPMEVLVASTDVIQPQSRPESGLRRAQRSPENQSLGWKGEFIGNSFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g660 ### # start gene g661 Scaffold_2 AUGUSTUS gene 3073767 3073943 0.89 + . g661 Scaffold_2 AUGUSTUS transcript 3073767 3073943 0.89 + . g661.t1 Scaffold_2 AUGUSTUS start_codon 3073767 3073769 . + 0 transcript_id "g661.t1"; gene_id "g661"; Scaffold_2 AUGUSTUS CDS 3073767 3073943 0.89 + 0 transcript_id "g661.t1"; gene_id "g661"; Scaffold_2 AUGUSTUS stop_codon 3073941 3073943 . + 0 transcript_id "g661.t1"; gene_id "g661"; # protein sequence = [MNSVVEDGVGGLGIGSGFDSSSAEDDAEAATDSDVGATSGVGGRSATVGIGGGVGGYE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g661 ### # start gene g662 Scaffold_2 AUGUSTUS gene 3083242 3083604 0.92 - . g662 Scaffold_2 AUGUSTUS transcript 3083242 3083604 0.92 - . g662.t1 Scaffold_2 AUGUSTUS stop_codon 3083242 3083244 . - 0 transcript_id "g662.t1"; gene_id "g662"; Scaffold_2 AUGUSTUS CDS 3083242 3083604 0.92 - 0 transcript_id "g662.t1"; gene_id "g662"; Scaffold_2 AUGUSTUS start_codon 3083602 3083604 . - 0 transcript_id "g662.t1"; gene_id "g662"; # protein sequence = [MAIVLPQLGPWAESHIQAITQATTQESFNEAFDAFVTKDESHLEIIFNGVSVTRDEYKARLKGEAFDEAGASVQFNGI # ATVPGKDDNVTSNVSPPFHTLSELRLSRVSSMYSTNSTLVHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g662 ### # start gene g663 Scaffold_2 AUGUSTUS gene 3086015 3086272 0.78 - . g663 Scaffold_2 AUGUSTUS transcript 3086015 3086272 0.78 - . g663.t1 Scaffold_2 AUGUSTUS stop_codon 3086015 3086017 . - 0 transcript_id "g663.t1"; gene_id "g663"; Scaffold_2 AUGUSTUS CDS 3086015 3086272 0.78 - 0 transcript_id "g663.t1"; gene_id "g663"; Scaffold_2 AUGUSTUS start_codon 3086270 3086272 . - 0 transcript_id "g663.t1"; gene_id "g663"; # protein sequence = [MDGWDGDDNDREGDLVDNDEAESEGESESEGEDDVVDGDEDVDDLSSSSCSEPVPSLLHKKQPSSTHVSPNATCSCTP # TQFLHRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g663 ### # start gene g664 Scaffold_2 AUGUSTUS gene 3087361 3088299 0.12 + . g664 Scaffold_2 AUGUSTUS transcript 3087361 3088299 0.12 + . g664.t1 Scaffold_2 AUGUSTUS start_codon 3087361 3087363 . + 0 transcript_id "g664.t1"; gene_id "g664"; Scaffold_2 AUGUSTUS CDS 3087361 3087502 0.95 + 0 transcript_id "g664.t1"; gene_id "g664"; Scaffold_2 AUGUSTUS CDS 3087557 3087720 0.83 + 2 transcript_id "g664.t1"; gene_id "g664"; Scaffold_2 AUGUSTUS CDS 3087769 3088299 0.15 + 0 transcript_id "g664.t1"; gene_id "g664"; Scaffold_2 AUGUSTUS stop_codon 3088297 3088299 . + 0 transcript_id "g664.t1"; gene_id "g664"; # protein sequence = [MSQANSTNQDNREQNVPQSQGKTGRDIKKPEVDQSMLGINSYHSPNTGGRSFDYMEKYADEPFGEELKDNSRVFKVYL # DEAEIFDDDMIRGFRETIDSLLVFAALFSGVVTSFVIATISALQPDYSQITAVLLVEQVQILRAAGNATAINAIPKSTVDLQNVSVATEDLWINGLFL # ASLSLALATALLSVLVKQWLQAYSSILAGCAKQKALIRQFRYAGFEKWKVPEIVGILPLILHTSLALFLIGLSLYISELHSSLSWIVVTVTILAFAFY # LEVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g664 ### # start gene g665 Scaffold_2 AUGUSTUS gene 3088725 3089848 0.06 + . g665 Scaffold_2 AUGUSTUS transcript 3088725 3089848 0.06 + . g665.t1 Scaffold_2 AUGUSTUS start_codon 3088725 3088727 . + 0 transcript_id "g665.t1"; gene_id "g665"; Scaffold_2 AUGUSTUS CDS 3088725 3088864 0.06 + 0 transcript_id "g665.t1"; gene_id "g665"; Scaffold_2 AUGUSTUS CDS 3088948 3089848 0.47 + 1 transcript_id "g665.t1"; gene_id "g665"; Scaffold_2 AUGUSTUS stop_codon 3089846 3089848 . + 0 transcript_id "g665.t1"; gene_id "g665"; # protein sequence = [MWATLSKFHESDFKKLNFQVSLIFEAFSTTPYWDHFKRAQWIIGTILFGIDKEWKNNALLKAVSNNDLETTKVLVKNK # ADVNAQGGQFGNALYAAAYQENLDIVKFLVGNKADVSAQGGIFGNALQAAVYRGNLEIAKFLLENKADVNAQGGLYGNALQTAAYQGNLEIAKFLVEN # KADVNAQRGRFGNALQAAARQGNLDIIKFLVENKADVNAQGGRFGNPLQAAAYQGNLEVAKLLVENEADVNAQGTFGSALDAAAIHGNLDIVKFLVEE # KNVDVNAPQGIHETSLQAAACYGHLHIVKYLAGHSAIVMTQELFATALQAAEIGEHEDVVKFLRSIQPNLQK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g665 ### # start gene g666 Scaffold_2 AUGUSTUS gene 3100652 3101818 0.84 + . g666 Scaffold_2 AUGUSTUS transcript 3100652 3101818 0.84 + . g666.t1 Scaffold_2 AUGUSTUS start_codon 3100652 3100654 . + 0 transcript_id "g666.t1"; gene_id "g666"; Scaffold_2 AUGUSTUS CDS 3100652 3101818 0.84 + 0 transcript_id "g666.t1"; gene_id "g666"; Scaffold_2 AUGUSTUS stop_codon 3101816 3101818 . + 0 transcript_id "g666.t1"; gene_id "g666"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDFAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g666 ### # start gene g667 Scaffold_2 AUGUSTUS gene 3101869 3103302 0.93 + . g667 Scaffold_2 AUGUSTUS transcript 3101869 3103302 0.93 + . g667.t1 Scaffold_2 AUGUSTUS start_codon 3101869 3101871 . + 0 transcript_id "g667.t1"; gene_id "g667"; Scaffold_2 AUGUSTUS CDS 3101869 3103302 0.93 + 0 transcript_id "g667.t1"; gene_id "g667"; Scaffold_2 AUGUSTUS stop_codon 3103300 3103302 . + 0 transcript_id "g667.t1"; gene_id "g667"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g667 ### # start gene g668 Scaffold_2 AUGUSTUS gene 3114579 3115064 0.37 - . g668 Scaffold_2 AUGUSTUS transcript 3114579 3115064 0.37 - . g668.t1 Scaffold_2 AUGUSTUS stop_codon 3114579 3114581 . - 0 transcript_id "g668.t1"; gene_id "g668"; Scaffold_2 AUGUSTUS CDS 3114579 3114793 0.44 - 2 transcript_id "g668.t1"; gene_id "g668"; Scaffold_2 AUGUSTUS CDS 3114881 3115064 0.42 - 0 transcript_id "g668.t1"; gene_id "g668"; Scaffold_2 AUGUSTUS start_codon 3115062 3115064 . - 0 transcript_id "g668.t1"; gene_id "g668"; # protein sequence = [MTSKSGTQSQSQPKSKSKSQSQPKSQSKSQSNPNPHTQPGPLTINQLMLNSDSDEDDGRMGRGEEEEEEEENGSSSGS # HNKAKAKADEYDDRGGRGRRTHSPSPQHTHTPPSPSRCNAVHVPCCGGYGHGDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g668 ### # start gene g669 Scaffold_2 AUGUSTUS gene 3116226 3116621 0.57 - . g669 Scaffold_2 AUGUSTUS transcript 3116226 3116621 0.57 - . g669.t1 Scaffold_2 AUGUSTUS stop_codon 3116226 3116228 . - 0 transcript_id "g669.t1"; gene_id "g669"; Scaffold_2 AUGUSTUS CDS 3116226 3116621 0.57 - 0 transcript_id "g669.t1"; gene_id "g669"; Scaffold_2 AUGUSTUS start_codon 3116619 3116621 . - 0 transcript_id "g669.t1"; gene_id "g669"; # protein sequence = [MRERVGEGNREGWRWRWGDGGRESEREKVVENVIHFVCGRGEYTKKEKDRRGSKDDRDNRDKIETMEETMETRKGQWR # QERKVRKERNVGKERDIRKERKVRKERDVGKERDVGKERDVGIIRQRMFEDDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g669 ### # start gene g670 Scaffold_2 AUGUSTUS gene 3133008 3134610 0.37 - . g670 Scaffold_2 AUGUSTUS transcript 3133008 3134610 0.37 - . g670.t1 Scaffold_2 AUGUSTUS stop_codon 3133008 3133010 . - 0 transcript_id "g670.t1"; gene_id "g670"; Scaffold_2 AUGUSTUS CDS 3133008 3134307 0.68 - 1 transcript_id "g670.t1"; gene_id "g670"; Scaffold_2 AUGUSTUS CDS 3134453 3134610 0.39 - 0 transcript_id "g670.t1"; gene_id "g670"; Scaffold_2 AUGUSTUS start_codon 3134608 3134610 . - 0 transcript_id "g670.t1"; gene_id "g670"; # protein sequence = [MGTWVSSAQVLHMRSEFPMQRTQHPPWFLIDSTPLKVEPKRIILTTGFTVYVPLPLILESIFPQLQPLSQEVEKQEEL # FLDALYYCVPTPRALRLFLEPLLLKKQLEEQSLEPEQDSEQTPLVQKVQLLEFGQTASETEQTPVNYPANNDYVRAVVHAIERLNTLRDLAKILEIRA # EAGYANEISHQLLRIYRSELRGSPSSRYVKIASDTAYVDFASPWVGEELLRRHNEWQFSDLCEFYHKISETSDLAVAAGVMFECLFIKRIITPSLTNL # RFGLYSALNTLPKRQTRKRAKIPHTRFIGSTLASPSSKSALHCSNSEANEVDKLDPPDGDDTKEDDGDTENSNTSSIPQPRWDGAFSLNRFHMIQEVE # PVLCTLHIPYKRNNPLFDALLLQEDSPSCITLWVIQVTAAKERGGASARYNNVKDIYNKSVEKYGDGNVRVGYMLLVPPRHQQVEWTFEDIHLLPENL # RPSNGNVYGSSFRSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g670 ### # start gene g671 Scaffold_2 AUGUSTUS gene 3139768 3140903 0.59 - . g671 Scaffold_2 AUGUSTUS transcript 3139768 3140903 0.59 - . g671.t1 Scaffold_2 AUGUSTUS stop_codon 3139768 3139770 . - 0 transcript_id "g671.t1"; gene_id "g671"; Scaffold_2 AUGUSTUS CDS 3139768 3140275 0.83 - 1 transcript_id "g671.t1"; gene_id "g671"; Scaffold_2 AUGUSTUS CDS 3140563 3140903 0.59 - 0 transcript_id "g671.t1"; gene_id "g671"; Scaffold_2 AUGUSTUS start_codon 3140901 3140903 . - 0 transcript_id "g671.t1"; gene_id "g671"; # protein sequence = [MVSTHMKAVVKTGVGKVALKTTEIPKPGRGQVLVQIYAAAQNPSDCMFSLCLFSKQTDATLEGMKLKRDWPVDSVIAG # HDFAGVIQQLGLDVPSESRQIGQRVAGFLNGCGSAYERFPKILVWGGASAVGQFVIQLAKQSGLQVITTASPQNHELLRKLGADTVFDYRDPKVISNI # KTFCGDKQLRVAIDCVSVDESVSLVTQCIEDCEDSYIALVLPVEVKTKYIRSDFTYAYTLLGKVSQMVMFSGGWMKIGQLSSQSRENTPTQLFLNILS # LENGVRLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g671 ### # start gene g672 Scaffold_2 AUGUSTUS gene 3141617 3142171 0.9 - . g672 Scaffold_2 AUGUSTUS transcript 3141617 3142171 0.9 - . g672.t1 Scaffold_2 AUGUSTUS stop_codon 3141617 3141619 . - 0 transcript_id "g672.t1"; gene_id "g672"; Scaffold_2 AUGUSTUS CDS 3141617 3142171 0.9 - 0 transcript_id "g672.t1"; gene_id "g672"; Scaffold_2 AUGUSTUS start_codon 3142169 3142171 . - 0 transcript_id "g672.t1"; gene_id "g672"; # protein sequence = [MEDSPEPVENGVLPSFKEDEPESTDADDGHHSEEEGLMGKLQDGLPVAPASMLSARGSESPHESNDEADDDDDDYVDE # EDPNNDDDDDDEDYLEPHVHSVVPPKMARNRHVGTMSERPLTRRQRKKLGLPKPRNIPMSGKGVGKIVIPGGKSTNSLSRDTSSTAEWTANGNGRVDV # RGFRELKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g672 ### # start gene g673 Scaffold_2 AUGUSTUS gene 3142786 3144055 0.46 - . g673 Scaffold_2 AUGUSTUS transcript 3142786 3144055 0.46 - . g673.t1 Scaffold_2 AUGUSTUS stop_codon 3142786 3142788 . - 0 transcript_id "g673.t1"; gene_id "g673"; Scaffold_2 AUGUSTUS CDS 3142786 3143350 0.58 - 1 transcript_id "g673.t1"; gene_id "g673"; Scaffold_2 AUGUSTUS CDS 3143472 3144055 0.57 - 0 transcript_id "g673.t1"; gene_id "g673"; Scaffold_2 AUGUSTUS start_codon 3144053 3144055 . - 0 transcript_id "g673.t1"; gene_id "g673"; # protein sequence = [MRPLVKKSNIQLLTSDPLQNTVQLNNQLRSLGLYAAPTIGDGNCLFRALSDQQYGSPSRHVEVRREICDFIEAHPERY # EGFVDVDEFGESGVRKEKGSGLSAYVAGMRQNATYGGHMELSAFAHLTKRNIKVVQPGLVYVIQCDPAQPKSPKPASKKAGDSPSKYTRSGSSRELDG # DGDSPMSPGEGQDSTIYVAYHDWEHFSSVRNLRGPHTGIPQVCEMAPPSAGSSSSASPPPEERLPPSKARKKERERKEKEKKEAGRLKAKEKATPHTA # HGSVDKPKSRVKNSSSTQQTTGFKLKIPPRSLPTPPTLYMTAATPISAGASPLSSLPPSPIEESDGFLDATTIPLPTSVSHSVATTPTRFTLTFSSTC # FKLRATHFGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g673 ### # start gene g674 Scaffold_2 AUGUSTUS gene 3162150 3162356 0.49 - . g674 Scaffold_2 AUGUSTUS transcript 3162150 3162356 0.49 - . g674.t1 Scaffold_2 AUGUSTUS stop_codon 3162150 3162152 . - 0 transcript_id "g674.t1"; gene_id "g674"; Scaffold_2 AUGUSTUS CDS 3162150 3162356 0.49 - 0 transcript_id "g674.t1"; gene_id "g674"; Scaffold_2 AUGUSTUS start_codon 3162354 3162356 . - 0 transcript_id "g674.t1"; gene_id "g674"; # protein sequence = [MYAKNGAFLPVGATLTRPKLAHALEIIAEEGADIFYEGQLAKDLVEAVAAEGGVMTLNDLKSAYYLFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g674 ### # start gene g675 Scaffold_2 AUGUSTUS gene 3165499 3166017 0.48 - . g675 Scaffold_2 AUGUSTUS transcript 3165499 3166017 0.48 - . g675.t1 Scaffold_2 AUGUSTUS stop_codon 3165499 3165501 . - 0 transcript_id "g675.t1"; gene_id "g675"; Scaffold_2 AUGUSTUS CDS 3165499 3166017 0.48 - 0 transcript_id "g675.t1"; gene_id "g675"; Scaffold_2 AUGUSTUS start_codon 3166015 3166017 . - 0 transcript_id "g675.t1"; gene_id "g675"; # protein sequence = [MLAVCLSFIRKRKLRLISQDDWFSSSVNVPGIRMVDAAEGVLGIEWIEGQSVRKLLPGGAEDDGPDNVESPDVEDLDP # LTEYGVSVGTSVKPFCLYLFLTERSTHSDEVMNLIGNEIAKMHCVDVIHGDLTTSNMMLRHPKSFVPFNPNVTTELVRFMLLALSAIVRTKLTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g675 ### # start gene g676 Scaffold_2 AUGUSTUS gene 3177979 3179440 0.87 - . g676 Scaffold_2 AUGUSTUS transcript 3177979 3179440 0.87 - . g676.t1 Scaffold_2 AUGUSTUS stop_codon 3177979 3177981 . - 0 transcript_id "g676.t1"; gene_id "g676"; Scaffold_2 AUGUSTUS CDS 3177979 3178623 0.88 - 0 transcript_id "g676.t1"; gene_id "g676"; Scaffold_2 AUGUSTUS CDS 3178775 3179440 0.99 - 0 transcript_id "g676.t1"; gene_id "g676"; Scaffold_2 AUGUSTUS start_codon 3179438 3179440 . - 0 transcript_id "g676.t1"; gene_id "g676"; # protein sequence = [MKEKIKSLCYDFLLRSRLEGWLGNDENEYIVHGFARVKMTGVLKHIRIDEPLVMMACAIWLNGSLESDAHSLYKYVAN # RIQDHNPSTGRNGFEEFICFYLQQVFQKPRRLGQVFNLPDKQNPEKDSALAKKRATLVTLHIDEVGSQRKLTEGTTDIQNIGEAKLPGALGLGVQSMD # ECVPLTDWVKLKGHTAFCFPMNEMGPDIMCFLKLEDDKGDPEDFTYINFLAQVKDIKGATGREEKRKGVREGLLSALEGLPRKDPLAGKYGVIRIICG # FPVRVDLDTIFYQHKEQRKTPRHILDPDEEDEHPLGKLDVEFLTTETAQLHPTDLLSVIKARAQNEKKKGKSFWSTFDPAILWSDSEEEEEQESQKRQ # HRMLVQAQSFELDNHSRMIIEMLRSDYARSRGLDLPPRARKRKHDTLKTDLDLSDYEGDNESED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g676 ### # start gene g677 Scaffold_2 AUGUSTUS gene 3180091 3180432 0.7 - . g677 Scaffold_2 AUGUSTUS transcript 3180091 3180432 0.7 - . g677.t1 Scaffold_2 AUGUSTUS stop_codon 3180091 3180093 . - 0 transcript_id "g677.t1"; gene_id "g677"; Scaffold_2 AUGUSTUS CDS 3180091 3180432 0.7 - 0 transcript_id "g677.t1"; gene_id "g677"; Scaffold_2 AUGUSTUS start_codon 3180430 3180432 . - 0 transcript_id "g677.t1"; gene_id "g677"; # protein sequence = [MEHFASTSEGREFSQALDNNNQLVSCGVLSMLLARFLVLRQFLANLIEMGEDISEPLHMRNWLQIQLHPDILLRPDES # GDIFDQLRDHIMGMIDFSLPVNELGLEEFANRSPV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g677 ### # start gene g678 Scaffold_2 AUGUSTUS gene 3183398 3184264 0.84 - . g678 Scaffold_2 AUGUSTUS transcript 3183398 3184264 0.84 - . g678.t1 Scaffold_2 AUGUSTUS stop_codon 3183398 3183400 . - 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_2 AUGUSTUS CDS 3183398 3184264 0.84 - 0 transcript_id "g678.t1"; gene_id "g678"; Scaffold_2 AUGUSTUS start_codon 3184262 3184264 . - 0 transcript_id "g678.t1"; gene_id "g678"; # protein sequence = [MYLKACLKVGFSHHQRRRWLELQIFPFDLTSAFDPFGKIKNSLSYLHLPDSVLDEAISCTLEDIQSIWDMPPGEYLYI # ALDEANVASTKHRWAFSDEYGRYPILKEMLRALRRRLGHLPVKFVVAGTMIPPEHFQSAIGEWDDFRWCSDTGSFDDSEAHRRYVSQFLPSELVSSVT # GQTLLDRSCNGYVGGHYVNSSLYLANESSRHRYTASFITVLLGSSFESPHSLLGSYIEKISNYSPHDNAEYTSGESFLFDKWHTSLGDSGLRDGMYRI # KPSMFSLLLHFLFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g678 ### # start gene g679 Scaffold_2 AUGUSTUS gene 3188774 3189613 0.96 + . g679 Scaffold_2 AUGUSTUS transcript 3188774 3189613 0.96 + . g679.t1 Scaffold_2 AUGUSTUS start_codon 3188774 3188776 . + 0 transcript_id "g679.t1"; gene_id "g679"; Scaffold_2 AUGUSTUS CDS 3188774 3189613 0.96 + 0 transcript_id "g679.t1"; gene_id "g679"; Scaffold_2 AUGUSTUS stop_codon 3189611 3189613 . + 0 transcript_id "g679.t1"; gene_id "g679"; # protein sequence = [MVRSRSEDIIKGHDARTPTKTSIDSPKPLLFYVRKAQERIKAQQPTRWRPKGYESLVGELNGTGSRCITPVEEHKVVE # RVAKTEWPPRAPSPSLLPDPAEVFGKCENVFGKCENVFGKCENVFGISGNKGKIYAEFSPSSYFQSCGPATENRVIPPSSDRRKESVIVPKLDIMSSD # LTKFLQREHASLLRRYRDSSEWFPDVAEPDQDTHYASAGLKGIDILTLGDAMTAERPRRRTRSLGDTFASDVTVPEVKCPRPVRAHSFLSVEGQLLRF # HVGFK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g679 ### # start gene g680 Scaffold_2 AUGUSTUS gene 3190055 3190876 0.91 + . g680 Scaffold_2 AUGUSTUS transcript 3190055 3190876 0.91 + . g680.t1 Scaffold_2 AUGUSTUS start_codon 3190055 3190057 . + 0 transcript_id "g680.t1"; gene_id "g680"; Scaffold_2 AUGUSTUS CDS 3190055 3190876 0.91 + 0 transcript_id "g680.t1"; gene_id "g680"; Scaffold_2 AUGUSTUS stop_codon 3190874 3190876 . + 0 transcript_id "g680.t1"; gene_id "g680"; # protein sequence = [MDSQDKYLRRSSSSSAIDLTRTPAGIASSAPPSPSLEPSNNNSRRRTSWGKVDLGQDPLQLDTQPGATNSAHYTVHDD # PFQDSPTDDRSFAPIPFATTTQYDAQPEEDYTISYYTTAQAGPSTTSLLDMDGTREDDQARLTTNMSRNPTERWREEFGETDMERTAGALSPRAKRRT # VRYNASPSPLKKTGSALKTVSKSLRRASLRVVNFGNSALENQVRLPTMIARRTKKLRMMNHYQTSVQDYPYVDVRFVFSDLVTSYDCGCIVGSYTRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g680 ### # start gene g681 Scaffold_2 AUGUSTUS gene 3193184 3195137 0.16 + . g681 Scaffold_2 AUGUSTUS transcript 3193184 3195137 0.16 + . g681.t1 Scaffold_2 AUGUSTUS start_codon 3193184 3193186 . + 0 transcript_id "g681.t1"; gene_id "g681"; Scaffold_2 AUGUSTUS CDS 3193184 3193358 0.41 + 0 transcript_id "g681.t1"; gene_id "g681"; Scaffold_2 AUGUSTUS CDS 3193492 3193775 0.22 + 2 transcript_id "g681.t1"; gene_id "g681"; Scaffold_2 AUGUSTUS CDS 3193857 3193999 0.85 + 0 transcript_id "g681.t1"; gene_id "g681"; Scaffold_2 AUGUSTUS CDS 3194048 3195137 0.98 + 1 transcript_id "g681.t1"; gene_id "g681"; Scaffold_2 AUGUSTUS stop_codon 3195135 3195137 . + 0 transcript_id "g681.t1"; gene_id "g681"; # protein sequence = [MSLFLILVNFLAALVSSQLLRGDMSSNDAVNFGQLYNAFLAVYQVFSSENWTDVLYNAVIVLQMFIAVINENFDVAEE # QKRSQQATHYWSTHQVQAGKATWVRRLNPYRWFKANPVKVQVENLPSSLVLPMQQALVQDYTSGTDNRPIDVSFTHYTTKSLSALQKLFGGDERADDV # PLATLKHNRSETLGALGDEETERHLELLASVNPEAVNSNDLNDALFERRAQKADFIRDHPTYDKTFWIFSQKDPIRRFCQRLVQPAHGERIFGVPTSH # VAHPIFQVIIFLAVIGGIVTEIIATPVYRRNYYATNGRIRGAWFDLTEATFGFVLLLEFIIKVIADGFLFTPNAYIRSIWNVIDFVILSGILVNVTTG # LIFIGGLSRFTRSLKALRALRLITLFDRMRNSFQSLIISGASRIFDAALLAILYMVPYAVWGLNIFAGKLNTCNDNNAAGMDDCTNEYVNSYINDAFG # YPVPRVWDNPAPSTKFSFDNFGSSLLILFEIVSLEGWVDVMQAAASAVGDGLQPQTNASQWNALFFLIYNLLGGVVILTLFVRYVCQKVKTKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g681 ### # start gene g682 Scaffold_2 AUGUSTUS gene 3200688 3201734 0.25 + . g682 Scaffold_2 AUGUSTUS transcript 3200688 3201734 0.25 + . g682.t1 Scaffold_2 AUGUSTUS start_codon 3200688 3200690 . + 0 transcript_id "g682.t1"; gene_id "g682"; Scaffold_2 AUGUSTUS CDS 3200688 3201734 0.25 + 0 transcript_id "g682.t1"; gene_id "g682"; Scaffold_2 AUGUSTUS stop_codon 3201732 3201734 . + 0 transcript_id "g682.t1"; gene_id "g682"; # protein sequence = [MSDTLFRYRFTAEFVSLVLQCGYQSMHEILNQYINNMAGFLPADCGGSEVDFQGIVRFPGLAFGFDRLNEQMKEKIKT # VAHGYLLTSKIDTVFGEDETEYIEYGLARILSKQGRKSIRIDEPLVLLSCSIWFNHQPAHTLYKTVTDNIQDHNPSTGRNGFEEFIALYLLNVFQTPT # QLKDVFDFSGVAGKLNDQGLENKLATLVTLHLDDNAGSSELVEGKICLFGDPRLSGPIGLGIASNGNPVLNDWLNLKRHTAFCFPMNAMGPDILCFLK # LEDMANSDFTYVCLAIQCKFHRAEKDLAPLTLRKAVATITPEEFFERRVSPFRFSYMPVANADSSSENIRHYNQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g682 ### # start gene g683 Scaffold_2 AUGUSTUS gene 3207884 3208576 0.99 + . g683 Scaffold_2 AUGUSTUS transcript 3207884 3208576 0.99 + . g683.t1 Scaffold_2 AUGUSTUS start_codon 3207884 3207886 . + 0 transcript_id "g683.t1"; gene_id "g683"; Scaffold_2 AUGUSTUS CDS 3207884 3208202 0.99 + 0 transcript_id "g683.t1"; gene_id "g683"; Scaffold_2 AUGUSTUS CDS 3208332 3208576 1 + 2 transcript_id "g683.t1"; gene_id "g683"; Scaffold_2 AUGUSTUS stop_codon 3208574 3208576 . + 0 transcript_id "g683.t1"; gene_id "g683"; # protein sequence = [MARGSSSTQTRSQKTNTVKYGRASQGSSQTQPKRGTRAQRVDSEEENDGNADADGAYDEEIDVEGGGGGASQEGVDIN # LKANQLVRLALFMEHKRMPLRRDEISRKVFGPSSRASRSFNRVFERAQSILNHTFGMELVELQSRAAMDKTAAAADPSALNEESEEDDGAPPATQGKR # RGKATGLKKKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g683 ### # start gene g684 Scaffold_2 AUGUSTUS gene 3208996 3209463 1 + . g684 Scaffold_2 AUGUSTUS transcript 3208996 3209463 1 + . g684.t1 Scaffold_2 AUGUSTUS start_codon 3208996 3208998 . + 0 transcript_id "g684.t1"; gene_id "g684"; Scaffold_2 AUGUSTUS CDS 3208996 3209463 1 + 0 transcript_id "g684.t1"; gene_id "g684"; Scaffold_2 AUGUSTUS stop_codon 3209461 3209463 . + 0 transcript_id "g684.t1"; gene_id "g684"; # protein sequence = [MGASVPLGRSAHNHSSGTGGTATFTIEAYLQLLIRQGYIDRVVSGEAGKPAKAAGGKRGRLSTAGGNLDGEEGENKYE # WRWGPRAHSEIGEKAVQEFVAEFMVGIGSNEDDQDGSGSRGGRRSGGSNRAQDNAAKLKKMMDGIEKASGGNIVDLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g684 ### # start gene g685 Scaffold_2 AUGUSTUS gene 3212479 3213063 0.68 - . g685 Scaffold_2 AUGUSTUS transcript 3212479 3213063 0.68 - . g685.t1 Scaffold_2 AUGUSTUS stop_codon 3212479 3212481 . - 0 transcript_id "g685.t1"; gene_id "g685"; Scaffold_2 AUGUSTUS CDS 3212479 3213063 0.68 - 0 transcript_id "g685.t1"; gene_id "g685"; Scaffold_2 AUGUSTUS start_codon 3213061 3213063 . - 0 transcript_id "g685.t1"; gene_id "g685"; # protein sequence = [MGYSQGGFILIALLLRNDLTSGVNGIGHQTARGLAQSGFGDDLLSAYQLFSEDLQQLSQAFQKLNEDMVYEIEHNKRG # KMGSRSPIRAGIFRDSKFPMVADIPALDAFLRPATSSSRGLPLAQSSLRLPTLPDIPGITKFCTTYFAWSEKLTLEHLHTYLWSGVVMRMLCSVSDQQ # IPSVHTTNDISEIHRLQF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g685 ### # start gene g686 Scaffold_2 AUGUSTUS gene 3216006 3217117 0.34 + . g686 Scaffold_2 AUGUSTUS transcript 3216006 3217117 0.34 + . g686.t1 Scaffold_2 AUGUSTUS start_codon 3216006 3216008 . + 0 transcript_id "g686.t1"; gene_id "g686"; Scaffold_2 AUGUSTUS CDS 3216006 3216427 0.34 + 0 transcript_id "g686.t1"; gene_id "g686"; Scaffold_2 AUGUSTUS CDS 3216481 3217117 0.34 + 1 transcript_id "g686.t1"; gene_id "g686"; Scaffold_2 AUGUSTUS stop_codon 3217115 3217117 . + 0 transcript_id "g686.t1"; gene_id "g686"; # protein sequence = [MAAEDAGEPLDDGEVEFEDDEVDEEFCAEPAPPTNLSNSPPLTSRHDKKYAKLRKRSRAKRAAEAVERVVSRGVKPFV # VELAKGALPLELEDFDASTLPVSSSGWNANPCKKLSPGLQRVWKNLEALSTLSGLKLLRWDGQACIVLIDAHDRIIAVLGGVPHGSKGKEWQAVEAEA # TAAAMRCREASTFTEAQKHGRRGDFASRTVGYGYGNGRRKPQNYKVSGSANQNAMQELLQNQAIRRISGFQNGMCCMPLFLKISSLTEPLALFNTFCH # KNYAEYRDTNDDIQLKQPELRANFPNTAFAATTFNLGPSHSLHLTWTLTTAPPAGAPTPTWDPSTLTKADTLCFGTLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g686 ### # start gene g687 Scaffold_2 AUGUSTUS gene 3219479 3220437 0.6 - . g687 Scaffold_2 AUGUSTUS transcript 3219479 3220437 0.6 - . g687.t1 Scaffold_2 AUGUSTUS stop_codon 3219479 3219481 . - 0 transcript_id "g687.t1"; gene_id "g687"; Scaffold_2 AUGUSTUS CDS 3219479 3219806 0.81 - 1 transcript_id "g687.t1"; gene_id "g687"; Scaffold_2 AUGUSTUS CDS 3219875 3220437 0.6 - 0 transcript_id "g687.t1"; gene_id "g687"; Scaffold_2 AUGUSTUS start_codon 3220435 3220437 . - 0 transcript_id "g687.t1"; gene_id "g687"; # protein sequence = [MTTYTYLFSPLVPTVNNSPASITAGHVLPLKVWTTNTGLQMPASSAAIGASPGDSVTPTHVNNNGSFSNAQNSGKSNA # DTQSAANIPKSSDSSTKPSDNSTKPPTTPPNPPTTPPHPLMNTRGFMCLQLGSEELFTIRNVTSVNPPQLRLPATYRDLDRVWDDERPSWDPEDCGKN # LLSINGTPIALRVEGRLCFFQPFTLSISFHQYVAERYRASSPDEFWKEFSFSDGRRFHWKAISDQLRDLRSKHEQQLVDKAKAEYGADFARVFVNNRG # KVLTDKSAISRHYLDKLANRLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g687 ### # start gene g688 Scaffold_2 AUGUSTUS gene 3223540 3224097 0.93 - . g688 Scaffold_2 AUGUSTUS transcript 3223540 3224097 0.93 - . g688.t1 Scaffold_2 AUGUSTUS stop_codon 3223540 3223542 . - 0 transcript_id "g688.t1"; gene_id "g688"; Scaffold_2 AUGUSTUS CDS 3223540 3224097 0.93 - 0 transcript_id "g688.t1"; gene_id "g688"; Scaffold_2 AUGUSTUS start_codon 3224095 3224097 . - 0 transcript_id "g688.t1"; gene_id "g688"; # protein sequence = [MVSLLDQIPDICLDVGPSGMLRISGSFWVEKANEESIPHELYPAGILNVEALNEAAKHISQDMLLRRLSRIFSQGNDA # KVAPPVSSVEAPQKQTQKRSRSATIGEDTDPATSKTSQPKTKKHAKSDLVPASGSSRARKNADRHPRSHRRKSKISDVATGRASAGVPRSDRVGPTAT # SSSYNLRKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g688 ### # start gene g689 Scaffold_2 AUGUSTUS gene 3226770 3228330 0.31 - . g689 Scaffold_2 AUGUSTUS transcript 3226770 3228330 0.31 - . g689.t1 Scaffold_2 AUGUSTUS stop_codon 3226770 3226772 . - 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_2 AUGUSTUS CDS 3226770 3227303 0.57 - 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_2 AUGUSTUS CDS 3227564 3228025 1 - 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_2 AUGUSTUS CDS 3228133 3228330 0.59 - 0 transcript_id "g689.t1"; gene_id "g689"; Scaffold_2 AUGUSTUS start_codon 3228328 3228330 . - 0 transcript_id "g689.t1"; gene_id "g689"; # protein sequence = [MKERIKSLCYDYLLRSRLEGWLGDDEDDYIAYGFARVKFSGELKRIRIDEPLVLMACAMWLNGSPGRVFQTPRRLGQV # FDFLDKKSALAQKRATLVTLQIDKVGTKRKLVEGTTDIQNIGEAKLPGALGLGIESLDESASLTDWVKLKSHTAFCFPMNEMGPDIMCFLKLQGDKDN # PEDFTYICLAVQCKFYQVDGELEPSTLKDAIATVTPRKFFAPRHGKTPKYTQDPDEEDHHPLGQLNADLLSTETAHLHPTNLLKVIKGRARKEKKKGK # SFWDTFDPAILWSDSEDSEDELPTKTGRRKTGRRKTADPAEPIEFGSQARMVIEMLDSDYSRSRGLDLPSRPKRKREEMDLDELDIERNEDEGYEEDY # LEIEEDSNDYDDDYEDDDDDDYNSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g689 ### # start gene g690 Scaffold_2 AUGUSTUS gene 3231147 3231839 0.46 + . g690 Scaffold_2 AUGUSTUS transcript 3231147 3231839 0.46 + . g690.t1 Scaffold_2 AUGUSTUS start_codon 3231147 3231149 . + 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_2 AUGUSTUS CDS 3231147 3231839 0.46 + 0 transcript_id "g690.t1"; gene_id "g690"; Scaffold_2 AUGUSTUS stop_codon 3231837 3231839 . + 0 transcript_id "g690.t1"; gene_id "g690"; # protein sequence = [MANSAEDIVSWFKHERDEPFCALLSSSSNTVILAFCLQLADERSFWVFVRISSKSTNEEDIDLRRKLMTSTPPRSSMT # RYVTTHCTLNSPKTEPIVGFQPDVLPLLSDLPLCLEVGELGVLRISGSSWAERATEDKISAEQRPAGVLNIDGLDMAEKGVPHSEFMRRLSLAIVQTK # KKVEAAPPLTVEEHSKKGKKRGRSSTVVDEAGAVTPTIIGTGKPRARGPLKALL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g690 ### # start gene g691 Scaffold_2 AUGUSTUS gene 3235860 3236975 0.97 - . g691 Scaffold_2 AUGUSTUS transcript 3235860 3236975 0.97 - . g691.t1 Scaffold_2 AUGUSTUS stop_codon 3235860 3235862 . - 0 transcript_id "g691.t1"; gene_id "g691"; Scaffold_2 AUGUSTUS CDS 3235860 3236975 0.97 - 0 transcript_id "g691.t1"; gene_id "g691"; Scaffold_2 AUGUSTUS start_codon 3236973 3236975 . - 0 transcript_id "g691.t1"; gene_id "g691"; # protein sequence = [MIGRIGGSLFSIHVAFNVLSYFFLQKIHPPQTQRRRICSPSEKAQRKIESEKSKRLAEVLKHQTEVRAAAERETARLL # EIEAEEKAAREREEQARLEKEQEEREQREKEEEEQRQKEEREREQREKEEKEKEERRKEREKERQKAAEQARLQREREEEAEKRRAQRALERAQEKEQ # GSQRKSVFGPSGGAPAAGDGVSPGAAPGAGVWRRRAAAETTPSGTPASSVPGTPTKSAFGAPRASAAADIPARSESPAPGAGAKYRPGGGLGGGLGGG # LGGGRSDGWRSRLEAKGKGEAPPPSTGTEGVSNGRGGGIGSNVPSRTGSPAPGAFGGRNDAKGGEKGEAEDGFTVVGGDKKNVWKSKRGGFGGLGGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g691 ### # start gene g692 Scaffold_2 AUGUSTUS gene 3238000 3240443 0.42 - . g692 Scaffold_2 AUGUSTUS transcript 3238000 3240443 0.42 - . g692.t1 Scaffold_2 AUGUSTUS stop_codon 3238000 3238002 . - 0 transcript_id "g692.t1"; gene_id "g692"; Scaffold_2 AUGUSTUS CDS 3238000 3238531 0.81 - 1 transcript_id "g692.t1"; gene_id "g692"; Scaffold_2 AUGUSTUS CDS 3238614 3238668 0.43 - 2 transcript_id "g692.t1"; gene_id "g692"; Scaffold_2 AUGUSTUS CDS 3239177 3240443 0.87 - 0 transcript_id "g692.t1"; gene_id "g692"; Scaffold_2 AUGUSTUS start_codon 3240441 3240443 . - 0 transcript_id "g692.t1"; gene_id "g692"; # protein sequence = [MAPFSKPETVLKQAEGLVSVGQTHAALQSLSEMFSSKRFRSTPVTALEPILIRFMELCVELRKGRTAKEGLMQYKNLA # QNTNVGSIEVVVGRFIEMAEGKVVEAKEKAREVAAKEVELGGGAAGDVDDLEAPSTPESILLSSVSSPSSASSIHSDRTSRALITPSLKFLWESYRTS # LETLKNNARLETIYQSVAQKAFRFCLINNRKTEFRRLCETLRLHLANVGKYAAQQRELHAAGGAATSAGHHQINLGDPDTLQRHLDTRFAQLNASVEL # ELWQEAFRSIEDIHNLLTMANSMPQIVQPLNTIAGAAATTTPSLVGTTAAGAGGSVTANAASGVGSGAGSAPASSSLTIKSTMMANYYEKLSRVFLMS # GNALYHAAAWAKYYNLVTYAGAKAVGTGESKEVLAGKVIVSALAVPVGSGDLLAPLNTPIRQKEPQGLQGVDRVYDEPFSMATSSTGTSADAQASPSG # ASGASGMIGEDGATIDDGYKPVQPSATALVRTRLSSVAGCLYQSLRELEGQGLVAPAPSPQYSEDSTEVIFLFIYPPNLLNSISIAGFGSTFSRRTHQ # ISSYITASIPQNFAPPSKSHRTSPSTSTRAPCPSAGAKFDDAGGGATKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g692 ### # start gene g693 Scaffold_2 AUGUSTUS gene 3245049 3246277 0.34 - . g693 Scaffold_2 AUGUSTUS transcript 3245049 3246277 0.34 - . g693.t1 Scaffold_2 AUGUSTUS stop_codon 3245049 3245051 . - 0 transcript_id "g693.t1"; gene_id "g693"; Scaffold_2 AUGUSTUS CDS 3245049 3245836 0.91 - 2 transcript_id "g693.t1"; gene_id "g693"; Scaffold_2 AUGUSTUS CDS 3245959 3246277 0.34 - 0 transcript_id "g693.t1"; gene_id "g693"; Scaffold_2 AUGUSTUS start_codon 3246275 3246277 . - 0 transcript_id "g693.t1"; gene_id "g693"; # protein sequence = [MSRALGAAFLNHQVEQLEKSVGNVHGPSSGNWRDRTSKYNSGNPNNSKHNAPKRVSSKVVNANNRKRDGEFQLLTRDR # ESPKSEQGLKKRSNEQQEKDADIVIVDAMDFTALNTLDLLKKGTTSLAQRAREASRILEAQVGNNPRIRVQRDEAFVPWDAIDFQLESDNTDDKSNIQ # NSPEWVRRTICCARWEVQHASPAGDTGTKPNVVIAVCTAITTSPSNATTKLPDADPNSTALLTPVPLPAPSHAHFNKHEPRTMGSQVSRWAAKAGVTI # LDLKPAPPPSQSTPKSNGSTGYSAHPRSSSEEDRPKRILTNKGGRRPPSAETGKLKGGLVERSPAVSIMMEMVQRSDSKAVRVLARGEKLDPDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g693 ### # start gene g694 Scaffold_2 AUGUSTUS gene 3261159 3262600 0.6 - . g694 Scaffold_2 AUGUSTUS transcript 3261159 3262600 0.6 - . g694.t1 Scaffold_2 AUGUSTUS stop_codon 3261159 3261161 . - 0 transcript_id "g694.t1"; gene_id "g694"; Scaffold_2 AUGUSTUS CDS 3261159 3262189 0.77 - 2 transcript_id "g694.t1"; gene_id "g694"; Scaffold_2 AUGUSTUS CDS 3262360 3262600 0.62 - 0 transcript_id "g694.t1"; gene_id "g694"; Scaffold_2 AUGUSTUS start_codon 3262598 3262600 . - 0 transcript_id "g694.t1"; gene_id "g694"; # protein sequence = [MDIEALHQASSALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVLITAIFAFKSSATSMIIHSPPFRPEPHS # RSSTANVEWLTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTERVI # RLSSSTSGSIVPTNRIWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHAFLREEILLAQSRYKEQADRKRI # SHPEFPIGSEVFVLAKTYSSRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEIL # DSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHAVELVPHSMLDTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g694 ### # start gene g695 Scaffold_2 AUGUSTUS gene 3266082 3266670 0.53 - . g695 Scaffold_2 AUGUSTUS transcript 3266082 3266670 0.53 - . g695.t1 Scaffold_2 AUGUSTUS stop_codon 3266082 3266084 . - 0 transcript_id "g695.t1"; gene_id "g695"; Scaffold_2 AUGUSTUS CDS 3266082 3266343 0.98 - 1 transcript_id "g695.t1"; gene_id "g695"; Scaffold_2 AUGUSTUS CDS 3266432 3266670 0.54 - 0 transcript_id "g695.t1"; gene_id "g695"; Scaffold_2 AUGUSTUS start_codon 3266668 3266670 . - 0 transcript_id "g695.t1"; gene_id "g695"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTCTLVTDNL # SNHSPPYGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPRSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g695 ### # start gene g696 Scaffold_2 AUGUSTUS gene 3273283 3274834 0.47 - . g696 Scaffold_2 AUGUSTUS transcript 3273283 3274834 0.47 - . g696.t1 Scaffold_2 AUGUSTUS stop_codon 3273283 3273285 . - 0 transcript_id "g696.t1"; gene_id "g696"; Scaffold_2 AUGUSTUS CDS 3273283 3274135 0.98 - 1 transcript_id "g696.t1"; gene_id "g696"; Scaffold_2 AUGUSTUS CDS 3274719 3274834 0.48 - 0 transcript_id "g696.t1"; gene_id "g696"; Scaffold_2 AUGUSTUS start_codon 3274832 3274834 . - 0 transcript_id "g696.t1"; gene_id "g696"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTPRRGQPPVVAPARGRGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGV # YDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFV # ARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIA # DCNKRKARESKGRAAEVEETPEATVRLLKRNRKTSPQLLFPGTKRELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g696 ### # start gene g697 Scaffold_2 AUGUSTUS gene 3277691 3278368 0.97 + . g697 Scaffold_2 AUGUSTUS transcript 3277691 3278368 0.97 + . g697.t1 Scaffold_2 AUGUSTUS start_codon 3277691 3277693 . + 0 transcript_id "g697.t1"; gene_id "g697"; Scaffold_2 AUGUSTUS CDS 3277691 3278368 0.97 + 0 transcript_id "g697.t1"; gene_id "g697"; Scaffold_2 AUGUSTUS stop_codon 3278366 3278368 . + 0 transcript_id "g697.t1"; gene_id "g697"; # protein sequence = [MSLRTNPPRKADNRPTKPTAALLIGSISSIKTTSKDRYHDPDGSKYRVCKDQPCPNRYDKITTGYIPSFLDLSTESKK # TLYLDEEHPRAGRIIIIPETEGTPEAAPAPEPEYPVFPPPPSPVLDRPSSPISSLPRSSPPPPDPEDPDPGAEVSDPESDDDDNNMSKVFKAFDKVSM # LKSDGSNWDTWKNRVELATDQLDFQITSHLIQKMTLKHGKPRKTMMEIY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g697 ### # start gene g698 Scaffold_2 AUGUSTUS gene 3278613 3279446 0.9 + . g698 Scaffold_2 AUGUSTUS transcript 3278613 3279446 0.9 + . g698.t1 Scaffold_2 AUGUSTUS start_codon 3278613 3278615 . + 0 transcript_id "g698.t1"; gene_id "g698"; Scaffold_2 AUGUSTUS CDS 3278613 3279446 0.9 + 0 transcript_id "g698.t1"; gene_id "g698"; Scaffold_2 AUGUSTUS stop_codon 3279444 3279446 . + 0 transcript_id "g698.t1"; gene_id "g698"; # protein sequence = [MFNNTIIASIPNIFKPMINTLVVVAARTSVPLTTRELVSTIRAEASGHTRGQSGKKESANYAGGNSNRGRGGFNRNRG # NFRGQSRGRGNGNRGGGQSRPNSNNSTCYNCGGKGHFANKCSSPKRQQANEAQESSQKKEKNQPSGSGSNNWRSKNKEVGSSATIEELPESSWAAVEV # TTTTSQEIFNFSEIASNYETAFIASHSSGAILFDSGCSSHMTPLQDKLCNTRSVPTQIIQAANAETFTSNCRKSPDRSSNQRGWNFEIAYTPKHSPMP # QHA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g698 ### # start gene g699 Scaffold_2 AUGUSTUS gene 3280163 3280698 0.47 + . g699 Scaffold_2 AUGUSTUS transcript 3280163 3280698 0.47 + . g699.t1 Scaffold_2 AUGUSTUS start_codon 3280163 3280165 . + 0 transcript_id "g699.t1"; gene_id "g699"; Scaffold_2 AUGUSTUS CDS 3280163 3280167 0.48 + 0 transcript_id "g699.t1"; gene_id "g699"; Scaffold_2 AUGUSTUS CDS 3280251 3280698 0.49 + 1 transcript_id "g699.t1"; gene_id "g699"; Scaffold_2 AUGUSTUS stop_codon 3280696 3280698 . + 0 transcript_id "g699.t1"; gene_id "g699"; # protein sequence = [METPKKANGMISPWEKRFGTIPDISNFHIFGSTVYVKREKEPGKLDPQAQEGRWVGIEPESNGYFIYWPDRHTVSTER # NVQFSDRQIQPIEGEDQDLGNLETSITESEQPIIPVPEEIAEPINPDIITGKRVRKLTKKIQDIINGLGEPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g699 ### # start gene g700 Scaffold_2 AUGUSTUS gene 3281948 3282736 0.39 + . g700 Scaffold_2 AUGUSTUS transcript 3281948 3282736 0.39 + . g700.t1 Scaffold_2 AUGUSTUS start_codon 3281948 3281950 . + 0 transcript_id "g700.t1"; gene_id "g700"; Scaffold_2 AUGUSTUS CDS 3281948 3282736 0.39 + 0 transcript_id "g700.t1"; gene_id "g700"; Scaffold_2 AUGUSTUS stop_codon 3282734 3282736 . + 0 transcript_id "g700.t1"; gene_id "g700"; # protein sequence = [MTHTRSIHLSQRAYIDAILSRYGFADVKPLSIPFDPHIHLTKDQMPTTVEDITYMRDKPYREAVGALQYLSVATRPDI # TYAVGILAKFLQNPGITHWNAVKRVYAYLKYTRDLWLTFGGTQAEIEGYTDADGMSQEDRHAISGYVFMLNGGAVSWSSKRQDTISLSTTEAEYIALT # HAAKEAIWFRNLLSELFGPITKPIILNADNQSAIALAKDDRFHARTKHIDIRYLHPICHRRRKDPPCLLPYGGHDCRHLYKGASIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g700 ### # start gene g701 Scaffold_2 AUGUSTUS gene 3288296 3289609 0.56 - . g701 Scaffold_2 AUGUSTUS transcript 3288296 3289609 0.56 - . g701.t1 Scaffold_2 AUGUSTUS stop_codon 3288296 3288298 . - 0 transcript_id "g701.t1"; gene_id "g701"; Scaffold_2 AUGUSTUS CDS 3288296 3288880 1 - 0 transcript_id "g701.t1"; gene_id "g701"; Scaffold_2 AUGUSTUS CDS 3288935 3289609 0.56 - 0 transcript_id "g701.t1"; gene_id "g701"; Scaffold_2 AUGUSTUS start_codon 3289607 3289609 . - 0 transcript_id "g701.t1"; gene_id "g701"; # protein sequence = [MHRAITSFLTTSKGCVDFTVTDLALVNQDYGIFLDPMCSRIGLEEPMTVTFGAKWFSQNPHFTLVKLSGTFARDYDTG # IHPSHFASSLALSLALCFGKSSEISNTFTTFGLPGRLPLGRLVKFIKVAERLETLHVQFSENMPDKLVFVAGAPEEVMSWFKHDHDEPFCVMSSSSSA # SVTLVFCLSLSDEQNFWVFVSVPSTFTSENPDFAQDIKEIHPKVIFRDQPEVVTLLDQLPNLNTDVGPSGILRISGSFRVKSATVDSIPHEEYPAGFL # NIEGLDKLTKEISQDMLMRRLSRIFTQEGRIKPFHAALPTAAQDDVSAIVKKRGRSTSTVDATSTSRTDGTKVQKSSKDIVAIGSGSMPRKGRRGTRN # LRTRRSNRNMRDVVTGRASVVVPRSSLVDSTVPSSSSVSPYNLRKRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g701 ### # start gene g702 Scaffold_2 AUGUSTUS gene 3295541 3296394 0.8 + . g702 Scaffold_2 AUGUSTUS transcript 3295541 3296394 0.8 + . g702.t1 Scaffold_2 AUGUSTUS start_codon 3295541 3295543 . + 0 transcript_id "g702.t1"; gene_id "g702"; Scaffold_2 AUGUSTUS CDS 3295541 3295817 0.8 + 0 transcript_id "g702.t1"; gene_id "g702"; Scaffold_2 AUGUSTUS CDS 3295934 3296394 0.9 + 2 transcript_id "g702.t1"; gene_id "g702"; Scaffold_2 AUGUSTUS stop_codon 3296392 3296394 . + 0 transcript_id "g702.t1"; gene_id "g702"; # protein sequence = [MSFGLDDSNVVLESCFDPDTGELNLRCLDGLVNNFNETMLRAIRCNMDIKFIGSGASAKAVLYYITNYITKSQLKAHV # AYAALERAVRDWMNNFEDHFTSHKYKNLYWVQIENLVENELPSPECQPARKAFENVLATFTGDPIDTTNEVIDCNLSSEVCNEHESNDALAEDDHEVE # DDEEVGIAVGVDGSLVAKASQVDDYRYRPVSVEDLCLWEQVAQCKKARKVRQNVDIKDFVDEMRHSKTV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g702 ### # start gene g703 Scaffold_2 AUGUSTUS gene 3296436 3297119 0.96 + . g703 Scaffold_2 AUGUSTUS transcript 3296436 3297119 0.96 + . g703.t1 Scaffold_2 AUGUSTUS start_codon 3296436 3296438 . + 0 transcript_id "g703.t1"; gene_id "g703"; Scaffold_2 AUGUSTUS CDS 3296436 3297119 0.96 + 0 transcript_id "g703.t1"; gene_id "g703"; Scaffold_2 AUGUSTUS stop_codon 3297117 3297119 . + 0 transcript_id "g703.t1"; gene_id "g703"; # protein sequence = [MPALSELLGHRSHEHPKFDFNTAHPEYSTHLFIVDSSFNRRIPVPIGPSLPRRDRESDWPRYCRLMLIFFKPWRNAAD # LRGPYLDWSEAFAAFALTCSDRVKQMMDNMQIMHECKDSRDDHFLNRNSARRLRNSRSYVGAGDKDRLTEDDFLAEHDNEPEILEHLLSIEGTQSQYV # AKLRTEALSCVQYMDASGFFGAKDDTVLNTQTSACYDRIRLCSPCRRRPSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g703 ### # start gene g704 Scaffold_2 AUGUSTUS gene 3298116 3299083 0.55 + . g704 Scaffold_2 AUGUSTUS transcript 3298116 3299083 0.55 + . g704.t1 Scaffold_2 AUGUSTUS start_codon 3298116 3298118 . + 0 transcript_id "g704.t1"; gene_id "g704"; Scaffold_2 AUGUSTUS CDS 3298116 3298275 0.6 + 0 transcript_id "g704.t1"; gene_id "g704"; Scaffold_2 AUGUSTUS CDS 3298446 3299083 0.56 + 2 transcript_id "g704.t1"; gene_id "g704"; Scaffold_2 AUGUSTUS stop_codon 3299081 3299083 . + 0 transcript_id "g704.t1"; gene_id "g704"; # protein sequence = [MINERSTAAFAKRTGKPLHWYYASDTRGGKPVNDIGLQSFLENMDSGQTNHRLAEAALPYLEHKTDVVALEDKISLSF # THEFTRKKCTFQRTQLPVAPAFAFTTHKAQGQTLDSAIVDLESCRGTEAPYVMVSRVKTLDGLLVLRPFQLKKIQCRQSEDSRSEHKRLHLLALETIV # NCGSYKERVDAQTRLGAYKSQSLTVADDDVESPHQLDVVQQEVAHLRHIVPSSGSYSSKSQTKRQTRPLTASAPESSGRQVLKKRKIIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g704 ### # start gene g705 Scaffold_2 AUGUSTUS gene 3299994 3300871 0.45 + . g705 Scaffold_2 AUGUSTUS transcript 3299994 3300871 0.45 + . g705.t1 Scaffold_2 AUGUSTUS start_codon 3299994 3299996 . + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_2 AUGUSTUS CDS 3299994 3300167 0.46 + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_2 AUGUSTUS CDS 3300246 3300254 0.5 + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_2 AUGUSTUS CDS 3300407 3300436 0.92 + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_2 AUGUSTUS CDS 3300485 3300871 0.99 + 0 transcript_id "g705.t1"; gene_id "g705"; Scaffold_2 AUGUSTUS stop_codon 3300869 3300871 . + 0 transcript_id "g705.t1"; gene_id "g705"; # protein sequence = [MPDSDNSHRDRIIEARGAESSIKKRSIESMNAEGNAVERHARSKSAPRTPKGKASLTLITVPKNKKKPKRKVYQAIIN # FLKVVAESDIPVVYPPQPAGSRVHNALKIASGQSSAASVLRMIGSSHPSSKTSTIASDPFTEQVLKPTFGNSSFADKYPEMDRDSDGFIDPEDMDIGG # DELVDDPTDHRGKAVKRLKTAGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g705 ### # start gene g706 Scaffold_2 AUGUSTUS gene 3301289 3301636 0.51 + . g706 Scaffold_2 AUGUSTUS transcript 3301289 3301636 0.51 + . g706.t1 Scaffold_2 AUGUSTUS start_codon 3301289 3301291 . + 0 transcript_id "g706.t1"; gene_id "g706"; Scaffold_2 AUGUSTUS CDS 3301289 3301636 0.51 + 0 transcript_id "g706.t1"; gene_id "g706"; Scaffold_2 AUGUSTUS stop_codon 3301634 3301636 . + 0 transcript_id "g706.t1"; gene_id "g706"; # protein sequence = [MAHYNYLPDSISTAVFEDRRKPGGIYDKLAQAFVAMGPNAIANAELDQDFFRFNFSESWSSNYSFRGIDSKQYTANIF # GEIVGQAHGTFVGAQGNHFIGNDPTKVNPSVTYMSTF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g706 ### # start gene g707 Scaffold_2 AUGUSTUS gene 3302013 3302789 0.25 + . g707 Scaffold_2 AUGUSTUS transcript 3302013 3302789 0.25 + . g707.t1 Scaffold_2 AUGUSTUS start_codon 3302013 3302015 . + 0 transcript_id "g707.t1"; gene_id "g707"; Scaffold_2 AUGUSTUS CDS 3302013 3302178 0.46 + 0 transcript_id "g707.t1"; gene_id "g707"; Scaffold_2 AUGUSTUS CDS 3302322 3302455 0.37 + 2 transcript_id "g707.t1"; gene_id "g707"; Scaffold_2 AUGUSTUS CDS 3302514 3302789 0.81 + 0 transcript_id "g707.t1"; gene_id "g707"; Scaffold_2 AUGUSTUS stop_codon 3302787 3302789 . + 0 transcript_id "g707.t1"; gene_id "g707"; # protein sequence = [MKKDKTSINDNSFASPAKRNLKKRNFASTKNHDSGAPLNDILPDESASKTLAFPTAPVDQYQNELIVPWKNYDSLRPG # TLVVATVCFEVFVMSPKSASESIYHATITSLRVIAESDVIVSPPTPSVSNKKGISVQPVTSSAAASALASIDWCSTATSSSLSGSDHTLDGEDPPKEG # SEASTDGKRKKARKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g707 ### # start gene g708 Scaffold_2 AUGUSTUS gene 3312458 3314319 0.27 - . g708 Scaffold_2 AUGUSTUS transcript 3312458 3314319 0.27 - . g708.t1 Scaffold_2 AUGUSTUS stop_codon 3312458 3312460 . - 0 transcript_id "g708.t1"; gene_id "g708"; Scaffold_2 AUGUSTUS CDS 3312458 3313205 0.86 - 1 transcript_id "g708.t1"; gene_id "g708"; Scaffold_2 AUGUSTUS CDS 3313358 3314319 0.27 - 0 transcript_id "g708.t1"; gene_id "g708"; Scaffold_2 AUGUSTUS start_codon 3314317 3314319 . - 0 transcript_id "g708.t1"; gene_id "g708"; # protein sequence = [MNCAEFTNFQRVFVNTSGSGKTRLILEHLCSQWGIYLTCHQESRVGSLDLMRAISAMEQRTRNLPHVPLLQVTHEQLM # EYNYSQGTVCTEQDCLKARFKGNNLLDSFRSTPEGERYGMLLEANKQVVTVELLALVLARLHILERYVATLHKMRENTSQMFHKRQWLYLQLHPEILT # LTDGKPKDIFIELIQHITGLFTEAKLASNNLQIEVMYILLQEVLSNISDTLGSKFDVAVDECQFVAKKMGSCFCSVDWMLKRPLLRQIARCLDDLFND # TSQITGCFIFTGTGLSRDIISEALSSVISKPGFTGDVNETAHLLMLRHRFTAEYISVALQNGYQHLDKVLNEYVGQMTNIRPADYDGPETTSKKIVWP # VRGFAFEELDAEMRERIKMISHEYLFSSKLSTDLGENERRYVEYGLARFTNSPGSPKQYILIDEPLVLLACSMWFNNQPQRCGTNLYQTLASRIRDHN # ASSGRNGFEEFICFYLQHVFSKPRKLNEVFQFLGEDIKDKNPQNTKPTIGQKLATLVTLHIFDNGKEARLVEGKINLVGKPSLLGPIGQAIESGHPNL # C] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g708 ### # start gene g709 Scaffold_2 AUGUSTUS gene 3333520 3334093 0.39 + . g709 Scaffold_2 AUGUSTUS transcript 3333520 3334093 0.39 + . g709.t1 Scaffold_2 AUGUSTUS start_codon 3333520 3333522 . + 0 transcript_id "g709.t1"; gene_id "g709"; Scaffold_2 AUGUSTUS CDS 3333520 3333800 0.47 + 0 transcript_id "g709.t1"; gene_id "g709"; Scaffold_2 AUGUSTUS CDS 3333916 3334093 0.39 + 1 transcript_id "g709.t1"; gene_id "g709"; Scaffold_2 AUGUSTUS stop_codon 3334091 3334093 . + 0 transcript_id "g709.t1"; gene_id "g709"; # protein sequence = [MVEAQEIACSLQPRIENLIKDEISLPSWEPAFNAPNLKVPQDHKDFIHDLKIPRARAPHNHLPDMLLYELGRFQQDEQ # LKARLQGLFTKHPNHNWGLYFSCHDDSHVGSEDVPSAMSNIRDTLFGSTLPHAPNLLVTSADIAAHARYRYKCS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g709 ### # start gene g710 Scaffold_2 AUGUSTUS gene 3335002 3335544 0.79 + . g710 Scaffold_2 AUGUSTUS transcript 3335002 3335544 0.79 + . g710.t1 Scaffold_2 AUGUSTUS start_codon 3335002 3335004 . + 0 transcript_id "g710.t1"; gene_id "g710"; Scaffold_2 AUGUSTUS CDS 3335002 3335544 0.79 + 0 transcript_id "g710.t1"; gene_id "g710"; Scaffold_2 AUGUSTUS stop_codon 3335542 3335544 . + 0 transcript_id "g710.t1"; gene_id "g710"; # protein sequence = [MHQLLDQYINSVACFRPADFKVPEKNLFGIVELPSPAFEFEKLNERMRQKIKIIAHEYLFTSKLESHLGSDERAYIEL # GLARISGYDGQKSVKIDEPLVLLACSVWFNEQRPHTVYKTLADQIDHHYPSSGRNGFEEFMSYYLLQIFRKPIKLNEVFDFEGGDDKGLGDREGPISD # APSG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g710 ### # start gene g711 Scaffold_2 AUGUSTUS gene 3335895 3336425 0.79 + . g711 Scaffold_2 AUGUSTUS transcript 3335895 3336425 0.79 + . g711.t1 Scaffold_2 AUGUSTUS start_codon 3335895 3335897 . + 0 transcript_id "g711.t1"; gene_id "g711"; Scaffold_2 AUGUSTUS CDS 3335895 3336425 0.79 + 0 transcript_id "g711.t1"; gene_id "g711"; Scaffold_2 AUGUSTUS stop_codon 3336423 3336425 . + 0 transcript_id "g711.t1"; gene_id "g711"; # protein sequence = [MPSWLMNDFTFKKDSSLDRVSKRANVLNALQSLKFRDPSAGKYGIIRIICGFPVNVDLAKAFPQALATQSTDNFIVKR # QRVITQDPDEGDNHLLGKLRTSLLISATKDEHPTDILDIIRDSAVNAKENGMNYFDENDPAVLEIDQRGNAASVDCIVMDSAEIETLLTGSKRKRNHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g711 ### # start gene g712 Scaffold_2 AUGUSTUS gene 3337183 3337812 0.37 + . g712 Scaffold_2 AUGUSTUS transcript 3337183 3337812 0.37 + . g712.t1 Scaffold_2 AUGUSTUS start_codon 3337183 3337185 . + 0 transcript_id "g712.t1"; gene_id "g712"; Scaffold_2 AUGUSTUS CDS 3337183 3337812 0.37 + 0 transcript_id "g712.t1"; gene_id "g712"; Scaffold_2 AUGUSTUS stop_codon 3337810 3337812 . + 0 transcript_id "g712.t1"; gene_id "g712"; # protein sequence = [MAQQEALKRFPDIGKSEHASNFLYTCLTPEVREKLSLEHCATALSEDPTLHEKLKDAHRSQNLEALENLCGASFDIFC # KAKYLISPTVHVKQIAWRFHPDLGKMNELIRSIAFDGSLASIARGESERHFWKPTSDDAHADTTVHHESLHIPVGTMNDAVPLIILHELGSFQHNAKS # REKLDRIFSSLNHTYEIILFHERSKSLLSIDSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g712 ### # start gene g713 Scaffold_2 AUGUSTUS gene 3338990 3340324 0.4 + . g713 Scaffold_2 AUGUSTUS transcript 3338990 3340324 0.4 + . g713.t1 Scaffold_2 AUGUSTUS start_codon 3338990 3338992 . + 0 transcript_id "g713.t1"; gene_id "g713"; Scaffold_2 AUGUSTUS CDS 3338990 3339724 0.44 + 0 transcript_id "g713.t1"; gene_id "g713"; Scaffold_2 AUGUSTUS CDS 3340004 3340324 0.45 + 0 transcript_id "g713.t1"; gene_id "g713"; Scaffold_2 AUGUSTUS stop_codon 3340322 3340324 . + 0 transcript_id "g713.t1"; gene_id "g713"; # protein sequence = [MHRAAASFLSTSAGCTDCLTEDRVLITEDYGYFIDPDCAQIALNEPITVTAGAIWLKKNFYFGFAKFIRIFCKRSEVF # VHPTHFAHFLAFWLTSISGPPCEIPDTYRSFGPPTVIPNPCKISDAFRIIGLPAALPEVKLVTFTKIEQRFEAVDVRLLEDIYGKLVFMADSNEDILS # WFKHERDEPFCALLSSSSNTVILAFCLQRADEQSFWVFVRISSKSTNEEDIDFAQEIDDLHPTKVFHDQAIVQTKKKVETALPPPVVEDSKKGKKRGR # SSTVLEDSATTPSVARTRKTKSARSTRGDVSDRRATGTRRTKSLKSTNVNVTTGSDNKPGVQTIVKLLEESYDLVAV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g713 ### # start gene g714 Scaffold_2 AUGUSTUS gene 3344790 3346042 0.53 - . g714 Scaffold_2 AUGUSTUS transcript 3344790 3346042 0.53 - . g714.t1 Scaffold_2 AUGUSTUS stop_codon 3344790 3344792 . - 0 transcript_id "g714.t1"; gene_id "g714"; Scaffold_2 AUGUSTUS CDS 3344790 3345615 0.96 - 1 transcript_id "g714.t1"; gene_id "g714"; Scaffold_2 AUGUSTUS CDS 3345762 3346042 0.56 - 0 transcript_id "g714.t1"; gene_id "g714"; Scaffold_2 AUGUSTUS start_codon 3346040 3346042 . - 0 transcript_id "g714.t1"; gene_id "g714"; # protein sequence = [MIEAERLVDGFQSQMQKLIKDEISLPSWKPTFNSPDLKIPQDHKEFIHNLKIPLARAPHHNLPDMLLYELGRFQQDKR # LEARIQALFTAEPYHNSHVGSKDLPSAMSNIRQSLDQSILPHAPNLLVTSADIAAHARDKGIPHRDITEADVLTNRIANFKKDVPKSDQFRQALQKNQ # QVAESELVVPLLARLLVFQRYITTLSNMGENLHQMDHKRRWLHLQLHPHLLNSNGSGEGDLFDQISGDLNALFERQNLHLSQKIVIMRRLSKEILDCV # RKTLGLDQEAMPIYFVIDECQFSVTDMEDLFRSADWTTKRGILRELARSWDKTLNRASGLGIVSSAFIFTRDRAVQGAHLRCDFLRCCEDPVLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g714 ### # start gene g715 Scaffold_2 AUGUSTUS gene 3348770 3350342 0.59 + . g715 Scaffold_2 AUGUSTUS transcript 3348770 3350342 0.59 + . g715.t1 Scaffold_2 AUGUSTUS start_codon 3348770 3348772 . + 0 transcript_id "g715.t1"; gene_id "g715"; Scaffold_2 AUGUSTUS CDS 3348770 3349472 0.71 + 0 transcript_id "g715.t1"; gene_id "g715"; Scaffold_2 AUGUSTUS CDS 3349540 3350342 0.8 + 2 transcript_id "g715.t1"; gene_id "g715"; Scaffold_2 AUGUSTUS stop_codon 3350340 3350342 . + 0 transcript_id "g715.t1"; gene_id "g715"; # protein sequence = [MIKSEIKRACLSDEELDEAMLHLMEEIQSIWEMPGGDFFYIAVDEVNVASRMHEEAFEDQRGRYPILKEILRSLRRRM # GQLPVKFVISGTIIPEDHFQSTIGEWDDFRWCSETGSFNDPDEHRRYITKFLPPKFAISVPGQALLDRMWQWLRGRFVQVYCCYIQKLLTAFSMVSHR # YTASFLAVLLYNFHSPHTLLGNYIENITEYFPDDNEQYSEGEEGRYNNWYSPLGHRGLGSLNTVTVEMHRAATSFLSTSTGCIDCLTEDRVLITEDYG # YFIDADCIQIALNEPMTVTSGAIWLKKNFYFGFAKFIRIFCKISEVVVHPTHFAHFLAFWLTSISGPSCEIPNTYRSFGPPTVIPNPCKISDAFRIIG # LPAALPEVKLVTFTKIEQRFEAVDVHLREDIYGKLVFMASSNENILSWFKHERDEPFCALLSSSSNTVILVFCLQCADEQSFWVFVRISSKSTNEEDI # DFAQEIDNLHPTKVFHDQVRTNALQFRALRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g715 ### # start gene g716 Scaffold_2 AUGUSTUS gene 3360210 3361376 0.88 + . g716 Scaffold_2 AUGUSTUS transcript 3360210 3361376 0.88 + . g716.t1 Scaffold_2 AUGUSTUS start_codon 3360210 3360212 . + 0 transcript_id "g716.t1"; gene_id "g716"; Scaffold_2 AUGUSTUS CDS 3360210 3361376 0.88 + 0 transcript_id "g716.t1"; gene_id "g716"; Scaffold_2 AUGUSTUS stop_codon 3361374 3361376 . + 0 transcript_id "g716.t1"; gene_id "g716"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g716 ### # start gene g717 Scaffold_2 AUGUSTUS gene 3361427 3362860 0.93 + . g717 Scaffold_2 AUGUSTUS transcript 3361427 3362860 0.93 + . g717.t1 Scaffold_2 AUGUSTUS start_codon 3361427 3361429 . + 0 transcript_id "g717.t1"; gene_id "g717"; Scaffold_2 AUGUSTUS CDS 3361427 3362860 0.93 + 0 transcript_id "g717.t1"; gene_id "g717"; Scaffold_2 AUGUSTUS stop_codon 3362858 3362860 . + 0 transcript_id "g717.t1"; gene_id "g717"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g717 ### # start gene g718 Scaffold_2 AUGUSTUS gene 3365805 3366647 0.14 + . g718 Scaffold_2 AUGUSTUS transcript 3365805 3366647 0.14 + . g718.t1 Scaffold_2 AUGUSTUS start_codon 3365805 3365807 . + 0 transcript_id "g718.t1"; gene_id "g718"; Scaffold_2 AUGUSTUS CDS 3365805 3366060 0.14 + 0 transcript_id "g718.t1"; gene_id "g718"; Scaffold_2 AUGUSTUS CDS 3366166 3366647 0.5 + 2 transcript_id "g718.t1"; gene_id "g718"; Scaffold_2 AUGUSTUS stop_codon 3366645 3366647 . + 0 transcript_id "g718.t1"; gene_id "g718"; # protein sequence = [MRVELEEVKDEEYEARQPGPHELFPSEKYLGPDDPIPMGINKWLAFTSKSTEQEVEETLEVERSAMEAGTPRSTKDSE # EAYQKWKNIESLNIPKIPSRSGLTPKGSIRHNNFRRKQLIAGTHVVEQKSDPTIQGKPISLIGAAGMDRLLREGTPAYFLHISPTKEESLTEEMLRAS # NSSSPEEVQQPKDPESGRTRPEEREAIKELDEEESKCQETEELKKSIPVQYQGYLDVFSPGEARTLPPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g718 ### # start gene g719 Scaffold_2 AUGUSTUS gene 3367051 3368070 0.75 + . g719 Scaffold_2 AUGUSTUS transcript 3367051 3368070 0.75 + . g719.t1 Scaffold_2 AUGUSTUS start_codon 3367051 3367053 . + 0 transcript_id "g719.t1"; gene_id "g719"; Scaffold_2 AUGUSTUS CDS 3367051 3368070 0.75 + 0 transcript_id "g719.t1"; gene_id "g719"; Scaffold_2 AUGUSTUS stop_codon 3368068 3368070 . + 0 transcript_id "g719.t1"; gene_id "g719"; # protein sequence = [MPFGLTNAPSAFQFFMNEIFHDMVDVCMVIYLDDILIYSDNEESHVEHVRKVLERLRANHLHAKPEKCAFHIDTVKYL # GVIISPLGVSMDPEKMKVVMDWPKPRTVKELQAFLGFANFYRRFIDNYLGITKVFTKLLRKDSVWNWTPQCSSAFELLKTAFSEAPVLGHYNPDLPVI # LECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYNKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFFTTKQLTAQQAHRAELL # SGYDFVINYRPGRLGAKPDALTQRSDVYPKKGAPRDQVLARRERILIPPERLNATILMNEDLLVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g719 ### # start gene g720 Scaffold_2 AUGUSTUS gene 3368818 3369456 0.69 + . g720 Scaffold_2 AUGUSTUS transcript 3368818 3369456 0.69 + . g720.t1 Scaffold_2 AUGUSTUS start_codon 3368818 3368820 . + 0 transcript_id "g720.t1"; gene_id "g720"; Scaffold_2 AUGUSTUS CDS 3368818 3369456 0.69 + 0 transcript_id "g720.t1"; gene_id "g720"; Scaffold_2 AUGUSTUS stop_codon 3369454 3369456 . + 0 transcript_id "g720.t1"; gene_id "g720"; # protein sequence = [MAEFVYNNTPNTTTGVSPFFANKGYHPKLSITLEQVQGAEVNEYTSNLKELHTYLQERIRIANEVHAQYANQKRQEAP # DWKEGDHIWLNMENVRMRRPMKKLDHKWMGPYSILSKVGSHAYRLDLPGDLHKIHNVFHVDRLKPHFPRQTSPPPLIFIKGETEHFVEDILDSKPKKG # RPEEVEYLVKWEGYSEEFNSWVGWEGMAGSLGLLQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g720 ### # start gene g721 Scaffold_2 AUGUSTUS gene 3384733 3385074 0.72 - . g721 Scaffold_2 AUGUSTUS transcript 3384733 3385074 0.72 - . g721.t1 Scaffold_2 AUGUSTUS stop_codon 3384733 3384735 . - 0 transcript_id "g721.t1"; gene_id "g721"; Scaffold_2 AUGUSTUS CDS 3384733 3385074 0.72 - 0 transcript_id "g721.t1"; gene_id "g721"; Scaffold_2 AUGUSTUS start_codon 3385072 3385074 . - 0 transcript_id "g721.t1"; gene_id "g721"; # protein sequence = [MNANGGGGGNGGGSGTSSVVFGGAGRGSPGPGGPGGPGVGGLGGGGGGPGMHRNKQWVAGGANANANAREEGEGEEEA # VCLGRRSSLGRGWMLGRGWMTSPPREKETSKTKKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g721 ### # start gene g722 Scaffold_2 AUGUSTUS gene 3388358 3389074 0.87 + . g722 Scaffold_2 AUGUSTUS transcript 3388358 3389074 0.87 + . g722.t1 Scaffold_2 AUGUSTUS start_codon 3388358 3388360 . + 0 transcript_id "g722.t1"; gene_id "g722"; Scaffold_2 AUGUSTUS CDS 3388358 3389074 0.87 + 0 transcript_id "g722.t1"; gene_id "g722"; Scaffold_2 AUGUSTUS stop_codon 3389072 3389074 . + 0 transcript_id "g722.t1"; gene_id "g722"; # protein sequence = [MAQLIKQVANLATAMEECSSARSSINKPEVFKGKDSAEARRFMAQFQNWASEQPDLTKSQAKLIKSALGFFTESAGDW # ATPHLLHFNAEHPPFGGNWEEFLKEFVQRFESVDPGMEARSEIKNLKQVKVRQSRNSQKFKDIGDRLECLTLIYGNAFHCPTSGDPQNLIIVNIAQGL # APTLKEAIKRAISVDVYMHDPTMTGRNSGHAPTHTAHTTPADPTLWTLMQPTLVMGILGRHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g722 ### # start gene g723 Scaffold_2 AUGUSTUS gene 3393376 3394126 0.42 - . g723 Scaffold_2 AUGUSTUS transcript 3393376 3394126 0.42 - . g723.t1 Scaffold_2 AUGUSTUS stop_codon 3393376 3393378 . - 0 transcript_id "g723.t1"; gene_id "g723"; Scaffold_2 AUGUSTUS CDS 3393376 3393993 0.43 - 0 transcript_id "g723.t1"; gene_id "g723"; Scaffold_2 AUGUSTUS CDS 3394118 3394126 0.87 - 0 transcript_id "g723.t1"; gene_id "g723"; Scaffold_2 AUGUSTUS start_codon 3394124 3394126 . - 0 transcript_id "g723.t1"; gene_id "g723"; # protein sequence = [MKKNGRLRSPSSLPELASLDISPEYLDKTHFRNPPKVEVGPDGVPRYRGEADDIEAVSTSSIISAPLSTGLPLLTDGR # VADIPKRPNKRFEPYSTAAQPAAKRQRKRPNHNTNNDTSPPESPTSEDRDRQRGRSSSQTPTPSSSSSQPPVPYSDPDPSVASVGVVSGVGVASAQPA # YTGYYPMPDMDPLRPMFITLLFSNLRLCLHKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g723 ### # start gene g724 Scaffold_2 AUGUSTUS gene 3402016 3402405 0.53 + . g724 Scaffold_2 AUGUSTUS transcript 3402016 3402405 0.53 + . g724.t1 Scaffold_2 AUGUSTUS start_codon 3402016 3402018 . + 0 transcript_id "g724.t1"; gene_id "g724"; Scaffold_2 AUGUSTUS CDS 3402016 3402405 0.53 + 0 transcript_id "g724.t1"; gene_id "g724"; Scaffold_2 AUGUSTUS stop_codon 3402403 3402405 . + 0 transcript_id "g724.t1"; gene_id "g724"; # protein sequence = [MNGAMEGVAGFGLASDPNFNAVLYDPTQPVGQRFSILNNTIVARLYHSEATLLPDGRILVSGSDPQTPGFPEEMRIEV # YVPPYLNQGIRQPEYNISETDFGYGQTFQITNVQVFHGSIANIKVSLIAGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g724 ### # start gene g725 Scaffold_2 AUGUSTUS gene 3408788 3409411 0.43 - . g725 Scaffold_2 AUGUSTUS transcript 3408788 3409411 0.43 - . g725.t1 Scaffold_2 AUGUSTUS stop_codon 3408788 3408790 . - 0 transcript_id "g725.t1"; gene_id "g725"; Scaffold_2 AUGUSTUS CDS 3408788 3409411 0.43 - 0 transcript_id "g725.t1"; gene_id "g725"; Scaffold_2 AUGUSTUS start_codon 3409409 3409411 . - 0 transcript_id "g725.t1"; gene_id "g725"; # protein sequence = [MKSTLSAADFNTTLTHAKRTTSFDSAAHNLSFVPATYSMTSTPMPLSTHPSRGPSDRSSHPLTTSSYRIPLKIRDFAY # AASDPRHQGLGEDSKGTLNIPRENRVRVIYQMLLDDVEYQAWKAAAISADQDIQDSDAMDVDEYENEDEEETDEDDNRGWNGRWSLPSDEPNYENEED # DEEGEEDAGPLVPVYTVPFTLSFRKVHERWR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g725 ### # start gene g726 Scaffold_2 AUGUSTUS gene 3411942 3412328 0.57 - . g726 Scaffold_2 AUGUSTUS transcript 3411942 3412328 0.57 - . g726.t1 Scaffold_2 AUGUSTUS stop_codon 3411942 3411944 . - 0 transcript_id "g726.t1"; gene_id "g726"; Scaffold_2 AUGUSTUS CDS 3411942 3412328 0.57 - 0 transcript_id "g726.t1"; gene_id "g726"; Scaffold_2 AUGUSTUS start_codon 3412326 3412328 . - 0 transcript_id "g726.t1"; gene_id "g726"; # protein sequence = [MLVESGELGKIVSKNRLAIISLDDLIFSSGTAGNILTGDERRVKADDAPVAKYATLTNMYNAKTTPSDKGANFFNVGI # GSLQRKLVLSSRIERLAYLDFIDHTEHTLNHVLADDPIHKLIKPYLPPDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g726 ### # start gene g727 Scaffold_2 AUGUSTUS gene 3413458 3414819 0.94 - . g727 Scaffold_2 AUGUSTUS transcript 3413458 3414819 0.94 - . g727.t1 Scaffold_2 AUGUSTUS stop_codon 3413458 3413460 . - 0 transcript_id "g727.t1"; gene_id "g727"; Scaffold_2 AUGUSTUS CDS 3413458 3414002 0.99 - 2 transcript_id "g727.t1"; gene_id "g727"; Scaffold_2 AUGUSTUS CDS 3414159 3414819 0.95 - 0 transcript_id "g727.t1"; gene_id "g727"; Scaffold_2 AUGUSTUS start_codon 3414817 3414819 . - 0 transcript_id "g727.t1"; gene_id "g727"; # protein sequence = [MNTKLAQLNTLSSSLSTTKDHLSGLDSNLATIQTDIDWVKGDLDGIRSDVDEARGNVDQVRSDTDGNRMDIDGLRNDV # ESIRGEFDSLRGEVDGVKDECDIVHGDSAGFQSEINEVRSDVEGMRMELNDMRRDVDDLMGQQSLKGDAAVHGKEELSNLRQEWIKWKEDAKVDAHIT # QARTQNAIDAVHTRGDSLPITKLQDCRAGLAIAEADIKALYRQIELHKLQEKSVAELKATESARSEAENELRIIVALRQEIEQTAAQVCIIVREGSGE # LNINQTTSQNHLVRSSLKRKHADDSDDSIGEGSVINVGVSESLNEVMSVDVESHSKSFANNSVRACGTIGDDFTTSTVSSDADGILIPFPKRVRRLER # ARRIGTVAVQTATVAAVGAITAWAALAFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g727 ### # start gene g728 Scaffold_2 AUGUSTUS gene 3415128 3417107 0.2 - . g728 Scaffold_2 AUGUSTUS transcript 3415128 3417107 0.2 - . g728.t1 Scaffold_2 AUGUSTUS stop_codon 3415128 3415130 . - 0 transcript_id "g728.t1"; gene_id "g728"; Scaffold_2 AUGUSTUS CDS 3415128 3416806 0.64 - 2 transcript_id "g728.t1"; gene_id "g728"; Scaffold_2 AUGUSTUS CDS 3417071 3417107 0.27 - 0 transcript_id "g728.t1"; gene_id "g728"; Scaffold_2 AUGUSTUS start_codon 3417105 3417107 . - 0 transcript_id "g728.t1"; gene_id "g728"; # protein sequence = [MFRRVNTNTVVVVQVHNGDVVVFGKSVGRNNEIVRPIVARVELIFNNSIPRRPASTTKSISSSSGRYGLRSSDTSEGD # SSSSDSSANSNESPSPSYDHSSDHESDIVEIPPPPKLSLSTVIPSVNSALRTLTLPILNGTYPCQANLCVVLTHSYISFTVPGTEANRDHLSLPSLSF # SPSMSNSKFNQPQADKTTIEAVNGVDAYTNDIFDFGSPIHPLEDSFAIRPQTTQALRSRTKMSMNTLFQHGRPDRPPRRKSKSWSMSPMDLATPSPPP # SPPKSVGNNDNSLTSTDTPLVISEPRRDSSCKLDLLPEINRVDSLHNRFQRTSRVLVAVEHTTSSTFLPPMRSLQHFSSPPALLNRISNSSQSLSQST # CAVNCSPEEPILRPLSLMMRMVDSVQTSSRPASTCSKEQESSVAVLVEEAPEHGISLSSPQLDHTEDVHDVQDSRDPEDNTDMLVSIEDELGPHAEGC # LTEEPPSVVTDNIEDEDRLGMDEQVFDEVDINRSGVQEEPENVMTTSFFGVVDTDQITQVEEPNSSMIDLQVMSATSSPVTSVLQRAGAAFSSLKVSI # SAI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g728 ### # start gene g729 Scaffold_2 AUGUSTUS gene 3417861 3418214 0.48 - . g729 Scaffold_2 AUGUSTUS transcript 3417861 3418214 0.48 - . g729.t1 Scaffold_2 AUGUSTUS stop_codon 3417861 3417863 . - 0 transcript_id "g729.t1"; gene_id "g729"; Scaffold_2 AUGUSTUS CDS 3417861 3418214 0.48 - 0 transcript_id "g729.t1"; gene_id "g729"; Scaffold_2 AUGUSTUS start_codon 3418212 3418214 . - 0 transcript_id "g729.t1"; gene_id "g729"; # protein sequence = [MEATTTPASAPGHGRSSNSRGSSSIKKPRSAGAEPSMKSSPMSKGKVHWGSLIHGSQSKNGSRSAGPSSHGIQQLSAP # VKPARSRPSPGLHIIAEGPGGFYVNITSFASDTFDSSSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g729 ### # start gene g730 Scaffold_2 AUGUSTUS gene 3428037 3428492 0.73 + . g730 Scaffold_2 AUGUSTUS transcript 3428037 3428492 0.73 + . g730.t1 Scaffold_2 AUGUSTUS start_codon 3428037 3428039 . + 0 transcript_id "g730.t1"; gene_id "g730"; Scaffold_2 AUGUSTUS CDS 3428037 3428492 0.73 + 0 transcript_id "g730.t1"; gene_id "g730"; Scaffold_2 AUGUSTUS stop_codon 3428490 3428492 . + 0 transcript_id "g730.t1"; gene_id "g730"; # protein sequence = [MQTYARQGGTSSIFVHDDGLQLVSPEERERRIQFYANHNIGWVARPPHSNDPDGYKRAGRFKKASNMNYGLALSLKME # AKLAELEASEASGVSAATEDGLCLEDKALQMAIEEVYETNGKKWKPWACNGRSLRIGDVILIVDSDPSCQRWA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g730 ### # start gene g731 Scaffold_2 AUGUSTUS gene 3432874 3433494 0.56 - . g731 Scaffold_2 AUGUSTUS transcript 3432874 3433494 0.56 - . g731.t1 Scaffold_2 AUGUSTUS stop_codon 3432874 3432876 . - 0 transcript_id "g731.t1"; gene_id "g731"; Scaffold_2 AUGUSTUS CDS 3432874 3433494 0.56 - 0 transcript_id "g731.t1"; gene_id "g731"; Scaffold_2 AUGUSTUS start_codon 3433492 3433494 . - 0 transcript_id "g731.t1"; gene_id "g731"; # protein sequence = [MGELHLEIYVERMRREYNVDCITGKPRVAFRETITSRADFNYTHKKQTGGAGQYAKVIGYIEPMQPDEETGKDTEFVN # DILGGAIPEGYFPGVEKVRYFYSSLSQWANLLAAPLSLCSLFVIFTAVPHQGFFEALEKGTLSGNVISGCRLVLIDGGYHIVDSSELAFRIATIGAFR # EAYKLANPVILEPIMTVEVIAPVEFQSEWL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g731 ### # start gene g732 Scaffold_2 AUGUSTUS gene 3434772 3435087 0.43 - . g732 Scaffold_2 AUGUSTUS transcript 3434772 3435087 0.43 - . g732.t1 Scaffold_2 AUGUSTUS stop_codon 3434772 3434774 . - 0 transcript_id "g732.t1"; gene_id "g732"; Scaffold_2 AUGUSTUS CDS 3434772 3434912 0.5 - 0 transcript_id "g732.t1"; gene_id "g732"; Scaffold_2 AUGUSTUS CDS 3434965 3435087 0.66 - 0 transcript_id "g732.t1"; gene_id "g732"; Scaffold_2 AUGUSTUS start_codon 3435085 3435087 . - 0 transcript_id "g732.t1"; gene_id "g732"; # protein sequence = [MDLEREKGITIQSAATFCDWEATNAITNEKEKYAINILILLSIFAGHVDFTIEVERALRVLDGAILVLCAVAGVQVRP # PSMPPFYNL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g732 ### # start gene g733 Scaffold_2 AUGUSTUS gene 3441739 3443172 0.85 + . g733 Scaffold_2 AUGUSTUS transcript 3441739 3443172 0.85 + . g733.t1 Scaffold_2 AUGUSTUS start_codon 3441739 3441741 . + 0 transcript_id "g733.t1"; gene_id "g733"; Scaffold_2 AUGUSTUS CDS 3441739 3443172 0.85 + 0 transcript_id "g733.t1"; gene_id "g733"; Scaffold_2 AUGUSTUS stop_codon 3443170 3443172 . + 0 transcript_id "g733.t1"; gene_id "g733"; # protein sequence = [MEDHEKKMRNLLKKVHDLGGMATDAQFRQIIISSMPSDWRSDVRSVPGTLSADAFTYLHTLWYEKEEERKEDERDFKR # VKALMAAQPRTSTSNQNRAGGRTAITCHNCGKPGHIARKCWAKGGGMEGQGPKQGQPKGTDTSANAASIEDTDIKTPMATYVMSATAGNKPSKSESVQ # ELKPTADPAIRQSDTLLRDQGQREAGDEDVDTDLGRYKVVVKRECMACHGNTLCIPPIPIIQTFLDSGASEHCWVQRSDFIEYMTVQGQGGSSAISGD # TGKFQITGTGTVQFTARTSAGERVVQLRGVKHTPSFGHNLISLPTLDSRGMRGEWGQGKMTVRSPDNEIILEGQGHNKMYEVTVLESGETTANYSRYH # DRPTDAITWHRRLGHVSIPHILQMSNRKLVDGLNITNREVRGMCEDCLYGRQRSTHSMKSSRTNQRCWNEHTLTYSARHGQRPEGEQATLCYAPMEGH # RIEYHTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g733 ### # start gene g734 Scaffold_2 AUGUSTUS gene 3444482 3445994 0.33 + . g734 Scaffold_2 AUGUSTUS transcript 3444482 3445994 0.33 + . g734.t1 Scaffold_2 AUGUSTUS start_codon 3444482 3444484 . + 0 transcript_id "g734.t1"; gene_id "g734"; Scaffold_2 AUGUSTUS CDS 3444482 3445059 0.33 + 0 transcript_id "g734.t1"; gene_id "g734"; Scaffold_2 AUGUSTUS CDS 3445184 3445994 1 + 1 transcript_id "g734.t1"; gene_id "g734"; Scaffold_2 AUGUSTUS stop_codon 3445992 3445994 . + 0 transcript_id "g734.t1"; gene_id "g734"; # protein sequence = [MEEEQQFEYSTLYTGDGQPVQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDL # DTVITMIKTLLSTPTIRAPNNNNDDLDDDSGGLPRGDLVTPVDLVVLVVPAVPAVLVDLVDLVPQSLLTSPTSNELCWNSSRGSRVPLRPLVPSSPLS # AALLTALNPRARSRSQSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAA # LKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGK # PNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g734 ### # start gene g735 Scaffold_2 AUGUSTUS gene 3446325 3447046 0.47 + . g735 Scaffold_2 AUGUSTUS transcript 3446325 3447046 0.47 + . g735.t1 Scaffold_2 AUGUSTUS start_codon 3446325 3446327 . + 0 transcript_id "g735.t1"; gene_id "g735"; Scaffold_2 AUGUSTUS CDS 3446325 3446344 0.47 + 0 transcript_id "g735.t1"; gene_id "g735"; Scaffold_2 AUGUSTUS CDS 3446413 3447046 1 + 1 transcript_id "g735.t1"; gene_id "g735"; Scaffold_2 AUGUSTUS stop_codon 3447044 3447046 . + 0 transcript_id "g735.t1"; gene_id "g735"; # protein sequence = [MANIAVRIGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINTVVAKVAVPLPEPSPSVSPTILETPPGDSPR # SRSRSRSRTLRAKPLSSKFPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAARAADRSSTTPTVPPLHPSIPEEY # AEFADVFDEIAADSLPEHRPYDLKIDLEEALRRLSAVFTFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g735 ### # start gene g736 Scaffold_2 AUGUSTUS gene 3463172 3464944 0.39 + . g736 Scaffold_2 AUGUSTUS transcript 3463172 3464944 0.39 + . g736.t1 Scaffold_2 AUGUSTUS start_codon 3463172 3463174 . + 0 transcript_id "g736.t1"; gene_id "g736"; Scaffold_2 AUGUSTUS CDS 3463172 3464944 0.39 + 0 transcript_id "g736.t1"; gene_id "g736"; Scaffold_2 AUGUSTUS stop_codon 3464942 3464944 . + 0 transcript_id "g736.t1"; gene_id "g736"; # protein sequence = [MVQCELESVGEFPPEQFDQKGQLHGSDGRFLAQKHSSPRNTEVPELLNPGNTATRSPQLRSGTSPTVHALAQNATPPP # RVNLQTKPLTPVSTQRYQFGEVRMDGAQHSSRISGQDLTARLAPNPVHVPPRLSNPSVIPYQGSVSMQSQAVGTESQRGPNQRRTLAVHEEAVPPQGA # PFGTPFVTGAQMNRPGMAFESARSQESVAMIQQQARVIETLQEQLREVKKGFTEGEVPTGGPLSKTGNTAGLSGRAPRVMREYTRGGPSPVVPQPRSW # QATEPISFNRNTPTGARGGNPQVEQAGQIPDTPSVDRRRIHEWGARVQRAELGEYGRPEGGAYALENEGEGKGGFNPPPRVPPPHFSSQSRDRERPPS # QGGQGQREQGGRSGGGAPPPPPPPPPPSGGPGDSNSEGSNEGEQNQSSRNGGRREEDRGELPTGAPDVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNE # GRSTWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLRGEYTCSKTGQNSN # ESSVPNSDPSTRRTRQGGDWPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g736 ### # start gene g737 Scaffold_2 AUGUSTUS gene 3470650 3471537 0.98 - . g737 Scaffold_2 AUGUSTUS transcript 3470650 3471537 0.98 - . g737.t1 Scaffold_2 AUGUSTUS stop_codon 3470650 3470652 . - 0 transcript_id "g737.t1"; gene_id "g737"; Scaffold_2 AUGUSTUS CDS 3470650 3471537 0.98 - 0 transcript_id "g737.t1"; gene_id "g737"; Scaffold_2 AUGUSTUS start_codon 3471535 3471537 . - 0 transcript_id "g737.t1"; gene_id "g737"; # protein sequence = [MIKEYPDEGYYEVVLPPLSQLEGDLHKAREDLRRVATFAHRLYRSEPATVLHHHYRYLGAIIEAVVAFLRRGLDSDDL # DTVVHNFQLGLDYMQAARGVHGDMYMRSLSSIQWFFNNAVDEDEGLYRMVLEHSRFDNDGPFLTAAQHAGFAPPPDSSLEPPLHRRMFALSTALPHSD # GAGRWDDIVPALPSIDQLTADWEQLMLQYIHHITDTPLPVPDPPVPMSSMGPVPESSGEANVEQSLEAPIVQVSSPSAGSHPPVPLFLSEQESPTSPS # PPPCSPVPPLLLGPSPAYPSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g737 ### # start gene g738 Scaffold_2 AUGUSTUS gene 3477015 3478799 0.39 - . g738 Scaffold_2 AUGUSTUS transcript 3477015 3478799 0.39 - . g738.t1 Scaffold_2 AUGUSTUS stop_codon 3477015 3477017 . - 0 transcript_id "g738.t1"; gene_id "g738"; Scaffold_2 AUGUSTUS CDS 3477015 3478799 0.39 - 0 transcript_id "g738.t1"; gene_id "g738"; Scaffold_2 AUGUSTUS start_codon 3478797 3478799 . - 0 transcript_id "g738.t1"; gene_id "g738"; # protein sequence = [MLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVH # HVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHD # HPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPC # TSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVI # NSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLG # DRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSW # EPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g738 ### # start gene g739 Scaffold_2 AUGUSTUS gene 3479078 3480730 0.86 - . g739 Scaffold_2 AUGUSTUS transcript 3479078 3480730 0.86 - . g739.t1 Scaffold_2 AUGUSTUS stop_codon 3479078 3479080 . - 0 transcript_id "g739.t1"; gene_id "g739"; Scaffold_2 AUGUSTUS CDS 3479078 3480730 0.86 - 0 transcript_id "g739.t1"; gene_id "g739"; Scaffold_2 AUGUSTUS start_codon 3480728 3480730 . - 0 transcript_id "g739.t1"; gene_id "g739"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNFGNYEGSWDLQTSTDALSGILPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g739 ### # start gene g740 Scaffold_2 AUGUSTUS gene 3480781 3481947 0.88 - . g740 Scaffold_2 AUGUSTUS transcript 3480781 3481947 0.88 - . g740.t1 Scaffold_2 AUGUSTUS stop_codon 3480781 3480783 . - 0 transcript_id "g740.t1"; gene_id "g740"; Scaffold_2 AUGUSTUS CDS 3480781 3481947 0.88 - 0 transcript_id "g740.t1"; gene_id "g740"; Scaffold_2 AUGUSTUS start_codon 3481945 3481947 . - 0 transcript_id "g740.t1"; gene_id "g740"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g740 ### # start gene g741 Scaffold_2 AUGUSTUS gene 3487999 3488631 0.57 - . g741 Scaffold_2 AUGUSTUS transcript 3487999 3488631 0.57 - . g741.t1 Scaffold_2 AUGUSTUS stop_codon 3487999 3488001 . - 0 transcript_id "g741.t1"; gene_id "g741"; Scaffold_2 AUGUSTUS CDS 3487999 3488631 0.57 - 0 transcript_id "g741.t1"; gene_id "g741"; Scaffold_2 AUGUSTUS start_codon 3488629 3488631 . - 0 transcript_id "g741.t1"; gene_id "g741"; # protein sequence = [MFDTAHEHLPGMENMELRVIGTSKVFLKSPMEPTLDKSSVQIGNDLTVAQAEPTLRNTAAPGALAPVMELTAALRENS # NRANTPLRAKAWLLAMSELNLSAKYPTLVESIWHGFNVGIPKIYHTFTPPNRLNESESRAAFQKVMRNEIEMGHWLGPYTRATIKKVLGPFQTSPISM # IPKSDKPGRYRLLENLSYPYRPIMSLPCTQKYPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g741 ### # start gene g742 Scaffold_2 AUGUSTUS gene 3496639 3497905 0.56 + . g742 Scaffold_2 AUGUSTUS transcript 3496639 3497905 0.56 + . g742.t1 Scaffold_2 AUGUSTUS start_codon 3496639 3496641 . + 0 transcript_id "g742.t1"; gene_id "g742"; Scaffold_2 AUGUSTUS CDS 3496639 3496878 0.61 + 0 transcript_id "g742.t1"; gene_id "g742"; Scaffold_2 AUGUSTUS CDS 3496936 3497422 0.93 + 0 transcript_id "g742.t1"; gene_id "g742"; Scaffold_2 AUGUSTUS CDS 3497673 3497905 0.95 + 2 transcript_id "g742.t1"; gene_id "g742"; Scaffold_2 AUGUSTUS stop_codon 3497903 3497905 . + 0 transcript_id "g742.t1"; gene_id "g742"; # protein sequence = [MLANARFAKKKADMKGKTRAIPSNVAYDMAHAHQVGFGEGTGPEDLDIPLDVHHFMSNRRDHPVHLTPFLLQQHSDPA # KKNFVSKLEDHLLGRLKEIPFDGDYEFTADERQDVIIAEEKIYAAKTLRINYTTYDVRRDQDVINPRTDHNTIMLKSPDTNPDAHPYWYAQVLGIFHA # DIIHCDSKLGLVKSRKQMEFLWVRWLGTEPDYRPGQKFAKLPKVGFVPEDDEFAFGFLNPSQVIRAYSIPEGDEDNDTSDIDFTGPEDVLTPNFDSEF # EDGSDVLENVDSDDSEAGNQIWLRNYLAPATAESSDTDDEDYDIE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g742 ### # start gene g743 Scaffold_2 AUGUSTUS gene 3499309 3499990 0.24 - . g743 Scaffold_2 AUGUSTUS transcript 3499309 3499990 0.24 - . g743.t1 Scaffold_2 AUGUSTUS stop_codon 3499309 3499311 . - 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_2 AUGUSTUS CDS 3499309 3499540 0.37 - 1 transcript_id "g743.t1"; gene_id "g743"; Scaffold_2 AUGUSTUS CDS 3499692 3499990 0.66 - 0 transcript_id "g743.t1"; gene_id "g743"; Scaffold_2 AUGUSTUS start_codon 3499988 3499990 . - 0 transcript_id "g743.t1"; gene_id "g743"; # protein sequence = [MHSGRKGSCVALWLSFSAVATPAAGGWPDKIVAPSAVPFEPGYPVPHALTIKEIEEVVVAFKNSAQRAVTAGYDVLNI # HAAHGYLLSEFLSPVANKRTDNVSATDCLEHENYPSWKLPDTIELAKIIREHGVDVLDVSSGGQSAAQTINVFDVQSVYAKQVKDVVGDSLLVGCLHH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g743 ### # start gene g744 Scaffold_2 AUGUSTUS gene 3522691 3523373 0.54 + . g744 Scaffold_2 AUGUSTUS transcript 3522691 3523373 0.54 + . g744.t1 Scaffold_2 AUGUSTUS start_codon 3522691 3522693 . + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_2 AUGUSTUS CDS 3522691 3522756 0.55 + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_2 AUGUSTUS CDS 3522798 3522953 0.9 + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_2 AUGUSTUS CDS 3523008 3523373 1 + 0 transcript_id "g744.t1"; gene_id "g744"; Scaffold_2 AUGUSTUS stop_codon 3523371 3523373 . + 0 transcript_id "g744.t1"; gene_id "g744"; # protein sequence = [MNLYGLSGTIISEVPSNLMFALHDLDPNESARFVDKEDGTPVMMAIRNFCSLVEIVNWVNDIVLRNVACQRNVRKEDA # GCIVICGWSAGSRSKPAFDFVCNFLSSKSEDEKHSLRYEAASVFALFWNMICALGPEEVLSDIENFLSTTNIYGMDVNVHAGGPENVYTVPINGVPIT # FCNARMAPPSGVFARNYAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g744 ### # start gene g745 Scaffold_2 AUGUSTUS gene 3529904 3530713 0.35 - . g745 Scaffold_2 AUGUSTUS transcript 3529904 3530713 0.35 - . g745.t1 Scaffold_2 AUGUSTUS stop_codon 3529904 3529906 . - 0 transcript_id "g745.t1"; gene_id "g745"; Scaffold_2 AUGUSTUS CDS 3529904 3530494 0.53 - 0 transcript_id "g745.t1"; gene_id "g745"; Scaffold_2 AUGUSTUS CDS 3530552 3530713 0.36 - 0 transcript_id "g745.t1"; gene_id "g745"; Scaffold_2 AUGUSTUS start_codon 3530711 3530713 . - 0 transcript_id "g745.t1"; gene_id "g745"; # protein sequence = [MPQTNRNSHCHTPRANHAMSEAVKAFRRSAMKVDRVLKQFFGGHSDIGHFQYLQGETGMIVSGLIPLQLFNQQVYKNS # GLETYCLLKRCDDVGKWYQSIGYAFEPAQKQEATFKEDYKQVAEREEETSDNSQSNIGSDIRGGPQYRSRNIARVWNFESVAGLKIQLIGTRIIPEAV # VLEFHSSKFIFITVIRNMLSHEYPNTKGSICAISLYHIQATSNTTRQCQGRASEEVQINEEEIQASWIQGREVT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g745 ### # start gene g746 Scaffold_2 AUGUSTUS gene 3532494 3533585 0.91 + . g746 Scaffold_2 AUGUSTUS transcript 3532494 3533585 0.91 + . g746.t1 Scaffold_2 AUGUSTUS start_codon 3532494 3532496 . + 0 transcript_id "g746.t1"; gene_id "g746"; Scaffold_2 AUGUSTUS CDS 3532494 3533585 0.91 + 0 transcript_id "g746.t1"; gene_id "g746"; Scaffold_2 AUGUSTUS stop_codon 3533583 3533585 . + 0 transcript_id "g746.t1"; gene_id "g746"; # protein sequence = [MNGLLELLYYSHAVLHYASFISDSKFVFVRGGRKPKSTAYESLCSVFHSPLAIDSPKPSQPKAPNSTTCLATSNVPAQ # LPRSATFTFQARLPSHDFLVNAKMDESSPLVHNPITTLPRSPTFSFKSRLPSHQFSTEAPMHVLSTTSLPPPLHSMVSTLSSSIDCKLGVGTNPSTHN # CTIESESSGMKLVEKAVFPPPPNTQSHIDNIIRKWCTASSPKQFEEGGCAVCGLLKPATNLSPLKHIKNMLHILEVPGVSRVPRKNSSEPIRDRSGPV # IDATCKMICDNCRSDLRSSKVPRYALCNGLWLGDVPLELKHLTFYERMLVSRVRHSKCFVHVQRGGSNGNGHSKLVSNVIAFENPTPKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g746 ### # start gene g747 Scaffold_2 AUGUSTUS gene 3533632 3534693 0.78 + . g747 Scaffold_2 AUGUSTUS transcript 3533632 3534693 0.78 + . g747.t1 Scaffold_2 AUGUSTUS start_codon 3533632 3533634 . + 0 transcript_id "g747.t1"; gene_id "g747"; Scaffold_2 AUGUSTUS CDS 3533632 3534693 0.78 + 0 transcript_id "g747.t1"; gene_id "g747"; Scaffold_2 AUGUSTUS stop_codon 3534691 3534693 . + 0 transcript_id "g747.t1"; gene_id "g747"; # protein sequence = [MFSGSGTPTDDEYKRALLLVRRNIVAEAIHWCILNHSDYDDVLFSPENLQGYTEDAPIVAIEYFQKDSNRNAEGVSVH # DDLEDDGIEGSECVFTVHGIIGEDLQHMTVDAQKARALKHLDDGGRFLRTSHAEKPESIYNNPHLYPKMFPWLFPYGLGGIGGTRLSSSKLSDEKHKS # LLMMYHDKRFQTDLSFPFIAFSHEQVKAGTTQSYVVANSKKFDNIASRMLSIDKQTLEDLATRMATGEFVKPSSNEETECFDLLRDLNYGSSKVKGSI # TSKKNMQHEIWSLITNVGAPSWYFTLAPCDQKHPICMYYADTNESFNVPVRTSAERRRLLSNNPAAGARFFFTSWSHYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g747 ### # start gene g748 Scaffold_2 AUGUSTUS gene 3535793 3537326 0.41 + . g748 Scaffold_2 AUGUSTUS transcript 3535793 3537326 0.41 + . g748.t1 Scaffold_2 AUGUSTUS start_codon 3535793 3535795 . + 0 transcript_id "g748.t1"; gene_id "g748"; Scaffold_2 AUGUSTUS CDS 3535793 3535814 0.46 + 0 transcript_id "g748.t1"; gene_id "g748"; Scaffold_2 AUGUSTUS CDS 3535882 3537326 0.61 + 2 transcript_id "g748.t1"; gene_id "g748"; Scaffold_2 AUGUSTUS stop_codon 3537324 3537326 . + 0 transcript_id "g748.t1"; gene_id "g748"; # protein sequence = [MNIVIITYDAGSASEGDDNAILQCPGLRHMQFLDGHPLFSTHSVAMRRNWTNVIPNFIGPSLPRPDKEDREYYCCSML # LFFKPWRSGDNLKGAHESWHEAFTAHKFNKQELLFMKNMNLWYECLDSCDDFRAQLKAGNFTSLAGTLPFNIDSIDEGLYNSLGTNTSIDADFVDDEN # DELVVLYDPETGMQTGKLCMARQRAMKVMRDILFSCGWTDSVPMSFNVNNTLNNIEQSNIPIHRAEDWSNLIRTTRQQLLLQRREHATLSSNKETNLG # KYKCKPNIVEICDKSYFEKLGIEYGSIKKVTETIIDEFQLNVEQERAFRIVAHHASGACCEQLNMYIGGMGGTGKSQVVKALLQFFESLKRRHAIIVV # APTGNAAALLGGSTYHFLLGINGKFEEAPISTMSEVCSRLQGIEYVVLDEVSMVSCNEMYRISERLAKVRNEVGLAFGGMNMIFAGDFAQPPPIGGES # VSLYTHCAGSDPKSLNGQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g748 ### # start gene g749 Scaffold_2 AUGUSTUS gene 3537387 3539687 0.91 + . g749 Scaffold_2 AUGUSTUS transcript 3537387 3539687 0.91 + . g749.t1 Scaffold_2 AUGUSTUS start_codon 3537387 3537389 . + 0 transcript_id "g749.t1"; gene_id "g749"; Scaffold_2 AUGUSTUS CDS 3537387 3539687 0.91 + 0 transcript_id "g749.t1"; gene_id "g749"; Scaffold_2 AUGUSTUS stop_codon 3539685 3539687 . + 0 transcript_id "g749.t1"; gene_id "g749"; # protein sequence = [MRNQSDSPEDLKFRKALENMRYKACTKEDIRCLDGLVSAKKPGRHFIGAAPWRNAAIIVGENKQKDEINRLGSMRFAS # DTSQKLTLFYSEDKIVTKADKGSQKASIPAKKSKVNAMSPDLQKILWDLPPSTHEHHAPPVLPLCYGMPIIIRYNIATELNITKGQRGTVHSWHSKKG # KSGQNVLEVLFVELDNPPSPVKLEGLPLNVVPLVRRENKGYVTLPDDTKINIARNQVDVLLGFSMTAHASQGQSLPVNTADLNTLNGHHAYYTALSRS # RSYHNTAILQGFDPKFITGGASGALRKEFQDLEILDEITRLRYEKKCDSSVQGSTRSLLIESFRKWKGSNYNPPLMHSAIKWSLSDPYNLEKDDPLPW # TIIGSTKTQAGRKAASSTKRDTTATTLSKNTSKSSANALSLSTTAIPLLQIRVQAPKRSASDVDLVDPALPTKKAKHYANNNSTEFDVEYPFGATESN # AASISDTLGIPSPLNVAKLWPSPLHTKSLNAFYRQVSQVTTLKWSNNSCAYDSLFLILRQVWKETTYDVISYVKLPTIMDGFRQHALGETSLEMVRDN # FRRSVQTQRNLQWGAYTSTQDVLAQLLRTSRPCFDASLNCENGHIPQRIPHRPQATQLHPPFIQPPTSASSWFTDIPRYEFGPRCITCHSRVYKQHIL # NSAPCIISFNIDGVRPFLIDSHISRDINNETVHYRLVGVSYYSFNDMHFLSRIITGMGEIFVHDGMRDGGNMVFEANAITHVDLLCCRDYTASALIYM # RL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g749 ### # start gene g750 Scaffold_2 AUGUSTUS gene 3545744 3547639 0.69 - . g750 Scaffold_2 AUGUSTUS transcript 3545744 3547639 0.69 - . g750.t1 Scaffold_2 AUGUSTUS stop_codon 3545744 3545746 . - 0 transcript_id "g750.t1"; gene_id "g750"; Scaffold_2 AUGUSTUS CDS 3545744 3547639 0.69 - 0 transcript_id "g750.t1"; gene_id "g750"; Scaffold_2 AUGUSTUS start_codon 3547637 3547639 . - 0 transcript_id "g750.t1"; gene_id "g750"; # protein sequence = [MTVYVKQGEPLTGKCSRLVRAARTPEVRVNVDWGLGEKEEQIDEPDDFEFVDNPTPESATPVNPPSANISLFDPDSDD # MDVDPSINPILHPTGPPPKPNPTLPPPPRIQQSPLASQIPSIFPGSRTQIYAIVRTPKNDTVSSMTTEIKVRGVVTTTGALVELVVPVSKVLSSPTVD # ATLGFPFLHTLAAKALIKDREEGKHAFPPSVSALFDSPNLNTELKEAYLEKDIIRLGTEYHLASRHTSFLAVDRRSSRGQGFLNIVPTMLFGSASSST # TIGRTLFGGGGGVGFGGFGSSGGPRSSSANTRSRGYGPAAVAMSMTSNTVHSNASFRMGSMASSQGPIPYSIKSGGRALFGSSSPPAFGSSTVPPPPT # TAPVPFGALPPPPPGHPPQLIFGRMASFRNVSSSPPLAPPAPAPSSPNFSPSASPMANSSFFGSTADDSGEEDADGSVQNNISPKSSVIHSPDNFIFI # RFLSHSWYYCSTTPTHSGSLLAAVARLQQWHGGFKLTSTLLQLLGEALNVNILLLLGSDPNDNNILVKDFAKKLESQVGIEDPDVGATLFALVWMEKY # NKASGSRVVDDSQDDDDETRDMREKAQEWVKSQLRPGADSGDEQIRRRLGELKGGVERMLGLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g750 ### # start gene g751 Scaffold_2 AUGUSTUS gene 3562195 3563055 0.82 + . g751 Scaffold_2 AUGUSTUS transcript 3562195 3563055 0.82 + . g751.t1 Scaffold_2 AUGUSTUS start_codon 3562195 3562197 . + 0 transcript_id "g751.t1"; gene_id "g751"; Scaffold_2 AUGUSTUS CDS 3562195 3562398 0.82 + 0 transcript_id "g751.t1"; gene_id "g751"; Scaffold_2 AUGUSTUS CDS 3562489 3562526 0.99 + 0 transcript_id "g751.t1"; gene_id "g751"; Scaffold_2 AUGUSTUS CDS 3562644 3563055 0.99 + 1 transcript_id "g751.t1"; gene_id "g751"; Scaffold_2 AUGUSTUS stop_codon 3563053 3563055 . + 0 transcript_id "g751.t1"; gene_id "g751"; # protein sequence = [MHSGRKGSCVALWLSFSAVATPAAGGWPDKIVAPSAVPFEPGYPVPRALTIKEIEEVVVAFKNSAQRATSTVEASKTV # SDFVSATDCLEQENYPSWKLPDTIELAKIVREHGVDVLDVSSGGQSAAQTINVFDIQSVYAKQVKDVVGDSLLVGCLGGITSGKVAEKYLQEKRGDMC # FVGRNFLEKPGTAWDFAEELDESVHMSKQLEWPFIGRGKRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g751 ### # start gene g752 Scaffold_2 AUGUSTUS gene 3574896 3575281 0.65 + . g752 Scaffold_2 AUGUSTUS transcript 3574896 3575281 0.65 + . g752.t1 Scaffold_2 AUGUSTUS start_codon 3574896 3574898 . + 0 transcript_id "g752.t1"; gene_id "g752"; Scaffold_2 AUGUSTUS CDS 3574896 3574922 0.65 + 0 transcript_id "g752.t1"; gene_id "g752"; Scaffold_2 AUGUSTUS CDS 3574985 3575281 0.66 + 0 transcript_id "g752.t1"; gene_id "g752"; Scaffold_2 AUGUSTUS stop_codon 3575279 3575281 . + 0 transcript_id "g752.t1"; gene_id "g752"; # protein sequence = [MLQLQRPGQTIATGNTLPQPQSNGSLDGFLNMPGHDVGIGQEITKRNFSVHGDHRGVDVGEWLIPSFGMGRILEAVIK # RILKLSLASILGLVVVPEQGSKFPLPTTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g752 ### # start gene g753 Scaffold_2 AUGUSTUS gene 3577289 3578145 0.4 + . g753 Scaffold_2 AUGUSTUS transcript 3577289 3578145 0.4 + . g753.t1 Scaffold_2 AUGUSTUS start_codon 3577289 3577291 . + 0 transcript_id "g753.t1"; gene_id "g753"; Scaffold_2 AUGUSTUS CDS 3577289 3577449 0.4 + 0 transcript_id "g753.t1"; gene_id "g753"; Scaffold_2 AUGUSTUS CDS 3577563 3578145 0.81 + 1 transcript_id "g753.t1"; gene_id "g753"; Scaffold_2 AUGUSTUS stop_codon 3578143 3578145 . + 0 transcript_id "g753.t1"; gene_id "g753"; # protein sequence = [MVSSMGNSAACPVDVDEFESQAESMSIDIIADQSVIAIVSVHPPARLEIPSERKSPETKGIKIDVKGDMDVQLSSAVV # EGEIGKPLSTSVFEAPLDNPADVHGMYDVCSDSETDMVIQISPTTDEGEVAIGTDLESGAVTMNCCETEAESLDSQMDYDTTENFHVPSDNISPTSAT # EFDIAVLVEDDMFPTNHLSELSVVQDHASHTDSLSDARLNDEAISEDQEYSTHNSSVTTDTDPNFKAPFEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g753 ### # start gene g754 Scaffold_2 AUGUSTUS gene 3608071 3608770 0.33 - . g754 Scaffold_2 AUGUSTUS transcript 3608071 3608770 0.33 - . g754.t1 Scaffold_2 AUGUSTUS stop_codon 3608071 3608073 . - 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_2 AUGUSTUS CDS 3608071 3608628 0.33 - 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_2 AUGUSTUS CDS 3608723 3608770 0.39 - 0 transcript_id "g754.t1"; gene_id "g754"; Scaffold_2 AUGUSTUS start_codon 3608768 3608770 . - 0 transcript_id "g754.t1"; gene_id "g754"; # protein sequence = [MDSSAIILQGCCLPSLQTAVEDTPQVTAEFVQQANDSQHSGSDSGFKLLKSAQLPRKLAREVGTSHPKSYSQIPGVKG # FYGIPSLVAVGNSYVCYHLNQDSRTRGEWVAGQIQHIFEHEEKIKLAIARSKPLVGRSDPFIQFGAQGFDARTVSSHFYDNCDIVPVDLIMGHAARWE # LQPGFIVILSLNRVSYVAHLHLPIH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g754 ### # start gene g755 Scaffold_2 AUGUSTUS gene 3614800 3615849 0.68 - . g755 Scaffold_2 AUGUSTUS transcript 3614800 3615849 0.68 - . g755.t1 Scaffold_2 AUGUSTUS stop_codon 3614800 3614802 . - 0 transcript_id "g755.t1"; gene_id "g755"; Scaffold_2 AUGUSTUS CDS 3614800 3615121 0.96 - 1 transcript_id "g755.t1"; gene_id "g755"; Scaffold_2 AUGUSTUS CDS 3615234 3615340 0.84 - 0 transcript_id "g755.t1"; gene_id "g755"; Scaffold_2 AUGUSTUS CDS 3615577 3615849 0.83 - 0 transcript_id "g755.t1"; gene_id "g755"; Scaffold_2 AUGUSTUS start_codon 3615847 3615849 . - 0 transcript_id "g755.t1"; gene_id "g755"; # protein sequence = [MGIKHAAVNHIIQHTAAAGPPTTTTLHPHIVVQAQTSSTDSLSARPCAKLAQEQETSILSPTFPFPVSSSSDVKPHIS # GFAGLNKSLRHAPANMSSDDDEVDAEDTIISQVDLLSLFNHMCADFCSFTPFTKKSNVAGVPPEPDPGSDDSDDSDDSDDSGDGTAGPNITDGEDAEE # NNSEDEEENNSEDEEENNSEEEEESNKHIIAEKWRLMPFQKKSVKRNVNVRMFNHLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g755 ### # start gene g756 Scaffold_2 AUGUSTUS gene 3631384 3632340 0.94 - . g756 Scaffold_2 AUGUSTUS transcript 3631384 3632340 0.94 - . g756.t1 Scaffold_2 AUGUSTUS stop_codon 3631384 3631386 . - 0 transcript_id "g756.t1"; gene_id "g756"; Scaffold_2 AUGUSTUS CDS 3631384 3632340 0.94 - 0 transcript_id "g756.t1"; gene_id "g756"; Scaffold_2 AUGUSTUS start_codon 3632338 3632340 . - 0 transcript_id "g756.t1"; gene_id "g756"; # protein sequence = [MTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLH # AAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIG # YAQVNPQTFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAIILALPADPSSVAGLELAPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLR # YFHDHPLSAISARTALSKLYVVNTPGPRSEFVRDYVTLHYLWSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g756 ### # start gene g757 Scaffold_2 AUGUSTUS gene 3640983 3641546 0.94 + . g757 Scaffold_2 AUGUSTUS transcript 3640983 3641546 0.94 + . g757.t1 Scaffold_2 AUGUSTUS start_codon 3640983 3640985 . + 0 transcript_id "g757.t1"; gene_id "g757"; Scaffold_2 AUGUSTUS CDS 3640983 3641546 0.94 + 0 transcript_id "g757.t1"; gene_id "g757"; Scaffold_2 AUGUSTUS stop_codon 3641544 3641546 . + 0 transcript_id "g757.t1"; gene_id "g757"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIEIGLKMSDIDLRERFFTA # LHQRSDNTSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g757 ### # start gene g758 Scaffold_2 AUGUSTUS gene 3644128 3645912 0.42 + . g758 Scaffold_2 AUGUSTUS transcript 3644128 3645912 0.42 + . g758.t1 Scaffold_2 AUGUSTUS start_codon 3644128 3644130 . + 0 transcript_id "g758.t1"; gene_id "g758"; Scaffold_2 AUGUSTUS CDS 3644128 3645912 0.42 + 0 transcript_id "g758.t1"; gene_id "g758"; Scaffold_2 AUGUSTUS stop_codon 3645910 3645912 . + 0 transcript_id "g758.t1"; gene_id "g758"; # protein sequence = [MLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVH # HVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHD # HPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPC # TSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVI # NSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLG # DRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSW # EPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g758 ### # start gene g759 Scaffold_2 AUGUSTUS gene 3653551 3654061 0.56 + . g759 Scaffold_2 AUGUSTUS transcript 3653551 3654061 0.56 + . g759.t1 Scaffold_2 AUGUSTUS start_codon 3653551 3653553 . + 0 transcript_id "g759.t1"; gene_id "g759"; Scaffold_2 AUGUSTUS CDS 3653551 3653727 0.56 + 0 transcript_id "g759.t1"; gene_id "g759"; Scaffold_2 AUGUSTUS CDS 3653783 3654061 0.79 + 0 transcript_id "g759.t1"; gene_id "g759"; Scaffold_2 AUGUSTUS stop_codon 3654059 3654061 . + 0 transcript_id "g759.t1"; gene_id "g759"; # protein sequence = [MSVFLQKPSELPELDLVTGVRGVEVHQSAKTQIWPNGLETILPTLIKEKENLFANILEYDQERVAWMADPKNQTPPSN # SIVRYLDRKLYTDKGLIEDIRKLTAWGYVVVVSGAIPDHGKDLLTLEEITYELGTGVSEGQVVSYHGKDSYIH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g759 ### # start gene g760 Scaffold_2 AUGUSTUS gene 3663670 3664680 1 + . g760 Scaffold_2 AUGUSTUS transcript 3663670 3664680 1 + . g760.t1 Scaffold_2 AUGUSTUS start_codon 3663670 3663672 . + 0 transcript_id "g760.t1"; gene_id "g760"; Scaffold_2 AUGUSTUS CDS 3663670 3664680 1 + 0 transcript_id "g760.t1"; gene_id "g760"; Scaffold_2 AUGUSTUS stop_codon 3664678 3664680 . + 0 transcript_id "g760.t1"; gene_id "g760"; # protein sequence = [MGHINEEARTLDTSKTQQQSTQLNAQTPPLPGCDHDVTPNTSFHAESLGIVSRNYRQNLSSSMTSLLLLFSDSQSQED # LGNTDLVSVYFPPASETNTHDLKVSTRPNPGNQIHVASQSAVSGRKADWISILNAHFMTKAVPNTVLYPEDAIDDKQARSWLPQAFNYVNVDLGSQYA # SLITAWIALERSTHWNTHAQVRLSTIKRPTLLGKWVERKRYSVRGNEPNIEQNCGFEFAEEFEIWWISLQPGWRQGASGNKLVSPIPISKDQDWKGLD # KFGLNGWFGLVVCLKWLGINLRSRQMAALEVETTKWIDMVVDVCSMMEALTLYRSTLLEHSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g760 ### # start gene g761 Scaffold_2 AUGUSTUS gene 3675184 3676234 0.59 - . g761 Scaffold_2 AUGUSTUS transcript 3675184 3676234 0.59 - . g761.t1 Scaffold_2 AUGUSTUS stop_codon 3675184 3675186 . - 0 transcript_id "g761.t1"; gene_id "g761"; Scaffold_2 AUGUSTUS CDS 3675184 3675513 1 - 0 transcript_id "g761.t1"; gene_id "g761"; Scaffold_2 AUGUSTUS CDS 3675585 3675993 0.96 - 1 transcript_id "g761.t1"; gene_id "g761"; Scaffold_2 AUGUSTUS CDS 3676062 3676234 0.6 - 0 transcript_id "g761.t1"; gene_id "g761"; Scaffold_2 AUGUSTUS start_codon 3676232 3676234 . - 0 transcript_id "g761.t1"; gene_id "g761"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFTVRIPENSRRSSSISPCGSAKEWFVPDILDPDLDSLP # AWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRID # NRYWKREETRKREAGKPFPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSKKERRMKNNLCLFCGGKHQIADCNKR # KARESKGRAAEVEETPEATVEVVEEELEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g761 ### # start gene g762 Scaffold_2 AUGUSTUS gene 3689852 3690448 0.51 + . g762 Scaffold_2 AUGUSTUS transcript 3689852 3690448 0.51 + . g762.t1 Scaffold_2 AUGUSTUS start_codon 3689852 3689854 . + 0 transcript_id "g762.t1"; gene_id "g762"; Scaffold_2 AUGUSTUS CDS 3689852 3690448 0.51 + 0 transcript_id "g762.t1"; gene_id "g762"; Scaffold_2 AUGUSTUS stop_codon 3690446 3690448 . + 0 transcript_id "g762.t1"; gene_id "g762"; # protein sequence = [MDFGYSMHPWTGHDFDNWYQAHGMITMFDLPHDEFNFPTKILSRLVFDDDGRVDGIPCLIKLQQGALKKLNGWINGAT # KGKGKETEVKGEEEVKRDKEREANRRKKEQEGRSRIIQANITRKERLLENSVRDAKDAVQQAEEDIRDNRDALTAIQRKRRLKQLKKELKQKEVALQS # LKDSETKTLENCRKGLKGCAVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g762 ### # start gene g763 Scaffold_2 AUGUSTUS gene 3691645 3692040 0.81 + . g763 Scaffold_2 AUGUSTUS transcript 3691645 3692040 0.81 + . g763.t1 Scaffold_2 AUGUSTUS start_codon 3691645 3691647 . + 0 transcript_id "g763.t1"; gene_id "g763"; Scaffold_2 AUGUSTUS CDS 3691645 3692040 0.81 + 0 transcript_id "g763.t1"; gene_id "g763"; Scaffold_2 AUGUSTUS stop_codon 3692038 3692040 . + 0 transcript_id "g763.t1"; gene_id "g763"; # protein sequence = [MARTKIRSPTLGDCRLYDAATGQDLILDGSSAQVLIADIHASVNLSQRFTNTSYTTISSAVYTFGLMAGAAVCGFEMI # RQDGTRVEGVVKEKEAAKKEYEQAIQAGKTASLGQQETEDGEYLVFSTLIKDC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g763 ### # start gene g764 Scaffold_2 AUGUSTUS gene 3692829 3693850 0.6 + . g764 Scaffold_2 AUGUSTUS transcript 3692829 3693850 0.6 + . g764.t1 Scaffold_2 AUGUSTUS start_codon 3692829 3692831 . + 0 transcript_id "g764.t1"; gene_id "g764"; Scaffold_2 AUGUSTUS CDS 3692829 3692925 0.68 + 0 transcript_id "g764.t1"; gene_id "g764"; Scaffold_2 AUGUSTUS CDS 3692997 3693850 0.72 + 2 transcript_id "g764.t1"; gene_id "g764"; Scaffold_2 AUGUSTUS stop_codon 3693848 3693850 . + 0 transcript_id "g764.t1"; gene_id "g764"; # protein sequence = [MTFYSSMQADYGGTEIASALSLVYSSLPKPLAQRDLYPSISKPDSNDPVSFIRVFTVGIGDGASSDTCDSIARAGNGF # AVYVKQGEPVAGKCARVVRAARTPMVVDVMVDWTGDQGADHGEQDGIEGVSNDDFEIVDNPGKGIQATTESLVPVSAVSLFNNDDDGDDKVMSEATGP # PPAPDPQLPPPPKIQQSPLILRNIFPGTRTQVYAIVRTPQNESGTKGEELPVTVKIKGVVSTTRAPVELVVPVSRFLRSPFKPRTQPQSGDDTGLNSG # LGNVNSQPFLHVIAAKALIIDRQDGRHAFLIPLLASSRTIKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g764 ### # start gene g765 Scaffold_2 AUGUSTUS gene 3694042 3694755 0.72 + . g765 Scaffold_2 AUGUSTUS transcript 3694042 3694755 0.72 + . g765.t1 Scaffold_2 AUGUSTUS start_codon 3694042 3694044 . + 0 transcript_id "g765.t1"; gene_id "g765"; Scaffold_2 AUGUSTUS CDS 3694042 3694755 0.72 + 0 transcript_id "g765.t1"; gene_id "g765"; Scaffold_2 AUGUSTUS stop_codon 3694753 3694755 . + 0 transcript_id "g765.t1"; gene_id "g765"; # protein sequence = [MAVQSQRAGSGKAARKQLAPRAARKAAASISSSSFAGELPGPRPLYSGKPPPPPAWGLPQSWNAESSVDVSEFQRISD # SDGNDRPVKTMNLNGASSSSSFSDPTATASGPSSSSTYTPSMQTRQQARGRVVERERERTGQLRTAGFARTAPATTPLTTPTTAFVASLSPVSTSPAS # KSSTDITTSDRLTAIARLQKFNGQLSLTSPLLVLLEINESVQEVERKLAAVDVSGNVGATV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g765 ### # start gene g766 Scaffold_2 AUGUSTUS gene 3699539 3700015 1 - . g766 Scaffold_2 AUGUSTUS transcript 3699539 3700015 1 - . g766.t1 Scaffold_2 AUGUSTUS stop_codon 3699539 3699541 . - 0 transcript_id "g766.t1"; gene_id "g766"; Scaffold_2 AUGUSTUS CDS 3699539 3700015 1 - 0 transcript_id "g766.t1"; gene_id "g766"; Scaffold_2 AUGUSTUS start_codon 3700013 3700015 . - 0 transcript_id "g766.t1"; gene_id "g766"; # protein sequence = [MQLSLDAVDSASVSVDNGESSSNSTTYTSNSTSTASSTSSAVSAYYSMSSGSNSSALSSIDSSNANIYYYNFFRRSAS # AAPTTTKPTSIPQAISSAKLAASSASASASKTTSSSVSNSTSSAGNSMSASTGIARAQVLPLPHLQLVYNSADASRSTPD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g766 ### # start gene g767 Scaffold_2 AUGUSTUS gene 3707366 3708631 0.33 - . g767 Scaffold_2 AUGUSTUS transcript 3707366 3708631 0.33 - . g767.t1 Scaffold_2 AUGUSTUS stop_codon 3707366 3707368 . - 0 transcript_id "g767.t1"; gene_id "g767"; Scaffold_2 AUGUSTUS CDS 3707366 3708035 0.74 - 1 transcript_id "g767.t1"; gene_id "g767"; Scaffold_2 AUGUSTUS CDS 3708085 3708505 0.46 - 2 transcript_id "g767.t1"; gene_id "g767"; Scaffold_2 AUGUSTUS CDS 3708580 3708631 0.45 - 0 transcript_id "g767.t1"; gene_id "g767"; Scaffold_2 AUGUSTUS start_codon 3708629 3708631 . - 0 transcript_id "g767.t1"; gene_id "g767"; # protein sequence = [MSLDSAVSLTQTSQCIVTQASGYNHSYLDQHGINIIALSSFPSYADINEGSKAGWADAVSLFALLGSTPEELAGSSSL # PSISSWFRLPLTVSAKLDNKDEYGDSECSDLDNDSEPDPSLQTNIDTAEDLDPDTDHGQHRLMSYHFAAIALEINKDMTSGSLPEEDEQMIAESISND # IECIGEMLAASLPTINHVDPARPDFPSLDQVDLTQLYRIRKAHETRLAASVTRQTEFSKSDDSKVNGQEKSTLSAEAELRLAFQQIINEESKKDRGEG # TGSSRKLRYTTVAKGRGAMDTEDIELGNVANAAAVATNTANSVRAYYISSHYIVLILNYFCRCSQNVKTHSNLSYVSLLSSRMAGSPKLCLSVSTKLA # ALVMVLPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g767 ### # start gene g768 Scaffold_2 AUGUSTUS gene 3710511 3711304 0.38 - . g768 Scaffold_2 AUGUSTUS transcript 3710511 3711304 0.38 - . g768.t1 Scaffold_2 AUGUSTUS stop_codon 3710511 3710513 . - 0 transcript_id "g768.t1"; gene_id "g768"; Scaffold_2 AUGUSTUS CDS 3710511 3711153 0.74 - 1 transcript_id "g768.t1"; gene_id "g768"; Scaffold_2 AUGUSTUS CDS 3711249 3711304 0.4 - 0 transcript_id "g768.t1"; gene_id "g768"; Scaffold_2 AUGUSTUS start_codon 3711302 3711304 . - 0 transcript_id "g768.t1"; gene_id "g768"; # protein sequence = [MEVSNSLNPALETIPSKYIPSSESTSINRAAAEQQISPLPSFNDDSEASDFLISDDKDDTDSVATVNTDDEFYASSKG # NGVSRSAAWTRKQNEKYKQDKNYNASSRKLRARMRKFVTKVKRLDPHAEVVDSKHIHHSKCGKIGTQDAPFKLSNFQKHIESHCNGRAESAGAGSHSL # MRWFSKPGTSQLSSALESRIRACPGLSEADHPGIGILLDHTGALGGGAPSVTVLAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g768 ### # start gene g769 Scaffold_2 AUGUSTUS gene 3735572 3737125 0.29 - . g769 Scaffold_2 AUGUSTUS transcript 3735572 3737125 0.29 - . g769.t1 Scaffold_2 AUGUSTUS stop_codon 3735572 3735574 . - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_2 AUGUSTUS CDS 3735572 3735841 0.93 - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_2 AUGUSTUS CDS 3736054 3736449 0.53 - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_2 AUGUSTUS CDS 3736604 3737125 0.5 - 0 transcript_id "g769.t1"; gene_id "g769"; Scaffold_2 AUGUSTUS start_codon 3737123 3737125 . - 0 transcript_id "g769.t1"; gene_id "g769"; # protein sequence = [MHSIARCKLIMAVPKLLQLYPSSILPYPNLSPVLLQSLLTDGSAWDVPTCVSHTQNAISTLPIPQPDSNDPVSFIRVF # TVGIGDGASSDTCDSIARAGNGFAVYVKQGEPVAGKCARVVRAARTPMVVDVGRLDWRSGRGSWRTGWIEGVSNDDFEIVDNPGKGIQATTESLVPVY # AMAVQSQRAGSGKAARKQLAPRAARKAAASISSSSFAGELPEPRPLYSGKPPPPPAWGPPQSWNAESSVDVSEFQRISDSDGNDRPVKRMNLNGASSP # SSLSDPTATASGPSSSSTYTPSMQTRQQARGRLSLTLPLLVLLEINESVQEVERKLAAVDVSGDVGATVLTWAWMEKMRIRGVGVGEEILGLIEKARE # WVESELAGLLTFEDVKQKVLSKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g769 ### # start gene g770 Scaffold_2 AUGUSTUS gene 3754369 3754977 0.86 + . g770 Scaffold_2 AUGUSTUS transcript 3754369 3754977 0.86 + . g770.t1 Scaffold_2 AUGUSTUS start_codon 3754369 3754371 . + 0 transcript_id "g770.t1"; gene_id "g770"; Scaffold_2 AUGUSTUS CDS 3754369 3754977 0.86 + 0 transcript_id "g770.t1"; gene_id "g770"; Scaffold_2 AUGUSTUS stop_codon 3754975 3754977 . + 0 transcript_id "g770.t1"; gene_id "g770"; # protein sequence = [MNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLK # EFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPT # MTGRNTGHAPAHTAHIYPCRPSRQWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g770 ### # start gene g771 Scaffold_2 AUGUSTUS gene 3755687 3756061 0.57 + . g771 Scaffold_2 AUGUSTUS transcript 3755687 3756061 0.57 + . g771.t1 Scaffold_2 AUGUSTUS start_codon 3755687 3755689 . + 0 transcript_id "g771.t1"; gene_id "g771"; Scaffold_2 AUGUSTUS CDS 3755687 3756061 0.57 + 0 transcript_id "g771.t1"; gene_id "g771"; Scaffold_2 AUGUSTUS stop_codon 3756059 3756061 . + 0 transcript_id "g771.t1"; gene_id "g771"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGNNPNVGCF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g771 ### # start gene g772 Scaffold_2 AUGUSTUS gene 3756314 3757344 0.85 + . g772 Scaffold_2 AUGUSTUS transcript 3756314 3757344 0.85 + . g772.t1 Scaffold_2 AUGUSTUS start_codon 3756314 3756316 . + 0 transcript_id "g772.t1"; gene_id "g772"; Scaffold_2 AUGUSTUS CDS 3756314 3756934 0.85 + 0 transcript_id "g772.t1"; gene_id "g772"; Scaffold_2 AUGUSTUS CDS 3757018 3757344 0.97 + 0 transcript_id "g772.t1"; gene_id "g772"; Scaffold_2 AUGUSTUS stop_codon 3757342 3757344 . + 0 transcript_id "g772.t1"; gene_id "g772"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMAR # LPRRRSPITVKKFFVLTIVIGNARKLESVRLPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLF # CGGKHQIADCNKRKARESKGRAAEVEETPEATEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g772 ### # start gene g773 Scaffold_2 AUGUSTUS gene 3760156 3761222 0.84 + . g773 Scaffold_2 AUGUSTUS transcript 3760156 3761222 0.84 + . g773.t1 Scaffold_2 AUGUSTUS start_codon 3760156 3760158 . + 0 transcript_id "g773.t1"; gene_id "g773"; Scaffold_2 AUGUSTUS CDS 3760156 3760628 0.89 + 0 transcript_id "g773.t1"; gene_id "g773"; Scaffold_2 AUGUSTUS CDS 3760715 3761222 0.92 + 1 transcript_id "g773.t1"; gene_id "g773"; Scaffold_2 AUGUSTUS stop_codon 3761220 3761222 . + 0 transcript_id "g773.t1"; gene_id "g773"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKA # LSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPYFRSPSSPITTLPMLPLVLLHSSLTKDTTQISPFGPSSSRYKEQADRKRISHPEF # PIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSKL # DRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g773 ### # start gene g774 Scaffold_2 AUGUSTUS gene 3764794 3765855 0.86 + . g774 Scaffold_2 AUGUSTUS transcript 3764794 3765855 0.86 + . g774.t1 Scaffold_2 AUGUSTUS start_codon 3764794 3764796 . + 0 transcript_id "g774.t1"; gene_id "g774"; Scaffold_2 AUGUSTUS CDS 3764794 3765855 0.86 + 0 transcript_id "g774.t1"; gene_id "g774"; Scaffold_2 AUGUSTUS stop_codon 3765853 3765855 . + 0 transcript_id "g774.t1"; gene_id "g774"; # protein sequence = [MSRLHTPHLVASTTDSPIQELSNEGSQREPNHTEADLEENEIITATEESPIQPNTSQSQNASGMGESGDIGRTNRGSM # VLSRVHLFSQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESASERLPAHKPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPL # KSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSP # ATFQALMNAIFADLIAAGKVAVYLDDILIFSNNLKEHRQVVREVLTRLEKHDLYLHPEKCEFETATDRIPWTYHFQKGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g774 ### # start gene g775 Scaffold_2 AUGUSTUS gene 3766036 3766692 0.5 + . g775 Scaffold_2 AUGUSTUS transcript 3766036 3766692 0.5 + . g775.t1 Scaffold_2 AUGUSTUS start_codon 3766036 3766038 . + 0 transcript_id "g775.t1"; gene_id "g775"; Scaffold_2 AUGUSTUS CDS 3766036 3766692 0.5 + 0 transcript_id "g775.t1"; gene_id "g775"; Scaffold_2 AUGUSTUS stop_codon 3766690 3766692 . + 0 transcript_id "g775.t1"; gene_id "g775"; # protein sequence = [MQQEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYNREMLA # IIEALKDWRNFLEGLPQPFDIITDHSNLKFWHTTQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHYVSDSDDNQQQTVLKPGDFTKIA # ASILQNPLEDRIRKASEWEAQVLEGLETVKKHGLQRLANGNS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g775 ### # start gene g776 Scaffold_2 AUGUSTUS gene 3776241 3777038 0.84 - . g776 Scaffold_2 AUGUSTUS transcript 3776241 3777038 0.84 - . g776.t1 Scaffold_2 AUGUSTUS stop_codon 3776241 3776243 . - 0 transcript_id "g776.t1"; gene_id "g776"; Scaffold_2 AUGUSTUS CDS 3776241 3776395 0.89 - 2 transcript_id "g776.t1"; gene_id "g776"; Scaffold_2 AUGUSTUS CDS 3776543 3776587 0.94 - 2 transcript_id "g776.t1"; gene_id "g776"; Scaffold_2 AUGUSTUS CDS 3776837 3777038 0.92 - 0 transcript_id "g776.t1"; gene_id "g776"; Scaffold_2 AUGUSTUS start_codon 3777036 3777038 . - 0 transcript_id "g776.t1"; gene_id "g776"; # protein sequence = [MWDGAGTGWLWSGHDKKAAGNVAGDGTLSEEIAEAIRELTIGNGEGNATLSTELEQGLHNLTLSDHKALDGTVHFIPD # YAPKMTDLAIHVPDITLVNASMNVGSDRFKLTPRPFNAGDMDVDLAVELTSKYLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g776 ### # start gene g777 Scaffold_2 AUGUSTUS gene 3778122 3778706 0.97 + . g777 Scaffold_2 AUGUSTUS transcript 3778122 3778706 0.97 + . g777.t1 Scaffold_2 AUGUSTUS start_codon 3778122 3778124 . + 0 transcript_id "g777.t1"; gene_id "g777"; Scaffold_2 AUGUSTUS CDS 3778122 3778706 0.97 + 0 transcript_id "g777.t1"; gene_id "g777"; Scaffold_2 AUGUSTUS stop_codon 3778704 3778706 . + 0 transcript_id "g777.t1"; gene_id "g777"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNPAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIEKGTRGSTDPLTVRQQRNFQRGGYPLPY # PNNLERHPGGYQHLQYSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g777 ### # start gene g778 Scaffold_2 AUGUSTUS gene 3782624 3783226 0.47 + . g778 Scaffold_2 AUGUSTUS transcript 3782624 3783226 0.47 + . g778.t1 Scaffold_2 AUGUSTUS start_codon 3782624 3782626 . + 0 transcript_id "g778.t1"; gene_id "g778"; Scaffold_2 AUGUSTUS CDS 3782624 3783226 0.47 + 0 transcript_id "g778.t1"; gene_id "g778"; Scaffold_2 AUGUSTUS stop_codon 3783224 3783226 . + 0 transcript_id "g778.t1"; gene_id "g778"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVPQQTPEAPLRAPRTRVKLEEVKDEEYEASQPG # PHKLFPSDKDLGPDDPILMGSTNG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g778 ### # start gene g779 Scaffold_2 AUGUSTUS gene 3787089 3789696 0.62 - . g779 Scaffold_2 AUGUSTUS transcript 3787089 3789696 0.62 - . g779.t1 Scaffold_2 AUGUSTUS stop_codon 3787089 3787091 . - 0 transcript_id "g779.t1"; gene_id "g779"; Scaffold_2 AUGUSTUS CDS 3787089 3788220 0.76 - 1 transcript_id "g779.t1"; gene_id "g779"; Scaffold_2 AUGUSTUS CDS 3788384 3789696 0.63 - 0 transcript_id "g779.t1"; gene_id "g779"; Scaffold_2 AUGUSTUS start_codon 3789694 3789696 . - 0 transcript_id "g779.t1"; gene_id "g779"; # protein sequence = [MSAPLRRSSSRTRSPQLPILTTIGEVPSPDLESDGEAEQDQLAFTIEFPSRPQLQLFETVFNTGKPLSGYCQDDPLWP # LLAEVASPCSNCSKSPAKCKVLPNSPRCTNCSVKKTCSLGKILRYRYFARRCNQDLAYSRRFLELHGTPAHQSTWGIPMVTWRQYDAALHERTSSTST # LLELNMLDDQDAADVDQQELRDFLALQQEEAAVAAKRKRDLSPLPVAGPSSKKVRSNASKKRPRRRSPVQETAEESPRRVRLVVPPVRSLPVTTSTPL # PPRAFPSSMEVPDADLSVQGHSNLVRLAAVAGAQSGLVQQPAVSSSIKGTGQDLLSSNMPPVPRPTLVPRALATHPYRAENQRLAARVRLLESQLSDS # QRENSSLTSALRDTSHALESRQREVEQLRSSSREVREQQVEYRRVLDQFRALDEALPGPPDRVRILLLYQQGVVDESNALATRQRRLVEELQEEVHRA # RGRAAFVEQMIKEYPDEGYYEVVLPPLSQLEGDLHKAREDLRRVATFAHRLYRSEPATVLHHHYRYLGAIIEAVVAFLRRGLDSDDLDTVVHNFQLGL # DYMQAARGVHGDMYMRSLSSIQWFFNNAVDEDEGLYRMVLEHSRFDNDGPFLTAAQHAGFAPPPDSSLEPPLHRRMFALSTALPHSDGAGRWDDIVPA # LPSIDQLTADWEQLMLQYIHHITDTPLPVPDPPVPMSSMGPVPESSGEANVEQSLEAPIVQVSSPSAGSHPPVPLFLSEQESPTSPSPPPCSPVPPLL # FGSVASLSIDLTGDDDELYETEESYAGRIAVAREGTELAVGQGIVKEESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g779 ### # start gene g780 Scaffold_2 AUGUSTUS gene 3791335 3792384 0.31 - . g780 Scaffold_2 AUGUSTUS transcript 3791335 3792384 0.31 - . g780.t1 Scaffold_2 AUGUSTUS stop_codon 3791335 3791337 . - 0 transcript_id "g780.t1"; gene_id "g780"; Scaffold_2 AUGUSTUS CDS 3791335 3791664 0.43 - 0 transcript_id "g780.t1"; gene_id "g780"; Scaffold_2 AUGUSTUS CDS 3791924 3792143 0.81 - 1 transcript_id "g780.t1"; gene_id "g780"; Scaffold_2 AUGUSTUS CDS 3792212 3792384 0.69 - 0 transcript_id "g780.t1"; gene_id "g780"; Scaffold_2 AUGUSTUS start_codon 3792382 3792384 . - 0 transcript_id "g780.t1"; gene_id "g780"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPENSRRSSSISPCGSAKEWFVPDILDPDLDSLP # AWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYISGSTPWLLPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHL # GADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g780 ### # start gene g781 Scaffold_2 AUGUSTUS gene 3795747 3796360 0.75 + . g781 Scaffold_2 AUGUSTUS transcript 3795747 3796360 0.75 + . g781.t1 Scaffold_2 AUGUSTUS start_codon 3795747 3795749 . + 0 transcript_id "g781.t1"; gene_id "g781"; Scaffold_2 AUGUSTUS CDS 3795747 3795829 0.75 + 0 transcript_id "g781.t1"; gene_id "g781"; Scaffold_2 AUGUSTUS CDS 3795913 3796360 0.91 + 1 transcript_id "g781.t1"; gene_id "g781"; Scaffold_2 AUGUSTUS stop_codon 3796358 3796360 . + 0 transcript_id "g781.t1"; gene_id "g781"; # protein sequence = [MDTVEYLGYILSPDGLTMSKEKVQTVLDDIVVPMTRLTRKGASWIWDSSCQEAFENLNAFTSAPILAHWEPNRPLIVE # TDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKGSYTPTGPMVRIFTSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g781 ### # start gene g782 Scaffold_2 AUGUSTUS gene 3796961 3797877 0.5 + . g782 Scaffold_2 AUGUSTUS transcript 3796961 3797877 0.5 + . g782.t1 Scaffold_2 AUGUSTUS start_codon 3796961 3796963 . + 0 transcript_id "g782.t1"; gene_id "g782"; Scaffold_2 AUGUSTUS CDS 3796961 3797257 0.5 + 0 transcript_id "g782.t1"; gene_id "g782"; Scaffold_2 AUGUSTUS CDS 3797341 3797877 0.53 + 0 transcript_id "g782.t1"; gene_id "g782"; Scaffold_2 AUGUSTUS stop_codon 3797875 3797877 . + 0 transcript_id "g782.t1"; gene_id "g782"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKA # LSMELHYTSGYHPEADGQTERFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPE # FPIGSEVFVLAKHIRLLVLLKNSQKNILVLSRSSVDLVLVLRAQAPRLSSPHSPGFPRLTAGAGYAESFPNRTQSPPPPIEVDGEEEYNVAEIRLQAG # QKV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g782 ### # start gene g783 Scaffold_2 AUGUSTUS gene 3800463 3800995 0.34 - . g783 Scaffold_2 AUGUSTUS transcript 3800463 3800995 0.34 - . g783.t1 Scaffold_2 AUGUSTUS stop_codon 3800463 3800465 . - 0 transcript_id "g783.t1"; gene_id "g783"; Scaffold_2 AUGUSTUS CDS 3800463 3800543 0.87 - 0 transcript_id "g783.t1"; gene_id "g783"; Scaffold_2 AUGUSTUS CDS 3800717 3800995 0.34 - 0 transcript_id "g783.t1"; gene_id "g783"; Scaffold_2 AUGUSTUS start_codon 3800993 3800995 . - 0 transcript_id "g783.t1"; gene_id "g783"; # protein sequence = [MSASRTTTTTVTSATTAGPSRSRTTNPPPADPVDDDEEELGEDDDEAIRRAEEKVRRMKARKAAAAAKKKAEEEAARK # AAEEAAARELEERRRPVGEDPDDGGDGDDDDDDEDDRAPCE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g783 ### # start gene g784 Scaffold_2 AUGUSTUS gene 3805075 3805743 0.55 - . g784 Scaffold_2 AUGUSTUS transcript 3805075 3805743 0.55 - . g784.t1 Scaffold_2 AUGUSTUS stop_codon 3805075 3805077 . - 0 transcript_id "g784.t1"; gene_id "g784"; Scaffold_2 AUGUSTUS CDS 3805075 3805743 0.55 - 0 transcript_id "g784.t1"; gene_id "g784"; Scaffold_2 AUGUSTUS start_codon 3805741 3805743 . - 0 transcript_id "g784.t1"; gene_id "g784"; # protein sequence = [MISNAVVDILLIKLIDALLKYEDNLKAFRIPNSQGSYDYDRASMLEAIESLGVPWHPDKGDEDFVTVTQFIGFLWNLE # LKHVSLPNDKCIKYLECIRVFLSNFSNSRVPVSEVESIHGTLCHIAFHLPEGRSHLPQSQISWLRIVVLLKKTMAVSPQKVFSQNFAGGTINFRILPI # TENFDHEVNSRTLVYLLMPPLSGYWYCLQWQLGSIPPPSQLEDSRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g784 ### # start gene g785 Scaffold_2 AUGUSTUS gene 3806627 3807967 0.86 - . g785 Scaffold_2 AUGUSTUS transcript 3806627 3807967 0.86 - . g785.t1 Scaffold_2 AUGUSTUS stop_codon 3806627 3806629 . - 0 transcript_id "g785.t1"; gene_id "g785"; Scaffold_2 AUGUSTUS CDS 3806627 3807967 0.86 - 0 transcript_id "g785.t1"; gene_id "g785"; Scaffold_2 AUGUSTUS start_codon 3807965 3807967 . - 0 transcript_id "g785.t1"; gene_id "g785"; # protein sequence = [MTQHPPLLLRTLLSIRAVDRQRRTHILEIIPILKKLSLERRLQKNYDIERANERGRKKLFIEKKAPAKGSPSASLITI # TEDEWNDIRTTPAIFERVKQWIPRYILAWMARANDMDNLSKGKRTWDVQEGDILENGPEKNPRLMTPIIETTPDPTTSQNVETPEHPHRTGRSHNYLP # LPLFTDNNLTFIHSHSSSFKTSKTLLPGDKERTEVVVLKDLLDRLNIWVPDLEKSDEDEGLSLYKFQLASKNYFAFELSHDPDGQEGTRTNWTRQHFL # FFNNQRDAEKYYQFWKPREYRLREEHCLYNTKFDLTTYNMAWNHVVTDYERSLEAKPRQAPNLSAAPSSSKPFQKGNKGDSFDLCCLGCGKKGHSATD # HSSKHGSLLWARWIKGGKSFVLGLPQGEDKRICYQWNIRGNCKANKGCQDAHVCTFCRSDGHHAFSYTCCSRPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g785 ### # start gene g786 Scaffold_2 AUGUSTUS gene 3833488 3833787 0.69 + . g786 Scaffold_2 AUGUSTUS transcript 3833488 3833787 0.69 + . g786.t1 Scaffold_2 AUGUSTUS start_codon 3833488 3833490 . + 0 transcript_id "g786.t1"; gene_id "g786"; Scaffold_2 AUGUSTUS CDS 3833488 3833787 0.69 + 0 transcript_id "g786.t1"; gene_id "g786"; Scaffold_2 AUGUSTUS stop_codon 3833785 3833787 . + 0 transcript_id "g786.t1"; gene_id "g786"; # protein sequence = [MILTTSGYHPEANGQTERVNQTLEQYIRIYCSYQQDDWSPLLPIAKFTYNNTPNASTGITPFFANKGYHPNITIRPEV # NMKSDLARDFVVNLDELHVFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g786 ### # start gene g787 Scaffold_2 AUGUSTUS gene 3839240 3839623 0.48 - . g787 Scaffold_2 AUGUSTUS transcript 3839240 3839623 0.48 - . g787.t1 Scaffold_2 AUGUSTUS stop_codon 3839240 3839242 . - 0 transcript_id "g787.t1"; gene_id "g787"; Scaffold_2 AUGUSTUS CDS 3839240 3839623 0.48 - 0 transcript_id "g787.t1"; gene_id "g787"; Scaffold_2 AUGUSTUS start_codon 3839621 3839623 . - 0 transcript_id "g787.t1"; gene_id "g787"; # protein sequence = [MPESRVREASEETVLAIRNLSHATATEAVTNLKSRKRFVRGTRGRELKLRTTIENIDNGVQIETEALLDSGATGSCIN # KDFVEQHQLTVKELPVKMPVYNADGTLNKNGSIEGYVQVRMVIGDHAEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g787 ### # start gene g788 Scaffold_2 AUGUSTUS gene 3839865 3840401 0.58 - . g788 Scaffold_2 AUGUSTUS transcript 3839865 3840401 0.58 - . g788.t1 Scaffold_2 AUGUSTUS stop_codon 3839865 3839867 . - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_2 AUGUSTUS CDS 3839865 3840401 0.58 - 0 transcript_id "g788.t1"; gene_id "g788"; Scaffold_2 AUGUSTUS start_codon 3840399 3840401 . - 0 transcript_id "g788.t1"; gene_id "g788"; # protein sequence = [MRDAGYAKDAPYVIRLIEMNVKPKLIDQVYGTSNERIEKFDELKQKIISIDDMWWRREEMRRNWSNRYQRNAGQGPSS # QRWQPQTTQAPITKAPTPAVPTQDRKDGTGTTFKGAGRPMDIDAARRNKECFHCGKQGHIAKFCPEKAPKPQFVRGMWSRMTQEDQEAMAKELGFVLP # QQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g788 ### # start gene g789 Scaffold_2 AUGUSTUS gene 3846062 3846565 0.36 + . g789 Scaffold_2 AUGUSTUS transcript 3846062 3846565 0.36 + . g789.t1 Scaffold_2 AUGUSTUS start_codon 3846062 3846064 . + 0 transcript_id "g789.t1"; gene_id "g789"; Scaffold_2 AUGUSTUS CDS 3846062 3846565 0.36 + 0 transcript_id "g789.t1"; gene_id "g789"; Scaffold_2 AUGUSTUS stop_codon 3846563 3846565 . + 0 transcript_id "g789.t1"; gene_id "g789"; # protein sequence = [MKMKQTNQMKPIKQEEAEVEEEQIETQWGQAPTQDVEVKREETKEIKQEHHAEHDDEHPPMAGSMNSSVDSVRSVHCV # YSMDSADSVYPVNPSPTPALNPNSTPRSDPPSNPNPSSARSVSISISVAGREEEAGEEKQAKEEKKKQKKKRWRLRLRSMRRKRKRKRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g789 ### # start gene g790 Scaffold_2 AUGUSTUS gene 3848843 3850304 0.17 + . g790 Scaffold_2 AUGUSTUS transcript 3848843 3850304 0.17 + . g790.t1 Scaffold_2 AUGUSTUS start_codon 3848843 3848845 . + 0 transcript_id "g790.t1"; gene_id "g790"; Scaffold_2 AUGUSTUS CDS 3848843 3849403 0.19 + 0 transcript_id "g790.t1"; gene_id "g790"; Scaffold_2 AUGUSTUS CDS 3849546 3850304 0.58 + 0 transcript_id "g790.t1"; gene_id "g790"; Scaffold_2 AUGUSTUS stop_codon 3850302 3850304 . + 0 transcript_id "g790.t1"; gene_id "g790"; # protein sequence = [MPMPGKGRKGKKRRVEDKGKRKAKGRSRATSPIIIISDDEEYTEEENMKRGRRDDKGNAYAQAQAQEKEKGKGKARAF # PIPDIPGTFSIFQNDNNNDNNDGDWELPASAYADLDSHVRQHSGFDGGITSLTSRSGSPSGSGVPRSPPGTGPPNHHHPLSLHSLHSLHSLHSLHSPP # SPPPLVSPSASQHLPPCPLSRRVSPSPVPPSLVSPSPVPLPPANPVIPRTTHSADEEDNTLDQQQQIYVIDTDTDTDDQIEIDEIAGVLEAKVNAVES # KSPASRGPDGLVGIEGEKEGEDEEKEGGARVDDAVDPRSKSGRKPKAKPSELTMEALFESLLEGEEDNDEGGNQSTQSRQHTKKTTQNDNKSLNMVKS # KINQPQTRNQYQIQIQIQVQVQIHTRTHTEIQIQTPDRHRRNRILPFIINIYPTSKLQCPATTQAKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g790 ### # start gene g791 Scaffold_2 AUGUSTUS gene 3860284 3860873 0.9 + . g791 Scaffold_2 AUGUSTUS transcript 3860284 3860873 0.9 + . g791.t1 Scaffold_2 AUGUSTUS start_codon 3860284 3860286 . + 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_2 AUGUSTUS CDS 3860284 3860577 0.9 + 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_2 AUGUSTUS CDS 3860616 3860873 0.97 + 0 transcript_id "g791.t1"; gene_id "g791"; Scaffold_2 AUGUSTUS stop_codon 3860871 3860873 . + 0 transcript_id "g791.t1"; gene_id "g791"; # protein sequence = [MTSNSAQEPTSSVPDSSGWSAALYNKNANFVYSPAYTTPVLELLAAKPGERIMDFGCGSGEVTVVIEKIVKGKEGGYI # AAVDFSESMVRIKLDLAAFGVEKAKTQGLPETFVCDIQDLAFPPSSVYSGPREEFDAVFTNATLHWCKRNPSGVIRSAKRILKRKGRFVGEMGGFLNC # IGTTLID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g791 ### # start gene g792 Scaffold_2 AUGUSTUS gene 3864144 3865403 0.64 + . g792 Scaffold_2 AUGUSTUS transcript 3864144 3865403 0.64 + . g792.t1 Scaffold_2 AUGUSTUS start_codon 3864144 3864146 . + 0 transcript_id "g792.t1"; gene_id "g792"; Scaffold_2 AUGUSTUS CDS 3864144 3865403 0.64 + 0 transcript_id "g792.t1"; gene_id "g792"; Scaffold_2 AUGUSTUS stop_codon 3865401 3865403 . + 0 transcript_id "g792.t1"; gene_id "g792"; # protein sequence = [MSTIGNNRSTASSTTNRRSMSSIPMPNVQASLSSNANLAKSTSARRISTPGGQGKRAANDISSNSNSLSTSNSTPISN # KLTTNNLSNLSSSVPRPRAAPSIVSSRRSVAGSRPKAAQERPQSLYAKPTQTETPTPVVLSNDISTHSTSTMTPTKPRPRVTSAVSSLVATPTSSRTR # VLSTPGTPSSVAKAIKATSASPSISLTSPSPMPTPARPSASTTSPSVSASQRTPQRSTSSRMSLQGTPTSAHKKSPARSPSDSVQIVVKAKTSPQHHH # STSSHSSAGLFSPENSVPSVPVGPASNVPSMWTAGEDSFDGDFSMDLDMITEENSDTLLGGDSELVPLLNEINTLHNRKLTSYKRLLERAQHSSAAQL # HALQAEVRMLREQLQNGGGGGGLGIEDCSLETVKMNLTAYLTGRILV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g792 ### # start gene g793 Scaffold_2 AUGUSTUS gene 3867758 3868081 0.9 + . g793 Scaffold_2 AUGUSTUS transcript 3867758 3868081 0.9 + . g793.t1 Scaffold_2 AUGUSTUS start_codon 3867758 3867760 . + 0 transcript_id "g793.t1"; gene_id "g793"; Scaffold_2 AUGUSTUS CDS 3867758 3868081 0.9 + 0 transcript_id "g793.t1"; gene_id "g793"; Scaffold_2 AUGUSTUS stop_codon 3868079 3868081 . + 0 transcript_id "g793.t1"; gene_id "g793"; # protein sequence = [MSIHQDKPGKTKKSSRANGDAEDDDDDDGEDSDSDLHHIITGTKFTESSTGEKYVPYSGVDIDTNCTPVTGAWAALAD # AESIPRLNGNEPVGKVRGLIGSLPPKFGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g793 ### # start gene g794 Scaffold_2 AUGUSTUS gene 3868728 3869935 0.6 + . g794 Scaffold_2 AUGUSTUS transcript 3868728 3869935 0.6 + . g794.t1 Scaffold_2 AUGUSTUS start_codon 3868728 3868730 . + 0 transcript_id "g794.t1"; gene_id "g794"; Scaffold_2 AUGUSTUS CDS 3868728 3868929 0.68 + 0 transcript_id "g794.t1"; gene_id "g794"; Scaffold_2 AUGUSTUS CDS 3868968 3869935 0.73 + 2 transcript_id "g794.t1"; gene_id "g794"; Scaffold_2 AUGUSTUS stop_codon 3869933 3869935 . + 0 transcript_id "g794.t1"; gene_id "g794"; # protein sequence = [MFKTLLTPLRARFDLSPRSPTTRNAPPPPDDDELAPEDFARDVLIELMRNSVENLKQADTRKGKIEVHAQVLAEIQRI # LLQEPQTKEVFRELDGFLVLISVLSTVHHLNFGPVIEPEEQVLADMIECTRLVFSVASDALADHPQNTEYFRTYVGYDSLSSALNGLVTNPQTLNETL # GFLLSFALSEFTAIPGLFCSFRVCTKLDDFDATLAEYDAQLSTAIIGRPEAIYLLWSFISPKSYATLKLFEVLAGANHRNRAILSVPEIVQPLLAHLS # TVQEKKEKTVTQKLAKKLLDMGSSPIIARGMFQRVIKADGTLDMDLLELIRAGMKSRWLEHFSFRDSAGMVVRQEGAKALPVTGFTFMVSMSSIFRAL # YLDVTKRRAPYIDLAVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g794 ### # start gene g795 Scaffold_2 AUGUSTUS gene 3870571 3870843 0.98 - . g795 Scaffold_2 AUGUSTUS transcript 3870571 3870843 0.98 - . g795.t1 Scaffold_2 AUGUSTUS stop_codon 3870571 3870573 . - 0 transcript_id "g795.t1"; gene_id "g795"; Scaffold_2 AUGUSTUS CDS 3870571 3870843 0.98 - 0 transcript_id "g795.t1"; gene_id "g795"; Scaffold_2 AUGUSTUS start_codon 3870841 3870843 . - 0 transcript_id "g795.t1"; gene_id "g795"; # protein sequence = [MIADSGNPIPIPSFTALRIEEGPVGLWDIIIPGDRGDLGLTESDEVGVAGVRGEGESKAAMVEIVKREKGGDRVEADI # ETMQQQQSEYWR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g795 ### # start gene g796 Scaffold_2 AUGUSTUS gene 3879590 3880878 0.55 - . g796 Scaffold_2 AUGUSTUS transcript 3879590 3880878 0.55 - . g796.t1 Scaffold_2 AUGUSTUS stop_codon 3879590 3879592 . - 0 transcript_id "g796.t1"; gene_id "g796"; Scaffold_2 AUGUSTUS CDS 3879590 3879972 0.83 - 2 transcript_id "g796.t1"; gene_id "g796"; Scaffold_2 AUGUSTUS CDS 3880401 3880878 0.6 - 0 transcript_id "g796.t1"; gene_id "g796"; Scaffold_2 AUGUSTUS start_codon 3880876 3880878 . - 0 transcript_id "g796.t1"; gene_id "g796"; # protein sequence = [MMVLSLFRTATSRKSRLLSSYIHLTHQIADFRYPHGPARNPKAVQRGSVQFLSMYPGDPTTPGTPAYENATRTEGLNK # PQIPSLPISQENGEKLLKLAKDGWNGTVRLNNQGNLDFLSLVLRWSKYQLVDERVMPIWNTMAIIPGYIKDEVVMLGNHRDDGSASGSRFHVQASPSL # AHLTYSAALDVPHPTEENKTLWDATQDSGKYFGAREDGNAVLDSEAVAVYEASINAQDELGVGVLGSGSDYTIFLQRIGVRKCLSLMLFDVTIATFCK # RLCIGCKHEPRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g796 ### # start gene g797 Scaffold_2 AUGUSTUS gene 3890515 3891516 0.65 - . g797 Scaffold_2 AUGUSTUS transcript 3890515 3891516 0.65 - . g797.t1 Scaffold_2 AUGUSTUS stop_codon 3890515 3890517 . - 0 transcript_id "g797.t1"; gene_id "g797"; Scaffold_2 AUGUSTUS CDS 3890515 3890945 0.85 - 2 transcript_id "g797.t1"; gene_id "g797"; Scaffold_2 AUGUSTUS CDS 3891216 3891516 0.78 - 0 transcript_id "g797.t1"; gene_id "g797"; Scaffold_2 AUGUSTUS start_codon 3891514 3891516 . - 0 transcript_id "g797.t1"; gene_id "g797"; # protein sequence = [MDNNLMHFDTCEPSFASTGSARYPPHQSICLGGILCFPNLQLQEAGSGTDSDCFVSKLSLHEFVIVLVLTSPSRIARA # VLIALVTFIPVLASVLSFVSFRXELAESYTIDFERKHAVEVDGDFSWESAGKIVETKFEKGAKNDHVPNSGVRSEKDGKPAKAVSKSTQDETLPTTFQ # DIKTTQDIDSDPPKEDEPFVLRNLKFNVPKGSFVAIVGTVGSGKVRPNPYNPTPPRLIVPFLCRVQF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g797 ### # start gene g798 Scaffold_2 AUGUSTUS gene 3897912 3899062 0.31 - . g798 Scaffold_2 AUGUSTUS transcript 3897912 3899062 0.31 - . g798.t1 Scaffold_2 AUGUSTUS stop_codon 3897912 3897914 . - 0 transcript_id "g798.t1"; gene_id "g798"; Scaffold_2 AUGUSTUS CDS 3897912 3898604 1 - 0 transcript_id "g798.t1"; gene_id "g798"; Scaffold_2 AUGUSTUS CDS 3898658 3899062 0.31 - 0 transcript_id "g798.t1"; gene_id "g798"; Scaffold_2 AUGUSTUS start_codon 3899060 3899062 . - 0 transcript_id "g798.t1"; gene_id "g798"; # protein sequence = [MDTYTQMSEVRCFLSNVFFVFCIELTSSKVMLREVRKDLDVVGVFYGHPGVFVNPSLRALAIAKSEGFKARMLPGVSA # EDCLYADLCIDPSNPGCLTYEASDFLIRERPTNIYSHFILFQVGCVGIADFNFTGFENSKFGILVDRLEKEYGAEHPVVHYIAAMLPHEDPVTDQWTI # GQLREPEFYKRVGGVSTFYIPPKERKEINVDIIRELKFLPEGKVPDTRTQIYPPNQWEPEVPTVPAYGSNEHAAIAQLDTHTPPEQYQPLATSKAMTD # VMTKLALDPKALAEYKADHRAFAQSVPDLTANERTALEIGDSWAFRCAMKEMPISLLDNAKQSMEEASEQGFPWIIVVGVVGVVGSVVSSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g798 ### # start gene g799 Scaffold_2 AUGUSTUS gene 3910113 3911207 0.7 + . g799 Scaffold_2 AUGUSTUS transcript 3910113 3911207 0.7 + . g799.t1 Scaffold_2 AUGUSTUS start_codon 3910113 3910115 . + 0 transcript_id "g799.t1"; gene_id "g799"; Scaffold_2 AUGUSTUS CDS 3910113 3911207 0.7 + 0 transcript_id "g799.t1"; gene_id "g799"; Scaffold_2 AUGUSTUS stop_codon 3911205 3911207 . + 0 transcript_id "g799.t1"; gene_id "g799"; # protein sequence = [MAIPMERYATVAGDIRSSSVEAEQVAAAIEASIHDRRGWDGSSSDLATSSAGAGSSRPRDTNGLVAPGLASAMPHTPE # VVVSSQHYMEPPANYVPIPNYPLPIPPLTSRPRRSSRLEALPVVLDAAVSQAQQYASRSSPSRRHRIVPGAAENDRIYVPPGASQHWSQAGSQTTYVN # GYASTSVPPPASAPVEDSSRKHRRRHKSKSRTHRREEHLNGGREDIAGVTGLGLIDESFEERRAVDSQAAFASGYTEGLNSGFSARARTTPGPPVSAP # LPRSVRFNGATESAIPPATVSATTSNGDQQALRRGTTTTQPTTQSITPENLANRLRDLMEDPLRSSSQAQQFATNRASVARRPLGYSDDR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g799 ### # start gene g800 Scaffold_2 AUGUSTUS gene 3911242 3912099 0.84 + . g800 Scaffold_2 AUGUSTUS transcript 3911242 3912099 0.84 + . g800.t1 Scaffold_2 AUGUSTUS start_codon 3911242 3911244 . + 0 transcript_id "g800.t1"; gene_id "g800"; Scaffold_2 AUGUSTUS CDS 3911242 3912099 0.84 + 0 transcript_id "g800.t1"; gene_id "g800"; Scaffold_2 AUGUSTUS stop_codon 3912097 3912099 . + 0 transcript_id "g800.t1"; gene_id "g800"; # protein sequence = [MANLRGFPEHAHHSSRASLASSQEIPVGDPRAFLSVIPVNATNPNRPSADGSNEVAGFSAVVSSSARSGVQTNNHAIT # HHNSQTPTASHAAPRGNVSQVSQSAGTANTRPVNQRYTSLPVNTVSTTPRDNTHNYDHSRGHRPQPLRPIPIPNLNSNPLPTLPNFGYPSSALASAPH # RPAFPEYNSAPAIPMAPVTHVAPNGGSVSGPSRASRDSNSQTPHSPPPGDVNALGLDLNEVGDYDDGRGYEPEPIPAFAAPTPRASHNLFLRSFSFDH # DGNEVDGTLYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g800 ### # start gene g801 Scaffold_2 AUGUSTUS gene 3912805 3913416 0.86 - . g801 Scaffold_2 AUGUSTUS transcript 3912805 3913416 0.86 - . g801.t1 Scaffold_2 AUGUSTUS stop_codon 3912805 3912807 . - 0 transcript_id "g801.t1"; gene_id "g801"; Scaffold_2 AUGUSTUS CDS 3912805 3913416 0.86 - 0 transcript_id "g801.t1"; gene_id "g801"; Scaffold_2 AUGUSTUS start_codon 3913414 3913416 . - 0 transcript_id "g801.t1"; gene_id "g801"; # protein sequence = [MGIDIRMLDECGMLIPPLLHFIWQKLTFDGSDIISELISASNAASPPATVEQISRTSKRRQRENDPSDGEHPSSFALG # DHFSTMVDLPSITSITGSSYSSSMSYSSGIPASAREIPLGSEALVPEATLNVTPDLDFSEGLPLRTEDLGKLPVHFLPSSYANSEAQAPAYPMPVLSE # GFQYSGFDSQPNDPLGSTGIPFGIGSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g801 ### # start gene g802 Scaffold_2 AUGUSTUS gene 3920041 3921111 0.33 - . g802 Scaffold_2 AUGUSTUS transcript 3920041 3921111 0.33 - . g802.t1 Scaffold_2 AUGUSTUS stop_codon 3920041 3920043 . - 0 transcript_id "g802.t1"; gene_id "g802"; Scaffold_2 AUGUSTUS CDS 3920041 3920970 0.98 - 0 transcript_id "g802.t1"; gene_id "g802"; Scaffold_2 AUGUSTUS CDS 3921022 3921025 0.94 - 1 transcript_id "g802.t1"; gene_id "g802"; Scaffold_2 AUGUSTUS CDS 3921083 3921111 0.33 - 0 transcript_id "g802.t1"; gene_id "g802"; Scaffold_2 AUGUSTUS start_codon 3921109 3921111 . - 0 transcript_id "g802.t1"; gene_id "g802"; # protein sequence = [MQNKYIDLLEQLNQQKALNDGLRDELHRLTGSFYQEHPDYQRQTRTSLDSSRTSEERFERSELKGLDVPEQEFMISPL # PEFTSNALAADNFVSLPGDDDSEGDSPRSYDRLPVSQNTPEEVSSNPPTAPVTPSLLSLTAPRLDDAGQRASRSQSFSSRSVIPTRPASPVVRPIEDN # LPVVVPNPLERNSLLRNHLHDLLTDTPPNVSSSLPSTMDHHSSYDKVSNSSHRSSPRRSMPTRSPKILLAHCLLPQSPSLQSSRPLQLQLEGSIHSNS # NLSQRPALSRASSHAVAMENAQREKRKSERTLDVSEACENQATLSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g802 ### # start gene g803 Scaffold_2 AUGUSTUS gene 3926624 3927046 0.88 + . g803 Scaffold_2 AUGUSTUS transcript 3926624 3927046 0.88 + . g803.t1 Scaffold_2 AUGUSTUS start_codon 3926624 3926626 . + 0 transcript_id "g803.t1"; gene_id "g803"; Scaffold_2 AUGUSTUS CDS 3926624 3927046 0.88 + 0 transcript_id "g803.t1"; gene_id "g803"; Scaffold_2 AUGUSTUS stop_codon 3927044 3927046 . + 0 transcript_id "g803.t1"; gene_id "g803"; # protein sequence = [MSGLDITVERLSAQNTEATTTPGSTTDTSTPATSITGLDVEKLAKSEDKTDPFISIHLQLASPNQYPYRPNEALGDIP # GISYALELFLASHMVESEDYCNKSDVNKYVSCFIELTMTDLIVSSITEKDYILPLVMGSYNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g803 ### # start gene g804 Scaffold_2 AUGUSTUS gene 3929813 3930850 0.61 - . g804 Scaffold_2 AUGUSTUS transcript 3929813 3930850 0.61 - . g804.t1 Scaffold_2 AUGUSTUS stop_codon 3929813 3929815 . - 0 transcript_id "g804.t1"; gene_id "g804"; Scaffold_2 AUGUSTUS CDS 3929813 3930850 0.61 - 0 transcript_id "g804.t1"; gene_id "g804"; Scaffold_2 AUGUSTUS start_codon 3930848 3930850 . - 0 transcript_id "g804.t1"; gene_id "g804"; # protein sequence = [MQLHKIPIQLLPLTTMENSYLVQKTTHYGGRGLFAKISIPKDTLLVSTSPYASVVYRRYRKEVCAQCFSYAYEYNRNT # WKVKHEFDGGSSYFCSDACKEDWQSTQNVDNLVAKVNAALDRLEKTMKKRFAKESENVSPPSSTSTISMADIDSAWKRAEETSINAASKESLNELELD # TARFLASAIIRRHLEVIYPSSSNELTIGTWSQALQLQDNELVYTQGRPYAIASHLCIYRFLRSALWFNIPILRPYVESSDTIRALLARDQGNAFGLFE # VVGDSEMLGYAIFSAGSYFNHGMLSIGLYEFECRLAHFWPQTVLPIYAKNGKDDQCYSTPRETYNKTRNYV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g804 ### # start gene g805 Scaffold_2 AUGUSTUS gene 3946053 3946463 0.84 + . g805 Scaffold_2 AUGUSTUS transcript 3946053 3946463 0.84 + . g805.t1 Scaffold_2 AUGUSTUS start_codon 3946053 3946055 . + 0 transcript_id "g805.t1"; gene_id "g805"; Scaffold_2 AUGUSTUS CDS 3946053 3946463 0.84 + 0 transcript_id "g805.t1"; gene_id "g805"; Scaffold_2 AUGUSTUS stop_codon 3946461 3946463 . + 0 transcript_id "g805.t1"; gene_id "g805"; # protein sequence = [MLPITLASLSDIFVANTRISAFLLAEERPADYAIKLDTQSANAVECKGDFAWVIPSGNENKDTKAEQTEDVVLVANNN # KKETVQMIQEKNAQRNSKKAKKAKGEVDSLVLPTSNPIETGPDRPNPSETLPDQHLSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g805 ### # start gene g806 Scaffold_2 AUGUSTUS gene 3949235 3949621 0.65 + . g806 Scaffold_2 AUGUSTUS transcript 3949235 3949621 0.65 + . g806.t1 Scaffold_2 AUGUSTUS start_codon 3949235 3949237 . + 0 transcript_id "g806.t1"; gene_id "g806"; Scaffold_2 AUGUSTUS CDS 3949235 3949621 0.65 + 0 transcript_id "g806.t1"; gene_id "g806"; Scaffold_2 AUGUSTUS stop_codon 3949619 3949621 . + 0 transcript_id "g806.t1"; gene_id "g806"; # protein sequence = [MTSIATTHILFSIVEIQHGSITIDGKNITDVNLETLRTKLALVPQDSVLFLGTLRQNLCVEFITQISTFTPSSGSDPL # AVRTDAELITILQSACLLPKAMSDQTSEQKFDLNSNVDDEGKTNNVQSEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g806 ### # start gene g807 Scaffold_2 AUGUSTUS gene 3950705 3951467 0.49 - . g807 Scaffold_2 AUGUSTUS transcript 3950705 3951467 0.49 - . g807.t1 Scaffold_2 AUGUSTUS stop_codon 3950705 3950707 . - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_2 AUGUSTUS CDS 3950705 3951202 0.63 - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_2 AUGUSTUS CDS 3951264 3951467 0.52 - 0 transcript_id "g807.t1"; gene_id "g807"; Scaffold_2 AUGUSTUS start_codon 3951465 3951467 . - 0 transcript_id "g807.t1"; gene_id "g807"; # protein sequence = [MLSRTESRALAAIEKIKTELGSELKPEIEYINFNLLSLKSAKKAAEEYMQREQRLDILVNNAGIVSGLMATPYELGPD # GIEMQACNGTGHFALTVTLIPILKDTAAMPGSHVRIVNITSGGYMLANMTKPDFTSLEGLNQKTFGTWGRYGLSKLTVRASPPCCVVYIWLTSRDWIF # LQNILLTNELQKRFTAAGINNIYCLAVHPGAVNTELSRGTSNSYHISFIHHLSKIPH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g807 ### # start gene g808 Scaffold_2 AUGUSTUS gene 3954028 3954600 0.51 - . g808 Scaffold_2 AUGUSTUS transcript 3954028 3954600 0.51 - . g808.t1 Scaffold_2 AUGUSTUS stop_codon 3954028 3954030 . - 0 transcript_id "g808.t1"; gene_id "g808"; Scaffold_2 AUGUSTUS CDS 3954028 3954600 0.51 - 0 transcript_id "g808.t1"; gene_id "g808"; Scaffold_2 AUGUSTUS start_codon 3954598 3954600 . - 0 transcript_id "g808.t1"; gene_id "g808"; # protein sequence = [MLIRERRKQKGPTTIIQSTSRYYKSVQKADADMETWALNFGGRGYRFILLSPDGKWKTTQLTYKPSDGIMLGSLVLTN # ESKEALFKLLDTVELPDQPNLLLLDYLLARVKNFSLSKEVKLDLTMKGLWLQYMRDLLFQGGNGIGGRVTRKVEQNYLGILNEPRFELQQLRDSPEWE # EAETEMQQEYGKVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g808 ### # start gene g809 Scaffold_2 AUGUSTUS gene 3955966 3957036 1 + . g809 Scaffold_2 AUGUSTUS transcript 3955966 3957036 1 + . g809.t1 Scaffold_2 AUGUSTUS start_codon 3955966 3955968 . + 0 transcript_id "g809.t1"; gene_id "g809"; Scaffold_2 AUGUSTUS CDS 3955966 3957036 1 + 0 transcript_id "g809.t1"; gene_id "g809"; Scaffold_2 AUGUSTUS stop_codon 3957034 3957036 . + 0 transcript_id "g809.t1"; gene_id "g809"; # protein sequence = [MRIEHAHIETWQKDGNYVLIHDSAPGTLSGRILSLYADIPPLDTHSQIFGDSISPIAYKDCPLEHEELNDLDGLDNPA # REAISQLPVISIDEERHFVKETRSSGEVMNLLKTKGGPQLVELLGRTEDGKLVFPRHLDFAAGVFMEASISVYKRILLQLANAIIFLHSRGIIHRDIA # LRNILASKDRQNIVLCDLESQYGSHMCPEISFARFQQGLPDSGLPYSEKSDVFCFGTTMADFILVNHIQTPWQYFSGSFIPPPPFDEIVRACIRRDPV # DRPSMSEVKAMLESIDVPGTLLNLLVVYTQLMLLLHSDLAIEISGELVLLKTNSKFEKRVFNTIQNPFPRIPVPIKVSLTPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g809 ### # start gene g810 Scaffold_2 AUGUSTUS gene 3966706 3967593 0.79 + . g810 Scaffold_2 AUGUSTUS transcript 3966706 3967593 0.79 + . g810.t1 Scaffold_2 AUGUSTUS start_codon 3966706 3966708 . + 0 transcript_id "g810.t1"; gene_id "g810"; Scaffold_2 AUGUSTUS CDS 3966706 3967593 0.79 + 0 transcript_id "g810.t1"; gene_id "g810"; Scaffold_2 AUGUSTUS stop_codon 3967591 3967593 . + 0 transcript_id "g810.t1"; gene_id "g810"; # protein sequence = [MIPSRLCGLVFGLVSVTSATNVIHYPPKLTNLNNLTFVLNGTGAPGIFNSSITPDSEYGIYNWCNMPHVRTEEYLAPS # SNYTLKYIEVIQRHHKRTPYASNTFFKEDITWDCTGEGPVYYGKGTVGVTSDPTVVQWSAYTNPENPFTNSVGPGFVGSNCAFPQITTGGINDSYTHG # ADLRSVYAERLNLSTVLDPSTFKIRVTSNPITSQVSGGLLHGLFPDSSDVAVLIQADAFDSLSASYSCPAADSIFTAYTTGSSNWTEHLVDGAELYEE # LDAVSGTAENDTAGWHTSFDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g810 ### # start gene g811 Scaffold_2 AUGUSTUS gene 3987516 3988520 0.85 - . g811 Scaffold_2 AUGUSTUS transcript 3987516 3988520 0.85 - . g811.t1 Scaffold_2 AUGUSTUS stop_codon 3987516 3987518 . - 0 transcript_id "g811.t1"; gene_id "g811"; Scaffold_2 AUGUSTUS CDS 3987516 3988520 0.85 - 0 transcript_id "g811.t1"; gene_id "g811"; Scaffold_2 AUGUSTUS start_codon 3988518 3988520 . - 0 transcript_id "g811.t1"; gene_id "g811"; # protein sequence = [MTGTYTDDTLGGSSSIQEMKKAKMEIGSKYRIKETDSVQFALGMKLTHDRDQGIATLSMPAYWNNLLSHHGLQDMKPK # STPLPNGAVLSMGTSPPSTEDIEFMREKPYQEILGAVQFGAAACRPDIAHAANVLSRFAHNPRKVHWQHLMHLVRYISGTRDLGITYTKMAPGGLSPI # VYADADYASCVDTRRSTSGVLTMMAGGPTFWMSKRQDVVALLTTEAEYIGLAKAVQQAKWVHSFLSELGHEVPRPFLIRCDNQGAIAISENPKFHSRV # KHIDIRYHFLRDAVEKGDITIEYTPSEDNPADILTKPLGAAIHTRQVSLLGLRKLVPDRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g811 ### # start gene g812 Scaffold_2 AUGUSTUS gene 3990709 3991831 0.38 - . g812 Scaffold_2 AUGUSTUS transcript 3990709 3991831 0.38 - . g812.t1 Scaffold_2 AUGUSTUS stop_codon 3990709 3990711 . - 0 transcript_id "g812.t1"; gene_id "g812"; Scaffold_2 AUGUSTUS CDS 3990709 3991290 0.49 - 0 transcript_id "g812.t1"; gene_id "g812"; Scaffold_2 AUGUSTUS CDS 3991382 3991831 0.56 - 0 transcript_id "g812.t1"; gene_id "g812"; Scaffold_2 AUGUSTUS start_codon 3991829 3991831 . - 0 transcript_id "g812.t1"; gene_id "g812"; # protein sequence = [MASNGAVPPPIPEVSADLKFDGGVKVSWTPVKRRIVNSLKTQGLLGYTNGTITKPSPIIITISPPTRSPSLDAGTGTV # PPPSPEPTRATAIFSLNPSLEEWVFRNDRARGIIESHVDDLPSLMPDVDEKTAKEVLDTLEKEFARKDGMRKDAVEAGNAISDSQFREIAIAAFPTSA # FDNIIQNITANTSLYPTAASVIQQISFQYSHVENRPDAVVSGDHISQAHTATTPISPHAALLSRIEQLESMIAGKMARSGNGDKKCFNCGRVGHLKDE # CFRKGGGKEGQYPSWWRGKKDETVNQNPTSSMAIGEPTLHYAMTASDLPHPTGELYADSGATDLLSKSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g812 ### # command line: # augustus --species=saccharomyces split/input_1/input_1.fa_chunk_0000012