# This output was generated with AUGUSTUS (version 3.4.0). # AUGUSTUS is a gene prediction tool written by M. Stanke (mario.stanke@uni-greifswald.de), # O. Keller, S. König, L. Gerischer, L. Romoth and Katharina Hoff. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /opt/augustus-3.4.0/config/ ... # saccharomyces version. Using default transition matrix. # Looks like split/input_1/input_1.fa_chunk_0000004 is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 2065898, name = Scaffold_6) ----- # # Predicted genes for sequence number 1 on both strands # start gene g1 Scaffold_6 AUGUSTUS gene 1126 1812 0.38 - . g1 Scaffold_6 AUGUSTUS transcript 1126 1812 0.38 - . g1.t1 Scaffold_6 AUGUSTUS stop_codon 1126 1128 . - 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_6 AUGUSTUS CDS 1126 1812 0.38 - 0 transcript_id "g1.t1"; gene_id "g1"; Scaffold_6 AUGUSTUS start_codon 1810 1812 . - 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [MKDVALPLPVTEPSPRKLQRRLRIIPFLSSLLTTIRTNLSAGTPPSSSTSYDDHEDINPQLNLDLQDPDTVVTSEEED # GFISKVVVEQSWGSGTRSKPTSDSSDPASQDHKDSKSGETQPVHLMKTADEREVDVDGKLNLYLVCLLRFWLKIKHFFYPRPFDVGSEKRYDEDDWYS # KKTMAQLASIWLILNLALGCVSVPRPWTIIDLIFNAGVRITLYFAVLANFGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 Scaffold_6 AUGUSTUS gene 9696 10853 0.94 + . g2 Scaffold_6 AUGUSTUS transcript 9696 10853 0.94 + . g2.t1 Scaffold_6 AUGUSTUS start_codon 9696 9698 . + 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_6 AUGUSTUS CDS 9696 10853 0.94 + 0 transcript_id "g2.t1"; gene_id "g2"; Scaffold_6 AUGUSTUS stop_codon 10851 10853 . + 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MSTPVPPAPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVK # QNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQPRRQQISATAAPFTLFPNESVQIAASIPTPVAGPATPSPANQDFSTQIGQIRELLDRAN # AMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 Scaffold_6 AUGUSTUS gene 11805 14600 0.71 + . g3 Scaffold_6 AUGUSTUS transcript 11805 14600 0.71 + . g3.t1 Scaffold_6 AUGUSTUS start_codon 11805 11807 . + 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_6 AUGUSTUS CDS 11805 14600 0.71 + 0 transcript_id "g3.t1"; gene_id "g3"; Scaffold_6 AUGUSTUS stop_codon 14598 14600 . + 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARY # FTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVREVLTRLEKHDL # YLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQQEAFDTLREA # FISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWR # TAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNQQQTVLKPGHFTKIAASILRNPLEDRIRKASEREAQVLEGLETVKKH # GLQRLANGIAEWEEDNGLVYYRGRVYVPADNNLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEICARKKIQRHPRAVTQPL # DVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTS # GYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALH # LGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKVGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNPINGEIPTPPE # PVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAPNLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 Scaffold_6 AUGUSTUS gene 23248 24518 0.38 + . g4 Scaffold_6 AUGUSTUS transcript 23248 24518 0.38 + . g4.t1 Scaffold_6 AUGUSTUS start_codon 23248 23250 . + 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_6 AUGUSTUS CDS 23248 23782 0.48 + 0 transcript_id "g4.t1"; gene_id "g4"; Scaffold_6 AUGUSTUS CDS 23824 24518 0.45 + 2 transcript_id "g4.t1"; gene_id "g4"; Scaffold_6 AUGUSTUS stop_codon 24516 24518 . + 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MLAGHAGEEYDALTKGVDAGEDVAGEVHQNLKSAESRLGIALQGRFKDDEEQSTKKGKKPAASSKKRARKAESTTEAV # NERPPKKTKTSKVKSAQFVHDETPPRSMRLAAGPFAYGPPSSEAGPSRLPERPEPQEDEEDYEKQGQELRDRLGAQWQRILQESWRRREQDEQGELPQ # SGDPVPSPFSARNSTTSSYTGRTPRTRTPPMDAPKPFEEMEPEGMETPTAPPSPKLPPVKGTGMSSELSDLPTPTPSPPPVKSTLDAPAMGSDGKLKD # AMEMEFSYSETEDVPMVESEDEIRAEPSTSSRKGKERAAPQTLVSRMRSVDLQGPEDPYRPPHTGKSKQPAKSRRKRETTPVSNSALLGFLNSFLYSR # TWMMLLPWTPTFNVRRKWSGKGDGDEDAGVPVASSSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 Scaffold_6 AUGUSTUS gene 26776 27655 0.43 - . g5 Scaffold_6 AUGUSTUS transcript 26776 27655 0.43 - . g5.t1 Scaffold_6 AUGUSTUS stop_codon 26776 26778 . - 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_6 AUGUSTUS CDS 26776 27489 0.99 - 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_6 AUGUSTUS CDS 27548 27655 0.43 - 0 transcript_id "g5.t1"; gene_id "g5"; Scaffold_6 AUGUSTUS start_codon 27653 27655 . - 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MSWLSLALETKLSRKREREVSLEPVAGSSAKSNTVSDSMLHNSKEEKDYTRTPAKKNRIHRSVELDATAEEEDSQASG # HHRSRSNSSDDSNTNSPPLTQADLGIAASPPQEMKIKVRQISQGVEDLTWRNMKKQQKGSDADESDAQSQKIPKLPMTSVEEDKNMEEEALPSTSSSA # SASRRDSDANPTVEAALHLKRKYPERGPSAEPPSGLESNTLSSTPNMLGTGAEASSKRPRDDSDKDDNPRVPKRPTPPPEETEKHSSIKQVRFALYN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 Scaffold_6 AUGUSTUS gene 33098 34108 0.73 + . g6 Scaffold_6 AUGUSTUS transcript 33098 34108 0.73 + . g6.t1 Scaffold_6 AUGUSTUS start_codon 33098 33100 . + 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_6 AUGUSTUS CDS 33098 34108 0.73 + 0 transcript_id "g6.t1"; gene_id "g6"; Scaffold_6 AUGUSTUS stop_codon 34106 34108 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MTTDHSPIDAPFGSWATDKILSDMQPNRSVHRVGHGYVSVFEERHVFKVFHDEDPSEPLLIMPKVGHELRMMLIAGSD # SVHLIGRLFDNTKQKLIGFIMPYEQALAPGVNIGGEPGERAKFSKEQKREIIDKLCRLIERLQAKQIIHGDVKPSNLLLCSDGQVRLCDWALASVNGD # NFVAYAVSDHYASCRRCCLPQEPLALEEDLYATGVSIWEIWMEKVPFEDVEEDIVDELVMGGIRPDLQAVDDPEIAALIQSYLDAGPACSNKPGQTRI # VCTQVDVTFNNCRATPAHVETRVVKCYHCQDPDATQQCAEPFRLPNVLVESSSPVCPKCNPI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 Scaffold_6 AUGUSTUS gene 38822 39466 0.97 - . g7 Scaffold_6 AUGUSTUS transcript 38822 39466 0.97 - . g7.t1 Scaffold_6 AUGUSTUS stop_codon 38822 38824 . - 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_6 AUGUSTUS CDS 38822 39466 0.97 - 0 transcript_id "g7.t1"; gene_id "g7"; Scaffold_6 AUGUSTUS start_codon 39464 39466 . - 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MLNPGIYEILKARDSAAPSSHSADTSLPQFRTPEAAEVHIQESTVTYDLPSSSSWPDDLHPMTVLFPRGKVTFKVTFD # FGKRTVHPSSAQQSTRTIVKRFILDAMGSLIRNVEFNIEFENDWIGKNTEITFSVVGGQECPAEGSAPGRRSLRNRRSDSEGSNWLTESMNGTMGKRS # GSGCHGGMLDKGAGTWVLKNSMDRPIYGPVPQPKAGGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 Scaffold_6 AUGUSTUS gene 45705 48020 0.14 - . g8 Scaffold_6 AUGUSTUS transcript 45705 48020 0.14 - . g8.t1 Scaffold_6 AUGUSTUS stop_codon 45705 45707 . - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_6 AUGUSTUS CDS 45705 46715 0.79 - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_6 AUGUSTUS CDS 47305 47569 0.15 - 1 transcript_id "g8.t1"; gene_id "g8"; Scaffold_6 AUGUSTUS CDS 47974 48020 0.66 - 0 transcript_id "g8.t1"; gene_id "g8"; Scaffold_6 AUGUSTUS start_codon 48018 48020 . - 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MEGHQQLAVTIPLTFFVYGEFRFSPQPSLAAKDDSKRLSGFEMRDYMKKFADNYLEGVIRYGFHIIGVMRPNNNSSSG # WNVRVEDVRTKQQQTLTFDRIVLCTGAQYDLYIPLIFLSHTHKVYLIQFDAAGVTKDSPLRNTQDAFWGVRINDEGVPKPNGFHMLVKEGKIDIVAPA # RVASYSSDGESVILNNGGKLKADTVVLATGYTSSWHPLFDGTFLIVVTGVFVLFADMQAEQTAAGLGINRHPPGPSLVKPRTNGITMSVFPILLQHIL # AVNSGLPRSIVVLFQQRTSSTEILLSMEPWYVNSPRLPEIYPNISLQFTTNNGYAFEVTAHWISSYFLNDSNLKLPSSPEEALAHADRNSAWLRKRYP # DMLLWANESYSSNLAFWTWPQVIDEMLSDMGLKVYRSGGSWFTWPFKVIELKEIEKLKEERDKLRSKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 Scaffold_6 AUGUSTUS gene 63233 63529 0.71 - . g9 Scaffold_6 AUGUSTUS transcript 63233 63529 0.71 - . g9.t1 Scaffold_6 AUGUSTUS stop_codon 63233 63235 . - 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_6 AUGUSTUS CDS 63233 63529 0.71 - 0 transcript_id "g9.t1"; gene_id "g9"; Scaffold_6 AUGUSTUS start_codon 63527 63529 . - 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MSQQKALLLEKAKGAFVVSTVPILKPGPGQISIKVIAAALNPVDWKIQAWDFFMKKYPAILGTDIAGDVEEIGEGVEG # FSKGDKVYVLKPRLPRTFRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 Scaffold_6 AUGUSTUS gene 65793 66470 0.26 + . g10 Scaffold_6 AUGUSTUS transcript 65793 66470 0.26 + . g10.t1 Scaffold_6 AUGUSTUS start_codon 65793 65795 . + 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_6 AUGUSTUS CDS 65793 66470 0.26 + 0 transcript_id "g10.t1"; gene_id "g10"; Scaffold_6 AUGUSTUS stop_codon 66468 66470 . + 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MNFSVYRTSPSEGNSVSQKSGGSIADRKKALQNSGLSISTSNKRSSKDLHVNGTPISAAFSGANGVSPPSPNTSASST # ISSSSGSTAAALSTLTGLTAPSTVPGSSTSNPIHSSSSTSSSSSSTSTSNTAFSFTSTSASFGSSPASASTSSISASNSSIYSHAFVSPSTFGPPSPG # SSPSSSPTLPTRSFSTSSEYNAFNAQFPSIDELDEIRWAIRRFNTVQPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 Scaffold_6 AUGUSTUS gene 66544 67266 1 + . g11 Scaffold_6 AUGUSTUS transcript 66544 67266 1 + . g11.t1 Scaffold_6 AUGUSTUS start_codon 66544 66546 . + 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_6 AUGUSTUS CDS 66544 67266 1 + 0 transcript_id "g11.t1"; gene_id "g11"; Scaffold_6 AUGUSTUS stop_codon 67264 67266 . + 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MGSTSSLRSNRSIKDLKEINTNGTGEASPSSSPASGIPSTDTGGSIRGQAPLASPVPATPGTPHAALRNFMVPVVERP # SSTPSTPFRGSGSIWDSRPGSPTPTSTSKAPPVVPNKPSALSNSRSFYGNFDDPIPITGPTSPTSLDPSPSINGTSPLPSFTTPPSSSSLLTSPTVSN # SSTTIPQKNTCTPTELYNYLREHKIILLDVRERAEFEKGHIELGKESKGVAWVCIEPDVLRRTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g11 ### # start gene g12 Scaffold_6 AUGUSTUS gene 67302 69197 1 + . g12 Scaffold_6 AUGUSTUS transcript 67302 69197 1 + . g12.t1 Scaffold_6 AUGUSTUS start_codon 67302 67304 . + 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_6 AUGUSTUS CDS 67302 69197 1 + 0 transcript_id "g12.t1"; gene_id "g12"; Scaffold_6 AUGUSTUS stop_codon 69195 69197 . + 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MAPDESLSSSVTSYSIEDSLSLAPTSEASAFNNRHKFDLVVLYDRRSTSFSSTPPSKPSSSLVSTPSAFPVPGSHVTS # EASNPDMSTLLRAIWEREFRKTLRRMPMMLVGGYEAWVKEFGISESGMSSNGPAARTTTVVNGTPNGVATNGAHSSSVPPPPMPPSISPQGSQGRNPF # APGGPLASPAISTPSATFSLQHPGSNGSRSRASTSPSRPGAAGMGHKVNHSVDKSATSGSSHSRAPAESAHPNVSLSRSGRATPPFGPSTPLSPNLSG # NGMKRPPTTGRTSFSSSSSMVTGATPLGASGPMSTLPEGALAPTILNGATPITYPSISTYSLPSASLSSVTTRSPAPFDGMNGMNGIASPPLPPQASI # NPSVSRRRTSDYIDQSQEALALSGMNSPGYSTPGLGSPGYANGIGGTSGMNAYNGPSSSGLNGMNTYGGYNGYNANGAVNGISTIPRTTIDYPELSST # HPILRPPPAAAAGTLERQDSIKRFPTPPSSSTTGAGSTTLSYPVPSSLSSPSFKSSTSIAPSGISSTALKKLGLSPLHPVPRLKSAEWPPRYWADSPI # GTSGLKNMGNTCYMNAPIQCLSATVPFARFFTGECRCLSFSFSKTNWLISPWQRLISKLRLTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 Scaffold_6 AUGUSTUS gene 70936 71742 0.85 + . g13 Scaffold_6 AUGUSTUS transcript 70936 71742 0.85 + . g13.t1 Scaffold_6 AUGUSTUS start_codon 70936 70938 . + 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_6 AUGUSTUS CDS 70936 71742 0.85 + 0 transcript_id "g13.t1"; gene_id "g13"; Scaffold_6 AUGUSTUS stop_codon 71740 71742 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MYVEGVIFPPQMAEPVHHTTSDRDVQIVRYLFQTLLPLELVDDIIEDAEYWPCIHVERSEPILVDAKRSISRGLKMAW # CYLVSSPVPEALDSAGQGLGQSRVRRVDLKVQGHDQGWGKLSFPVTVILYMLRCSTPLPATHPGPWSWFEATIIKAFRESNLVWLPAALNGPVDPASV # LAGSNFDQTFEGFTRWHIAANAIATQVKQDHSVVWTEQEAQAPGNVIGLRGRESLGHELVRALQPGDRIAILALAEVRVRRSLADVAGAYMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 Scaffold_6 AUGUSTUS gene 75694 76044 0.8 + . g14 Scaffold_6 AUGUSTUS transcript 75694 76044 0.8 + . g14.t1 Scaffold_6 AUGUSTUS start_codon 75694 75696 . + 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_6 AUGUSTUS CDS 75694 76044 0.8 + 0 transcript_id "g14.t1"; gene_id "g14"; Scaffold_6 AUGUSTUS stop_codon 76042 76044 . + 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MKTGIVYLSSTTFPLEFSNCVLVTVQYLLLIININPESSQPMPSNMRTIALAAFLASATIMASALPTDGQMQQARAAV # VKMRQEPAPNSTETTTTASTTPTSTSDSASCGVSDIFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 Scaffold_6 AUGUSTUS gene 78993 80020 0.71 + . g15 Scaffold_6 AUGUSTUS transcript 78993 80020 0.71 + . g15.t1 Scaffold_6 AUGUSTUS start_codon 78993 78995 . + 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_6 AUGUSTUS CDS 78993 79525 0.71 + 0 transcript_id "g15.t1"; gene_id "g15"; Scaffold_6 AUGUSTUS CDS 79612 80020 0.93 + 1 transcript_id "g15.t1"; gene_id "g15"; Scaffold_6 AUGUSTUS stop_codon 80018 80020 . + 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MDSNGTKFISSASYSPDAFKLDMSTRTGELISFSLPSLANPDLVSLLCQGLPLQNLPRVTQRLSDILTSFKEGKEYVF # DWDSLQREQVLQAMQCLGQYLGQFEPALSYEGTDKRVVWRKSCWFASEGIAYPLLDTEHEISKFDGDLKDGLSGLVALQNSDVRASLEFLKRVLDSTL # VSKSWGIGLHPDGNLLSALITDGPGLGVYDFDGTYREPGVGGTILMGGSTLYRWSKGTYLPTFHDVSIGQEQKKTSIVAFFNLPDMEDIPQSAGPDTV # KNSFFHDIRVIKEDDKSPTGELAPLWRTIVQRHNLILPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 Scaffold_6 AUGUSTUS gene 81452 82356 0.76 - . g16 Scaffold_6 AUGUSTUS transcript 81452 82356 0.76 - . g16.t1 Scaffold_6 AUGUSTUS stop_codon 81452 81454 . - 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_6 AUGUSTUS CDS 81452 81932 0.81 - 1 transcript_id "g16.t1"; gene_id "g16"; Scaffold_6 AUGUSTUS CDS 82091 82356 0.79 - 0 transcript_id "g16.t1"; gene_id "g16"; Scaffold_6 AUGUSTUS start_codon 82354 82356 . - 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MQGSGSDTPLQETILYEFFSRYASTDLGCVLIFSGHNKSLIALAVLIARARPTAILSLITTQALYTKSIGELEKKLEK # VEFELQKAQVKALYSQCEQGLTCMSSGKIFTQLPRPVVAIIDVSLSPVPTLLTTSCIFNYLSFHSSFHSSIPSSFPSVQILFILEKPYVGYAYDTIRN # ISQDKVPIISWLSAPATFLFHHIGPKKLGGHAPEGWETVEGRKEVKSLLSRKADQGDSPDVQIEPHTKLVNC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 Scaffold_6 AUGUSTUS gene 84354 85924 0.27 + . g17 Scaffold_6 AUGUSTUS transcript 84354 85924 0.27 + . g17.t1 Scaffold_6 AUGUSTUS start_codon 84354 84356 . + 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_6 AUGUSTUS CDS 84354 84387 0.52 + 0 transcript_id "g17.t1"; gene_id "g17"; Scaffold_6 AUGUSTUS CDS 84509 84760 0.56 + 2 transcript_id "g17.t1"; gene_id "g17"; Scaffold_6 AUGUSTUS CDS 85080 85924 0.99 + 2 transcript_id "g17.t1"; gene_id "g17"; Scaffold_6 AUGUSTUS stop_codon 85922 85924 . + 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MKKNNNLSTALACRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNHDDLDDDSGGLPRGEPGDP # SGPGPGGPWVVLVPVPRPKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALK # WAYGRGLAERIKDEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPN # NNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCKSERPENRRAVLPRLKKPPKQPLRLLKRNRKTSPQLLFPGTK # RELR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g17 ### # start gene g18 Scaffold_6 AUGUSTUS gene 89642 91150 0.95 + . g18 Scaffold_6 AUGUSTUS transcript 89642 91150 0.95 + . g18.t1 Scaffold_6 AUGUSTUS start_codon 89642 89644 . + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_6 AUGUSTUS CDS 89642 91150 0.95 + 0 transcript_id "g18.t1"; gene_id "g18"; Scaffold_6 AUGUSTUS stop_codon 91148 91150 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MVIRFRPGKLGEKPDSITRRWDIYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASIIMDIEALHQAI # ILALPADPSSVVGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVLRYFHDHPLSGHFGQNRTLEAVLRQYTWPKVRDFVRDYVTSCTICGR # NKPRRHQPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTFDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFF # RALGKALSMELHYTSGYHPEADGQTERVNQTLEQYIRIYCSYQQDDWSPLLLIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFV # VNLDELHAFLREEILLAQSHYKEQADRKRISHPEFPIGSEVFVLAKHIRSTCPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEP # VTPNPFPNRTQSPPPPIEVDGEEEYVQRCRNP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 Scaffold_6 AUGUSTUS gene 95642 96298 0.91 - . g19 Scaffold_6 AUGUSTUS transcript 95642 96298 0.91 - . g19.t1 Scaffold_6 AUGUSTUS stop_codon 95642 95644 . - 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_6 AUGUSTUS CDS 95642 96298 0.91 - 0 transcript_id "g19.t1"; gene_id "g19"; Scaffold_6 AUGUSTUS start_codon 96296 96298 . - 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MFLSKQEELDQFLEENLQKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYWKLNEYTVKNHYPLPLVADIISQLQGARY # FTKFDVRWSYNNVRIKKGHEWKGAFATTRGLMNAIFADLIAAGKVAVYLDDILVFSNDLQEHQQVVWEVLTQLEKHDLYLHPEKCEFEQRQIEYLGLI # ISEREVRMDSVKVAAVRNWPVPTNLLELQGFLGFANFYRCFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 Scaffold_6 AUGUSTUS gene 101047 101496 0.87 - . g20 Scaffold_6 AUGUSTUS transcript 101047 101496 0.87 - . g20.t1 Scaffold_6 AUGUSTUS stop_codon 101047 101049 . - 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_6 AUGUSTUS CDS 101047 101496 0.87 - 0 transcript_id "g20.t1"; gene_id "g20"; Scaffold_6 AUGUSTUS start_codon 101494 101496 . - 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MEECSSAKSSMNKPQVFKGKDSTEVCHFLAQFQNWALEQPDLTKIQVKLIKLALGFFTEITGDWATPHLLHSSAENPP # FGGSWEEFLKEFRQCFESVDPGMEARNAIKYLKQGKAQTVAEFAQKFKDICQVHAAGLHSAARYSEDLLLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 Scaffold_6 AUGUSTUS gene 104391 104636 0.54 + . g21 Scaffold_6 AUGUSTUS transcript 104391 104636 0.54 + . g21.t1 Scaffold_6 AUGUSTUS start_codon 104391 104393 . + 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_6 AUGUSTUS CDS 104391 104636 0.54 + 0 transcript_id "g21.t1"; gene_id "g21"; Scaffold_6 AUGUSTUS stop_codon 104634 104636 . + 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MPAIDRPGQPPATTHAEKGKAFRDKLYQPPPDLPDEYPVNFTDTLSGDLPFQDITDTEVAEAIADTATHQPLDSHNNP # TTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 Scaffold_6 AUGUSTUS gene 113239 113745 0.63 - . g22 Scaffold_6 AUGUSTUS transcript 113239 113745 0.63 - . g22.t1 Scaffold_6 AUGUSTUS stop_codon 113239 113241 . - 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_6 AUGUSTUS CDS 113239 113745 0.63 - 0 transcript_id "g22.t1"; gene_id "g22"; Scaffold_6 AUGUSTUS start_codon 113743 113745 . - 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MDFLITNLGEEDIILGLPWLRKVNPEIDWEKGQLSVKPPRVDIEEVKDEQTSHPHLVASTIDRRTREFLIEGPQCEPT # HTEMGLEENEATTATGESPIHQIQANHKTRWAWVKAGILEEQTEEVWCSAGFTYSQQLAERPTATNPLEPLKRWSLTRDAKAMAVHLNCH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 Scaffold_6 AUGUSTUS gene 116398 116850 0.28 - . g23 Scaffold_6 AUGUSTUS transcript 116398 116850 0.28 - . g23.t1 Scaffold_6 AUGUSTUS stop_codon 116398 116400 . - 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_6 AUGUSTUS CDS 116398 116850 0.28 - 0 transcript_id "g23.t1"; gene_id "g23"; Scaffold_6 AUGUSTUS start_codon 116848 116850 . - 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MSTPVPPVPNTSAEDLMAQLIRQVASLATAMEERSSSKSSMNKPKVFKGKDGAEAWHFMAQFQNWASEQPDLTKSQVK # LIKSALDFFTESAGDWATPICYISVQKTPLSVTSLPRFCVKEKGRNLMGTPTNQSNTQYASSLLLNLFNSKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g23 ### # start gene g24 Scaffold_6 AUGUSTUS gene 118289 118612 0.84 + . g24 Scaffold_6 AUGUSTUS transcript 118289 118612 0.84 + . g24.t1 Scaffold_6 AUGUSTUS start_codon 118289 118291 . + 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_6 AUGUSTUS CDS 118289 118612 0.84 + 0 transcript_id "g24.t1"; gene_id "g24"; Scaffold_6 AUGUSTUS stop_codon 118610 118612 . + 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MWRRTADLQTILRACPRYEDYQDILKRVSDDVCLLDILGTKEGIEESGAFTKTGTQCSTPTEPNYAPLGIWEELEIIH # HNIAGEGIIPEADWQEENIDSNDAEPKAI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 Scaffold_6 AUGUSTUS gene 123624 124966 0.24 + . g25 Scaffold_6 AUGUSTUS transcript 123624 124966 0.24 + . g25.t1 Scaffold_6 AUGUSTUS start_codon 123624 123626 . + 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_6 AUGUSTUS CDS 123624 124081 0.3 + 0 transcript_id "g25.t1"; gene_id "g25"; Scaffold_6 AUGUSTUS CDS 124144 124966 0.4 + 1 transcript_id "g25.t1"; gene_id "g25"; Scaffold_6 AUGUSTUS stop_codon 124964 124966 . + 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MEVPQKGLSMQGPNDPVRLRTVAGGTFWFGSPVASSLSVRIPIKGVGQVLLPSIMPPTPRPTLVPRTSNAHPYRAENQ # CRCSDRLLESQLADSQRENSSLTSALRNTSRALESRQREVEQLRFSRREVLEREMEDCRVLDQFPALDEALGGSCISERFRKVQEDLQNATRERRVAV # EKLITSTRKNSQLRTTLLHQQGLVDESNALATRQRRLVEELQEEVHRVRGRAVFVEQMLKEYPDEGYYEVVLPPLSQLEGDLNKAHEDLRRVATFAHR # LYRCDPATVLHHHHRYLGAIIEAVVAFLRRGLDSDDLDVIVHNFRLALDYVQAARGVHGDMYMRSISSIQWFFNNAVDEDEGLYRMILEHSRFDSDSP # FLTAAHHAGFVPPPDDSVEPPLHRRMLALSTALPHSDGVGRWEDIVPASPVSTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 Scaffold_6 AUGUSTUS gene 132279 133739 0.61 - . g26 Scaffold_6 AUGUSTUS transcript 132279 133739 0.61 - . g26.t1 Scaffold_6 AUGUSTUS stop_codon 132279 132281 . - 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_6 AUGUSTUS CDS 132279 133739 0.61 - 0 transcript_id "g26.t1"; gene_id "g26"; Scaffold_6 AUGUSTUS start_codon 133737 133739 . - 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MDGVQHSSWIYGQDLTARLVPNPVHVPPRLSNPSVIPYQGSVSMQSHAVGAESQRDPNQQRTLVVHEEAVPPQGAPLG # TPFVTGAQTNRPGMVVDSAHSQESVAMIQQQARVIETLQEQLREVKKGFTAGKVPTGGPLSKTGNTAGLSGRAPRVMREYTRGGPSPVGPQPRSWQAT # EPISFNRNTPTGAKDGNPQVEQAGQIPDTLSVDQRRIHEWGARVQRAELGEYGRPEGGAYALENEGGGKGSFNPPPRVPPPHFSSQSRDRERPLSQGG # QGQREQGGRSGGGAPPPPPPPPPPSGGPGDSNSEGSDQGEQNQSSRNGGRREEDRGELPTGAPEVPPTRYDPDQPWYYDPRQGWHRKAAPRPPNEGRS # TWESNEEKNRITIESKLDVGKIESFAGDDRSAWKTWVLSLERMFGVRPTIYAREKDKCASAASHLTGAALSHFDTLNRQRLKGSTLASRTGRSLNESS # VPNLDPLTKRTRQGGD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g26 ### # start gene g27 Scaffold_6 AUGUSTUS gene 146155 146421 0.72 - . g27 Scaffold_6 AUGUSTUS transcript 146155 146421 0.72 - . g27.t1 Scaffold_6 AUGUSTUS stop_codon 146155 146157 . - 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_6 AUGUSTUS CDS 146155 146323 0.72 - 1 transcript_id "g27.t1"; gene_id "g27"; Scaffold_6 AUGUSTUS CDS 146414 146421 0.72 - 0 transcript_id "g27.t1"; gene_id "g27"; Scaffold_6 AUGUSTUS start_codon 146419 146421 . - 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MISVNKSVSAAKKSSQYSLGSDEVAMRDVFWKLSEAPWPPRNASSKLSGMFAKPLAAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g27 ### # start gene g28 Scaffold_6 AUGUSTUS gene 146577 148112 0.39 - . g28 Scaffold_6 AUGUSTUS transcript 146577 148112 0.39 - . g28.t1 Scaffold_6 AUGUSTUS stop_codon 146577 146579 . - 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_6 AUGUSTUS CDS 146577 147592 0.98 - 2 transcript_id "g28.t1"; gene_id "g28"; Scaffold_6 AUGUSTUS CDS 148058 148112 0.39 - 0 transcript_id "g28.t1"; gene_id "g28"; Scaffold_6 AUGUSTUS start_codon 148110 148112 . - 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MDYSTNIKELNLRLTSSICEVEGANDGVDDGADNGVDDSTEDGDSDGADDGANDGANDGADDGANDGANDGADDGADD # GANDGANDGTDNGADDGADNGADDGANHGADDGAEDGADGGANHGAEDGADDGVNHGADDGADDGVNHGADDGADDGVNHGADDGADDGVNHGADDGA # DDGVNHGADDGADDGVNHGTDDGAEDGAEDGANHGADDGADDGVNHGAEDGAEDGANHGADDGADDGANHGADDGADDGANHGADDGANHGADDGANH # GADDGADDGANHGADDGAADGADDGANNGADDGANDGADDGANDGADDGTNNGADDGANDGAVNGANDGADHGAEKLIAVEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 Scaffold_6 AUGUSTUS gene 152291 153743 0.61 - . g29 Scaffold_6 AUGUSTUS transcript 152291 153743 0.61 - . g29.t1 Scaffold_6 AUGUSTUS stop_codon 152291 152293 . - 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_6 AUGUSTUS CDS 152291 153174 0.92 - 2 transcript_id "g29.t1"; gene_id "g29"; Scaffold_6 AUGUSTUS CDS 153228 153359 0.91 - 2 transcript_id "g29.t1"; gene_id "g29"; Scaffold_6 AUGUSTUS CDS 153437 153743 0.67 - 0 transcript_id "g29.t1"; gene_id "g29"; Scaffold_6 AUGUSTUS start_codon 153741 153743 . - 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MAAIRTASLDRSPSTATITVNAERASSLLTFGSRSSSRAGESSISSLNNIHSRNPVFRPTHGHNRNCSSLLSSQPVGG # SQGSSSEENCTTSRPLSVEARRQLDIPDELEVILANQSPRTSVHSIEDHTSFRSLDSLDAPQDVSKIIDLDNMLDVDEDNTKKLFHFTGELEKLNESG # GSDRASSVEQLEKAFKTAAKIDLHYDFSGQGGLLQVDIPPLPVLPSMIAVDSSKSVELTNSSISSQEAHYCGSTQATSSSLEIFPISCLLDAKEPTLL # PGSDSISSTDSQDLPDTFTPKVLESSVSSASRPSDGELDKSFKFGGFTKSLSQEVELEKPISFSDIIPSPSRVRALSNASSFVDDSVINSIIAKEVRR # GFEFHDYRPSFYPPPVSNSTGSRRNNHSKQDSMMNFTYLLTVMSSMLVSRIHLIMVCQVCEKSPLQKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g29 ### # start gene g30 Scaffold_6 AUGUSTUS gene 157230 157646 0.95 - . g30 Scaffold_6 AUGUSTUS transcript 157230 157646 0.95 - . g30.t1 Scaffold_6 AUGUSTUS stop_codon 157230 157232 . - 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_6 AUGUSTUS CDS 157230 157646 0.95 - 0 transcript_id "g30.t1"; gene_id "g30"; Scaffold_6 AUGUSTUS start_codon 157644 157646 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MATSPSDSSNDNVLAWLDRLRTSVQDAGGKAGPVAFTDVCFSGNGGDMDDEDDEDDEGEDHDRSGGRRLTHAQRIRLV # PVHEGNDCEVGEGNGDQGGRGDDDALQSSLPDSHVPLGLIANLSLSSNKKKQVKETSNGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 Scaffold_6 AUGUSTUS gene 158121 158294 0.99 - . g31 Scaffold_6 AUGUSTUS transcript 158121 158294 0.99 - . g31.t1 Scaffold_6 AUGUSTUS stop_codon 158121 158123 . - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_6 AUGUSTUS CDS 158121 158294 0.99 - 0 transcript_id "g31.t1"; gene_id "g31"; Scaffold_6 AUGUSTUS start_codon 158292 158294 . - 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MKTPPKPSAPDKRPRPRQDNDDDSDDEDNEYLFEGGISVGVGGVTGTNGNRKSTGRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 Scaffold_6 AUGUSTUS gene 158365 159014 0.28 + . g32 Scaffold_6 AUGUSTUS transcript 158365 159014 0.28 + . g32.t1 Scaffold_6 AUGUSTUS start_codon 158365 158367 . + 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_6 AUGUSTUS CDS 158365 158502 0.28 + 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_6 AUGUSTUS CDS 158634 159014 0.47 + 0 transcript_id "g32.t1"; gene_id "g32"; Scaffold_6 AUGUSTUS stop_codon 159012 159014 . + 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MQTENEIWVSGASPLVNHELRQSGPSPWKMPINIAVKLCCSSNFIGTAHRIHTPSNHSDPRNPSGAFNPQHASKFPGS # HGRRTARVGTFWWKDLALDQLLPVDKEKETALKAAEARKMASGTRNQNPQTQQQPAALAPGDETIDEEDNEDEDNENDDDEADEAEDSEEDADG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 Scaffold_6 AUGUSTUS gene 165979 166600 0.9 - . g33 Scaffold_6 AUGUSTUS transcript 165979 166600 0.9 - . g33.t1 Scaffold_6 AUGUSTUS stop_codon 165979 165981 . - 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_6 AUGUSTUS CDS 165979 166218 0.99 - 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_6 AUGUSTUS CDS 166316 166440 0.99 - 2 transcript_id "g33.t1"; gene_id "g33"; Scaffold_6 AUGUSTUS CDS 166489 166600 0.91 - 0 transcript_id "g33.t1"; gene_id "g33"; Scaffold_6 AUGUSTUS start_codon 166598 166600 . - 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MFRNDSDANLNTHALEASAMEESCDDDDDDDDDDEVYSAVVAQSLTRLVSVEPDDDLVHSSSSESNNVPPQLDEPYTA # PERWTQPVPLEFIPVFFDDERVEAIFKIVSEVQRDGLDCPGFNVKGTNEEELAAEFILLMKASIRCGDWSKVLSPNRHFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 Scaffold_6 AUGUSTUS gene 166752 167687 0.34 - . g34 Scaffold_6 AUGUSTUS transcript 166752 167687 0.34 - . g34.t1 Scaffold_6 AUGUSTUS stop_codon 166752 166754 . - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_6 AUGUSTUS CDS 166752 167687 0.34 - 0 transcript_id "g34.t1"; gene_id "g34"; Scaffold_6 AUGUSTUS start_codon 167685 167687 . - 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MHHAVDSPPGQGSAPSLSTSSLGFNVEARPLPTALEIRGVEPLPPPPVCRPYTSMQVPDTTDGYGRIVGLQGHSRVTT # APGFSGLTTIQRTNHSRLDHASQSLPQAPRKRRGKAIRPPALGRRDQGPSIEDCVNIALGGIEVVSIDILVYPPMPPTPDINVWTSFFQISSTYITTL # QFYRLPRQPIIYDINKDSYRMVLEALGLFHQYSHLPTSTTVFDLFSDITIKLKQRYNLPSISSSIPLSAQELLPLHLMGFSNHGRANGAYNTSKLRPM # PYEMNTTIRNLLNGNGVYVVPKLVITRENHFCLHARE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 Scaffold_6 AUGUSTUS gene 171330 172390 0.53 - . g35 Scaffold_6 AUGUSTUS transcript 171330 172390 0.53 - . g35.t1 Scaffold_6 AUGUSTUS stop_codon 171330 171332 . - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_6 AUGUSTUS CDS 171330 171569 1 - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_6 AUGUSTUS CDS 171617 171627 0.89 - 2 transcript_id "g35.t1"; gene_id "g35"; Scaffold_6 AUGUSTUS CDS 171688 172390 0.55 - 0 transcript_id "g35.t1"; gene_id "g35"; Scaffold_6 AUGUSTUS start_codon 172388 172390 . - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MPPRESNHLASLQGGLAAPLPYPAHGSPVPPQESNRLTPLRGGLASSLPYSVHGSEGFERGNFDREGYRGGFTPSTIN # SGTGDNMGYGGHSERSYGGGKGDYFEGRGAYGGNRADTYGDYDESTRVGGNYQRDRDIRGGEGNTGYQDYHQDSDMRYSEYRQEQDRYSWNGFTYDGN # AGATWDRGMENGNMASMGSGKLEGHRRYQSSLIHGKIEGPPQYARVAPQELERIAQSQERKMQQEYDQDLLPTRKHAPKPPDSEALKVHARSQKTPSD # DEMEEAERAEFEHDPEANEDEEDDSPNYTEDLPITSRQRKIHF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g35 ### # start gene g36 Scaffold_6 AUGUSTUS gene 177066 178235 0.28 + . g36 Scaffold_6 AUGUSTUS transcript 177066 178235 0.28 + . g36.t1 Scaffold_6 AUGUSTUS start_codon 177066 177068 . + 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_6 AUGUSTUS CDS 177066 178235 0.28 + 0 transcript_id "g36.t1"; gene_id "g36"; Scaffold_6 AUGUSTUS stop_codon 178233 178235 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MMSDPLGQLRVCFTPLASAVVDTPEATLIACVGGSAKTSPFTLAMYKDYGDSFRHPPRLSSATLDTIDSIQARNIFPQ # DLPAYQRASVAVRTNGVVHPFWRDWALAEPCEFLTPEPLHHWHKMFWDHDAKWAIQAVGGVQIDFLFSIHQSAVGYRHFKEGISALKQVTGRTQRDIQ # RYLIPLISGAVSSKFVAALRSLTDFRYAGQAPRFSKTSSLRVQKALEEFHANKSEILNLKARVNPKGVLIDNWEIPKLEFLQSVEPSICASGPVMQWT # ADVTEHAHIYLVKDPARSGNNHDMEVFICRSLDRQARVRRFDLMTAMKDAQVDFRLGDVEGDEGGDGEHIQEGGNEEEITYISTTEELVTQLNPVSHK # LLGLSVLNRTFFSKPVC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 Scaffold_6 AUGUSTUS gene 191283 191543 0.78 - . g37 Scaffold_6 AUGUSTUS transcript 191283 191543 0.78 - . g37.t1 Scaffold_6 AUGUSTUS stop_codon 191283 191285 . - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_6 AUGUSTUS CDS 191283 191543 0.78 - 0 transcript_id "g37.t1"; gene_id "g37"; Scaffold_6 AUGUSTUS start_codon 191541 191543 . - 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MIAYSHVMAIDRHCKYVSRGGVNDSESVSSALNNVDDEERYFGSTVEPAHTVEGTTVRNWDNSSCYITCEQGKSGVVP # PISDLPDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 Scaffold_6 AUGUSTUS gene 192006 192488 0.41 - . g38 Scaffold_6 AUGUSTUS transcript 192006 192488 0.41 - . g38.t1 Scaffold_6 AUGUSTUS stop_codon 192006 192008 . - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_6 AUGUSTUS CDS 192006 192424 0.44 - 2 transcript_id "g38.t1"; gene_id "g38"; Scaffold_6 AUGUSTUS CDS 192467 192488 0.46 - 0 transcript_id "g38.t1"; gene_id "g38"; Scaffold_6 AUGUSTUS start_codon 192486 192488 . - 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MKLQDRRQLFDLINQKLLPCKWKANRITSQINYGTNTEVLKKRLTMCLIVDTRREDDLHNFVSGKDKGVFSDIEIFCA # VGTVEDFDEGRNVGGKVADVVDVPLSFSRSLYVVVSLSFNVEILKALTTTRLRVMLMSASGAGEATNG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # start gene g39 Scaffold_6 AUGUSTUS gene 193891 194763 0.87 + . g39 Scaffold_6 AUGUSTUS transcript 193891 194763 0.87 + . g39.t1 Scaffold_6 AUGUSTUS start_codon 193891 193893 . + 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_6 AUGUSTUS CDS 193891 194763 0.87 + 0 transcript_id "g39.t1"; gene_id "g39"; Scaffold_6 AUGUSTUS stop_codon 194761 194763 . + 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MSNNHVYADYSDYAAYVSYTDEIPEYSPNPTPTSALNSNASISNTPTPPYTSPPPPPPPPSASLISTLPEFSEGRTDD # ELETLYDKVWTGYGAGDLRNFENGAGIEGSGYGDGYGAGPSSPTSRNSSYLASPTSTTSYSSANSISMATNGSATPSSVPRPPSLPSSSIAYPPTPRS # SRPLPLPPGAHGPPSATIPPSLSSASVPAHSAAASIFRNSVASGSDGRSTPTLDSPLSARGRQLPTAPGASSATSPASSNISPAGYFESVPGVPLNSG # GLVPPPPPWVLETDWD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 Scaffold_6 AUGUSTUS gene 198563 199387 0.67 + . g40 Scaffold_6 AUGUSTUS transcript 198563 199387 0.67 + . g40.t1 Scaffold_6 AUGUSTUS start_codon 198563 198565 . + 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_6 AUGUSTUS CDS 198563 199387 0.67 + 0 transcript_id "g40.t1"; gene_id "g40"; Scaffold_6 AUGUSTUS stop_codon 199385 199387 . + 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MTKARAKDDITKYFVNRRPIPLDLLTLVNFTDPPTQRGAGLLRNLRGGERHNTTDTSPSLLTASSSTGASGLSSSTST # AGPGTSAPTPGDTSRTDSRSVYPCTIHHNGRMGGNYILYAESASARSEWKEKLEEAVGLRKVVQESNKVFEIETLSSDTFLVPSMGLGADRGERGAAG # GGLGPSYENAFTGKVTCSVPFNTPDGRGLVAIGCAEGVWIGFRHDSRCKSIGVLHPATTFLIDLTAMRRVLHLKMVTQCAMLEDFGIFLVLADKVCLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 Scaffold_6 AUGUSTUS gene 204790 205204 0.78 - . g41 Scaffold_6 AUGUSTUS transcript 204790 205204 0.78 - . g41.t1 Scaffold_6 AUGUSTUS stop_codon 204790 204792 . - 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_6 AUGUSTUS CDS 204790 205066 0.93 - 1 transcript_id "g41.t1"; gene_id "g41"; Scaffold_6 AUGUSTUS CDS 205158 205204 0.78 - 0 transcript_id "g41.t1"; gene_id "g41"; Scaffold_6 AUGUSTUS start_codon 205202 205204 . - 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MALKSTEEERAFLRARANAWRPSDGYAFYEAANDPNEWDPELEVYHTGPRSGISSRDSSARVSVEALVPTTNTNEPLH # LHPPSESHQDSESNRNSYISDPEMSFMPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 Scaffold_6 AUGUSTUS gene 205658 206821 1 - . g42 Scaffold_6 AUGUSTUS transcript 205658 206821 1 - . g42.t1 Scaffold_6 AUGUSTUS stop_codon 205658 205660 . - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_6 AUGUSTUS CDS 205658 206821 1 - 0 transcript_id "g42.t1"; gene_id "g42"; Scaffold_6 AUGUSTUS start_codon 206819 206821 . - 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MAWSTIKYGVALKSKYLPVFWDRKAQTVTDLNSELGLVDEKLVNAAHDKKGKHLAIGWPEDTNKTRRTVLIATLEYEI # IDWKLKVKIGGLGVMSSLMGKAMTDVDLIWVVPKVKDLEYPAGDPDDPIEVVIFNETYLVDVEVHVFDHITYVIIDSPVFRAQTKADPYPSRMDDLSS # AIFYSTWNQAIAATIRRYPHIDIYHINDYHGALAPIYLLPKVFPVCLSLHNAEFQGLWPLRTKEEMREVCSAFNISKKHCVKYVQFGNTFNLLHAAAE # FVSLHQKSVGVAGVSDKYGKRSWARYPALWTLKHVDSLPNPDPTDIAALDEKPIKSKGVKVDRIAEKARPESKRQAQEWAGIEQNPNSNLFVFVGRWS # KQKGVDLIADVMPGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 Scaffold_6 AUGUSTUS gene 207665 208666 0.83 - . g43 Scaffold_6 AUGUSTUS transcript 207665 208666 0.83 - . g43.t1 Scaffold_6 AUGUSTUS stop_codon 207665 207667 . - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_6 AUGUSTUS CDS 207665 208666 0.83 - 0 transcript_id "g43.t1"; gene_id "g43"; Scaffold_6 AUGUSTUS start_codon 208664 208666 . - 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MPLSRSLLGCSDPSVSLDHFDPTAPTRHLFTQFNFLRSTYTALQDGFTLTQLGNWTYEIQRPGSGGVSTEMGLWSISR # EGMQNVQVLNGTHNGTVWMFMTNENVTKSYDFNCSTNLDWIKAPYPVEPGNSTGAVVRNLIYPFENYTLQASLSPYFNDGNAPYFGCLESITMDPYGF # KVLVVDSDWVGAPPVLTLFTPGHDARLLSASSSSNGLDNVDISLGFNLDMDCDSVTNSITLNMSTSGHGSAPLIGNVSCLSVSPFNSTGLSGVPQTAW # VWNATLTNFPDGLLTITVANPTSAVGVETGVSSLRSQPTSKKFHSQFLFAYIGNRPSHP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g43 ### # start gene g44 Scaffold_6 AUGUSTUS gene 210091 210723 0.73 - . g44 Scaffold_6 AUGUSTUS transcript 210091 210723 0.73 - . g44.t1 Scaffold_6 AUGUSTUS stop_codon 210091 210093 . - 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_6 AUGUSTUS CDS 210091 210723 0.73 - 0 transcript_id "g44.t1"; gene_id "g44"; Scaffold_6 AUGUSTUS start_codon 210721 210723 . - 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MALVIGLLVLSSLFSLPNVVHASPYNEQLIQYNLNLNKTATSPLDYYTNRTNTTYTPSPSNWRSLPIYTVLLDKFANG # EPSNDDFFKTPYESDWRETQLRFGGDLKGMGDDRMLDYLQGMGVRVIYVAGTIFLNEIWEADGRLGSCCRDWNDSFYLTGYSPLDFSVLDPHWGTWDE # WVQTIDKIHARGMYFMADFTVGTMSDLIGFKGCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 Scaffold_6 AUGUSTUS gene 212010 212456 0.87 - . g45 Scaffold_6 AUGUSTUS transcript 212010 212456 0.87 - . g45.t1 Scaffold_6 AUGUSTUS stop_codon 212010 212012 . - 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_6 AUGUSTUS CDS 212010 212456 0.87 - 0 transcript_id "g45.t1"; gene_id "g45"; Scaffold_6 AUGUSTUS start_codon 212454 212456 . - 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MVYRFPLPFAKTLVPFDEHGKESLAAKAVVDMIMQQVAGELHLPMPPKGTGTGSAQLPEIVIDNARSSSLKGYTPSKT # FEFEITNEDGTGSCRGGCTCFVRPALKKPGVYEVGITDIWADKYVIGRSLTMDPEALQALNTTFPFRWPE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 Scaffold_6 AUGUSTUS gene 214189 215006 0.29 - . g46 Scaffold_6 AUGUSTUS transcript 214189 215006 0.29 - . g46.t1 Scaffold_6 AUGUSTUS stop_codon 214189 214191 . - 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_6 AUGUSTUS CDS 214189 214700 0.77 - 2 transcript_id "g46.t1"; gene_id "g46"; Scaffold_6 AUGUSTUS CDS 214763 215006 0.33 - 0 transcript_id "g46.t1"; gene_id "g46"; Scaffold_6 AUGUSTUS start_codon 215004 215006 . - 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MVRVLLLGGHGKVALHMTKLLAAHNHKISSVIRNPDHAIEISDQYPENPSLIEPVVASIEETDEEGAKELMKGVEWVI # WSAGAGGKGGPERTKAVDEIAAKRFIKAALLAPSVTKFLMVSASSSRRSPASYWTDSDRVAFKKTWDSIGVYSEAKTVADEYLYDESRKSSKTIWVDI # CLRPGSLSDSHGTGKVDLGKAKLVGSVPREDVAAVAVELLEKETGGGLWVDLIGGSEPISSAVERVVSQRITSRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 Scaffold_6 AUGUSTUS gene 224378 224722 0.53 - . g47 Scaffold_6 AUGUSTUS transcript 224378 224722 0.53 - . g47.t1 Scaffold_6 AUGUSTUS stop_codon 224378 224380 . - 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_6 AUGUSTUS CDS 224378 224722 0.53 - 0 transcript_id "g47.t1"; gene_id "g47"; Scaffold_6 AUGUSTUS start_codon 224720 224722 . - 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MMSIIRANFIVFPISPRNSPQAVAHLISKVSVDHILTGHESSMQDLVREALEIVKTSAMNHVPQVSLAPFFEDLFLEN # PVTNADDLPFKRRNPHDILFYIHSSGVYIFDIFMLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 Scaffold_6 AUGUSTUS gene 233902 234483 0.33 + . g48 Scaffold_6 AUGUSTUS transcript 233902 234483 0.33 + . g48.t1 Scaffold_6 AUGUSTUS start_codon 233902 233904 . + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_6 AUGUSTUS CDS 233902 234483 0.33 + 0 transcript_id "g48.t1"; gene_id "g48"; Scaffold_6 AUGUSTUS stop_codon 234481 234483 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MLPPSKDSVGARILKKMGWRVGQGIGPRISLKQRRLQDLQASTGSAFSVNTSEIIPDEDAEEASKHTYAPRDTPVLVV # ERKDNSHGLGYRPGMSLNDSLGVKGSGGSSTGPNISCKCLFNMQFDRQGLMRVFCSKAGFGLGALNDADEDDLDVYDGSSANVRNRLAYDASDDPERD # RTFLAGSKSKLVGNSHF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 Scaffold_6 AUGUSTUS gene 234967 236441 0.95 + . g49 Scaffold_6 AUGUSTUS transcript 234967 236441 0.95 + . g49.t1 Scaffold_6 AUGUSTUS start_codon 234967 234969 . + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_6 AUGUSTUS CDS 234967 235971 0.96 + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_6 AUGUSTUS CDS 236076 236441 0.96 + 0 transcript_id "g49.t1"; gene_id "g49"; Scaffold_6 AUGUSTUS stop_codon 236439 236441 . + 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MSQKDRDRLKNIAANLHSTTGPPATASASDQISPPAPAPTATTPRIPRTDPQIARAALTGFKPFPSDPVKQARYTAYL # QSQADTSSTIMLEPLPHQSIPEFNSEMEEYAQSAIVFKPVSGAMAGRFTSAAVVEHGPKVIEGLHTPAFEEQSSSNEEKKAAEEKELSPKENAARMGM # YGHLTRETVPWQPARLLCKRFGVKDPNPEPKTEDPTQSSVPDFQDPSAFDPSVPSGTAAADYGIVSINNNNTGASTSGPRDLANVGLGDEDDTQGRDT # LTYERPSVDVFKAIFASDDEDSSDEEGGDEGDKGPDIETSGPSSETIMSTKISPLSSIPVVERKEEEEKRKAIVSFMDDEAGDTLNVVVEKPKKKRKK # DKEKDREKDKETGGLKLKGEKEVEKEVKSKRRNAVDENEDDMWVEKPAPPAVTVASDVEMADTSTALSVGSEVPRGRKRAIDFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 Scaffold_6 AUGUSTUS gene 241259 242356 0.98 - . g50 Scaffold_6 AUGUSTUS transcript 241259 242356 0.98 - . g50.t1 Scaffold_6 AUGUSTUS stop_codon 241259 241261 . - 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_6 AUGUSTUS CDS 241259 242356 0.98 - 0 transcript_id "g50.t1"; gene_id "g50"; Scaffold_6 AUGUSTUS start_codon 242354 242356 . - 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MSLRLPFTPTFPSFGAKTKKSSAEWLRRQSRDPYVKQRALGAVIASTKTSSILGNLGSNNDGISSSISSPLAFRSRSA # FKLIEIHEKYDQFLLKPDVRVVVDLGAAPGGWSQVVSQVVHGKDPTQVDAREDVDEVVEYPVDQDEEGTEEDSDTKDTWHRKRKSKIKAKNRPKPLPP # KPLEFYDPLNFDAEIEHLSSSSLDLQSKVKIIAVDRLSMDPITGVQTLKADFLHPRTEGMIRSLIGGPSITPYKLTLSTPDTPKVDVVLSDIAPNTVG # VPAVDSEANFQVAQAVFQFAYKYLRTADEIGRTRGGVLVMKHFAHPKMDVFRKEVLEEYFKDVIYTKPRASRQESKEGYFLCRGFWPREYR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g50 ### # start gene g51 Scaffold_6 AUGUSTUS gene 243317 243670 0.9 + . g51 Scaffold_6 AUGUSTUS transcript 243317 243670 0.9 + . g51.t1 Scaffold_6 AUGUSTUS start_codon 243317 243319 . + 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_6 AUGUSTUS CDS 243317 243670 0.9 + 0 transcript_id "g51.t1"; gene_id "g51"; Scaffold_6 AUGUSTUS stop_codon 243668 243670 . + 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MLMQERQEHLLRTRIEKDYGVTVELSTELSSFEEHEDHVIAHIVKHVPNAGENTEETVKVDFLVGADGGRSTVRKQLG # LPFMGDDSESLKEIGMVAGDIEALEGTLDQKVGPSVNSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 Scaffold_6 AUGUSTUS gene 244403 245038 0.61 + . g52 Scaffold_6 AUGUSTUS transcript 244403 245038 0.61 + . g52.t1 Scaffold_6 AUGUSTUS start_codon 244403 244405 . + 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_6 AUGUSTUS CDS 244403 245038 0.61 + 0 transcript_id "g52.t1"; gene_id "g52"; Scaffold_6 AUGUSTUS stop_codon 245036 245038 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MLSKTTELFHKTFQPASPEKMAEGWRRGYELRMFGVNYRKSGITLDEKYSYGADEAVDPYRSGDDGTVRAGDRAPDAP # KLSPVGQTNATTYTTFLDLYNPAYHTILIFADPGRNREAIETILETIQGLPSSKEIIKTIVVLPQTSSSANDASTSSADMVLLDTEGYAYKHYDVAGD # SQQPTVFIVRPDGFIGGLVFGVEGIKKYFGLILKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g52 ### # start gene g53 Scaffold_6 AUGUSTUS gene 247276 247680 0.6 - . g53 Scaffold_6 AUGUSTUS transcript 247276 247680 0.6 - . g53.t1 Scaffold_6 AUGUSTUS stop_codon 247276 247278 . - 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_6 AUGUSTUS CDS 247276 247556 0.87 - 2 transcript_id "g53.t1"; gene_id "g53"; Scaffold_6 AUGUSTUS CDS 247656 247680 0.61 - 0 transcript_id "g53.t1"; gene_id "g53"; Scaffold_6 AUGUSTUS start_codon 247678 247680 . - 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MLPLLIVNKPLKEVLTGRAFAGNGKEPSQEDLNRRAFAGNGKEPSPEDLNRRAFAGNGEEPSPEDLNRRAFAGNGKEP # SQEDLNRRAFAGNGEEPTQEDLN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 Scaffold_6 AUGUSTUS gene 248166 248810 0.87 + . g54 Scaffold_6 AUGUSTUS transcript 248166 248810 0.87 + . g54.t1 Scaffold_6 AUGUSTUS start_codon 248166 248168 . + 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_6 AUGUSTUS CDS 248166 248810 0.87 + 0 transcript_id "g54.t1"; gene_id "g54"; Scaffold_6 AUGUSTUS stop_codon 248808 248810 . + 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MAAPPYRNLLALVSVSLLFSIVLNVYNLKKLHNPIAGELGLKYLLIFESFPTTLVGPSPVPPVASELPMTVNPAVLNF # MLAQHYEITNASEWATLVPHKGSRVRLPSKSSPGDEFEVALFYDLHCLDVIRAVFVSMRDGSSAHSTEAEECLGTIRQAILCAADITLEPTEIVCYDG # ESCNNFGPEASGDNVEHSCRDWVQVREFVESNQEGWDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g54 ### # start gene g55 Scaffold_6 AUGUSTUS gene 249427 249738 0.54 - . g55 Scaffold_6 AUGUSTUS transcript 249427 249738 0.54 - . g55.t1 Scaffold_6 AUGUSTUS stop_codon 249427 249429 . - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_6 AUGUSTUS CDS 249427 249738 0.54 - 0 transcript_id "g55.t1"; gene_id "g55"; Scaffold_6 AUGUSTUS start_codon 249736 249738 . - 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MTEQVLPSGGAVLMRNGAPIITTLTGVIDRIPFDSPNKIEERISGQPIVKIDTNIAMLWTPYDFLINDKVDHIGTDIW # SFAKLDGKWVVSSVADNALAPETVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 Scaffold_6 AUGUSTUS gene 255223 256664 0.75 + . g56 Scaffold_6 AUGUSTUS transcript 255223 256664 0.75 + . g56.t1 Scaffold_6 AUGUSTUS start_codon 255223 255225 . + 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_6 AUGUSTUS CDS 255223 255769 0.93 + 0 transcript_id "g56.t1"; gene_id "g56"; Scaffold_6 AUGUSTUS CDS 255823 256664 0.8 + 2 transcript_id "g56.t1"; gene_id "g56"; Scaffold_6 AUGUSTUS stop_codon 256662 256664 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MDVKTNVFCASGMHLPNGSYATFGGNGAITVGGNIGSNTTDGGSAASYDMTYQDYDGRKAIRILNPCTNDDDFTSEEC # QWFDNPDVLSMQKERWYSAAEPLGDGTIVLIGGFVNGGYINRNYPNTDPTYEGGAAEPTYEFYPANGTTATIMQFMVKTSGLNSYAHTYLMPSGKMLV # QANYSTMLWDPATNTETDLPDMPGEVVRVYPASGGVAMLPLTPANNYTPTVLFCGGSNMTDEMWGNYSWPVIDTFYYPASNDCQRLTPEPADGSTPAY # EQDDDMLEGRTMGQFIILPTGELLMVNGGENGTAGYSENTDTTLEYGQMPYGMSLAAAPVGKPALYNPNAPAGSRWSNDGFATSTIPRLYHSSAILLP # DASVMIAGSNPNVDVNLTTYFPRPTRPKFSILPISRLVIVQFLPASRPLFHMVVLTSTYLFPHLPTQVPRTMLQPILLLWLFVLDGPRTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 Scaffold_6 AUGUSTUS gene 256684 257016 0.86 - . g57 Scaffold_6 AUGUSTUS transcript 256684 257016 0.86 - . g57.t1 Scaffold_6 AUGUSTUS stop_codon 256684 256686 . - 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_6 AUGUSTUS CDS 256684 257016 0.86 - 0 transcript_id "g57.t1"; gene_id "g57"; Scaffold_6 AUGUSTUS start_codon 257014 257016 . - 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MTRAPTTPPTIAPVCDELALLSVELEELEPDPVPDVSVDASWLGEQCSRGSGLCFDVSSANYDEGAVGRDAVNDDEYH # CGSRLEDICVRWHLRGMHDYGTITVTVYVVLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 Scaffold_6 AUGUSTUS gene 260004 261266 0.32 - . g58 Scaffold_6 AUGUSTUS transcript 260004 261266 0.32 - . g58.t1 Scaffold_6 AUGUSTUS stop_codon 260004 260006 . - 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_6 AUGUSTUS CDS 260004 260568 1 - 1 transcript_id "g58.t1"; gene_id "g58"; Scaffold_6 AUGUSTUS CDS 260803 261266 0.48 - 0 transcript_id "g58.t1"; gene_id "g58"; Scaffold_6 AUGUSTUS start_codon 261264 261266 . - 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MRTNPAFKDFVQRCTRHPDAHRLDMKNFINRPIPRLLRYELLLKGILEETPVGPIAASNRQGGSSTSSRGANAEHEDH # SSIPQVLDVIRRLGKDTEPGVVNAKSKVELWKYNEGLVFKQGEWIDMDLLAESRSLIHSGKLLRQTDGLEWSGWTEFLTEPPVQRGTGPGLLRGLRSQ # GTIGQGLEASSPNELLASPEGSTPIETSSSEMSPSPSSRLLYPITLHHLGRQSVSPTTSSLIPPLPAGPSSSRTAQQAKPPPNVILYTESATARAEWG # AKLQEALGIRRVVQESNKVFEIETLSSETFVTPAGLDAPGVGSAGVLGIGYSPDTVTGKVTCSVPFSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g58 ### # start gene g59 Scaffold_6 AUGUSTUS gene 261724 263258 0.39 - . g59 Scaffold_6 AUGUSTUS transcript 261724 263258 0.39 - . g59.t1 Scaffold_6 AUGUSTUS stop_codon 261724 261726 . - 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_6 AUGUSTUS CDS 261724 262079 0.65 - 2 transcript_id "g59.t1"; gene_id "g59"; Scaffold_6 AUGUSTUS CDS 262184 263258 0.39 - 0 transcript_id "g59.t1"; gene_id "g59"; Scaffold_6 AUGUSTUS start_codon 263256 263258 . - 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MPPRMTSGHSTVLPLPTAVVTMLTRCYVPTCVDDKPCYAWDCPKRGLSIQRMLSSSSSNIVPVVVNIPIISSYPYLEE # ERKPWKETVPEEVFSRIPEGEVKRQVAIHDLITKETDYLADLIVLETQFMLPLSEWVVSISGSQNSENGLVATTTSSHSPPPTPSGSTAAFVSPLPMR # NSSSSFSSSSSKSSPLLAFSPALQTLFPLLQALITAQTRLLDNLRVRARESQYGIIEGIGDLYLERAASSEWRAGWGGGWVQGRGFVSTADRAKEGWT # GGRGYDEWVGVWATCGLGGLGIFSPAISTTTDEYGNEDWKKIIVEQEMQRQQKQRESNLTAAEDESTGEVGTETGGIKEPREPRESSRSADPVSSPSS # LIDTAANSTSPAALKTNKKKAGKEKEENSDASYLREAIRAMRALWGYGKVKTFQLSMNVGASGGDDNKGSMGVMGEAAIKWEWFNLVSEEERKEIGKT # EVKRQA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 Scaffold_6 AUGUSTUS gene 263582 265128 0.21 - . g60 Scaffold_6 AUGUSTUS transcript 263582 265128 0.21 - . g60.t1 Scaffold_6 AUGUSTUS stop_codon 263582 263584 . - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_6 AUGUSTUS CDS 263582 264316 0.78 - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_6 AUGUSTUS CDS 264453 264898 0.35 - 2 transcript_id "g60.t1"; gene_id "g60"; Scaffold_6 AUGUSTUS CDS 264990 265128 0.42 - 0 transcript_id "g60.t1"; gene_id "g60"; Scaffold_6 AUGUSTUS start_codon 265126 265128 . - 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MENKRPLSPEVPDEDLQQLYDQVWAGFGSEDTQSIESASSYPFNCLYNLPDVVYNYGSPSTTGGSNIYQHQQDTDNYS # GYISSPISPVSTAAATYARSARSASIRSNGRERSGSGSARRLPLPPTPANGWNAPTQMTTAKEYQRQGHVSSMSTSSISSVASSRKLPATPTSAPVVT # LAGRICTVWVSDFPLVLGRQTCNLEGTAQIPYQTNRSMQVVSGSSANTSPALVAAPLPPSQSPRSYFDEKSRKDPGLSMNRWNSTTSSIVNGVNAQGL # RIPPPPPLLSFQRPSQLTQPQYSMPEPDLYADPNAGPSNIVRRPTDMLRELKDGAKYDRYHPEERHDQLGVDADEASYDWDEDYELQQQRFAADAPRS # YQSYSSSQSQPQGSSSRRNRKPKNRRDWTYEYSEGNDNEYSSDEFINYSLLSHLAVQLRIKSREAFM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 Scaffold_6 AUGUSTUS gene 270557 271753 0.92 - . g61 Scaffold_6 AUGUSTUS transcript 270557 271753 0.92 - . g61.t1 Scaffold_6 AUGUSTUS stop_codon 270557 270559 . - 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_6 AUGUSTUS CDS 270557 271429 1 - 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_6 AUGUSTUS CDS 271493 271753 0.92 - 0 transcript_id "g61.t1"; gene_id "g61"; Scaffold_6 AUGUSTUS start_codon 271751 271753 . - 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MTLGISIPSPMTRGSPSSDDSSQVHTPVSPIFAEPSQRHSTAAEPSSRLANGGNKRKSTRRVNTAERRATHNAVERAR # RETLNGRFLDLAALLPNLSQIRRPSKSAIVNSSIAHIHASRRHRLLASRELRTLKLESDALRRELNDWRDRAGIPRIQEPHRGDAFSTILSGEIEILP # IPDADEEEGEYMYGDEEGAGEGAVYATGGSPEFAAPPPPQMNTNVSQRTSSNGYDLSIEQQQMMRRAAAPMVASPSGMVVENPVMGMIYNNNMGSGPY # PAVSFAPDLDQNKWRPSVNEQGIMASVSRRSSIATSDVRRNRDRAMSTSTTGSSGGGSPAHMAYYDPGWNATMGGMAPNMGANMGAMITNGNMGNGGA # YSTVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 Scaffold_6 AUGUSTUS gene 288745 289187 0.45 + . g62 Scaffold_6 AUGUSTUS transcript 288745 289187 0.45 + . g62.t1 Scaffold_6 AUGUSTUS start_codon 288745 288747 . + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_6 AUGUSTUS CDS 288745 288749 0.45 + 0 transcript_id "g62.t1"; gene_id "g62"; Scaffold_6 AUGUSTUS CDS 288860 289187 0.97 + 1 transcript_id "g62.t1"; gene_id "g62"; Scaffold_6 AUGUSTUS stop_codon 289185 289187 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MFREKAINQGYWTGDPGDDVRTASHPFYGQEDGDLPPLDELANDPTQPNYTPYNSKDEEKADGIFVNDDDEIQDVKDF # LVAEGFDYDREDGNWGIDVYCEAVMKIQQLLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # start gene g63 Scaffold_6 AUGUSTUS gene 290541 290948 0.56 + . g63 Scaffold_6 AUGUSTUS transcript 290541 290948 0.56 + . g63.t1 Scaffold_6 AUGUSTUS start_codon 290541 290543 . + 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_6 AUGUSTUS CDS 290541 290948 0.56 + 0 transcript_id "g63.t1"; gene_id "g63"; Scaffold_6 AUGUSTUS stop_codon 290946 290948 . + 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MKEVSILFTALKNSPVTTQRITKDKATKYPAQKVVEAMFESAWKELGLEQSGKLPVMHFFTYQYLRNWNPREVLKYEI # TRDAAKHGKGTCNDNCYATATPVEGKHAHFDFEIELDVEREDGKLQVFSKKGVKVDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 Scaffold_6 AUGUSTUS gene 293063 293764 0.57 - . g64 Scaffold_6 AUGUSTUS transcript 293063 293764 0.57 - . g64.t1 Scaffold_6 AUGUSTUS stop_codon 293063 293065 . - 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_6 AUGUSTUS CDS 293063 293764 0.57 - 0 transcript_id "g64.t1"; gene_id "g64"; Scaffold_6 AUGUSTUS start_codon 293762 293764 . - 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MRIDRKWNTTELLDFIATKLPNAMRYIQLTPRVVHTVYNRLLDDKKYAFFSPVVLCLKDGRTWKAYPGKAGNWPDGEL # VRLKCVSKRNYGWEDNWIVLCTSVRCYIHSISLLGHLGARCGREELMAAGEQFMVGLNPSPPPPTISDEDDETSGRQDKGKGRARASSKDVKRDARRL # RENRPLFLSESSESSDGDNPAADAGYSSDDYPGTTEAITASLGQQNRPTTRGEYSFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g64 ### # start gene g65 Scaffold_6 AUGUSTUS gene 294081 294575 0.6 - . g65 Scaffold_6 AUGUSTUS transcript 294081 294575 0.6 - . g65.t1 Scaffold_6 AUGUSTUS stop_codon 294081 294083 . - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_6 AUGUSTUS CDS 294081 294575 0.6 - 0 transcript_id "g65.t1"; gene_id "g65"; Scaffold_6 AUGUSTUS start_codon 294573 294575 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MTSHKRKHMRVQSSSPSPTDTNAESAKDSESDDDNMSDSHSPVGSTLRHAAHVYHSASRGSSTYKANKADTMKAKVMG # KMRAKSDLFRAAQAESNGGYKKRRIELSPVKASSSKARTSTQRPSYSKSGSASRTLSTSKSKIVSSSTGKVFSSIYLTDIQADNYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 Scaffold_6 AUGUSTUS gene 294754 295326 0.98 - . g66 Scaffold_6 AUGUSTUS transcript 294754 295326 0.98 - . g66.t1 Scaffold_6 AUGUSTUS stop_codon 294754 294756 . - 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_6 AUGUSTUS CDS 294754 295326 0.98 - 0 transcript_id "g66.t1"; gene_id "g66"; Scaffold_6 AUGUSTUS start_codon 295324 295326 . - 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MRLLGRIEHGEYHDDCEGLDPAIIDKYYGIDNEGSEIEDDLQDSAESDSGSDSGADLEGIVQQWLFPQITLRIYSMST # TERITEDIRSQFHHAPVRVPKHENPFASEIQLNTFNECLVSCLEENIIPSGFGVLGEEWGDEGYPSFEILKSGRRGTRELRIPLPVDEWLPRAELWVQ # ALVLMDSLLEIDTD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 Scaffold_6 AUGUSTUS gene 297368 298021 0.31 + . g67 Scaffold_6 AUGUSTUS transcript 297368 298021 0.31 + . g67.t1 Scaffold_6 AUGUSTUS start_codon 297368 297370 . + 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_6 AUGUSTUS CDS 297368 298021 0.31 + 0 transcript_id "g67.t1"; gene_id "g67"; Scaffold_6 AUGUSTUS stop_codon 298019 298021 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MPSLARWVLRKIEDHDPPMSTVRKLTLSQELPLLKLDWLRPSVGALIMIERETFDGLYAELIGLHSQILLKIHFAREA # LEHERKVLAYTQLPTDILPATGCSTKHHREVCYPVWNGVWWNQIARKIFHPEQSRRIEEISKIPAILRSIPWEGITGTCAELFICTLEIAGAFTVEAE # IVTAAASAVREYLITLHPSEAEFCFDDEQAADDAMATVTAT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g67 ### # start gene g68 Scaffold_6 AUGUSTUS gene 305805 307269 0.23 - . g68 Scaffold_6 AUGUSTUS transcript 305805 307269 0.23 - . g68.t1 Scaffold_6 AUGUSTUS stop_codon 305805 305807 . - 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_6 AUGUSTUS CDS 305805 306310 0.89 - 2 transcript_id "g68.t1"; gene_id "g68"; Scaffold_6 AUGUSTUS CDS 306395 306583 0.36 - 2 transcript_id "g68.t1"; gene_id "g68"; Scaffold_6 AUGUSTUS CDS 306635 306656 0.5 - 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_6 AUGUSTUS CDS 307009 307269 0.4 - 0 transcript_id "g68.t1"; gene_id "g68"; Scaffold_6 AUGUSTUS start_codon 307267 307269 . - 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MSFILSSGAADMAMAWQTLSASQRSTIKQQYQAAGIKLLVSAFGSTETPTTSGKDPQQLASTMAAWVKQYGVDGIGKF # EGIFTKGNAYNTQFYNQGASEYTTCDGLLTASSSNNPKSSVFEIEANGFELNKIVIGKPGSTGTGDATNGQMSTGMLAGYAGVMSWEYPDANSQWITT # VRGSAYPIDGFSDSGSSGSSTSTADAASPTSVGSSGGSSTDAASPTSLGSSGSSTDGASPTSSPSSVANSDSASPTSLGSSSSSTPTPDGASPTSTDT # DSGSTAASTDAGSIPTTDSSSPTSPATSASTAASTGTFNNGMWTPSASTHI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 Scaffold_6 AUGUSTUS gene 308818 311256 0.85 - . g69 Scaffold_6 AUGUSTUS transcript 308818 311256 0.85 - . g69.t1 Scaffold_6 AUGUSTUS stop_codon 308818 308820 . - 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_6 AUGUSTUS CDS 308818 311256 0.85 - 0 transcript_id "g69.t1"; gene_id "g69"; Scaffold_6 AUGUSTUS start_codon 311254 311256 . - 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MIINDSAFLSSRFAGKNIVIASKKAGNPCPMFPDIVSPPPPLKSSKSHTRSKSKSSHVDVTMPMKTYDGSDDDTITSH # TTRTGSVASTSTAKTPKAPRTAKKGAKTPRSRSVSRTRNIPVEVDDEDEVEDLPPPAAKTTRKAPTTTTRSRSISRTRSVASIVDSDGGTGTEDEVFL # KRSTSTRSKGKAKETGASSRSTDDEGGVSSKKKGNKGRSQSKTRVSVIPEDMSDNGAVEPPPPPPKSTKKSVARKPSTRAGAASKSTSSAKQNHQHEE # DQDSDVLEPAPSSKGSKPISNSVAAAAALFDDNVEIDTTEQIHDPQPVRPTRTTRKSTKPPVGLGTSTTTKKSTLTRSTSAASVRGAKSRAKEEVDDD # DDPLDDIHMHVPPISPPSVELGLKAEGESQRESVPQLSAAKPTNSQRKLNTKKKLPPVNLKTDFSDQDAVPPPPPVPPRSPSRPKTKPLPTHTPEIDD # GGEVVPERHTEEKEPVERSGMSSRSRSGTRESSSTDTYSKEPMSKPTTLLKSATMKKKGSFLNSRSSTQSRTGVSIDQVMNISSDEGDEDEVENVIRM # VEPVQTKSRILTHVKPPPQGKTKGKDTPALTSTTDPTSDDSLIPAWGSVQAKIAQIEKTVETESGTSGRISPLKPKLANSFIDEPKPDVSTVTTLEVE # DRDVQMDELPDLAKNEINEEVKEDVREVSPLPRPAVTPPRPQQQQVPTSPFKTPFRFGMGPGNPFNVPPTPGAPMESIPAGIPIPLSREPFVPTQELS # ETELSMTVEEWVRYHMQIEYDKFKEDGEREIDAFLRTAEQVRKTIEAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 Scaffold_6 AUGUSTUS gene 314056 315039 0.48 + . g70 Scaffold_6 AUGUSTUS transcript 314056 315039 0.48 + . g70.t1 Scaffold_6 AUGUSTUS start_codon 314056 314058 . + 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_6 AUGUSTUS CDS 314056 315039 0.48 + 0 transcript_id "g70.t1"; gene_id "g70"; Scaffold_6 AUGUSTUS stop_codon 315037 315039 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MFIVRTIVRADDFWGTIMAGARRSSISLLTRRTTINGKHNSKNTEKPTTRTKVEKVEEDGKTTDYDSEDYENGNFDQP # TTVTERSSPTRALDWLCLSLGLITNLVQVVDEAKLILRETSPYFIWNERLLRAHVSIKFLVLDPDCIQKTIPCIRVCSCRRPTSVLKLLVSTYEHQLP # FISVHSTRPVVKIPEIPLTLETEQQEQQAEADASFLLGHLSVLFGLLMMDSSENQEIVLDSLPLLHLGHEDIKPNSNSKHKLKQQKLGQLVENASELG # VFYAVISRRGLSGNGIAADTPDPGQSHEENDAARGADVAKGVISFLRYLLDSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g70 ### # start gene g71 Scaffold_6 AUGUSTUS gene 317127 318251 0.98 + . g71 Scaffold_6 AUGUSTUS transcript 317127 318251 0.98 + . g71.t1 Scaffold_6 AUGUSTUS start_codon 317127 317129 . + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_6 AUGUSTUS CDS 317127 318251 0.98 + 0 transcript_id "g71.t1"; gene_id "g71"; Scaffold_6 AUGUSTUS stop_codon 318249 318251 . + 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MQEVADFHSVEILAFDPSASSADLAFIPLITLNTAAKSILFFSGTTVIFRDPNDELKILDIIRPFYEIKLEDRQPFVP # PNQVFFPVSLRIFYHHIDEYQPDSFEAVLNDEYAIILRPKTLALYSLRAFRRGSHPPSASLSPSQVHEFQWRIDSCVMQRQISPSAPYLSNDSKPSSL # NILIRYSSLFPWPVNLLHHYILYPMIRTSRQRPNKHSSTTAGFAITSNNLPYKFPPVLSQTIVSPVRLFAITDMALGPYGTAVWFDSHTDYDGEVGQR # LAGLMLEFSKHRDETGSNNITAADQVSTTPSMVFGAHETDDWNRLAIDEGEGRIAVGSTTGKSSLKTMLKDSDRSFPLAVMIRNGYVSVKGMNFIGRE # RK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g71 ### # start gene g72 Scaffold_6 AUGUSTUS gene 335916 336272 0.86 + . g72 Scaffold_6 AUGUSTUS transcript 335916 336272 0.86 + . g72.t1 Scaffold_6 AUGUSTUS start_codon 335916 335918 . + 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_6 AUGUSTUS CDS 335916 336272 0.86 + 0 transcript_id "g72.t1"; gene_id "g72"; Scaffold_6 AUGUSTUS stop_codon 336270 336272 . + 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MSAQTALLIGASGQTGQHLLKELLNSPKFSQVFEYGRRVTDLETISHGKEKLQQKVIDFEKLNESGLKDGQWDVVFIT # YVSSLNLNCARSLTSYTILRLGTTRKNAGSAEAFEKIDRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g72 ### # start gene g73 Scaffold_6 AUGUSTUS gene 337621 338777 0.41 - . g73 Scaffold_6 AUGUSTUS transcript 337621 338777 0.41 - . g73.t1 Scaffold_6 AUGUSTUS stop_codon 337621 337623 . - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_6 AUGUSTUS CDS 337621 338442 0.97 - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_6 AUGUSTUS CDS 338565 338777 0.41 - 0 transcript_id "g73.t1"; gene_id "g73"; Scaffold_6 AUGUSTUS start_codon 338775 338777 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MLLQALVSWTNSTEKDGGIDLVSKLATQISDTTAECDKLTQELVSVVDQINQVTKLIENHWASALAIALRKLQAELND # AWSEAEKLAEEMDGLTRELDDIDDTGVYSDEGEIFIRTAAVVTVPKPASHDAVSASGKLIDLKPSNVASTSSQFLRPPSAVEPKEGEESKSSPEDNDT # RSLRSRRSARSGKSSSRVGMITAARTRSMRTSLGSLRLPGRSSRSIHSPSGIQSAPVDGPHPPVPSIPKVFTPDTSHPPSSNSLTPTSNAPHSSTPSP # LDRKQSRNISTESLVDEPAPELPPPLRFLYYLQLLSRGSERRRLKTSGSSPIAVSANLRLNPHFPSWTTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 Scaffold_6 AUGUSTUS gene 347438 347797 0.81 + . g74 Scaffold_6 AUGUSTUS transcript 347438 347797 0.81 + . g74.t1 Scaffold_6 AUGUSTUS start_codon 347438 347440 . + 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_6 AUGUSTUS CDS 347438 347797 0.81 + 0 transcript_id "g74.t1"; gene_id "g74"; Scaffold_6 AUGUSTUS stop_codon 347795 347797 . + 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MDAAQTPGYGACKFVLVFLGVTASHRAMCVDQENFVTVVRGVEAAVGVKTQGLDSPQTTANASQAILDFASAQSNIRF # NSDVKTAMGNAASILEQIASDDNTQFNLKGSGHGQTPLVTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g74 ### # start gene g75 Scaffold_6 AUGUSTUS gene 353018 353381 0.64 + . g75 Scaffold_6 AUGUSTUS transcript 353018 353381 0.64 + . g75.t1 Scaffold_6 AUGUSTUS start_codon 353018 353020 . + 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_6 AUGUSTUS CDS 353018 353045 0.64 + 0 transcript_id "g75.t1"; gene_id "g75"; Scaffold_6 AUGUSTUS CDS 353149 353381 0.69 + 2 transcript_id "g75.t1"; gene_id "g75"; Scaffold_6 AUGUSTUS stop_codon 353379 353381 . + 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MSRIFSSCSVTVSLINLYATSGRNASSFHSRTHPSGYDDTVVGGIELRTPLSASAANKWYARVPSRSGEPVREQQHIL # GEDDDEEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 Scaffold_6 AUGUSTUS gene 353858 354475 0.65 - . g76 Scaffold_6 AUGUSTUS transcript 353858 354475 0.65 - . g76.t1 Scaffold_6 AUGUSTUS stop_codon 353858 353860 . - 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_6 AUGUSTUS CDS 353858 354475 0.65 - 0 transcript_id "g76.t1"; gene_id "g76"; Scaffold_6 AUGUSTUS start_codon 354473 354475 . - 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MVICVASSSHTGSDRHTPFYTHSIKHSRSHSKSSWSNSRRTSPAAGSPERDPSPEQPRFDEHFPYHGYPQVADPFYPA # DSSNYWINAMQLAQIHQSHGPTQYIPISQSRLDEVDASYYSYGDYPPTVMSSVRHQRPLRVPMHEPVPPYDAASYTLPNASTNSAHGSQIYAYDHRGC # REDISGVGIFPTRLEHLLEGDHSVNWGYA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g76 ### # start gene g77 Scaffold_6 AUGUSTUS gene 359904 360827 0.57 + . g77 Scaffold_6 AUGUSTUS transcript 359904 360827 0.57 + . g77.t1 Scaffold_6 AUGUSTUS start_codon 359904 359906 . + 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_6 AUGUSTUS CDS 359904 359924 0.57 + 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_6 AUGUSTUS CDS 360220 360391 0.57 + 0 transcript_id "g77.t1"; gene_id "g77"; Scaffold_6 AUGUSTUS CDS 360466 360827 0.7 + 2 transcript_id "g77.t1"; gene_id "g77"; Scaffold_6 AUGUSTUS stop_codon 360825 360827 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MSVNVLIPRTLELYKLLGIFPDIIDRSSPPPTNLRSFAMPDDGKPPNLTPIAQSLVNTPDRPLVSQNRQEQLLREHIF # ADYGIQVELGTELKSFEQQPDHVVVHVVNIVDSKIVEESFTVDWLVGADGARGVVRKQLGLTFLGESPEMDAVTGDIYVLGDPLDHVRMGIFIRLTGV # TLNMLLNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 Scaffold_6 AUGUSTUS gene 367319 368657 0.32 + . g78 Scaffold_6 AUGUSTUS transcript 367319 368657 0.32 + . g78.t1 Scaffold_6 AUGUSTUS start_codon 367319 367321 . + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_6 AUGUSTUS CDS 367319 367889 0.32 + 0 transcript_id "g78.t1"; gene_id "g78"; Scaffold_6 AUGUSTUS CDS 367942 368657 0.51 + 2 transcript_id "g78.t1"; gene_id "g78"; Scaffold_6 AUGUSTUS stop_codon 368655 368657 . + 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [METDPAEFCIVAQDTVIHTGMFSSISYNRQISDSVLSEGDPVKREDEESNLNDVGYDDIGGCRKQMAQIRELVELPLR # HPQLFKSIGIKPPRGILMFGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKVSFTVTMN # VELLVNFFVSDQRRTRSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILRIHTKNMKLADDVDLEQVCRSPSVNQFSLISKTYQIAAD # THGYVGSDVASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGTSNPSALRETVVEVPTTTWDDIGGLEKVKQELQETVQYPVDHP # EKFLKYGMSPSKGVLFYGPPGTGKTLLAKAIAHECNANFISIKVTDIYYVLFIDHT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 Scaffold_6 AUGUSTUS gene 368690 369276 0.26 + . g79 Scaffold_6 AUGUSTUS transcript 368690 369276 0.26 + . g79.t1 Scaffold_6 AUGUSTUS start_codon 368690 368692 . + 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_6 AUGUSTUS CDS 368690 368953 0.3 + 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_6 AUGUSTUS CDS 368992 369276 0.46 + 0 transcript_id "g79.t1"; gene_id "g79"; Scaffold_6 AUGUSTUS stop_codon 369274 369276 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGGSSGDAGGAGDRVLNQILTEMDGMNAKKTSSSSVPQTGQI # KLILPSSDLVPSRVSILKATLKNSPLAPDVDLNFLAKSTHGFSGADLTEICQRSAKLAIRESIDADIRRTREKQEKEGDDAKMEEDVEDEDDPVPEIT # RYALSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g79 ### # start gene g80 Scaffold_6 AUGUSTUS gene 373836 375722 0.85 - . g80 Scaffold_6 AUGUSTUS transcript 373836 375722 0.85 - . g80.t1 Scaffold_6 AUGUSTUS stop_codon 373836 373838 . - 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_6 AUGUSTUS CDS 373836 375722 0.85 - 0 transcript_id "g80.t1"; gene_id "g80"; Scaffold_6 AUGUSTUS start_codon 375720 375722 . - 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MSDSVPALDRHFEAVVPPPSASLSDPIHCTVVQIDLREINRLLADIKGVKNVAVRSRQDGTPEAFVSVGPQENLDSTV # IKSSLANFLPGYAIPDIHVLARPLPLIAGDFDFASMEADIIQQNTASMSASAAVVRDIVAELLDIEPGMVSGESDFFLLGGNSLLLGKLSYLIRKRTN # ASIAVAAIFTNSSINGIASLVEVEQRKLSLESLVDERMQPYPSTRNNSELTLGSNGNRSPNSEGQKERGQNHPLNLIVQAIPMALFYPLKTAVTWSIL # LFILSYLAPAINQDYFQRMLALICAIVIARLCVRVCAPVAAIVCKWVVIGKYKPGNHRMWSLYYLRWWLVNQSLVSAGRGIFAMHPELNKLYYRLLGA # HIGKDVSISKHAHLGEFDLLTLEDGCRIDSSLVRGFCVEREGYFRLAPITIGRRAVVNSYTQISPGAIIPEGSVYGPHASSHESPSPPSYAAYNRTLF # MEPNWPLKFFVAWPIIIAVTFVSYIPWFIILWLMVSKTAIVEPGTNNALVSVVYWFSNPERVLWHAVSRMVRAICTPLLQVVFGIMVKRTLGLNSEHQ # ASDATQLVLLRRYINSILLSQGKLKEAFSLIGTHYEGVSVSSLFFSSDIQLTLSASSYTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 Scaffold_6 AUGUSTUS gene 375815 376444 0.52 - . g81 Scaffold_6 AUGUSTUS transcript 375815 376444 0.52 - . g81.t1 Scaffold_6 AUGUSTUS stop_codon 375815 375817 . - 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_6 AUGUSTUS CDS 375815 376444 0.52 - 0 transcript_id "g81.t1"; gene_id "g81"; Scaffold_6 AUGUSTUS start_codon 376442 376444 . - 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MPIASPPTTYQLERPGCSGIACGPYLSIRDPSNIEHELPRGKTGAVSVRGLPTFAGYEVSPDINVPLDTSAFSSEGWF # DSGDMGYMDEDGYLFITGRSKEIINKGGEVISPFEVEEAIITAARDHVKVTPFAHISTGSILTESAQTTLAFAIDHSVLQEAIGVVIVPVPGRPVIGL # AQLLDLLKEHLHPSKWPFAIVYMQDLPKNRQVE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g81 ### # start gene g82 Scaffold_6 AUGUSTUS gene 382205 384207 0.75 + . g82 Scaffold_6 AUGUSTUS transcript 382205 384207 0.75 + . g82.t1 Scaffold_6 AUGUSTUS start_codon 382205 382207 . + 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_6 AUGUSTUS CDS 382205 382471 0.75 + 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_6 AUGUSTUS CDS 382537 384207 0.99 + 0 transcript_id "g82.t1"; gene_id "g82"; Scaffold_6 AUGUSTUS stop_codon 384205 384207 . + 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MIAFNARFTLLAALLSLIAVSLNPLVEAAAISARRPDTSSSASGTHHKTTREPVLPLPTRSEKALSSKKSEKGEKKKK # EGSSKGHKHDGRALDEFIQVSPWDHTHNVISVNIEHRDELRVLPGHHDHDDGHRNDLVDIDIKKRGEQAHFHTRRHSEFHDGKVIIGGKNDHVHIHAR # RHHDHDHDKVVVKGDNDHVHIHGRDHDHDHDHNHDHDHDHNHDHDHDHDHRRARRFRPHPRSLETMQKRACQATPGYIDINVSIIYCVLCFPSLTFRI # LSLSQSDGKRLASMAYNQTMQEYDVSESEASTFNLMNCGTSEASSLVTLACNDIPQGGCLTYMYNGTSEDMTCQRCVDQSSVPPTACQTFMYNITSGQ # VNPTNCNMVATQADDADTEPNTGDGPDAGDEIPDGEGEEPNAEQAASINARDASSTNSSSVTPVSLVFRPLAKELEVEDTGSNNTSFNSTNTSGNSTS # FNATSIDSDPDSTSPNNTSTTSANQTFTTTITVTSTSTSTGSSSSAVQSAAVASPSTTGMKVEVFNDPNETNAPPFSSSTDSPLSSTMTSSSANTTPT # SSMMDADAVASSIAASSSTDMMAASFTTSSSSTGTSSVSASTSSSSSNSPSATAAAAGLNARSTEPYLWQFKRFDQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 Scaffold_6 AUGUSTUS gene 385821 386330 0.34 - . g83 Scaffold_6 AUGUSTUS transcript 385821 386330 0.34 - . g83.t1 Scaffold_6 AUGUSTUS stop_codon 385821 385823 . - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_6 AUGUSTUS CDS 385821 386330 0.34 - 0 transcript_id "g83.t1"; gene_id "g83"; Scaffold_6 AUGUSTUS start_codon 386328 386330 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MVQNRENNYISSVTSTTSPGMAGAGAYRFQQDHQDANQGQGHGASFDTEHEYYRDQAGQQYYDEAPPVPAVPMQRAPL # QPRQQYTFGQVSVGQPAVAENANPFGVDDYDGEHVAYGSQPAAGYYDNSQAYGNYAAYSPPQTAHTAGAHPSGQQASRASIIDESDAYGGI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g83 ### # start gene g84 Scaffold_6 AUGUSTUS gene 386745 387308 0.4 - . g84 Scaffold_6 AUGUSTUS transcript 386745 387308 0.4 - . g84.t1 Scaffold_6 AUGUSTUS stop_codon 386745 386747 . - 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_6 AUGUSTUS CDS 386745 387064 0.43 - 2 transcript_id "g84.t1"; gene_id "g84"; Scaffold_6 AUGUSTUS CDS 387110 387308 0.78 - 0 transcript_id "g84.t1"; gene_id "g84"; Scaffold_6 AUGUSTUS start_codon 387306 387308 . - 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MSLHNAAIDRRTGHFRRAGTAAAANGNGAGDNDDGNGNNTGNGSGNGSGQGSSSAAASSSTAGKFLEPTTAAATSANT # QPTSQSANASGTSQSNSTSASAAAAQTSSSSSSSSVAPTTTSTSSATSTSTSSSTTSSATLSATSQTSSSTISLSQSSIPASTSTSVSIHISFE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g84 ### # start gene g85 Scaffold_6 AUGUSTUS gene 390761 392149 0.16 + . g85 Scaffold_6 AUGUSTUS transcript 390761 392149 0.16 + . g85.t1 Scaffold_6 AUGUSTUS start_codon 390761 390763 . + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_6 AUGUSTUS CDS 390761 391096 0.56 + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_6 AUGUSTUS CDS 391149 391280 0.28 + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_6 AUGUSTUS CDS 391376 392149 0.53 + 0 transcript_id "g85.t1"; gene_id "g85"; Scaffold_6 AUGUSTUS stop_codon 392147 392149 . + 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MYIRRILLLQEVLKSYLLATTTSAATTAAAAATTTSQTAATTTSSSHAVTSAANTTSATTSATTSSSSSSSTSATSSP # TSNTTSSTSSTSKATSTGSSTSAASTPAVATSAETVVVASRTVATYITYTPSSSGTGTAAVASSSTTTTSSGVSAGSIETPFNRCPIQRRIRNRRRDD # EHFDAAQFRNSAVLLDDEFGTDNFSARPPTMIARHMANAPAAPPVTYGNYPGADPYAGGDPFTTGEQFHTGDPYNHYNAYPTYTQEPVYTLNPGETFA # RNPIAPNGSAEMDPTSAHNSYLNRQPTLRGPDTQFAGAPQQHYLDMNRVGSPPNMPASAEYNTGMPSPTSATPLYNPHSSAEHSSVLPTPTTATVSQK # PHAPVEYPSVGTPAPAPPAYYGDAQKRPETVYDPEDAYGGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 Scaffold_6 AUGUSTUS gene 393163 394392 0.98 - . g86 Scaffold_6 AUGUSTUS transcript 393163 394392 0.98 - . g86.t1 Scaffold_6 AUGUSTUS stop_codon 393163 393165 . - 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_6 AUGUSTUS CDS 393163 394392 0.98 - 0 transcript_id "g86.t1"; gene_id "g86"; Scaffold_6 AUGUSTUS start_codon 394390 394392 . - 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MVGSSMFVFDANPHAVHKITSGEEALVCMLFANFDTTWGHPALQDRLRRAGQQPSSQLILNGMTLFGAIWTASRLPEY # QSYKVVWHAMRAHLENEGVLAAVVSRFNAYVVRKGDSAHLDRVSKSKPQRNTYPKIPPRMESTMLTDLEDVGCQTSGDRPSNLSPENPRSFNRVLSTF # SIHDFPPSPVHTSSSPKPLFSHLPIPQMGPSEWAACYEDKEIYNPTTHSFSDLQPHPFPSLCSSPALAQSQTHICQESGHGIATVPNATSSLYRTHGI # EYQQDHLQQPEQHLHLYPPSLASPSFFPETYPETQQPLPEFGASMPSILTSHYPHKHEAQVNSNLTTGRTYWQMTNVPPPYLPYQHNQSPTTFSSNST # VSQDTAFVTLQNNHWRGYADGKFADEYASDAYKLQHE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 Scaffold_6 AUGUSTUS gene 397530 398627 0.75 + . g87 Scaffold_6 AUGUSTUS transcript 397530 398627 0.75 + . g87.t1 Scaffold_6 AUGUSTUS start_codon 397530 397532 . + 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_6 AUGUSTUS CDS 397530 398627 0.75 + 0 transcript_id "g87.t1"; gene_id "g87"; Scaffold_6 AUGUSTUS stop_codon 398625 398627 . + 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MAPFPSQLVNTANISSYFSSFPVRSCELDALPTIQQALNDTIYGCTAPGSKERKKAEYRHTNPAGNLFGLSFALCEAD # RLGYVGKLIEFLCIVDGEYLGMTRVCKEVFSPALVIDVMEDLPFGEACIEHAILRQALYESYDDDQYGGRAVGKMKSYLRELRMELASLNDPCTPLLL # KTLDTSLRDRDSDDAEFQTLAEYIPYRKTNFDYEYVPFLQFTMITGLSWKSCSFVCQLVRWAMNISPKVQENLIVRSYEHTVGVIVGLTNDYFSWEME # RQQPTDRIRNAVPVLMKEHSISEVQAKSMLKEIIIGEESRARELKSEVMNQTEESEQMKRYVTEMELFAAGYSFWCATCPRYHRLQEEYLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 Scaffold_6 AUGUSTUS gene 404789 405559 0.98 - . g88 Scaffold_6 AUGUSTUS transcript 404789 405559 0.98 - . g88.t1 Scaffold_6 AUGUSTUS stop_codon 404789 404791 . - 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_6 AUGUSTUS CDS 404789 405559 0.98 - 0 transcript_id "g88.t1"; gene_id "g88"; Scaffold_6 AUGUSTUS start_codon 405557 405559 . - 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MNPPGRPPPLDGPIQYRNSLANFHQRQLGGGGAGSPSDPGSTFGGGPVPGGPGPNNRISKHGPGLPMPPPSPGMNKDG # SAKDMNMKIEGSPRGGLPPSSAGMTPTASGPANGPSSTPVPPGRPPSSQNPTPNSGPHPGMPSLPPPNMDPSPGSMLGNTPMSGMSGPMSGMPNGIGP # GGMGSGMVGINSSINAMNGAGSDIPFFGSDFMNDIEVGGLDTFDPNLFRDPGGDLNFERDFGQWFNPNDQGLDDSLDPMK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 Scaffold_6 AUGUSTUS gene 408508 410419 0.19 - . g89 Scaffold_6 AUGUSTUS transcript 408508 410419 0.19 - . g89.t1 Scaffold_6 AUGUSTUS stop_codon 408508 408510 . - 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_6 AUGUSTUS CDS 408508 408757 0.34 - 1 transcript_id "g89.t1"; gene_id "g89"; Scaffold_6 AUGUSTUS CDS 408891 410419 0.52 - 0 transcript_id "g89.t1"; gene_id "g89"; Scaffold_6 AUGUSTUS start_codon 410417 410419 . - 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MPITRLPAAGFILADRKDDDVEAETYAKFGWKLRKRDEYKTLLRTNYDSSSRVYTSSIFVDYPGGAKSENLSAGGKAS # RSNVSLSPTRQFPLEKQVTPRASRVELNTLPESSSSDSSLHTIQGVISTSASSPLSAPITPTKFLPSSTPPSFSNIASLSSLSSMTHLSTNGTFNSLN # NINNVNLTQAMPGQRERTASVSNSGFRGRSSSAFTLKGEVRHTTDLLVGEVVIDSKLYPEGYIITLKSKTLKITGKEGKGVKEGERRDESKSPPRAND # SSITKSSANLNATPINLDSLFSSSTSYSTGVATKASISSPSSPSIPPASNSNLNSDSELLEHQLPLSYTLHTIPLSPLHSSGSGMGTGTSSDSHYTYD # YESESPTRHLLKLMLPTAQYCVSTIQDPLTGETQVAPPKPSWLLEMEEGGAVVYVEVKPVQKDADGVGMVKGKVWVVDGRNGVNDSKVGHDTKNKVWN # AKRNIWEVAVVGEKESLTTLGREELLDDRVSKMSILLRSVATNESEALPDDLKTPVGIADSLLDAKTADVYGQMIVADGMDRQSLGDSTEVSSSRTES # GTSDGVVPGHGKLTTFLATCCGLY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 Scaffold_6 AUGUSTUS gene 410530 411405 0.51 - . g90 Scaffold_6 AUGUSTUS transcript 410530 411405 0.51 - . g90.t1 Scaffold_6 AUGUSTUS stop_codon 410530 410532 . - 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_6 AUGUSTUS CDS 410530 411405 0.51 - 0 transcript_id "g90.t1"; gene_id "g90"; Scaffold_6 AUGUSTUS start_codon 411403 411405 . - 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MGVIRRRRAEWDADVLDSPTSENVLNTDGASSTLPKVSSPLARFFTYAVDQATATTQQTIAAISPMAAGANDALLSSS # KLPMQYVLDALSWTQNYHCSTTPQAGWAPVNDKGLSVRRKLVSDISPVIPIHKGEKVIEGISAEELVAVITEPDCRKKWDDRFDSESVFESYGSGCKT # SFMVSKGGFPFRDRGFYIAFVVARAQGSPLGSMRNTDTGTPGSGSGDASGRTGCRNAIYCVSTSFSPDSVSQFSAAMYNQYGLPIGRVYIDAWILETL # DLIRKRITLSRRRSVHD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g90 ### # start gene g91 Scaffold_6 AUGUSTUS gene 411440 413360 0.6 - . g91 Scaffold_6 AUGUSTUS transcript 411440 413360 0.6 - . g91.t1 Scaffold_6 AUGUSTUS stop_codon 411440 411442 . - 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_6 AUGUSTUS CDS 411440 412238 1 - 1 transcript_id "g91.t1"; gene_id "g91"; Scaffold_6 AUGUSTUS CDS 412292 412529 0.94 - 2 transcript_id "g91.t1"; gene_id "g91"; Scaffold_6 AUGUSTUS CDS 412685 413360 0.61 - 0 transcript_id "g91.t1"; gene_id "g91"; Scaffold_6 AUGUSTUS start_codon 413358 413360 . - 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MIIGLLKTVTKRATRIPKLVGYGNGITIEKIRFQIDREALTIEYSVIPEDDSHTDQSRGFEDLLVLRDQRRLTRAIEC # VLPSVEGWDVQLTTKASSEEVEKLPWAAHATRSTSYNSSSDSPLDLVVLRLTHAPLIDDHSVLKVKVVIEISGPSSGLRLNGVPQSIKEPEEQRDPSS # YAAAQSIMLDVGSAADVSLPSSSSVHGSSATSFASSSSAPPLIRVATERTTEARGVTITQLDSIDPTLVVYRAEAAFVGVGLWDLYSAVVSPGARNFW # DKQHEDATLLEDVNDLTELWHIKTKPAWPVNGRDSVVLKTVYKSPTAIHVFSFSADDSHLFPNIPSVDPNVIRTQVDLQGWAIEALSPNTTLLTLLEQ # SDPKGWTNKTSIPIQMINALAGIGEFAIKFGGPPIVTRLAGAKANDLRYDHERFNFRLEYEPHASRRMVGGSPTDNSAATSTSTTSDENSSTPTSPVI # ECEIRCDMDTWGHSLDIVVDPPPQSISCLRRHKLSDEGGGLWLTITHDAVFVDDERLQVIVRRGPGKEKGLVMVNGAKTSVDIEELPEHEIKNFGTEE # TH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 Scaffold_6 AUGUSTUS gene 419280 419486 0.28 + . g92 Scaffold_6 AUGUSTUS transcript 419280 419486 0.28 + . g92.t1 Scaffold_6 AUGUSTUS start_codon 419280 419282 . + 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_6 AUGUSTUS CDS 419280 419486 0.28 + 0 transcript_id "g92.t1"; gene_id "g92"; Scaffold_6 AUGUSTUS stop_codon 419484 419486 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MAATPMLEFADTETDVFPAETAISNDAFEDGEVERNSADARSGMEVNQLIDQGKSNHPHREIAKTFGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g92 ### # start gene g93 Scaffold_6 AUGUSTUS gene 420936 422087 0.16 - . g93 Scaffold_6 AUGUSTUS transcript 420936 422087 0.16 - . g93.t1 Scaffold_6 AUGUSTUS stop_codon 420936 420938 . - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS CDS 420936 421160 0.87 - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS CDS 421292 421426 0.97 - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS CDS 421521 421695 0.2 - 1 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS CDS 421824 421980 0.84 - 2 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS CDS 422081 422087 0.92 - 0 transcript_id "g93.t1"; gene_id "g93"; Scaffold_6 AUGUSTUS start_codon 422085 422087 . - 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MKYKSVAFRKRLNRRLRAISDAKVPTTSIYALSETMASRLAVGNLRAAGGTRNVLRSMSSSNPPPPSERASEIINKLP # SSPNLITKTGTALLGTGLAAAAISQELYVVNEETIALREPYANWAESQVQKIKGVLDTARAEHTQAVKDRIDSVGQMKDVKVVMASELKSVLDSWVRY # EQQQKESEQADLTKSVIDKVLANLKDEKTQRDLLLSAVAEVERKSDLHSVSYVLVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g93 ### # start gene g94 Scaffold_6 AUGUSTUS gene 430940 431512 0.35 + . g94 Scaffold_6 AUGUSTUS transcript 430940 431512 0.35 + . g94.t1 Scaffold_6 AUGUSTUS start_codon 430940 430942 . + 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_6 AUGUSTUS CDS 430940 431512 0.35 + 0 transcript_id "g94.t1"; gene_id "g94"; Scaffold_6 AUGUSTUS stop_codon 431510 431512 . + 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MNVLDTVSSSTHSHEQEMLMNGVFGGMNTNIGSVPSMLGGMNNSQMINVGGMNGSSASSDSLLSMESGMANMNGHPLN # MSLSNASLSPPDNPKRFSTRARSDSAPLYHQQHLSASPSSSSVSPQGWGGVGRPRSGSGLGVLGNPPHGQYGGSHLQRGLTIPSISMPRTGLNGVGGM # GVQTVPSNVQGQSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g94 ### # start gene g95 Scaffold_6 AUGUSTUS gene 439664 440554 0.68 + . g95 Scaffold_6 AUGUSTUS transcript 439664 440554 0.68 + . g95.t1 Scaffold_6 AUGUSTUS start_codon 439664 439666 . + 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_6 AUGUSTUS CDS 439664 439877 0.68 + 0 transcript_id "g95.t1"; gene_id "g95"; Scaffold_6 AUGUSTUS CDS 439935 440554 1 + 2 transcript_id "g95.t1"; gene_id "g95"; Scaffold_6 AUGUSTUS stop_codon 440552 440554 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MVSSFSLALLLVSAASTLLVRADVVPDTPATGTAGSTCSITWTGDSSSSSNWSDMAIEFMTGDNFNMVFLTTVATGLD # GTKSGSYSWTCPEVNPYSAIYFYQFISPVESGNPVWTTRFAIASSSGETTTPPNSTQPDGEAIPWGTGALVDASSVSAVPSFASGVTSGSVPATSATA # SASVSSSSSIAAASSVSTSATSAASASKSASKSAGVVTVSGNTSGAAGAKTTATSVSTTGADEAASTPSSANAGLVLAVDARVWTATFGVISSAVAVA # LFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 Scaffold_6 AUGUSTUS gene 441035 442617 0.22 - . g96 Scaffold_6 AUGUSTUS transcript 441035 442617 0.22 - . g96.t1 Scaffold_6 AUGUSTUS stop_codon 441035 441037 . - 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_6 AUGUSTUS CDS 441035 441526 0.97 - 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_6 AUGUSTUS CDS 442380 442486 0.25 - 2 transcript_id "g96.t1"; gene_id "g96"; Scaffold_6 AUGUSTUS CDS 442590 442617 0.25 - 0 transcript_id "g96.t1"; gene_id "g96"; Scaffold_6 AUGUSTUS start_codon 442615 442617 . - 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MISEFPITGLVALSLALSASAAIFPKDTVVKMLDPKGFRKAMKANSSELILGINKLDSLSKFFESVIDGTADLKIVNE # EAASEEFVPDEAELEIERKQEAQRIALAHGGFANFIDFEDALKKGHNPHGSQGYPGMLGDLPQKKKKPTGSESIAAEPAVETGDAKEQAAFAASEPAP # AATPEPLEVPVEEQASEQASEPEPAPAPKDEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 Scaffold_6 AUGUSTUS gene 445933 446343 0.75 + . g97 Scaffold_6 AUGUSTUS transcript 445933 446343 0.75 + . g97.t1 Scaffold_6 AUGUSTUS start_codon 445933 445935 . + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_6 AUGUSTUS CDS 445933 446343 0.75 + 0 transcript_id "g97.t1"; gene_id "g97"; Scaffold_6 AUGUSTUS stop_codon 446341 446343 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MSALTDILPVETLHEVVSSLDSPSDILSFGISSKALADIAIPHHLKFRVFRVRISRSAAIWRFFAQADLTAGEVRELD # ILPENISDVCHGDYGPDRWMAEPLVPPKELFEGGQAQHFKGRPSFEQTRREKCSLLML] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 Scaffold_6 AUGUSTUS gene 448104 448469 0.83 + . g98 Scaffold_6 AUGUSTUS transcript 448104 448469 0.83 + . g98.t1 Scaffold_6 AUGUSTUS start_codon 448104 448106 . + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_6 AUGUSTUS CDS 448104 448469 0.83 + 0 transcript_id "g98.t1"; gene_id "g98"; Scaffold_6 AUGUSTUS stop_codon 448467 448469 . + 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MPATLIQPSTVPGKLLYFTPPKDGSRPITRINEDANYDSRFNWVQAEHTVPIENIRGKEDSYTLNSAGFQYYQHKSKH # TAFSNDEDIEREYYPESVELIKQLTGASKVVLFDHSALTLLLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g98 ### # start gene g99 Scaffold_6 AUGUSTUS gene 449271 450999 0.18 + . g99 Scaffold_6 AUGUSTUS transcript 449271 450999 0.18 + . g99.t1 Scaffold_6 AUGUSTUS start_codon 449271 449273 . + 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_6 AUGUSTUS CDS 449271 449505 0.34 + 0 transcript_id "g99.t1"; gene_id "g99"; Scaffold_6 AUGUSTUS CDS 449829 449976 0.37 + 2 transcript_id "g99.t1"; gene_id "g99"; Scaffold_6 AUGUSTUS CDS 450054 450260 0.4 + 1 transcript_id "g99.t1"; gene_id "g99"; Scaffold_6 AUGUSTUS CDS 450357 450999 0.49 + 1 transcript_id "g99.t1"; gene_id "g99"; Scaffold_6 AUGUSTUS stop_codon 450997 450999 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MRIPSYERLETDDPSETSTIVSSVHSNHSVAKPATYYGQGPFEAPSSDSEEEDELLERKGPSTPGIAEAGNFNAPYTP # TGDGVFSESTQDGFIKLVDLKTNTTSKLVKKDDIKDVSLNLIALAVLSPIQRGSPEGAHEFPMPPPAIKEVMSQQWRWSSFGNYYIHDIEAKVTRPMI # PPANPPTTAYATWSPTGNSLAPSTAPIRVTTSGNASLFHGVPDWVYEEEIFSSDHALWWSPDAQKVAFLRFDETAVDEFSFPIYNPTENNSAVIPYTS # EVTMKYPKPGYNNPLVSVHVFDLGRYLDSDSVVVNGFPAANATLELDWPGRHPISNSIIMEVAWVDDTQLLLKEVNRNADSGSVVFFDLSSSDDKARS # RGTVVRKLGKEGEEGDDGWIDNVGIIQACSRTVQSLER] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g99 ### # start gene g100 Scaffold_6 AUGUSTUS gene 453210 453752 0.59 + . g100 Scaffold_6 AUGUSTUS transcript 453210 453752 0.59 + . g100.t1 Scaffold_6 AUGUSTUS start_codon 453210 453212 . + 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_6 AUGUSTUS CDS 453210 453752 0.59 + 0 transcript_id "g100.t1"; gene_id "g100"; Scaffold_6 AUGUSTUS stop_codon 453750 453752 . + 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MPSPFLVQRPTTSSLSKTASKNKNLRPKGLWKARVTDSAPRLLHGTANSEATHDSDSDNELEDLDELEIRSSTSSTKR # RRLSSSESSGSDSAAELYYWDYSRQCTPPPKRESSWTRRTRIMDTSSLALKGTQTTSKSTCDYEDWEDLKDLFSKAVEQYEGLLIIRCEVLVFINSDL # PYRQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 Scaffold_6 AUGUSTUS gene 454488 455099 0.67 + . g101 Scaffold_6 AUGUSTUS transcript 454488 455099 0.67 + . g101.t1 Scaffold_6 AUGUSTUS start_codon 454488 454490 . + 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_6 AUGUSTUS CDS 454488 455099 0.67 + 0 transcript_id "g101.t1"; gene_id "g101"; Scaffold_6 AUGUSTUS stop_codon 455097 455099 . + 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MDQFSRGIFHMPHPSHAVPPSGKPLSSGAAPALDSFSRAKELFTIGSEALLVAEKLENPSERKYWASWSDSVFNQMKM # EADVDAWRGPINRARGQCCLIVGTAQAEEFEEALENGDESVLRSEDADEAREALMDAISFLEKAKSAATSTDMDQDDDELQHFLEEALLTLANLTLDE # KKREDLYLRAQKESGGAIDLSDEMDES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g101 ### # start gene g102 Scaffold_6 AUGUSTUS gene 460087 462576 0.69 + . g102 Scaffold_6 AUGUSTUS transcript 460087 462576 0.69 + . g102.t1 Scaffold_6 AUGUSTUS start_codon 460087 460089 . + 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_6 AUGUSTUS CDS 460087 462576 0.69 + 0 transcript_id "g102.t1"; gene_id "g102"; Scaffold_6 AUGUSTUS stop_codon 462574 462576 . + 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MYSHHRYPSQPHHLPSNHTSRRGSPIPAHNTGVSAPDRERDRERQRYVPPPPPPSAPMASSSRRYNTSSVPPPSASMG # NFSSREKELRDFDRERETRERERERDFREREREQQQQRNRERDGGYRIIGSGMSLGPGPASGPEPPPPSQPHSRGDPREREMFHYRERERVERERERD # RMDRIDRERDRELYNRDRERDRDRERDRERDRERERERMNMSLAMNERERERDLLRERERERTRLAVIGDMASSSSTSAPPPPGLPILMDVDGQMYGN # DPFMPVRMADHHGHGYPSFPNHDPRAMGQMGPVGQLGPMAPNGPMGMPPNMNMSMAAGGSVTMGMGMEPVVGLGPTSNTAMVPIPDGLEEPPEREVKS # RVKIDLGTYVWPKTPPFPFSFAESKWQAFPDRSNKENEVDQKGETKGSGGGVYKMVVDGEVISKRDEDKREPTIVTNGGNSAANTSSTTALNVTDLPN # ADKHILDSETLVTIVIPNAFIPLEKPKPGSRNKYRVWGGGLPPRNGSNELFGGTRHGRERESNPEYEQMRAGYQEKVAANPSHTSNSIPSSHKKRPPR # RRRIYTDDSDIFVCALHAGWISWSSAKKAREEGKDLKVRLRIIRCLGVREDVGASVRNEAPFQVTGNAFPGPGRNANDPNGPWVQGQRSAPPTMNGFS # ASSSSGTGTDSSLSAAAGFIGGRRGREEVVVRFIGGMGEKYFGGDIKRTKAKSEPAQAQVKTMEKELEKLKEKEKQVEEEKEEGELKEEGELDQDPLP # EPDVANSVPLIVEEEEEEEEVPDGGPEDDGRSLLSASWGIGHDGSGIEVIDVEFVPVSSFTFGFA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 Scaffold_6 AUGUSTUS gene 462680 463582 1 + . g103 Scaffold_6 AUGUSTUS transcript 462680 463582 1 + . g103.t1 Scaffold_6 AUGUSTUS start_codon 462680 462682 . + 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_6 AUGUSTUS CDS 462680 463582 1 + 0 transcript_id "g103.t1"; gene_id "g103"; Scaffold_6 AUGUSTUS stop_codon 463580 463582 . + 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MFARDDAKTKKKVPYITTSLAGRKRPRGAFESSHPIHMPRWGFGSASRPHPNAVALDTILEEDSAAFAGRTMSFEESS # KERKISEQRTLVFGKGAEIWYVDSVNTSHFNTHRDPFSYRFKYSPDSLRAVFTPNDDDLVERPMKRKRLDTNEPPSSKPHPPLLIKWDDSDRCCILRP # EPADVTSLYALFVTQQSVANDYLHYHLPDSIPSIPPSSSSDVLMKDIHTKPESSQLTAISASSVSPVRELIADDWMVEPYCVHTKEEHVWLLQSEVLE # FIASGIMINKTRTLPVTKWKFILESD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 Scaffold_6 AUGUSTUS gene 464599 465129 0.99 + . g104 Scaffold_6 AUGUSTUS transcript 464599 465129 0.99 + . g104.t1 Scaffold_6 AUGUSTUS start_codon 464599 464601 . + 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_6 AUGUSTUS CDS 464599 465129 0.99 + 0 transcript_id "g104.t1"; gene_id "g104"; Scaffold_6 AUGUSTUS stop_codon 465127 465129 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MATQQPLARFSGDPDDSVQPATFLQDFEVRMTELMTLRVDLAGRIKPYLEHDSRVWEWYMEDLTATDRTGAWEAFKAK # FHARFPSQKKEKKSAKSYLTSLEGEHITHEMIMKTSEDTNQPYHQWWADQLLRLAKGAEVEKTKQSIGTVWKHLPYALKKVIDEEHDNWGSLPLPSKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 Scaffold_6 AUGUSTUS gene 466293 467138 0.45 - . g105 Scaffold_6 AUGUSTUS transcript 466293 467138 0.45 - . g105.t1 Scaffold_6 AUGUSTUS stop_codon 466293 466295 . - 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_6 AUGUSTUS CDS 466293 467138 0.45 - 0 transcript_id "g105.t1"; gene_id "g105"; Scaffold_6 AUGUSTUS start_codon 467136 467138 . - 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MRSLLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGY # LPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKVGPLDYR # LDLPLSLDRLHPVFHVDKLYPWKGNPINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAPNLSRAPKIVRAFHKK # HPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 Scaffold_6 AUGUSTUS gene 467903 469999 0.98 - . g106 Scaffold_6 AUGUSTUS transcript 467903 469999 0.98 - . g106.t1 Scaffold_6 AUGUSTUS stop_codon 467903 467905 . - 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_6 AUGUSTUS CDS 467903 469999 0.98 - 0 transcript_id "g106.t1"; gene_id "g106"; Scaffold_6 AUGUSTUS start_codon 469997 469999 . - 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MFATSSYDSLPSCTISSIWELNSSSPHFRIHAKLRGRNHSITTAAMVDCGATALFLNQDFATRNHVTCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVHIEEVEDEQTSHPHLVASTTDSPIQELLN # EGSQREPNHTEADLEENEIITATEESPIHRIRANHKTRRAWVKAGILEEQTEEVWCSAGFTYSQQLAEEANRDKPIKTFEEMVPEQYRDFKKVFSESA # SERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVAD # IISRLQGARYFTKFDVRWGYNNVRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLKEHRQVVRE # VLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFARIARPLNDLTKKDTSFNWTGTQ # QEAFDTLREAFISAPILALWAPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDII # TDTPTSNSGAQHKTLPVDKPDGPSIYHGLIFI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # start gene g107 Scaffold_6 AUGUSTUS gene 470050 471678 0.96 - . g107 Scaffold_6 AUGUSTUS transcript 470050 471678 0.96 - . g107.t1 Scaffold_6 AUGUSTUS stop_codon 470050 470052 . - 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_6 AUGUSTUS CDS 470050 471678 0.96 - 0 transcript_id "g107.t1"; gene_id "g107"; Scaffold_6 AUGUSTUS start_codon 471676 471678 . - 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MCLLIITYDYDTQYISVIIWDQFASAPLSRSASLPGLVTPLPAPLVTPPLPLRDIRSRSITALTQPTDKVVLAGSVDT # TSSPVPPDSETPAASIDCSTLPHALDPRDQAHAHNNNDTWRDCQSQPCPNALSNSIREPLTVSNITFLPIPQPRLPTPIMSTPVPPAPNTSAEDLMAQ # LIRQVASLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFSAENPPFGGNWDTFL # KEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLIIVNIAQGIAPTLKEAIKRAISVDVYLHDP # TMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARMRGRCFGCGAQGHVKQNCPHKETTCRYCGRRGHLESVCQDKFMGLSRDRGRRQQ # PRRQQISATAAPFTLFPNESVQIAASIPTPVAGPAIPSPANQDFSTQIGQIRELLDRANAMSPPSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 Scaffold_6 AUGUSTUS gene 472232 472789 0.56 + . g108 Scaffold_6 AUGUSTUS transcript 472232 472789 0.56 + . g108.t1 Scaffold_6 AUGUSTUS start_codon 472232 472234 . + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_6 AUGUSTUS CDS 472232 472789 0.56 + 0 transcript_id "g108.t1"; gene_id "g108"; Scaffold_6 AUGUSTUS stop_codon 472787 472789 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MLEGSRQCGGGGGRWDFEVFDSRGSWKFLFGKPLLEQFLAVHDYGKDAIRLQGKRGKWREVFNKGLGVALPAGPADRL # EESSQQEILSSSTDEYAVLEESEGPLSGVTVKALTPLSRKVEDLNHVQQEQVTNSPPQPVPQSEPKRQHQKPQVEDIPDGDTKQPRVPSAEQSSTLDS # VFPIASEEW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 Scaffold_6 AUGUSTUS gene 476238 477176 0.17 + . g109 Scaffold_6 AUGUSTUS transcript 476238 477176 0.17 + . g109.t1 Scaffold_6 AUGUSTUS start_codon 476238 476240 . + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_6 AUGUSTUS CDS 476238 476706 0.35 + 0 transcript_id "g109.t1"; gene_id "g109"; Scaffold_6 AUGUSTUS CDS 476857 477176 0.26 + 2 transcript_id "g109.t1"; gene_id "g109"; Scaffold_6 AUGUSTUS stop_codon 477174 477176 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MSKGKGGYKTIGLYLDTYLQRVWAFKFKVAGSGATTSASLHSLFNGYLLLETFMTDNGTHFANKEVEALCAKWGTKQH # FTPAYSPWVNGLVEVLTNSAPCSEASVCTKLGEDSEEFTAMTWDILPDKWPEFLEEAVRIINNRILPSVKFSPNELLLVFDRQVLKKEGKEVVYRKGD # LVQVYWSDHDYTFKTIKKIIPKWSRPYRVVEQSINSYTLETVDGQLIEGKQFNAQRLREFKPRLGTKLAIAQQEVIHRREEAGEDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 Scaffold_6 AUGUSTUS gene 489909 490559 0.96 - . g110 Scaffold_6 AUGUSTUS transcript 489909 490559 0.96 - . g110.t1 Scaffold_6 AUGUSTUS stop_codon 489909 489911 . - 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_6 AUGUSTUS CDS 489909 490559 0.96 - 0 transcript_id "g110.t1"; gene_id "g110"; Scaffold_6 AUGUSTUS start_codon 490557 490559 . - 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MLLDPFSVKCTKEVFEALHSHQKLLGELAIAPEDFSAETVPCLSWKPDPKIQINPTVYNGGLLDTDLAAIHNWIFVKL # PQPAEMEHLDMLHYTTAHARTLLLAYQHREEFLNNAPDNLADVDQYIVHQAWNRLVAWTGLSVDGKSKRSKGADVNYEAVSLLDKIMFDESSRAGVAG # NHQWGLDVGPHEMGWNPQFTGPNVTVGKRREGNDDEEVLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 Scaffold_6 AUGUSTUS gene 490928 492166 0.68 - . g111 Scaffold_6 AUGUSTUS transcript 490928 492166 0.68 - . g111.t1 Scaffold_6 AUGUSTUS stop_codon 490928 490930 . - 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_6 AUGUSTUS CDS 490928 492166 0.68 - 0 transcript_id "g111.t1"; gene_id "g111"; Scaffold_6 AUGUSTUS start_codon 492164 492166 . - 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MEHCRVQMQRKGLGWSPLASQWDQHQGSIQKWFSSLTQVQPLSDVYSTSGCWRRVYEDGALVKVCSGQSQQSQYIIDI # PVILIIQPDVSAGKHWDYPLRLLPGSLAEARKGIVYDLVGRIFQSHNHFMAHTSVPTTSRGMSVFAYDSLKHQGYSQRLHGKASNLIAGISPPCPLGF # QTHAAVYKLKGGLAGQNIFRTRQKSAIRNILNISLDSDPPTLHSPNWIECSVDDRSHWKTREYQLSQPNLPNSIMENASLPPPEDILPEGADFQYGDP # TELPFIPSPTSTSMVLDPTVNPCTPEPQAPALFIPDSPISSIASSSPLPSSPHYIHCRCGVEANGYRESIQQDSIQCSICSKYTYTACLTMRFYDKSA # EEFLCHECDVQQEYDNFSQFRHTLPYLRKQKLNTVKNRLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 Scaffold_6 AUGUSTUS gene 492541 493314 0.56 - . g112 Scaffold_6 AUGUSTUS transcript 492541 493314 0.56 - . g112.t1 Scaffold_6 AUGUSTUS stop_codon 492541 492543 . - 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_6 AUGUSTUS CDS 492541 492842 0.91 - 2 transcript_id "g112.t1"; gene_id "g112"; Scaffold_6 AUGUSTUS CDS 492966 493094 0.94 - 2 transcript_id "g112.t1"; gene_id "g112"; Scaffold_6 AUGUSTUS CDS 493149 493314 0.58 - 0 transcript_id "g112.t1"; gene_id "g112"; Scaffold_6 AUGUSTUS start_codon 493312 493314 . - 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MAADLAAKLPATTNAEEAMHATIYSAVGINHPLLKGLDGLLAVEKLFCIESQNALLHVKSHYGKSGCELRKELYQQHG # TTHPSRKHPWGAAKERRRGRPSSTISPPSHVIPSSDDSDNEPAKTANELHKAQQKIQLMSPTKLNARPSQPDFGPIKSTTTSELPSAKWDRNSCWLDS # SMEVLFVLWHFTILLKSLKIWF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 Scaffold_6 AUGUSTUS gene 508359 509525 0.9 + . g113 Scaffold_6 AUGUSTUS transcript 508359 509525 0.9 + . g113.t1 Scaffold_6 AUGUSTUS start_codon 508359 508361 . + 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_6 AUGUSTUS CDS 508359 509525 0.9 + 0 transcript_id "g113.t1"; gene_id "g113"; Scaffold_6 AUGUSTUS stop_codon 509523 509525 . + 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 Scaffold_6 AUGUSTUS gene 509576 513291 0.43 + . g114 Scaffold_6 AUGUSTUS transcript 509576 513291 0.43 + . g114.t1 Scaffold_6 AUGUSTUS start_codon 509576 509578 . + 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_6 AUGUSTUS CDS 509576 510928 0.44 + 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_6 AUGUSTUS CDS 511015 513291 0.59 + 0 transcript_id "g114.t1"; gene_id "g114"; Scaffold_6 AUGUSTUS stop_codon 513289 513291 . + 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAHDLYLRPEKCEFEQQQIEY # LGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPT # RIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYL # SRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDN # GLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLIT # QLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIKSDLTSGYRPQSNGQTERANQE # VEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDAGAALHLGKKQQKEGYERGKRK # AHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEIPTPPEPVYLEDEDEPEYEVEE # ILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 Scaffold_6 AUGUSTUS gene 516126 517088 0.94 + . g115 Scaffold_6 AUGUSTUS transcript 516126 517088 0.94 + . g115.t1 Scaffold_6 AUGUSTUS start_codon 516126 516128 . + 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_6 AUGUSTUS CDS 516126 517088 0.94 + 0 transcript_id "g115.t1"; gene_id "g115"; Scaffold_6 AUGUSTUS stop_codon 517086 517088 . + 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MVKEYPDEGYYEVVLPPLSQLEGDLNKAREDLRRVATLAHRLHCSDPATVLHHHHRYIGAIIEAVVAFLRRGLESEDP # DIATHNLHLALDYMQAARGVHGDLYIRSISSIQWFFNNAVDEDEGLYRLVLEHSRFDNDSPFLTAAQHAGFAPPPDNSLEPPLHRRMLALSTALPHSD # GVGRWDDLVPALPSVDQLTVDWEQLMLRYIHHITDVPLSGTDTQVPMSSVEPGTESLAEVTVEQLPEAPPLFLPEQESPTSPSPPPTSPTLPPPFASL # ANLTIDLTGDDDDLYETEESRMARVSMSREVVDSVAVQSVVKEEPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 Scaffold_6 AUGUSTUS gene 517363 519261 0.43 - . g116 Scaffold_6 AUGUSTUS transcript 517363 519261 0.43 - . g116.t1 Scaffold_6 AUGUSTUS stop_codon 517363 517365 . - 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_6 AUGUSTUS CDS 517363 519261 0.43 - 0 transcript_id "g116.t1"; gene_id "g116"; Scaffold_6 AUGUSTUS start_codon 519259 519261 . - 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MISAELNYDIYDKELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQARWAELLSGYDFVINYRPGR # LGAKPDALTRRSDVYPKKGASRDQVLAGRERVLIPPERLNATILMNEDLLVNRVREAPKDTTIIEALKRIARNEEEFSWEDGLIKRGGRIYVPDVGTL # RREVLQSYHDHKLRGHPGEKRTKKLVNQLFFWKGLSKDVNYYVRSCHSCLRAKASRSKPYGNLRPLPIGQRPWSSISLDHITQLPATAGPEKYDAILV # VVCRLTKQAIYVPCHTTDKAEDFANLFITYVFSKHGMPSDITSDRGSLFVSQFWRELCRALGIESRLSTAYHPQTDGQTERVNQSVEAYLRIYCSYDQ # DDWDLLLPMAEFVYNNTPNTTTGVSPFFANKGYHPKLSITLEQVQGAEVNEYASNLKELHAYLQERIGVANKAYAKYANQKRQEAPDWKEGDQVWLNM # ENVRTRRPMKKLDHKWTGPYTILSKVGSRAYRLDLPGDLHKIHNVFHVDRLKPHFHDKFKRQTSPPPPIFIKGETEHFVEDILDSKPKKGRPEEVEYL # VKWEGYNDEFNSWVGWEGMVGSIELLRSWHKHHPRKRQPSRLQWASLEREAREDEEEDREGRRE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # start gene g117 Scaffold_6 AUGUSTUS gene 520710 521606 0.54 - . g117 Scaffold_6 AUGUSTUS transcript 520710 521606 0.54 - . g117.t1 Scaffold_6 AUGUSTUS stop_codon 520710 520712 . - 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_6 AUGUSTUS CDS 520710 521606 0.54 - 0 transcript_id "g117.t1"; gene_id "g117"; Scaffold_6 AUGUSTUS start_codon 521604 521606 . - 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQRPPEAPQPPPEVPQQTPEAPLRAPRTRVKLEEVKDEEYEASQPG # PHKLFPSDKDLGPDDPILMGINEWLAFASESTEEEVEEILEAGRSAMEKVTPKPTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYPDL # PTLDIESLNIPKIPSRSGLTPKVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g117 ### # start gene g118 Scaffold_6 AUGUSTUS gene 525476 526105 0.98 - . g118 Scaffold_6 AUGUSTUS transcript 525476 526105 0.98 - . g118.t1 Scaffold_6 AUGUSTUS stop_codon 525476 525478 . - 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_6 AUGUSTUS CDS 525476 526105 0.98 - 0 transcript_id "g118.t1"; gene_id "g118"; Scaffold_6 AUGUSTUS start_codon 526103 526105 . - 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MSATSTERPSSSKTESKKQKSALSRGNTTQAQKSNQAASSTVITVAAGQRLMSIPEQSFGDETASNIRTPEGRQPEVQ # GPPPVEPGMGPPQRRFTSMGYAQPASSPMGGFAYSPTWGTRGPPPGPIPQLDMESASNAGGRVSGQVAAIERIQGGVLTLSQYDNRRNFQRGGYPLPY # PNNLGRHPGGYQHLQYSPLTFLPRDEEVHSPVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g118 ### # start gene g119 Scaffold_6 AUGUSTUS gene 541620 541904 0.49 + . g119 Scaffold_6 AUGUSTUS transcript 541620 541904 0.49 + . g119.t1 Scaffold_6 AUGUSTUS start_codon 541620 541622 . + 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_6 AUGUSTUS CDS 541620 541904 0.49 + 0 transcript_id "g119.t1"; gene_id "g119"; Scaffold_6 AUGUSTUS stop_codon 541902 541904 . + 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MVSKAAKSKAKHDLLKGDISKYIDSLQVIIPKLTDWYNITGYEYERHFGLESEADTQFHSLVQEYQELNKQLAEKIIQ # DGGILSDAVDISPLKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 Scaffold_6 AUGUSTUS gene 542905 543162 0.52 + . g120 Scaffold_6 AUGUSTUS transcript 542905 543162 0.52 + . g120.t1 Scaffold_6 AUGUSTUS start_codon 542905 542907 . + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_6 AUGUSTUS CDS 542905 543162 0.52 + 0 transcript_id "g120.t1"; gene_id "g120"; Scaffold_6 AUGUSTUS stop_codon 543160 543162 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MTVSIQGIIIRAYSHCCDHKIHIDWDARKQDMELNFDNDDSPTLQALNKSQPQVYSDSAYNDSEYNDGVHTICSSISA # FLTICTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 Scaffold_6 AUGUSTUS gene 549560 550144 0.56 + . g121 Scaffold_6 AUGUSTUS transcript 549560 550144 0.56 + . g121.t1 Scaffold_6 AUGUSTUS start_codon 549560 549562 . + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_6 AUGUSTUS CDS 549560 550144 0.56 + 0 transcript_id "g121.t1"; gene_id "g121"; Scaffold_6 AUGUSTUS stop_codon 550142 550144 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MSSTPVDLSDHTATTNCSALQHALDPRNQHHIHHIGDSWYDCDSQPCPHALSNSVQNPITKEDTTFLPIPHPRLPTPT # MSTPTLPAPSTSAEDLMTQLIRQVANLATAMEEHSSSKSSMNNPKVFKGKDGSEAHCFMAQFQNWASEQPDLAKSQVKLIKSALGFFIESAGDWATPH # LLHFSAENPLSEEIGICS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g121 ### # start gene g122 Scaffold_6 AUGUSTUS gene 552553 554237 0.34 + . g122 Scaffold_6 AUGUSTUS transcript 552553 554237 0.34 + . g122.t1 Scaffold_6 AUGUSTUS start_codon 552553 552555 . + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_6 AUGUSTUS CDS 552553 552808 0.96 + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_6 AUGUSTUS CDS 552880 553241 0.51 + 2 transcript_id "g122.t1"; gene_id "g122"; Scaffold_6 AUGUSTUS CDS 553533 554237 0.87 + 0 transcript_id "g122.t1"; gene_id "g122"; Scaffold_6 AUGUSTUS stop_codon 554235 554237 . + 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRPIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPGGPR # SPISPDIPNEQRAMLELLSGFKGSIETLGTDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLP # EPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRP # AFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g122 ### # start gene g123 Scaffold_6 AUGUSTUS gene 555050 558181 0.24 + . g123 Scaffold_6 AUGUSTUS transcript 555050 558181 0.24 + . g123.t1 Scaffold_6 AUGUSTUS start_codon 555050 555052 . + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_6 AUGUSTUS CDS 555050 555431 0.6 + 0 transcript_id "g123.t1"; gene_id "g123"; Scaffold_6 AUGUSTUS CDS 555485 555964 0.28 + 2 transcript_id "g123.t1"; gene_id "g123"; Scaffold_6 AUGUSTUS CDS 557088 558181 0.95 + 2 transcript_id "g123.t1"; gene_id "g123"; Scaffold_6 AUGUSTUS stop_codon 558179 558181 . + 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MEPILLRAIHSEVAARAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYP # LSEKELVALKDFIDKQLATGAITPSSSPHGAPVLFVPKKDGKLRLCVDFHLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMP # FGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEW # PVPRKVKDIQSFLAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADGQTER # VNQTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADR # KRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNV # AEILDSKLDRRYKRCPLRYTFGGPVTKVPTMNSPGLLLMNYMLTNLYRRSTPDTLTNLDLDHKKSFYSISLFRRAPPKSTLCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g123 ### # start gene g124 Scaffold_6 AUGUSTUS gene 561468 561935 0.19 + . g124 Scaffold_6 AUGUSTUS transcript 561468 561935 0.19 + . g124.t1 Scaffold_6 AUGUSTUS start_codon 561468 561470 . + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_6 AUGUSTUS CDS 561468 561935 0.19 + 0 transcript_id "g124.t1"; gene_id "g124"; Scaffold_6 AUGUSTUS stop_codon 561933 561935 . + 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKT # RQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g124 ### # start gene g125 Scaffold_6 AUGUSTUS gene 562037 563531 0.13 + . g125 Scaffold_6 AUGUSTUS transcript 562037 563531 0.13 + . g125.t1 Scaffold_6 AUGUSTUS start_codon 562037 562039 . + 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_6 AUGUSTUS CDS 562037 562602 0.42 + 0 transcript_id "g125.t1"; gene_id "g125"; Scaffold_6 AUGUSTUS CDS 562722 562972 0.34 + 1 transcript_id "g125.t1"; gene_id "g125"; Scaffold_6 AUGUSTUS CDS 563194 563531 0.62 + 2 transcript_id "g125.t1"; gene_id "g125"; Scaffold_6 AUGUSTUS stop_codon 563529 563531 . + 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKV # EDEFKDLLGIKLESLIPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGVDIMTPVNSSNGKMAKENAKGMINSIPPSGPSNQSNRLERNAT # PRSSNGTQWACFLMPRDDPNIPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVHVFNQDMR # FEAPKSIDRPLKKSSVTIEDVDESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPNQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEE # DIAKKIFDAKWI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g125 ### # start gene g126 Scaffold_6 AUGUSTUS gene 564785 565616 0.62 + . g126 Scaffold_6 AUGUSTUS transcript 564785 565616 0.62 + . g126.t1 Scaffold_6 AUGUSTUS start_codon 564785 564787 . + 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_6 AUGUSTUS CDS 564785 564807 0.62 + 0 transcript_id "g126.t1"; gene_id "g126"; Scaffold_6 AUGUSTUS CDS 564863 565616 0.73 + 1 transcript_id "g126.t1"; gene_id "g126"; Scaffold_6 AUGUSTUS stop_codon 565614 565616 . + 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MEGSSLNPLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRY # ESRQRKKGKAQDSKDKKENVQPDLLNEPPTNKLEERIKLNQQDRSPINLIDETNKEVVNEAIGVEEPINLNTEEVFTKYKPVDKKVNPIKATLPDEFR # IERHIHGDPLLELPELLKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGPLKMNSFHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g126 ### # start gene g127 Scaffold_6 AUGUSTUS gene 566335 568075 0.53 + . g127 Scaffold_6 AUGUSTUS transcript 566335 568075 0.53 + . g127.t1 Scaffold_6 AUGUSTUS start_codon 566335 566337 . + 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_6 AUGUSTUS CDS 566335 567266 0.58 + 0 transcript_id "g127.t1"; gene_id "g127"; Scaffold_6 AUGUSTUS CDS 567435 567563 0.84 + 1 transcript_id "g127.t1"; gene_id "g127"; Scaffold_6 AUGUSTUS CDS 567682 568075 0.9 + 1 transcript_id "g127.t1"; gene_id "g127"; Scaffold_6 AUGUSTUS stop_codon 568073 568075 . + 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLLIKKFQVDDQGRLYHRNTDQPDQPQLVVDKEKRMHMLNSAHDLQMKLLKAPPTLMHTPSLF # QKVHVNTMIMSIPSKGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQVSRS # GRGGVTNGAGKRSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g127 ### # start gene g128 Scaffold_6 AUGUSTUS gene 570808 572241 0.54 - . g128 Scaffold_6 AUGUSTUS transcript 570808 572241 0.54 - . g128.t1 Scaffold_6 AUGUSTUS stop_codon 570808 570810 . - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_6 AUGUSTUS CDS 570808 572241 0.54 - 0 transcript_id "g128.t1"; gene_id "g128"; Scaffold_6 AUGUSTUS start_codon 572239 572241 . - 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g128 ### # start gene g129 Scaffold_6 AUGUSTUS gene 572292 573458 0.94 - . g129 Scaffold_6 AUGUSTUS transcript 572292 573458 0.94 - . g129.t1 Scaffold_6 AUGUSTUS stop_codon 572292 572294 . - 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_6 AUGUSTUS CDS 572292 573458 0.94 - 0 transcript_id "g129.t1"; gene_id "g129"; Scaffold_6 AUGUSTUS start_codon 573456 573458 . - 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g129 ### # start gene g130 Scaffold_6 AUGUSTUS gene 574250 575026 0.77 + . g130 Scaffold_6 AUGUSTUS transcript 574250 575026 0.77 + . g130.t1 Scaffold_6 AUGUSTUS start_codon 574250 574252 . + 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_6 AUGUSTUS CDS 574250 575026 0.77 + 0 transcript_id "g130.t1"; gene_id "g130"; Scaffold_6 AUGUSTUS stop_codon 575024 575026 . + 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MERLKERIWTYARPLIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRIL # TRDELIGYRAQALSKHNSFIEKVRRRVDANKIAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDG # TVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g130 ### # start gene g131 Scaffold_6 AUGUSTUS gene 575287 575502 1 - . g131 Scaffold_6 AUGUSTUS transcript 575287 575502 1 - . g131.t1 Scaffold_6 AUGUSTUS stop_codon 575287 575289 . - 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_6 AUGUSTUS CDS 575287 575502 1 - 0 transcript_id "g131.t1"; gene_id "g131"; Scaffold_6 AUGUSTUS start_codon 575500 575502 . - 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MTKSRQDSGSDSSASDASFATAQSIPTTGSEDTIITPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g131 ### # start gene g132 Scaffold_6 AUGUSTUS gene 576009 577309 0.2 - . g132 Scaffold_6 AUGUSTUS transcript 576009 577309 0.2 - . g132.t1 Scaffold_6 AUGUSTUS stop_codon 576009 576011 . - 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_6 AUGUSTUS CDS 576009 576280 0.85 - 2 transcript_id "g132.t1"; gene_id "g132"; Scaffold_6 AUGUSTUS CDS 576362 576497 0.75 - 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_6 AUGUSTUS CDS 577142 577309 0.45 - 0 transcript_id "g132.t1"; gene_id "g132"; Scaffold_6 AUGUSTUS start_codon 577307 577309 . - 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNSPDKATISVLRRSTEYLHDLLNRRSTPYPTTGSNKGSNKEEKS # AVNDVSPRLSKVHCHADSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRARIAKVIADEACSILKS # VATRQEAGGGRSRYA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g132 ### # start gene g133 Scaffold_6 AUGUSTUS gene 579591 580293 0.43 - . g133 Scaffold_6 AUGUSTUS transcript 579591 580293 0.43 - . g133.t1 Scaffold_6 AUGUSTUS stop_codon 579591 579593 . - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_6 AUGUSTUS CDS 579591 580027 1 - 2 transcript_id "g133.t1"; gene_id "g133"; Scaffold_6 AUGUSTUS CDS 580086 580293 0.43 - 0 transcript_id "g133.t1"; gene_id "g133"; Scaffold_6 AUGUSTUS start_codon 580291 580293 . - 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MRMVSSKDLDVFASLRGKESSAVALKATTSSPPLEIQSSTSVSKAFVAPPRLIRRNRELENLKADASSFLASPRSAHS # KDSDNELLSGFPSAGSAPVASSSTKVSIGKGEPKSKTTVKVVEDSKADRPLPAGMAYKRIRLPPRSRKNTSIASKGKARQIVVTDEGSTSNEVESEDE # AEDEDIAPPPKRLKTTSSISGRIFILHFSSHFINLIRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g133 ### # start gene g134 Scaffold_6 AUGUSTUS gene 586164 587330 0.92 + . g134 Scaffold_6 AUGUSTUS transcript 586164 587330 0.92 + . g134.t1 Scaffold_6 AUGUSTUS start_codon 586164 586166 . + 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_6 AUGUSTUS CDS 586164 587330 0.92 + 0 transcript_id "g134.t1"; gene_id "g134"; Scaffold_6 AUGUSTUS stop_codon 587328 587330 . + 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTA # LLPEIRQHLITVNIAQGIAPTLKEAIKRAISVDVYLHDPTMTGRNSGYPPTHTAHTTPADPHAMDIDATHTSNGNTREAFLARMRGRCFGCGAQGHVK # QNCPHRETTCRYCGRRGHLEAVCQDKFMGLGRDRGRRQQPRRQQISATGPAPFSLFPNESVQIASSTPTSAPAPVAATPSPPNQDFSNQIGQIRELLD # RANAMSSSSSGFQQGF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g134 ### # start gene g135 Scaffold_6 AUGUSTUS gene 588037 590273 0.93 + . g135 Scaffold_6 AUGUSTUS transcript 588037 590273 0.93 + . g135.t1 Scaffold_6 AUGUSTUS start_codon 588037 588039 . + 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_6 AUGUSTUS CDS 588037 588081 0.93 + 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_6 AUGUSTUS CDS 588204 590273 0.93 + 0 transcript_id "g135.t1"; gene_id "g135"; Scaffold_6 AUGUSTUS stop_codon 590271 590273 . + 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MGKSRNSRGTDGGSLNPPPNDYLPTNLGTMIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISS # PVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQAL # MNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGF # LGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTDTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQ # PAERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDN # RQQTVLKPGHFVKIAASILQNPLEDRIRKASEREAQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPG # LHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARKKIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHLFLAPAPSQPKA # LPIFTTERSSVSMVFLFTLNPTADPSLQLNSCDPFSLG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g135 ### # start gene g136 Scaffold_6 AUGUSTUS gene 591572 592168 0.85 - . g136 Scaffold_6 AUGUSTUS transcript 591572 592168 0.85 - . g136.t1 Scaffold_6 AUGUSTUS stop_codon 591572 591574 . - 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_6 AUGUSTUS CDS 591572 592017 0.93 - 2 transcript_id "g136.t1"; gene_id "g136"; Scaffold_6 AUGUSTUS CDS 592126 592168 0.88 - 0 transcript_id "g136.t1"; gene_id "g136"; Scaffold_6 AUGUSTUS start_codon 592166 592168 . - 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MEEEQQFEYSTLYTTIARRTGKQPQCCATSQSPRDPPPHFDLDAGDHDDQDPPVDPDDPGADNDNDNLDDDSGSLPRG # EPGDPSGPGGPGGPGSPGSPGGPGGPRSPISPDIPNKQCAMLNLLSGFKGSIETLGSVLAACQVHASGLHSATQYVTKRQRRSD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g136 ### # start gene g137 Scaffold_6 AUGUSTUS gene 612017 612964 0.29 + . g137 Scaffold_6 AUGUSTUS transcript 612017 612964 0.29 + . g137.t1 Scaffold_6 AUGUSTUS start_codon 612017 612019 . + 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_6 AUGUSTUS CDS 612017 612964 0.29 + 0 transcript_id "g137.t1"; gene_id "g137"; Scaffold_6 AUGUSTUS stop_codon 612962 612964 . + 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MRETHSDIEEEQYEVEYPTLPPQLKQNPNQYYYHFQEQQLLPPSYNNHQTIYPPGLVHPAASRGPAYTPSMGQVLNVP # MYHDPQLSPQYPIHQITQLAPAHIPMPLSRTQALTSLEASLPASSNASSKVSTPVPVRAQISNAMANPKCCSICARRPPSLTRLAILTPCAHALCPAC # LTSALNIVGEKDMECAGCRAKVADFKLVSITADEGVAEKVEDNSSSPSKAQEPKQLTHDNLLYNGELNENQTFDISDLDETDFFSDENLRASTPPPKV # KGMGRVFESGTVSGVEQAATKYHDPVVLRIDNVPWVSHHVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g137 ### # start gene g138 Scaffold_6 AUGUSTUS gene 613749 614252 0.16 + . g138 Scaffold_6 AUGUSTUS transcript 613749 614252 0.16 + . g138.t1 Scaffold_6 AUGUSTUS start_codon 613749 613751 . + 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_6 AUGUSTUS CDS 613749 613755 0.16 + 0 transcript_id "g138.t1"; gene_id "g138"; Scaffold_6 AUGUSTUS CDS 613858 614252 0.25 + 2 transcript_id "g138.t1"; gene_id "g138"; Scaffold_6 AUGUSTUS stop_codon 614250 614252 . + 0 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [MELFTAQQKSQLAKFSNKEEPARPLSACGSDSDAHSSVRAPDHADPTDADVEDEDGENDPQGDASLSEESHPSSDEVR # TPSSTTAANSSSSSSPEIDSIASAQDHMRDDIAREFGVEAQLVEALIQRLSMTQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g138 ### # start gene g139 Scaffold_6 AUGUSTUS gene 615381 616023 0.57 + . g139 Scaffold_6 AUGUSTUS transcript 615381 616023 0.57 + . g139.t1 Scaffold_6 AUGUSTUS start_codon 615381 615383 . + 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_6 AUGUSTUS CDS 615381 615605 0.6 + 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_6 AUGUSTUS CDS 615670 616023 0.95 + 0 transcript_id "g139.t1"; gene_id "g139"; Scaffold_6 AUGUSTUS stop_codon 616021 616023 . + 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MATTTVPSRSSYRTTLPSSKAMVTFTSFGIYNFDAGSSEIIGTNDPTNREPTHARPKEPQSRQSTLTAAHIQDTQDSK # QHCSNPPAPASQLAKKILARPPSLNGPPGPPIPMKFVVLAPIATEADAEDTSDDSVSDAEVSTSTASLSSSTCRTSGDDNSEMDEPTLRPLTVPPWHM # KSRRPNVCATAATSLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g139 ### # start gene g140 Scaffold_6 AUGUSTUS gene 616364 617221 0.63 - . g140 Scaffold_6 AUGUSTUS transcript 616364 617221 0.63 - . g140.t1 Scaffold_6 AUGUSTUS stop_codon 616364 616366 . - 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_6 AUGUSTUS CDS 616364 617221 0.63 - 0 transcript_id "g140.t1"; gene_id "g140"; Scaffold_6 AUGUSTUS start_codon 617219 617221 . - 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [MTTPTPARIPPIHVPMTPKHLPKNPSSASIYSPYPATTASAPVASSHLPGPFSIARNVVATNGFRGLWLGHTGTVLRE # TGGTAVWFAVKEWVARVLKDRRAKADPSVLPAENNPSTLLPWESAFSGAISGAVCVAALYPADTVKSAMQTEEELREMRTYQKRASSAAREWSTSSSS # LPPISSSPSSASSSPTFPSATASSSGAAPKPSSIIPTSAIRQTISNSKALAGAARVSIESMSFLETFLKIYRTHGAKGLYSGCGMSMARAVPSSGIVF # VVYDGLTAWFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g140 ### # start gene g141 Scaffold_6 AUGUSTUS gene 645879 647092 0.18 + . g141 Scaffold_6 AUGUSTUS transcript 645879 647092 0.18 + . g141.t1 Scaffold_6 AUGUSTUS start_codon 645879 645881 . + 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_6 AUGUSTUS CDS 645879 646410 0.26 + 0 transcript_id "g141.t1"; gene_id "g141"; Scaffold_6 AUGUSTUS CDS 646554 647092 0.65 + 2 transcript_id "g141.t1"; gene_id "g141"; Scaffold_6 AUGUSTUS stop_codon 647090 647092 . + 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [MSTLPFQASMKASHKDFCTRYSDDEDTSYKIRRSATKLLAALIGTRPEMLSTIYKDVSPVLISRFGDREETVKLEVWS # TYGLLLSQTAVYGGLSQSKEDVTRGKRKRDTETMDVEGGPYSLLKSQVPALSKALLNQLKSQKTSSGTLQAGFGLLYSLLNVLPGSLSSQVASITSTS # RPGERHPRVASEAFRVFSALLQAVKPVKNADWTEPLYDQAVARLTTHDTDAEVRGCAEECIGDLWICATDVVRSKNGKEWESICRQTGKVDGAVKVII # KVAKEVNVGDAWVNGCMDWILGLLKKSGRPGKSDIFLALEVLIRRFVALPSSRIIADFGRQLYHWCTFRSSVGSHQPDQTIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g141 ### # start gene g142 Scaffold_6 AUGUSTUS gene 653876 654850 1 + . g142 Scaffold_6 AUGUSTUS transcript 653876 654850 1 + . g142.t1 Scaffold_6 AUGUSTUS start_codon 653876 653878 . + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_6 AUGUSTUS CDS 653876 654850 1 + 0 transcript_id "g142.t1"; gene_id "g142"; Scaffold_6 AUGUSTUS stop_codon 654848 654850 . + 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [MSAVQDSSSDTAQTDGDGPEGSDKPPHEDISNKKNNQPISTTPAVTILTEPHGIPLPPPEAGTYEKQPGYTVEVLKKL # VEASSNSKLSMQAPAQIVAAPSVTAASQPTPAIVTIPITTTKPNANTLHIKQTSMTSNAGTFDTASPTSSPTVSEYDWNTSAPSTRTNSRPPSRAPSM # SSGVAGSKLQMSKSSAVMTPAASAANGVQRSVSTNSAITNTHATPEPASPAVGSRPKPSSIHSTDGEKHRFTLKDLLANGPKLARKSSQRSTGSRSSR # KSDEVKAMEVGTRVEVGQSLLQEIALPACRRNTVSVRKSLSERELPPLYD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g142 ### # start gene g143 Scaffold_6 AUGUSTUS gene 657150 658097 0.84 - . g143 Scaffold_6 AUGUSTUS transcript 657150 658097 0.84 - . g143.t1 Scaffold_6 AUGUSTUS stop_codon 657150 657152 . - 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_6 AUGUSTUS CDS 657150 658097 0.84 - 0 transcript_id "g143.t1"; gene_id "g143"; Scaffold_6 AUGUSTUS start_codon 658095 658097 . - 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MSTSESTFVVRPLNLLPAEINGIPEEVEAQKELIRKKILSVPNRELVKDKETWKLVVEMGSDLSINAFAVNFKLGNVV # NEDIVEANYLNKRIFDALSITDANTDKKPPLILTSTVLAQKSYGECLLKFKDRLGLKGSQDLYTLVNVVMSPWPTASGLTAEIAQSLQETIVKEREVS # VYRNTLTEDYHAFVMQGTDKLYFVHLPMFNMENHRHQLIITGVISAEMRTVYTEEREKNPDTVYLLVNDTPTTLGKILAAKEFDARIEPFDSKGQQPY # VPYVKNVYSFITHGFPSTGPSSKAKSQISRSLFRRSSIASS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g143 ### # start gene g144 Scaffold_6 AUGUSTUS gene 666852 667895 0.72 + . g144 Scaffold_6 AUGUSTUS transcript 666852 667895 0.72 + . g144.t1 Scaffold_6 AUGUSTUS start_codon 666852 666854 . + 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_6 AUGUSTUS CDS 666852 667895 0.72 + 0 transcript_id "g144.t1"; gene_id "g144"; Scaffold_6 AUGUSTUS stop_codon 667893 667895 . + 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [MQGPDESEIVERETIELYDIALLLNYERASSEPRFRNSKLREVATHEFDFRSVMIKTPLWTAHKGPKDGFIFQRIKRA # IPGSDEEPDLPSNILSPQVMSSLARDITQLAPSRLETIYWQARGHDGCFKSVAILQYFLDLYAINPLLRIRLANGREYVTSSSPTSLSIVEYDLLVVK # HLTLAVVLPDNQTYITGSSDQPRFRHAVVSFESHPYNGDNEIILDMASMQFGETGRGPGRKGKSTFVLESVGDYKKRLLTVAGGFEKAKVSSRITPDP # NQANEAWMWKVAKKAKERWEKRGEHHWCGHCGRPLATGPALKRCSRCRQAYYCDEEHQKMAWSSHHKSWCRPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g144 ### # start gene g145 Scaffold_6 AUGUSTUS gene 668940 669783 0.34 - . g145 Scaffold_6 AUGUSTUS transcript 668940 669783 0.34 - . g145.t1 Scaffold_6 AUGUSTUS stop_codon 668940 668942 . - 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_6 AUGUSTUS CDS 668940 669397 0.73 - 2 transcript_id "g145.t1"; gene_id "g145"; Scaffold_6 AUGUSTUS CDS 669510 669783 0.49 - 0 transcript_id "g145.t1"; gene_id "g145"; Scaffold_6 AUGUSTUS start_codon 669781 669783 . - 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MSSYKIFFWTYLGLNTPLILVEILGAAAMTTFAQKTTWEDAYNDNSVGGLLGAGLAGPMGGFGSFLLVLLALSIVANN # IPNMYSLALTFQVWSVVYIVLAIVGASHFEEWLDTLLVILSYWLAIFSTILIEEHLIFRKGKWSNYVPDDFNNWRKLPLGVASFLALGCGVAGAVLGM # AQVWYVGVIGRMIGDPEFGGDIGETPLVYISGREFLMIMIAGFELAFAFTAVTYPPLRYLEKRWWGY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g145 ### # start gene g146 Scaffold_6 AUGUSTUS gene 679002 679898 0.98 + . g146 Scaffold_6 AUGUSTUS transcript 679002 679898 0.98 + . g146.t1 Scaffold_6 AUGUSTUS start_codon 679002 679004 . + 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_6 AUGUSTUS CDS 679002 679898 0.98 + 0 transcript_id "g146.t1"; gene_id "g146"; Scaffold_6 AUGUSTUS stop_codon 679896 679898 . + 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MKSNQSPLAEDHSASPQKSFMNRMSSYESLQRSPIVNKLTQQERLSLFWESLDKDVNADPPKPARVLGIPVSSSESQI # QEPLSQVSRLRRQRSSIITQTNNRLSQLMATHNKLRKLRRPKSTPAFTHPDVIMKSGTKIDEYELPNGIKQIGSGIGFTYTVPAAAKSKSSICTPTSV # PRRSHSIMPSIGVGIGLGLRNFGGGILRTRLRREGHVDADLGHQSQDHHTQFYNPQNTGMNSVHEDVTAEVDAEQQDVFRYGSTWSLLPSEACKCTTL # SPCLDQISPVTATDSTVYSPMSNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g146 ### # start gene g147 Scaffold_6 AUGUSTUS gene 687723 688772 0.89 - . g147 Scaffold_6 AUGUSTUS transcript 687723 688772 0.89 - . g147.t1 Scaffold_6 AUGUSTUS stop_codon 687723 687725 . - 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_6 AUGUSTUS CDS 687723 688772 0.89 - 0 transcript_id "g147.t1"; gene_id "g147"; Scaffold_6 AUGUSTUS start_codon 688770 688772 . - 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MHTPGDVNRPTANFKNDLGREETTSEAPRASVSELPTEPQQPESKEEVHRAASLAPSRHSSSALSSVHSTIVVVPPHC # IFKCGRRFILFVFIPPPSSIHVQPQADVDAAAGQKVDQNEQEHPQGLLVQEEENDALKTEGPATQLLGVAIGDILEQEEETGPIISSSSKSPTEASAV # VSTTKEISIYSAAAIATSSTATASHSMPSIVTQDVVDEGSNANLQSADQGSENSVDIDVGNNKLGDLESVDEDDTSIMDPPIGHAIEVVVHTEKFTIT # DTNTSAANPAMISVDQPQEPRQELETSIPNEFTEVNASGGECAPSFFFNIFLLTYCGRKRALLERFPTTSFSSTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g147 ### # start gene g148 Scaffold_6 AUGUSTUS gene 689341 690081 0.78 - . g148 Scaffold_6 AUGUSTUS transcript 689341 690081 0.78 - . g148.t1 Scaffold_6 AUGUSTUS stop_codon 689341 689343 . - 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_6 AUGUSTUS CDS 689341 690081 0.78 - 0 transcript_id "g148.t1"; gene_id "g148"; Scaffold_6 AUGUSTUS start_codon 690079 690081 . - 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MTRASNSKVENVIGHDEDDHMDSISAGPRRGKRRATSPKSSSGLGSQRTSARTRTLTAKAAAVAAGTKRGRGRPSKNI # AAPSTQDDLSDADAEGDEDEYVEHAEDEEEPIVERRGRGRPRKGTQIHILDEDEDEYVEEVEEESSAERRTRGRSRKAQKNQMQFADRGENEGVEEPA # KRGRGRPRKDQGASASAPVLRTVATSRKSRSPAPISPHASHGPMLLDPYWTLPCEEDELSHCSPSKAHLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g148 ### # start gene g149 Scaffold_6 AUGUSTUS gene 694551 695237 0.96 - . g149 Scaffold_6 AUGUSTUS transcript 694551 695237 0.96 - . g149.t1 Scaffold_6 AUGUSTUS stop_codon 694551 694553 . - 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_6 AUGUSTUS CDS 694551 695237 0.96 - 0 transcript_id "g149.t1"; gene_id "g149"; Scaffold_6 AUGUSTUS start_codon 695235 695237 . - 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MFSRKYPHDLITTTYFKGNTHGIFFDLEFEISCFNPRWGNFNEVMIEPTKTTLGDVIHSLKAVCRKIIDMNFAMTRIE # TPISITNKTESMLKELLEEAVAGAMADLSCLAMNFEENGIVDTEVAQMLLHLDNAKSYLEDIEDIFAQAVVGLEKALNANNRQRSWDVRNDARRVLID # ARIVCRNVRGLWKFVHKEMESGLCGDLKEMSRQFWDVRQTLLDTLINTCREQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g149 ### # start gene g150 Scaffold_6 AUGUSTUS gene 696196 696803 0.08 - . g150 Scaffold_6 AUGUSTUS transcript 696196 696803 0.08 - . g150.t1 Scaffold_6 AUGUSTUS stop_codon 696196 696198 . - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_6 AUGUSTUS CDS 696196 696692 0.51 - 2 transcript_id "g150.t1"; gene_id "g150"; Scaffold_6 AUGUSTUS CDS 696782 696803 0.08 - 0 transcript_id "g150.t1"; gene_id "g150"; Scaffold_6 AUGUSTUS start_codon 696801 696803 . - 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MLYIPVLCSSLTLLPTADGHTPKWTSPYWEAVASKSLQNEDEPQMVHSTKGIERDDPLPLNSTVIFQQNTSSDAGVND # ASIDSPIQDEDENEFNMGIPDLIPSSLNSNPFYGFGIIDDDTTALLDVKQQEYNNLWLGVPTKGIGGGKSANGPHWDGHSATLPSSMDWAMYSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g150 ### # start gene g151 Scaffold_6 AUGUSTUS gene 703209 704125 0.27 - . g151 Scaffold_6 AUGUSTUS transcript 703209 704125 0.27 - . g151.t1 Scaffold_6 AUGUSTUS stop_codon 703209 703211 . - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_6 AUGUSTUS CDS 703209 703366 0.9 - 2 transcript_id "g151.t1"; gene_id "g151"; Scaffold_6 AUGUSTUS CDS 703546 704125 0.28 - 0 transcript_id "g151.t1"; gene_id "g151"; Scaffold_6 AUGUSTUS start_codon 704123 704125 . - 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MYQNPGMSYAPPTNGYTQWASPNGYQVPSSQPQPQPSYVPPPEINNTPTQQSQTQWYAQQPTSPQIQQVQQISSASYP # QTSYQASSPTPVPYVPQAPPSQQYTSSTPVQQYSTLPQQQQQQQPLPLQYAPTPTPPVQSSSYFAPTSPTPVPHTPQASLQQQYSSPTPVQQYSALPQ # QQTTNNMPHLLQYPPNLPPATHPSVTSLAQFPVAPTSAPQAFPLYGPTPSLPSGVAQTEERKEALLIDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g151 ### # start gene g152 Scaffold_6 AUGUSTUS gene 704239 704862 0.9 - . g152 Scaffold_6 AUGUSTUS transcript 704239 704862 0.9 - . g152.t1 Scaffold_6 AUGUSTUS stop_codon 704239 704241 . - 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_6 AUGUSTUS CDS 704239 704862 0.9 - 0 transcript_id "g152.t1"; gene_id "g152"; Scaffold_6 AUGUSTUS start_codon 704860 704862 . - 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [MHSGRHSRARDLADAELQRAIQLSLQEVGVANGHARPGYVPSQPTYQYSEPPIVDRTTHPTITSEEEEDPDLKAAIEA # SLREANAPRPSAPIVVETPRSEYPVYDGPGYSQSYPPGVVPPHPVLPNIPNYDLEPLETDAILTFSQTVEQVQAQGGRDMSRYPAVNELYDKANSLRP # KLAMSVDDTGRKERELFSYFHICVRIIIFFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g152 ### # start gene g153 Scaffold_6 AUGUSTUS gene 708861 711668 0.73 + . g153 Scaffold_6 AUGUSTUS transcript 708861 711668 0.73 + . g153.t1 Scaffold_6 AUGUSTUS start_codon 708861 708863 . + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_6 AUGUSTUS CDS 708861 711668 0.73 + 0 transcript_id "g153.t1"; gene_id "g153"; Scaffold_6 AUGUSTUS stop_codon 711666 711668 . + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [MGIVQDTLCGIRKFTLRDSFLDWNQVQNILLWVPEWDGSVPIPAILKPKPLWTGKQILSLVIPRGINIHRSPDPKSSN # PVFDDGMLIENGEIIFGIVEKKTVGASQGGLVHVVFREKGPEVTRQLFTGLQTVVNYWLFHNGFSIGIGDTIADKNTMSYITETIASRKANVSKIIED # ATHDRLKPAPGMTIRESFESLVERELNLARDTSGQHAQKSLKEDNNVKQMVVAGSKGSFINISQMSVCVGQQSVEGRRIPFGFRHRTLPHFTKDDFSP # ESRGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDVMVCYDGTVRNSLGDLIQFVYGEDGMDGAFIEKQNIDTFSLNDRE # FEHNYRVDVTDPAGGFLPGVLQVGIDDSSLELQNKLDEEYDQLLSDRRLLREFIFPQHATSFNQYLPVNLSRIVQNAAQIFHIDRRKPSDLDPAFIID # SVKTLCDRLVVVRGDGPLSHEAQANATLLFRMHLRATFGCRRVLERFHLNKEAFEWVLGEVEAKFNQSVANPGEMCGTLAAQSIGEPATQMTLNTFHY # AGVSSKNVTLGVPRLKEIINVATNIKTPSLSVYLEPALRFDPNLAKNVQQELAYTSLRTVTAAVEIWYDPDPSSTIIEEDEVFVESFFAIPDEEVESK # LHLQSPWLLRLELDRAKMLDRKLTMAYVASRIAESFKTDLFVIWSEDNAEKLVIRCRVLGGADKDEDGTETLEEDIFLRQLENTMLNSVSLRGVQGIN # RVFLTRHDLVETKDDGSIVAEKDKQWVLETDGVNLKTVMCIDGVDFTRTYSNSCVEVFNVLGIEAARAAILKELRGVIEFDGSYVNYRHLALLCDLMT # HRGSLMAITRHGINRADTGALMRCSFEETVEILMEAAAVGERMIAMVLLRMSCLDKWHLWALVHSMWHSILTC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g153 ### # start gene g154 Scaffold_6 AUGUSTUS gene 711707 712279 0.62 + . g154 Scaffold_6 AUGUSTUS transcript 711707 712279 0.62 + . g154.t1 Scaffold_6 AUGUSTUS start_codon 711707 711709 . + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_6 AUGUSTUS CDS 711707 712279 0.62 + 0 transcript_id "g154.t1"; gene_id "g154"; Scaffold_6 AUGUSTUS stop_codon 712277 712279 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [MLAAQVDGGMTPGQVAMTPYDTNSPMWDNHLFKGSDQAAFSPLAVNSNEESGNFNYLPWGQSPRGAGGMSPGGPGYSP # SSPNAYSPNSPAFAPTSPFGGGATSPMVYGGTSPYYDPGRGVTSPTYSPTSPAFNPTSPAFSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSP # TSPSFSPASPRCKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g154 ### # start gene g155 Scaffold_6 AUGUSTUS gene 723413 724658 0.42 + . g155 Scaffold_6 AUGUSTUS transcript 723413 724658 0.42 + . g155.t1 Scaffold_6 AUGUSTUS start_codon 723413 723415 . + 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_6 AUGUSTUS CDS 723413 724078 0.51 + 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_6 AUGUSTUS CDS 724152 724658 0.78 + 0 transcript_id "g155.t1"; gene_id "g155"; Scaffold_6 AUGUSTUS stop_codon 724656 724658 . + 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MERKELRILVGTNLVRLSQLDGVDLDMYQQLILPSILEQVVNCKDVIAQEYLMEVVIQVFTDEFHLFSLGPFLSATAQ # LHPKVNIKAIVIALIDRLAAYAAREAESEDPEETKRQEEAAARRLAERVRIQKAKARESTLSLTSTTDAPDASAWESTASFTATVESETPTVVENHGV # EETSSDVTHEVKGKDKEGSPSRKFRGVPENVQLFEVFWKQVVELIKDITALFVSLTNLSLSCYPDRLEYVDQILAYAAEKIKEFNDNPDLHAQQTSAN # LAALLVAPINSYQSVLTLLAIPNYAPLLSRQLFSTRRSIAHSIISSVLKNETIVETPEDVDGVLELCHVLIKDQSDSASNPANSTGTAVRRQGPPHFI # EREEMAGTRLGGKDGTFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g155 ### # start gene g156 Scaffold_6 AUGUSTUS gene 724893 725453 0.78 + . g156 Scaffold_6 AUGUSTUS transcript 724893 725453 0.78 + . g156.t1 Scaffold_6 AUGUSTUS start_codon 724893 724895 . + 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_6 AUGUSTUS CDS 724893 725453 0.78 + 0 transcript_id "g156.t1"; gene_id "g156"; Scaffold_6 AUGUSTUS stop_codon 725451 725453 . + 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [MPILPLGNDWQTKVSTILKFVRQLSSILANQVEAPSIALRLFLLAAQISDECGFEDLTYDFYVQAFSVYEDSISESRA # QLQAITLIIGTLHGAKVFGVDNYDTLITKAALHGAKLLKKSHQATAVGLASHLWWQEAPPPTDSEESQPTAKEPKDDDSENSVKAVSLLGCREAVNVR # LISVSVSTPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g156 ### # start gene g157 Scaffold_6 AUGUSTUS gene 728195 728938 1 + . g157 Scaffold_6 AUGUSTUS transcript 728195 728938 1 + . g157.t1 Scaffold_6 AUGUSTUS start_codon 728195 728197 . + 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_6 AUGUSTUS CDS 728195 728938 1 + 0 transcript_id "g157.t1"; gene_id "g157"; Scaffold_6 AUGUSTUS stop_codon 728936 728938 . + 0 transcript_id "g157.t1"; gene_id "g157"; # protein sequence = [MEYDSSLAESAYKLAERWDSSRSVEISKLAFQANDLDAFSSTQKGMPPKLWTDCIRKADKVTGVVFLERLQSYKPLPS # SHIEHLASLYKVSSTHNAEIRLRFYQFSLVDPSSPAAQKYAAEAADWVIGGGSGMVVGRMKFCRDVFRAVFKVNKDLAVNAFQKEKNSFHPIARKLIE # KVNRVLASLSRFELAVTMSLHRTSNFQADIRWLFIGKHALENVVIVYIRQIMSLVYYRGHIGIMRRRATVY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g157 ### # start gene g158 Scaffold_6 AUGUSTUS gene 738023 739442 0.26 + . g158 Scaffold_6 AUGUSTUS transcript 738023 739442 0.26 + . g158.t1 Scaffold_6 AUGUSTUS start_codon 738023 738025 . + 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_6 AUGUSTUS CDS 738023 738693 0.27 + 0 transcript_id "g158.t1"; gene_id "g158"; Scaffold_6 AUGUSTUS CDS 738860 739442 0.64 + 1 transcript_id "g158.t1"; gene_id "g158"; Scaffold_6 AUGUSTUS stop_codon 739440 739442 . + 0 transcript_id "g158.t1"; gene_id "g158"; # protein sequence = [MKLFKDRLPDSLPRPFDIPRAPHDSFSSSPQILLYKSLAWSTALNPRRLENDWIPAWEHTVQRLLDPLSRSGHTFIPA # GQRYLWYQDDVEEVKQEAKMRNKQLTREKQIEAEEEEHEEEMSGATGSVEEDIDEAYNPLAEVSFESHHTQAATRSVGRLVTLHEGIPEITVLETSFT # QLKYPEHTTDDDASDAGSEVVTKEVEMWDLDELTDSEEVEEYDPQGFRLVRHRFDTQMAWASFLDGLSAAHELAIEDLSVYAIILFKRYADVQEFLAI # AGAGPFWRWAIIHRQDIPWKDPGQNPRNRWIHQQEAARFASLFTNDYFELGTTRSDDELQKLIEVFFEPKESKFADDRAEEAKIRFEKVTKWREAHIQ # GGDWYWLPRTERKVKRKEYDQELRERQERISKKAGKNTDEIVHVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g158 ### # start gene g159 Scaffold_6 AUGUSTUS gene 739877 741445 0.98 - . g159 Scaffold_6 AUGUSTUS transcript 739877 741445 0.98 - . g159.t1 Scaffold_6 AUGUSTUS stop_codon 739877 739879 . - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_6 AUGUSTUS CDS 739877 741445 0.98 - 0 transcript_id "g159.t1"; gene_id "g159"; Scaffold_6 AUGUSTUS start_codon 741443 741445 . - 0 transcript_id "g159.t1"; gene_id "g159"; # protein sequence = [MSSAYHPQSDGATERANRTVTQMLRQCVSSTQKDWVSKLPAIEFAINCARSESTGFAPFLLNNGRMPRAMVWNSDLSN # EYPSVKVFARLRRLAIMAAHDSILEARVKQTRAANRKRRYDPFQQDDLVYVSTKNLTFEKGLARKLIPKYIGPYRIMKDFGNHSFAVALPTDFTRRGV # HPVFHSSLLRIHVPNDDRRFPGRLDTQLQESPNALPQWRIEKIVSHFGQKQHAIFQVQWSTGDYTWMSFAEISAMPCLNEYFELMGVQSIEQLPTGTG # TAPEQVKIEFGIASISFSEELESENFVSESYKFSTDGFSSQSSPFPSLLQNCPLTLPNMNSAGDDQQTIQRISNSVFSISADRLGDDDIHISAQHVRL # FCLYDREIRVRKQEMNWHPAGYNNFAGVYNETHPGPERFALFDPDYEGAGATPILNLDTASPLLSSFGVEPHECFSHEDLTPPGYVTLAVAEHERLLD # ISTRFSASMVNGRKRAEDRKLRKKNAMAAEEERKKGGFHYVDTKHLSGGLHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g159 ### # start gene g160 Scaffold_6 AUGUSTUS gene 743510 746619 0.42 - . g160 Scaffold_6 AUGUSTUS transcript 743510 746619 0.42 - . g160.t1 Scaffold_6 AUGUSTUS stop_codon 743510 743512 . - 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_6 AUGUSTUS CDS 743510 745570 0.76 - 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_6 AUGUSTUS CDS 745630 746619 0.42 - 0 transcript_id "g160.t1"; gene_id "g160"; Scaffold_6 AUGUSTUS start_codon 746617 746619 . - 0 transcript_id "g160.t1"; gene_id "g160"; # protein sequence = [MQFPLRDENSEMLAQLAEITEPVHELTLNMMAFGSFTNELSVVLGSDYLSESEIITDSPIIGDEPPLIPPYHSVDEDS # SLLLRTDSDLLEFFEDGVGDGMPALEPVSDSESDDDDDDVLQQQSDTELESEDEGQVESDSETLVSNYNTSIRDDRHTWIDGNLGLWNAPETFLVQRP # LVNETRDVLFTVNESGQNEFSYADVAKDIFGYPNTTWSDFFLHKTIDHGWWPASIDNWMCLAMSFLLNHDAPYPADELWWGAEDSYRFHVNELDDNTY # GIEDDNSDYGELTISRTLVMDPSFQLSAWYAQQRAERLGHLFDHEHWRHRSKPIGDSIPCDNRSIPVFEISKKSTPDGVVYQFKDKEARIWSKPLPIS # ILRNTRFNLVGWWKKHLTKYLCEQEQRFEKARISHERKVAQANKRRIWNHQKQGEILALAIEEQLELAQPFPGDSELLEQRFSRFSTWTTLDGRIGVL # DHIRQIKIHIQMNNAANPHFRPGELWNQVCARISGLPAFEDMDYQHLGNILSIKARNSLARHIPFIPEVMNPGYSSRDNYSVYRDPENPSQYVIVDDG # RNFKTQVSAMLLMTPQFNLPAWYNKRLEKARNDLMRRLRGPVEFEFLPRLFGEPENDFDHQLDRYVDQSDNYLHLLFGNLEWEERNGLVHVTSLANAY # IEPKTYPGLQRNAGVVKDIGRIVPRPIVIVVQIDGRPVRALVDSGSLGDFMSTHLSDQLRVSKKYHKNPLSLHLAIQGSRSKIHCGTTVNLKYATIDA # NHYFDIANISNYDLILGTPWIFQYKVRIGLNPSTVEVGCDQPQPIAGDNVSEVISQAMSIAEETLETIREQLREYARPICKTAAETPLPPLRRINHTI # PLIDENKIYPWRPSRCPEAFRPQWDQKRNDYVSSGRWVVTNSRNTVPMMLILKSGKQKDSLRVVFDLRARNANTYKMASPLPNIDGILRRVARCPYRS # IIDGKDAYEQIRIIPEHVSRSTVTTPDGNMDSKVIQQGDCNGGATFQTVMNDIFRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g160 ### # start gene g161 Scaffold_6 AUGUSTUS gene 746796 748553 0.68 - . g161 Scaffold_6 AUGUSTUS transcript 746796 748553 0.68 - . g161.t1 Scaffold_6 AUGUSTUS stop_codon 746796 746798 . - 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_6 AUGUSTUS CDS 746796 748553 0.68 - 0 transcript_id "g161.t1"; gene_id "g161"; Scaffold_6 AUGUSTUS start_codon 748551 748553 . - 0 transcript_id "g161.t1"; gene_id "g161"; # protein sequence = [MPENEKNDDGGGPWTLVQPRRSRSLDNLKQIKVQKDLFLYTKLSKEQEAAVRAAENQLTATQLEQIRKRDMIVQQQQP # KSPGTGTLSYVAKGKFTDHNEEISDDELNTEKQKAALNKWNVIRNEQSKSGESQIEHTSDQESHRGRKKINGSKRARERKAKKARFDAQSSDETSSSE # EQTSSKLEKSKSSKEKLDETSKPMSTRYAKKLKDMVKGRTPTPSHSGNQFSIQPVDQLPPNSLLAKVLNQNKIVSKSKGVKHTELSSDSNDSSSAEES # TTSESDSTDLSEDSSSSESTDSSKSSYRKHKRSHHSIKNKSKKYNKKKKSYQLKRIIKPVPPVRYDGSEDSEKFERFGLESAQFCKEGQVPKDEQVFL # VSHYLEGKAHTFFVQKVAKNHSKWSLSEFLEGLFNFCFSANFRSQQRDKLRRCHQNGRTVSEYVYELENLMNHVGVLGKREKVIKLWDGFSQGYRYEL # RRAKLSKEVHSWKRIVCEAEAIEMADFENDLGSRFKPRKPEIAVQIMTISINEIRMAVFDNGIITVQLTKILGTVLVPPKLPHRIPQNQSQWSTQDVR # DMRTPLTIIHINVEMKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g161 ### # start gene g162 Scaffold_6 AUGUSTUS gene 749549 750766 1 + . g162 Scaffold_6 AUGUSTUS transcript 749549 750766 1 + . g162.t1 Scaffold_6 AUGUSTUS start_codon 749549 749551 . + 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_6 AUGUSTUS CDS 749549 750766 1 + 0 transcript_id "g162.t1"; gene_id "g162"; Scaffold_6 AUGUSTUS stop_codon 750764 750766 . + 0 transcript_id "g162.t1"; gene_id "g162"; # protein sequence = [MSFGNSPNIPRLPDEKQLVSEESWRPYKREILFAVQSKGLTGYIDGTIPKPNAYPGPIYLSTLPPTPLFSPTPCLEEW # EARDRLVAGAITSNITDPVGLGVDETKRAHEIWQALIKRFEKRDKQRIHLADTNLRNEKFDPPEVTMEDHERKMRNLLKKVHDLGGTATDAQFRWIVI # SSMPQEWRQDVRSVPGTSSADAFAYLHTLWYEKEEEWREEERDTKHVKALMAAHSHTSAMTNRTNLPPAGSKAAVICHNCSKPGHIARKCWAKGGGME # GQWPKQNSSSNTKTNANATMAKPDNADVSSPMATYVMSAKTNYEPSRSESVQKTKLTADLANRQDNPILGDMGQREAREWDVDSNLTSYTPIPKGDCT # VCHGNTHLYSTPVPTIRTFIDSLSIAGCKNLIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g162 ### # start gene g163 Scaffold_6 AUGUSTUS gene 753576 755231 0.14 + . g163 Scaffold_6 AUGUSTUS transcript 753576 755231 0.14 + . g163.t1 Scaffold_6 AUGUSTUS start_codon 753576 753578 . + 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_6 AUGUSTUS CDS 753576 753877 0.41 + 0 transcript_id "g163.t1"; gene_id "g163"; Scaffold_6 AUGUSTUS CDS 754469 755231 0.96 + 1 transcript_id "g163.t1"; gene_id "g163"; Scaffold_6 AUGUSTUS stop_codon 755229 755231 . + 0 transcript_id "g163.t1"; gene_id "g163"; # protein sequence = [MGGAGTDGAKGKSSDIQFTQKSTATDSAKDSAAQDKPSSYDEVHSSHPLRDAAIPHTVLIANASKAVVGTVGSILVAH # KGQTTGVGFPGGTTPPVLLMQMSANEHQKTKTSSRCISKDVESLKPISSRFAKKIKDIAKGHETMPNSTTYHSRHLSTQPVDQLPQDSLLTRMIKTKK # RSKKSIKNHKSSSDSDADSESLDSESCSESLDSESCSESTSSNSSLSSSSSELDSSDESVQHRKQHRHRSRSHSQKRGGRKSKKRTYNRIIKPVSPSI # WNGEADAEVFQRIVLEGYEFCKEGKIPKNEWVFLISHYLSGKAYQFFALKVAKNHSKWSLQEFYEGLFNYCFPVNHREQM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g163 ### # start gene g164 Scaffold_6 AUGUSTUS gene 755980 756363 0.49 + . g164 Scaffold_6 AUGUSTUS transcript 755980 756363 0.49 + . g164.t1 Scaffold_6 AUGUSTUS start_codon 755980 755982 . + 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_6 AUGUSTUS CDS 755980 756363 0.49 + 0 transcript_id "g164.t1"; gene_id "g164"; Scaffold_6 AUGUSTUS stop_codon 756361 756363 . + 0 transcript_id "g164.t1"; gene_id "g164"; # protein sequence = [MHFTSFVDDVSEDSAFEYMSENNNSLTPISNADLVLEDGLLPLPSNLSCSEIPDDDHDSLPDLESMSDSDVEADNIPD # LQDVSDSEYDDDDMFDSLSTFKTDLLESDLSPRNHSRLIISSTATYHAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g164 ### # start gene g165 Scaffold_6 AUGUSTUS gene 758047 758376 0.43 - . g165 Scaffold_6 AUGUSTUS transcript 758047 758376 0.43 - . g165.t1 Scaffold_6 AUGUSTUS stop_codon 758047 758049 . - 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_6 AUGUSTUS CDS 758047 758376 0.43 - 0 transcript_id "g165.t1"; gene_id "g165"; Scaffold_6 AUGUSTUS start_codon 758374 758376 . - 0 transcript_id "g165.t1"; gene_id "g165"; # protein sequence = [MSDTSANHPPAVVKPKRGCKPKNKPRTEEENNALAKLMNDWEAMKGMNVSQNELASLSPNLVSQAARDVENARLNAEL # VALHAYRSTVLSETRIGQQTISPMPVEGTSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g165 ### # start gene g166 Scaffold_6 AUGUSTUS gene 759839 761164 0.69 + . g166 Scaffold_6 AUGUSTUS transcript 759839 761164 0.69 + . g166.t1 Scaffold_6 AUGUSTUS start_codon 759839 759841 . + 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_6 AUGUSTUS CDS 759839 760261 0.69 + 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_6 AUGUSTUS CDS 760337 761164 0.69 + 0 transcript_id "g166.t1"; gene_id "g166"; Scaffold_6 AUGUSTUS stop_codon 761162 761164 . + 0 transcript_id "g166.t1"; gene_id "g166"; # protein sequence = [MSDTEPENQHNSDPETHMADDIVSMPLRSKSERVAKNLNKSGIDGGQSSLQIEDVSNFSALDIHDQCTHMEKLIPANW # IPPEDSETDQEDRDGADDIPFPLEDKNLFDDDLEEDNFWDFRKFDWEQYREYRNDSWLPALQQQLQKTSFQSMTSPFAALSHISFSHILQMEISENFL # THSPWRLLYHLLTKSVPVLHSSPALSLKSTTAVSILVSVIPDHMNLAKHVHSVMNHVINSNKKAQKRFIYIPVIPRLKAFAMNPEVAKNMQYLNNFTN # GSSEVRTTKDVFDGEDYKFLRKQNVVVGSCTYTYHRDIALGLSTDGFGPFKRRKHTCWPLILFNYNLPPEIQFHMENILAVGVIPGPKKPKDADSFMW # PLVREMLQLALGITTFDVLLKKIFTLRAYLILVFGDIPAVTMIM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g166 ### # start gene g167 Scaffold_6 AUGUSTUS gene 772545 773603 0.74 - . g167 Scaffold_6 AUGUSTUS transcript 772545 773603 0.74 - . g167.t1 Scaffold_6 AUGUSTUS stop_codon 772545 772547 . - 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_6 AUGUSTUS CDS 772545 773603 0.74 - 0 transcript_id "g167.t1"; gene_id "g167"; Scaffold_6 AUGUSTUS start_codon 773601 773603 . - 0 transcript_id "g167.t1"; gene_id "g167"; # protein sequence = [MWSTSGRSWNDYGQHLHAKPEKCAFHVDTVEYLGVIISPLGVSMDPEKVKAVMDWPKPRTVKELQAFLGFANFYRRFI # DNYSGITKVFTKLLRKDSVWNWTPQCSSAFELLKSAFSEAPVLGHYNPDLPVVLECDASDLAIAGILSQLDPETGEIHPIAFHARSMISAELNYDIYD # KELLAIVDCFKQWRAYCEGSRHQIQVYSDHNNLQYFTTTKQLTARQARWAELLSGYDFVINYRPGRLGAKPDALTRRSDVYPKKGASRDQVLAGRERV # LIPPERLNATILMNEDLLVNRVREAPKDTTIIEALRIARNEEESLVWEDGLIKRGGRIYVPDVGTYEGRSYSRTTTIN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g167 ### # start gene g168 Scaffold_6 AUGUSTUS gene 774955 775434 0.52 - . g168 Scaffold_6 AUGUSTUS transcript 774955 775434 0.52 - . g168.t1 Scaffold_6 AUGUSTUS stop_codon 774955 774957 . - 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_6 AUGUSTUS CDS 774955 775434 0.52 - 0 transcript_id "g168.t1"; gene_id "g168"; Scaffold_6 AUGUSTUS start_codon 775432 775434 . - 0 transcript_id "g168.t1"; gene_id "g168"; # protein sequence = [MRHPENLVDLTNSIPLELFDGKPTSAGLITQTYTDQISFADGTIHKVEFLVTRLHPTAPIVLGLPWLRMHNPVIDWKE # LCLTFQDRNVRISAALASEIVQPGAEGGTEELGRGVNGEEIHAGTLQSPPEAPQQPPEAPQPPPEVPQQTPKLPLELQGRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g168 ### # start gene g169 Scaffold_6 AUGUSTUS gene 780969 781313 0.51 + . g169 Scaffold_6 AUGUSTUS transcript 780969 781313 0.51 + . g169.t1 Scaffold_6 AUGUSTUS start_codon 780969 780971 . + 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_6 AUGUSTUS CDS 780969 781313 0.51 + 0 transcript_id "g169.t1"; gene_id "g169"; Scaffold_6 AUGUSTUS stop_codon 781311 781313 . + 0 transcript_id "g169.t1"; gene_id "g169"; # protein sequence = [MIKTLWSAPHDPGANNNHDDLDDDSGSLLHGEPGGPGGPCSPISPDIPNKQHAMLELPSGFKGSIETLGTILAALGRP # SDSSESKSKVKEPEVFDGSDPPKAQDVLRQSCPGLQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g169 ### # start gene g170 Scaffold_6 AUGUSTUS gene 781495 782112 0.61 + . g170 Scaffold_6 AUGUSTUS transcript 781495 782112 0.61 + . g170.t1 Scaffold_6 AUGUSTUS start_codon 781495 781497 . + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_6 AUGUSTUS CDS 781495 782112 0.61 + 0 transcript_id "g170.t1"; gene_id "g170"; Scaffold_6 AUGUSTUS stop_codon 782110 782112 . + 0 transcript_id "g170.t1"; gene_id "g170"; # protein sequence = [MQGEAKDSLSNLKTSGNNNIRFNTLAASTRTGILPALKWAYGRGLAEHIKDEMAHLPEPATLADYRQEVLHIDNRYLK # HEETRKHEAGKPFIARKPKKGSSDFKAGSTNQQNNSQPSGSLAPFMPKPKPFSGGKPNNSGKPQNSLNSGQSGGQLPMFNHLRADGKVLPSERERRMK # NNLCLFCGGKHQIADCNKQKGPRIEELCC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g170 ### # start gene g171 Scaffold_6 AUGUSTUS gene 784530 784913 1 + . g171 Scaffold_6 AUGUSTUS transcript 784530 784913 1 + . g171.t1 Scaffold_6 AUGUSTUS start_codon 784530 784532 . + 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_6 AUGUSTUS CDS 784530 784913 1 + 0 transcript_id "g171.t1"; gene_id "g171"; Scaffold_6 AUGUSTUS stop_codon 784911 784913 . + 0 transcript_id "g171.t1"; gene_id "g171"; # protein sequence = [MVEATESIFEHGGITSDEAKVELALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQLVHQ # FNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLALILPK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g171 ### # start gene g172 Scaffold_6 AUGUSTUS gene 787569 788339 0.96 + . g172 Scaffold_6 AUGUSTUS transcript 787569 788339 0.96 + . g172.t1 Scaffold_6 AUGUSTUS start_codon 787569 787571 . + 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_6 AUGUSTUS CDS 787569 788339 0.96 + 0 transcript_id "g172.t1"; gene_id "g172"; Scaffold_6 AUGUSTUS stop_codon 788337 788339 . + 0 transcript_id "g172.t1"; gene_id "g172"; # protein sequence = [MLDEQDAADADQQELQEFLALQQGEAVVAAKRKRDRSPMPMAGPSIKRVQQDASKKRSRRRSPEEEVVQEAPLRVRLV # VPPGRSVAASTSTPLPPRASPSLMEVSGGDLPVQGHSNLVRLAAVAEAQSGSVQRPVVPPSIKDAGPDLLSSNMPPASRPTLVPRALAAHPYRAENQC # LAARVRLLESQLADSQRENSSLTSALRDTSHALESRQREVEQLRSSRHEVLEHETEYQRVLDQFVALDGALPGTPGQVST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g172 ### # start gene g173 Scaffold_6 AUGUSTUS gene 795528 796448 0.8 - . g173 Scaffold_6 AUGUSTUS transcript 795528 796448 0.8 - . g173.t1 Scaffold_6 AUGUSTUS stop_codon 795528 795530 . - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_6 AUGUSTUS CDS 795528 796448 0.8 - 0 transcript_id "g173.t1"; gene_id "g173"; Scaffold_6 AUGUSTUS start_codon 796446 796448 . - 0 transcript_id "g173.t1"; gene_id "g173"; # protein sequence = [MDTVEYLGYILSPDGLTMSKEKVQTVLEWPVPRKVKDIQSFLGFANFYRRFIYNYSDIVVPMTRLTRKGASWIWDSSC # QEAFENLKTAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVV # TDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPVLRASII # MDIEALHQAIILALPADPSSVAGLELAKRSFQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g173 ### # start gene g174 Scaffold_6 AUGUSTUS gene 798359 799830 0.33 - . g174 Scaffold_6 AUGUSTUS transcript 798359 799830 0.33 - . g174.t1 Scaffold_6 AUGUSTUS stop_codon 798359 798361 . - 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_6 AUGUSTUS CDS 798359 799705 0.47 - 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_6 AUGUSTUS CDS 799819 799830 0.35 - 0 transcript_id "g174.t1"; gene_id "g174"; Scaffold_6 AUGUSTUS start_codon 799828 799830 . - 0 transcript_id "g174.t1"; gene_id "g174"; # protein sequence = [MILTPNHLPHSPTLSLQSVNHVAVIAVSVQLQSLLRRLFLKPWKRKQQFXYSTLYTGDGQPVQVLTPRRGQPPVVAPA # RGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNNDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGP # GGPGGPGGPRSPISPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNY # TLSYLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAE # RIKDEMARLPEPATLANYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSSNQHNNSQPSGSSAPFHAEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g174 ### # start gene g175 Scaffold_6 AUGUSTUS gene 801292 802632 0.72 - . g175 Scaffold_6 AUGUSTUS transcript 801292 802632 0.72 - . g175.t1 Scaffold_6 AUGUSTUS stop_codon 801292 801294 . - 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_6 AUGUSTUS CDS 801292 802632 0.72 - 0 transcript_id "g175.t1"; gene_id "g175"; Scaffold_6 AUGUSTUS start_codon 802630 802632 . - 0 transcript_id "g175.t1"; gene_id "g175"; # protein sequence = [MGWSTTEVEYTYQQTTTYALRYSVNAMTIQLQDTPDYTGHSTWSVPISGGLRCALLWKNTLRDARFVPVRRSRRHPRA # VTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRSLLARLGIK # SDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRILREARQDA # GAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWKGNSINGEI # PTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSRAPKIVRAFHKKHPTAAKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g175 ### # start gene g176 Scaffold_6 AUGUSTUS gene 802870 806139 0.09 - . g176 Scaffold_6 AUGUSTUS transcript 802870 806139 0.09 - . g176.t1 Scaffold_6 AUGUSTUS stop_codon 802870 802872 . - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_6 AUGUSTUS CDS 802870 804752 0.15 - 2 transcript_id "g176.t1"; gene_id "g176"; Scaffold_6 AUGUSTUS CDS 805488 806139 0.28 - 0 transcript_id "g176.t1"; gene_id "g176"; Scaffold_6 AUGUSTUS start_codon 806137 806139 . - 0 transcript_id "g176.t1"; gene_id "g176"; # protein sequence = [MEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVKLIKSALGFFTESAGDWATPHLLHFNAENPP # FGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRERFFTALLPEIRQHLITVNIAQGIAPTLKEAIKRAI # SVDVYLHDPTMTGRNSGYPPMHTAHTTSADPHAMDIDATHTTGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVK # PPRVTIEEVPDEEILYSHLAATHTETPILELPELEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTY # SQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFSESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSP # VFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPLVADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALM # NAIFADLIAAGKVAVYLDDILIFSNDLEEHRRMVREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFL # GFANFYRRFIRNFAKIARPLNDLTKKDTSFTWTNTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQP # AERNYEIYDREMLAIIEALKDWRNFLEGLPQPFDIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRRKHPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g176 ### # start gene g177 Scaffold_6 AUGUSTUS gene 807209 809014 0.35 - . g177 Scaffold_6 AUGUSTUS transcript 807209 809014 0.35 - . g177.t1 Scaffold_6 AUGUSTUS stop_codon 807209 807211 . - 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_6 AUGUSTUS CDS 807209 808569 0.38 - 2 transcript_id "g177.t1"; gene_id "g177"; Scaffold_6 AUGUSTUS CDS 808711 809014 0.42 - 0 transcript_id "g177.t1"; gene_id "g177"; Scaffold_6 AUGUSTUS start_codon 809012 809014 . - 0 transcript_id "g177.t1"; gene_id "g177"; # protein sequence = [MYLVTRKLNKWRKNWDGIVLNPILQNMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNKIV # QMEKNKYSNEGAGSVHENFKIQCSPQPPPEVPQQTPEAPLRAPRTRVKLEEVKDEEYEASQPGPHKLFPSDKDLGPDDPILMGINEWLAFASESTEEE # VEEILEAGRSAMEKVTPKPTKDSEEAYQKWKSRDTERSSSWPGAKQKVRWRKKRREHGPYPDLPTLDIESLNIPKIPSRSGLTPKGSIRRNNFRRKQL # IAGTHVVERKSDPTIQGKPISLIGAAGMDRLLREGTPAYFLXHISPTKEGSPTEEILRASGSNDPERVQQPKDPENGNPGLEQGGVVKELDEEVSKRQ # ETEELKKSIPVQYQDYLDVFSPGEARTLPPHRPYDIKIETEGDAIPPIGKLYNMSEKELKSLKEYIDEMLGKGFIRSYSSPAGAPVLFAKKKDGTLRL # CVDYRALNKITKKNRYPLPLIGTLVDQLRKAKIFTKIDLRAGYNNVRVAQGHEWKTAFRTRYGSFEYLVMPFGLTNAPSRFNSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g177 ### # start gene g178 Scaffold_6 AUGUSTUS gene 809838 811746 0.33 - . g178 Scaffold_6 AUGUSTUS transcript 809838 811746 0.33 - . g178.t1 Scaffold_6 AUGUSTUS stop_codon 809838 809840 . - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_6 AUGUSTUS CDS 809838 810730 0.58 - 2 transcript_id "g178.t1"; gene_id "g178"; Scaffold_6 AUGUSTUS CDS 811731 811746 0.5 - 0 transcript_id "g178.t1"; gene_id "g178"; Scaffold_6 AUGUSTUS start_codon 811744 811746 . - 0 transcript_id "g178.t1"; gene_id "g178"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDLEEDRIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g178 ### # start gene g179 Scaffold_6 AUGUSTUS gene 812457 813308 0.89 - . g179 Scaffold_6 AUGUSTUS transcript 812457 813308 0.89 - . g179.t1 Scaffold_6 AUGUSTUS stop_codon 812457 812459 . - 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_6 AUGUSTUS CDS 812457 813308 0.89 - 0 transcript_id "g179.t1"; gene_id "g179"; Scaffold_6 AUGUSTUS start_codon 813306 813308 . - 0 transcript_id "g179.t1"; gene_id "g179"; # protein sequence = [MCTQKIQRHPQAVTQPLDVPLGLWEEVGVDLITQLPNSQGYNAVLVCTDLYGKQIHALPCTSSITAEGVADIYYREIF # RLHGLPHFKSDHGPQFAAKLMRSLLARLGIKLDLTSGYRPQSNGQTERANQEVKKYIQLYVGRQQDDWAEHLPMAEFIINLRTYSALGMSPFELTYGY # FPLFNIPVGQCSRIPAVDDRIQILREARQDAGAALHLGKKQQKEGYKQGKWKAHQLKVGNFVWLSAEDINLQLSSEKLGDWQLGPYRILEKIGPLDYH # LDLPISLDR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g179 ### # start gene g180 Scaffold_6 AUGUSTUS gene 816854 817300 0.23 - . g180 Scaffold_6 AUGUSTUS transcript 816854 817300 0.23 - . g180.t1 Scaffold_6 AUGUSTUS stop_codon 816854 816856 . - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_6 AUGUSTUS CDS 816854 817300 0.23 - 0 transcript_id "g180.t1"; gene_id "g180"; Scaffold_6 AUGUSTUS start_codon 817298 817300 . - 0 transcript_id "g180.t1"; gene_id "g180"; # protein sequence = [MFLKEFSQQFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDQTEMSDIDLRECFFTALLPEIQQHLITINIAQ # GIAPTLKEAIKWAILVDVYLHDPTMTGQNTGHTPAHTAHITPADPHAMDIDATHTSPGNSREAFLAHMRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g180 ### # start gene g181 Scaffold_6 AUGUSTUS gene 818332 818715 0.25 - . g181 Scaffold_6 AUGUSTUS transcript 818332 818715 0.25 - . g181.t1 Scaffold_6 AUGUSTUS stop_codon 818332 818334 . - 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_6 AUGUSTUS CDS 818332 818715 0.25 - 0 transcript_id "g181.t1"; gene_id "g181"; Scaffold_6 AUGUSTUS start_codon 818713 818715 . - 0 transcript_id "g181.t1"; gene_id "g181"; # protein sequence = [MSTPAPPAPPTSAEDLMTQLIRQVANLATAMEEYSSSKSSMNKPKVFKGKDGTEAYRFMAQCHALATTRPVPVTTTRC # HTSYPPPVVLRTSPKYHQTPPQVFLTPLPKRPSPRHAYESPLADNPFKY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g181 ### # start gene g182 Scaffold_6 AUGUSTUS gene 823421 826739 0.12 + . g182 Scaffold_6 AUGUSTUS transcript 823421 826739 0.12 + . g182.t1 Scaffold_6 AUGUSTUS start_codon 823421 823423 . + 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_6 AUGUSTUS CDS 823421 823955 0.31 + 0 transcript_id "g182.t1"; gene_id "g182"; Scaffold_6 AUGUSTUS CDS 824769 825095 0.41 + 2 transcript_id "g182.t1"; gene_id "g182"; Scaffold_6 AUGUSTUS CDS 825937 826739 0.99 + 2 transcript_id "g182.t1"; gene_id "g182"; Scaffold_6 AUGUSTUS stop_codon 826737 826739 . + 0 transcript_id "g182.t1"; gene_id "g182"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRSTTRIDSPILQAIARRTGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNNDDLDDDSGGLPRGEPG # DPTFWLFGAVHAEPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAFNHLGADGKVLPSERERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETP # EATIEVVEEDRKTKVAARAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYPLSEKELVALKDFIDKQLA # TGAITPSSSPHGAPVLFVPKKDGKLRLCVDFRGLNRITKKDRYPLPLISDLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMP # FGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHREHVKEFFGGYGNIGFTPTPRSANSIWILLSIWVIFFLPTD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g182 ### # start gene g183 Scaffold_6 AUGUSTUS gene 842808 844287 0.77 + . g183 Scaffold_6 AUGUSTUS transcript 842808 844287 0.77 + . g183.t1 Scaffold_6 AUGUSTUS start_codon 842808 842810 . + 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_6 AUGUSTUS CDS 842808 842838 0.77 + 0 transcript_id "g183.t1"; gene_id "g183"; Scaffold_6 AUGUSTUS CDS 843446 844287 0.88 + 2 transcript_id "g183.t1"; gene_id "g183"; Scaffold_6 AUGUSTUS stop_codon 844285 844287 . + 0 transcript_id "g183.t1"; gene_id "g183"; # protein sequence = [MGSTSQASWEKIIRIQIADSQEEDIINPSDSEDDGDFEIIAEGIASTVSKTLASVDNGEPQLVVVKTSTIIKKWAKEP # HDIIKECRILERLSHPNVRSIFLLVDCYEHFESKVIPIFDSLLDRSQNTMNIWMPYVPYSLSGLLDSARFVPTPQLEDFSTPHSQAQHSKFLHLARSL # MIQIIYGVTYLHAQSIAHRDLKPANVLLTATGRVILIDFGIARDGSKDYYEESLRNGDLWPEAKDSMYSRSPLGWFIFILLIDLTEPEITVPTAPQNS # SLERALTMRTRSTYGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g183 ### # start gene g184 Scaffold_6 AUGUSTUS gene 847068 848231 1 + . g184 Scaffold_6 AUGUSTUS transcript 847068 848231 1 + . g184.t1 Scaffold_6 AUGUSTUS start_codon 847068 847070 . + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_6 AUGUSTUS CDS 847068 848231 1 + 0 transcript_id "g184.t1"; gene_id "g184"; Scaffold_6 AUGUSTUS stop_codon 848229 848231 . + 0 transcript_id "g184.t1"; gene_id "g184"; # protein sequence = [MFLDESNSPRPSSAPSGPSGDSSLPNGTNPPGGPAGVRSPPSAASLSSNDPSRNRTSNVSCPVRPSPVIPWPFRPFPY # HENAPPPPLPPPAPSFVVPTVPSPVHYVPSVPPNALPNPQLPLWPTPAVPSFLLRPAMPVPGSAVMWEPGTFPMSPLGGSVPLRVHPHILYNPMSPSL # PVLQWDIVLRAEQARVLTGQALIKRPSLNDEAVVPAPTQSFGLNAGPRNGQADRKIDKIWIESDTPILAWWMQRWGPIIIEKSNITVRDVLDAVHTYL # SIPLTNGDYKKAVEVQTPTDGVNHGNGMRLRNARRLRASNGCELRSVALRGRALEDGWSAQLMGADPGESSIYRRSDLLGTYRRFLGLRPIVFSDGSW # KLLLGLGPGPVPKFS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g184 ### # start gene g185 Scaffold_6 AUGUSTUS gene 854256 854600 0.8 + . g185 Scaffold_6 AUGUSTUS transcript 854256 854600 0.8 + . g185.t1 Scaffold_6 AUGUSTUS start_codon 854256 854258 . + 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_6 AUGUSTUS CDS 854256 854600 0.8 + 0 transcript_id "g185.t1"; gene_id "g185"; Scaffold_6 AUGUSTUS stop_codon 854598 854600 . + 0 transcript_id "g185.t1"; gene_id "g185"; # protein sequence = [MKQNFSFLDGCVLQPDPGEDPCLEFWEDDSRLNAYSFGGAVEAIISQSTDSSEPDIMTYWEPAYFPGFVRGNVDSQYN # DWQDGESLTWTYPEGFPEEFIDNKNAVTAVHLKVIW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g185 ### # start gene g186 Scaffold_6 AUGUSTUS gene 856780 857135 0.4 + . g186 Scaffold_6 AUGUSTUS transcript 856780 857135 0.4 + . g186.t1 Scaffold_6 AUGUSTUS start_codon 856780 856782 . + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_6 AUGUSTUS CDS 856780 856790 0.4 + 0 transcript_id "g186.t1"; gene_id "g186"; Scaffold_6 AUGUSTUS CDS 856844 857135 0.78 + 1 transcript_id "g186.t1"; gene_id "g186"; Scaffold_6 AUGUSTUS stop_codon 857133 857135 . + 0 transcript_id "g186.t1"; gene_id "g186"; # protein sequence = [MADALFKISFELSQKHWGYQGLKNYRIATLDFLYNRKSQPRSALSRIRCPVKLVYGTDDVAYPQEYNEKFFRELEDAG # VDVSLLVVPGAPHFVSVAHANQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g186 ### # start gene g187 Scaffold_6 AUGUSTUS gene 870286 870894 0.44 + . g187 Scaffold_6 AUGUSTUS transcript 870286 870894 0.44 + . g187.t1 Scaffold_6 AUGUSTUS start_codon 870286 870288 . + 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_6 AUGUSTUS CDS 870286 870894 0.44 + 0 transcript_id "g187.t1"; gene_id "g187"; Scaffold_6 AUGUSTUS stop_codon 870892 870894 . + 0 transcript_id "g187.t1"; gene_id "g187"; # protein sequence = [MGNYAAALDYFETALTAPSTHNSPPAGLQLEALKKLRLVQCIALGGPQALPKYTSPVLMRIFKASPYQNLINAFPGSP # HPKDRGEGSSSGNHRLRLLVNKDRELYLSECNLGLVDLLVAEAPKWIIKRLTETYVTLGLAEIGKYIGIDDEQQVRALVLNMVSLPFIVFCSPIVKPS # YRLSRKLFLPQSPTLELSPSTMRLAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g187 ### # start gene g188 Scaffold_6 AUGUSTUS gene 873443 874403 0.42 - . g188 Scaffold_6 AUGUSTUS transcript 873443 874403 0.42 - . g188.t1 Scaffold_6 AUGUSTUS stop_codon 873443 873445 . - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_6 AUGUSTUS CDS 873443 874225 0.88 - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_6 AUGUSTUS CDS 874395 874403 0.42 - 0 transcript_id "g188.t1"; gene_id "g188"; Scaffold_6 AUGUSTUS start_codon 874401 874403 . - 0 transcript_id "g188.t1"; gene_id "g188"; # protein sequence = [MREAEVPPSPTYKSNSSNPFDPFLDDSKVRSKFTQTASIPTLATHPSGKLARRRQPNLPFNSTKSNTPSKAIPVPRSF # NSVGANLSRSEPSASNVRPRRGNPFPAGDPFPICDDLTDTEDDTDDSTPPVTPTRARAAPRFNLGLGDGPRTAPITASSSGFPFSVSSTPSPVGRKTV # RTHHRVPSEGIFAMSSDEESITHRAANGPDIDLKALLRLAAKRLPLSDESEQEREAAAAAAAAYFASSNFQNSPSPEELPPPSFAFV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g188 ### # start gene g189 Scaffold_6 AUGUSTUS gene 879534 885387 0.4 - . g189 Scaffold_6 AUGUSTUS transcript 879534 885387 0.4 - . g189.t1 Scaffold_6 AUGUSTUS stop_codon 879534 879536 . - 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_6 AUGUSTUS CDS 879534 880384 0.52 - 2 transcript_id "g189.t1"; gene_id "g189"; Scaffold_6 AUGUSTUS CDS 881733 885387 0.43 - 0 transcript_id "g189.t1"; gene_id "g189"; Scaffold_6 AUGUSTUS start_codon 885385 885387 . - 0 transcript_id "g189.t1"; gene_id "g189"; # protein sequence = [MFATSSYDSHPSCTISSIRELNSTSPHFRIHARLRGRNHSITTAAMVDCGATALFLNQDFVTRNHVRCAPLHKPIDVF # NIDGTPNRAGRITHFARLALTVDNQERWMDFLITNLGGEDIILGLPWLRKVNPEIDWEKGRLSVKPPRVTIEEVPDEEILYSHLAATHTETPILELPE # LEPPAENPHIEVPLEATLEPSESAAVEEPPIHRIRANHKTRRAWVKAGILEEQTEEVWCAAGFTYSQQLAEEANRDKPVKTFEEMVPEQYRDFKKVFS # ESASERLPAHQPWDHAIDLVPGAPATMRTKIYPMSLNEQEELDRFLEENLRKGYIVPSKSPISSPVFFVKKKDGKLRFVQDYRKLNEYTVKNRYPLPL # VADIISRLQGARYFTKFDVRWGYNNIRIKKGHEWKGAFATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAGKVAVYLDDILIFSNDLEEHRRM # VREVLTRLEKHDLYLRPEKCEFEQQQIEYLGLIISEGEVRMDPVKVAAVRDWPVPTNLRELRGFLGFANFYRRFIRNFAKIARPLNDLTKKDTSFTWT # DTRQKAFDTLREAFISAPILALWTPDRPTRIEVDASGFATGGALMQKQDDGQWHPVAFRSASMQPAERNYEIYDREMLAIIEALKDWRNFLEGLPQPF # DIITDHSNLEFWRTAQDLTRRQARWALYLSRFDFHMIHRPGRVNTQADALSRMAVHHVSDSDDNRQQTVLKPGHFVKIAASILQNPLEDRIRKASERE # AQVLEGLKTVKEHGLQRLANGIAEWEEDNGLVYYRGRVYVPANDDLRTEVLRQCHDHPTAGHPGLHGTLDLVSTHFWWPTLRSFVEKYVEGCEVCARK # KIQRHPRAVTQPLDVPSGLWEEVGVDLITQLPNSQGYDAVLVCTDLYGKQIHAIPCTSSITAEGVADIYYREIFRLHGLPLHFKSDRGPQFAAKLMRS # LLARLGIKSDLTSGYRPQSNGQTERANQEVEKYIRLYVGRRQDDWAEHLPMAEFVINSRTHSALGMSPFELTYGYLPLFNIPVGQRSGIPAVDDRIRI # LREARQDAGAALHLGKKQQKEGYERGKRKAHQFKVGDLVWLSAEDINLQLSSEKLGDRQLGPYRILEKIGPLDYRLDLPLSLDRLHPVFHVDKLYPWK # GNSINGEIPTPPEPVYLEDEDEPEYEVEEILDSRVRWKKLEYLVKWKGYDAGHNSWEPAANLSWTTQDFSNSVVTVPGGNAPLGLEENRTNLHLPDDI # WGGGGGSGETQGVEDFSGPFAPREGNLGYRSTGPSDVEPSYNNQYGWGQRGNYRESYENYGADNRGGGYRRNYHEGNLGMQGGGYEGNLGNQGRDYGG # SYGGSYGGFYGEGYKGPDSGYGGYNRGLYQNFERNYPGGRRYDHFSQSRSLQEFIKDNRGIKGLEVAESARTGFQEATHLGTAQASEVAQRGVSSITE # KLREPTAEGRSFYSYVRYGGLIALLDSEKARKSLVGKTEPTLSPLLTQFLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g189 ### # start gene g190 Scaffold_6 AUGUSTUS gene 886040 886603 0.89 - . g190 Scaffold_6 AUGUSTUS transcript 886040 886603 0.89 - . g190.t1 Scaffold_6 AUGUSTUS stop_codon 886040 886042 . - 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_6 AUGUSTUS CDS 886040 886603 0.89 - 0 transcript_id "g190.t1"; gene_id "g190"; Scaffold_6 AUGUSTUS start_codon 886601 886603 . - 0 transcript_id "g190.t1"; gene_id "g190"; # protein sequence = [MSTPIPPAPNTSAEDLMAQLIRQVANLATAMEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQNWASEQPDLAKSQVK # LIKSALGFFTESAGDWATPHLLHFNAENPPFGGNWEAFLKEFSQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDSEIGLKCLILTCGNVSSLH # YSQRSDNTSSP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g190 ### # start gene g191 Scaffold_6 AUGUSTUS gene 887603 887971 0.99 - . g191 Scaffold_6 AUGUSTUS transcript 887603 887971 0.99 - . g191.t1 Scaffold_6 AUGUSTUS stop_codon 887603 887605 . - 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_6 AUGUSTUS CDS 887603 887971 0.99 - 0 transcript_id "g191.t1"; gene_id "g191"; Scaffold_6 AUGUSTUS start_codon 887969 887971 . - 0 transcript_id "g191.t1"; gene_id "g191"; # protein sequence = [MQEILNDYGKSGENPYFKHFLSGVQGLYSLDGSSHQPKTYPATAPSSPPSMRLDIGDDSDNDSDSDMGSEAYRGNDRD # MDEPWEENTETTSTNEGKDQNTEILYLDQGILFYLFEFCFDELL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g191 ### # start gene g192 Scaffold_6 AUGUSTUS gene 890535 891851 0.99 - . g192 Scaffold_6 AUGUSTUS transcript 890535 891851 0.99 - . g192.t1 Scaffold_6 AUGUSTUS stop_codon 890535 890537 . - 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_6 AUGUSTUS CDS 890535 891851 0.99 - 0 transcript_id "g192.t1"; gene_id "g192"; Scaffold_6 AUGUSTUS start_codon 891849 891851 . - 0 transcript_id "g192.t1"; gene_id "g192"; # protein sequence = [MEGSNSDTQKPSESLTCLPSPQPASPPPSLPSQPPSETPDQSPSQTPFETPHGTPRESPLEMHFETHFETHFETLLET # PLETPLETPLETPLETPLETPLESCFEMPRESCFGTPLETPRESRFKTPLKMPCESPLETPHESPLEMPRESPLEMPRESRFEMPLETRFEALLESRF # EMPRESRFEMPRQSHFETPLETPRQSRFESRFESPHESPSETHFESPDKTPYQAPPKTPLETPYKPHSLQLLSPLPPCQLAPSTPSSASTLSQSLPGS # PLKDQPPPSNRDSQPLKRKRTKKNPGRTPGGGFEDPGPVACPRKSVRTKKRRRTDTYDYEDNTRSRFATGNVAAEPSKDVSVDLTTQLARISFGTQTT # VGHVDYSSWVSGLKAIMEGTLDNVKDLAVSSLLNIARRCDLASKVDRTARFVRMLNELYFAAKVNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g192 ### # start gene g193 Scaffold_6 AUGUSTUS gene 898401 899417 0.91 + . g193 Scaffold_6 AUGUSTUS transcript 898401 899417 0.91 + . g193.t1 Scaffold_6 AUGUSTUS start_codon 898401 898403 . + 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_6 AUGUSTUS CDS 898401 899417 0.91 + 0 transcript_id "g193.t1"; gene_id "g193"; Scaffold_6 AUGUSTUS stop_codon 899415 899417 . + 0 transcript_id "g193.t1"; gene_id "g193"; # protein sequence = [MSPFTEAIYKDFGDAKCHPPRLTIATLNAIDSIQARNIFPQDLPAYQKASVMARTNGVVSPFWRDWPLAEPCEFLTPE # PLHHWHKMFWDHDIKWAIQAVGATSIDFRFSIHQPTVGYRSFKEGISTLKQVTGRTQRDIQRYLIPLISGAVTSRFVTALRALMDFRYAGQATRFNQA # SASRVQAALDEFHKNKDIIQDLKARVNPKGVPIVHWEIPKLEFMQSVEPSIRASGPIMQWTADTTEHTHITLVKDPARSGNNHDFEVQICRHLDRQAR # VRRFDLMTAMVDARVDFRLGDIEGDEDRGEEGLDEEEATTRIILRATSSSPQSCIEEAFWIVSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g193 ### # start gene g194 Scaffold_6 AUGUSTUS gene 903527 903850 0.57 + . g194 Scaffold_6 AUGUSTUS transcript 903527 903850 0.57 + . g194.t1 Scaffold_6 AUGUSTUS start_codon 903527 903529 . + 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_6 AUGUSTUS CDS 903527 903850 0.57 + 0 transcript_id "g194.t1"; gene_id "g194"; Scaffold_6 AUGUSTUS stop_codon 903848 903850 . + 0 transcript_id "g194.t1"; gene_id "g194"; # protein sequence = [MLYQDEMIVYYSDQRDPDFGQKLVHQTSADLLTWEAAVNDVAYDVFDDRPGMTTVALLPNGSYIMTYEFFGAPEASFA # VYYRISDDPTAFDSAPGQVTSRNRWNDTY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g194 ### # start gene g195 Scaffold_6 AUGUSTUS gene 908484 909095 0.97 + . g195 Scaffold_6 AUGUSTUS transcript 908484 909095 0.97 + . g195.t1 Scaffold_6 AUGUSTUS start_codon 908484 908486 . + 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_6 AUGUSTUS CDS 908484 909095 0.97 + 0 transcript_id "g195.t1"; gene_id "g195"; Scaffold_6 AUGUSTUS stop_codon 909093 909095 . + 0 transcript_id "g195.t1"; gene_id "g195"; # protein sequence = [MDLQRITKASPSLPCPPKNTTDAHCRSRCRSVGSEFISQLLSIPTESSPFRLVSLSSSSRTVYFEPTNAITSIEKWKT # ILSESNEKPDYESLTAKLSSSISPSTKVAIVDNTSSDEIASLYPKWLKAGINVITPNKKAYSGDLRLYEEILSASKESGARFLNESTVGAGLPVISTL # KELVATGDKVSSNLIRFCALLDERKYI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g195 ### # start gene g196 Scaffold_6 AUGUSTUS gene 910296 910661 0.88 - . g196 Scaffold_6 AUGUSTUS transcript 910296 910661 0.88 - . g196.t1 Scaffold_6 AUGUSTUS stop_codon 910296 910298 . - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_6 AUGUSTUS CDS 910296 910661 0.88 - 0 transcript_id "g196.t1"; gene_id "g196"; Scaffold_6 AUGUSTUS start_codon 910659 910661 . - 0 transcript_id "g196.t1"; gene_id "g196"; # protein sequence = [MSGKGGKSGKTGGKASGDGSSKSQSRSAKAGLQFPVGRVHRLLKKGNYAQRVGAGAPGEFDLKSLRLQILISSSFFSV # YLAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g196 ### # start gene g197 Scaffold_6 AUGUSTUS gene 910996 911259 0.76 + . g197 Scaffold_6 AUGUSTUS transcript 910996 911259 0.76 + . g197.t1 Scaffold_6 AUGUSTUS start_codon 910996 910998 . + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_6 AUGUSTUS CDS 910996 911259 0.76 + 0 transcript_id "g197.t1"; gene_id "g197"; Scaffold_6 AUGUSTUS stop_codon 911257 911259 . + 0 transcript_id "g197.t1"; gene_id "g197"; # protein sequence = [MAPKPASTAGKAPASTAGKAPAKTEGSKAAKKTSAKSSAGAADGEKKKRKKARKETYSSYIYKGSFSLLTGCEFIAHS # ASSSETSAP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g197 ### # start gene g198 Scaffold_6 AUGUSTUS gene 914130 915522 0.18 + . g198 Scaffold_6 AUGUSTUS transcript 914130 915522 0.18 + . g198.t1 Scaffold_6 AUGUSTUS start_codon 914130 914132 . + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_6 AUGUSTUS CDS 914130 914820 0.19 + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_6 AUGUSTUS CDS 914898 915034 0.23 + 2 transcript_id "g198.t1"; gene_id "g198"; Scaffold_6 AUGUSTUS CDS 915118 915522 0.35 + 0 transcript_id "g198.t1"; gene_id "g198"; Scaffold_6 AUGUSTUS stop_codon 915520 915522 . + 0 transcript_id "g198.t1"; gene_id "g198"; # protein sequence = [MIQASPSESDADLIQELHVRVDEISSSLDSSDAILVKTLIALLSHLHRLSILVNPSSPKPITSFWNAADSDESLNLFD # ALKRQLSDFQLERSTSQQDVVPRGSKPVLTVEAALLWSKIDQELDTVVSMCKERTEYLSYDPPDYEYDTLPVYDHDSRSSMEDFDQPKLRAEVSSSSV # IPGGQMSEKRKLDLEAVTMAIDRLYLVAPQLHNQRVELKSTKLAQMEKARRQVLKLINKASGRTLKDQSVILDGGMQARLEKVRQRDMAKVRLMRLIF # YPDASLQIKIKDPDAMLSLPEFIREAVPVDSLKIQNPKALLTLPEFIKEVPPPHIISSRSTSALPTPAPAGGAFARLKSRSKNRDRSMSAPPLAWLRS # SSSKSNLQESQSKSNEDASAPQREYLKYLVSSGNSHDK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g198 ### # start gene g199 Scaffold_6 AUGUSTUS gene 922856 923185 0.39 + . g199 Scaffold_6 AUGUSTUS transcript 922856 923185 0.39 + . g199.t1 Scaffold_6 AUGUSTUS start_codon 922856 922858 . + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_6 AUGUSTUS CDS 922856 923185 0.39 + 0 transcript_id "g199.t1"; gene_id "g199"; Scaffold_6 AUGUSTUS stop_codon 923183 923185 . + 0 transcript_id "g199.t1"; gene_id "g199"; # protein sequence = [MLGADYNAKDKKYEASEVVVKILYGPVDGKILGEVKALKDVGYFISSGLLPPYRKPAILMNKIDGAQIKSTEVWKKAN # QSRREELLNQMKLLVKNEIVTWADEKRLLHV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g199 ### # start gene g200 Scaffold_6 AUGUSTUS gene 925858 927089 0.33 + . g200 Scaffold_6 AUGUSTUS transcript 925858 927089 0.33 + . g200.t1 Scaffold_6 AUGUSTUS start_codon 925858 925860 . + 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_6 AUGUSTUS CDS 925858 925875 0.36 + 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_6 AUGUSTUS CDS 926385 927089 0.39 + 0 transcript_id "g200.t1"; gene_id "g200"; Scaffold_6 AUGUSTUS stop_codon 927087 927089 . + 0 transcript_id "g200.t1"; gene_id "g200"; # protein sequence = [MESVVLDLFPTYIQTSKGFSSHDATVMTIIGNCGAIAGGGIAGYVSQHIGRRLTIIIFVLLVACFIPLWIIPSSFSGL # AAGAFCIQFGVQGAWGVIPIQLAEMSPPAFRATFPGVAYQLGNMVSSASAQIESTGGDHLKTTIAVPVSSDYPDGRKTVPDYAKVQGILIGCVAAFVL # VVTLFGPEKHGRQFEKHRAAFEEGGGDDDAEIGDVAPTPRDAEASGEKDSVDVKTHDHHEIEKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g200 ### # start gene g201 Scaffold_6 AUGUSTUS gene 928774 929348 0.35 + . g201 Scaffold_6 AUGUSTUS transcript 928774 929348 0.35 + . g201.t1 Scaffold_6 AUGUSTUS start_codon 928774 928776 . + 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_6 AUGUSTUS CDS 928774 928886 0.35 + 0 transcript_id "g201.t1"; gene_id "g201"; Scaffold_6 AUGUSTUS CDS 928949 929348 1 + 1 transcript_id "g201.t1"; gene_id "g201"; Scaffold_6 AUGUSTUS stop_codon 929346 929348 . + 0 transcript_id "g201.t1"; gene_id "g201"; # protein sequence = [MSTAHRPTWDPAQARDVKGGSRQVSVRDMPSHTKLKFRQIGQTSTSEVDKRDLRAELLAAEQEARNKKRKAEGLPLEV # EDTPAPVADDETNKRRKLLQDAIELDKDDDEEEEEENEKETERKKGQDDNEDDNRCVPRRRILRFVNDQNHSDDDESDEEDDTAALLRELEK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g201 ### # start gene g202 Scaffold_6 AUGUSTUS gene 936009 936344 0.79 + . g202 Scaffold_6 AUGUSTUS transcript 936009 936344 0.79 + . g202.t1 Scaffold_6 AUGUSTUS start_codon 936009 936011 . + 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_6 AUGUSTUS CDS 936009 936344 0.79 + 0 transcript_id "g202.t1"; gene_id "g202"; Scaffold_6 AUGUSTUS stop_codon 936342 936344 . + 0 transcript_id "g202.t1"; gene_id "g202"; # protein sequence = [MSSSKATEVETKFSEKGPGKRPRAPSPLSQEEKQAKRAKAVARATAKRLKKQRGHIPEVCSPEDVRWTDIVSLLGQDV # VDKAAEDGSEFNSPFLFKSEVELEVKAISSNGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g202 ### # start gene g203 Scaffold_6 AUGUSTUS gene 938564 939442 0.9 + . g203 Scaffold_6 AUGUSTUS transcript 938564 939442 0.9 + . g203.t1 Scaffold_6 AUGUSTUS start_codon 938564 938566 . + 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_6 AUGUSTUS CDS 938564 939442 0.9 + 0 transcript_id "g203.t1"; gene_id "g203"; Scaffold_6 AUGUSTUS stop_codon 939440 939442 . + 0 transcript_id "g203.t1"; gene_id "g203"; # protein sequence = [MILEPWTKQQMNIVLLGETGVGKTELVNLIANVCAGATLENFDEKIELSNEAGHNGGSQTIQPHLYSITCVNGHKVNI # LDTPGLAGDRGIHKDTEQMAAIVHAITENFDAIDAIVILACGHVPRLGLSTHYTMNALSNMLPKSLSDNVAFIFTMVSSTLMLSFDTNWLPQELRTTH # TCSIDNSSKLWFKYQKRLREEPSLEEDLREEMNEISHRFERATKTLSQFFQYLDKRKVQPTQPVLELYNISVDIETRISNTIARASQAEDKRMRLQKL # QVEFENQVSYFQDLLCKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g203 ### # start gene g204 Scaffold_6 AUGUSTUS gene 939770 940129 0.86 + . g204 Scaffold_6 AUGUSTUS transcript 939770 940129 0.86 + . g204.t1 Scaffold_6 AUGUSTUS start_codon 939770 939772 . + 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_6 AUGUSTUS CDS 939770 940129 0.86 + 0 transcript_id "g204.t1"; gene_id "g204"; Scaffold_6 AUGUSTUS stop_codon 940127 940129 . + 0 transcript_id "g204.t1"; gene_id "g204"; # protein sequence = [MIDNESKWRYESAKTELQKIDIITEMIKKEMAQLEQEITDSMSGVTDTCEKYNKHSLSGNFMPYVFSAIGLLKLREQH # EMNMGAGVEEMDRISKGIDYLEKKRKVLEQAVKGVNIHPST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g204 ### # start gene g205 Scaffold_6 AUGUSTUS gene 943234 943742 0.85 + . g205 Scaffold_6 AUGUSTUS transcript 943234 943742 0.85 + . g205.t1 Scaffold_6 AUGUSTUS start_codon 943234 943236 . + 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_6 AUGUSTUS CDS 943234 943453 0.86 + 0 transcript_id "g205.t1"; gene_id "g205"; Scaffold_6 AUGUSTUS CDS 943504 943742 0.89 + 2 transcript_id "g205.t1"; gene_id "g205"; Scaffold_6 AUGUSTUS stop_codon 943740 943742 . + 0 transcript_id "g205.t1"; gene_id "g205"; # protein sequence = [MLNLETAEILPILPLNQDFDAPNLPVEPFIIPTGEGDFLVVSWTGQSSMGIFLTGSGDPVRGTLTWTQHPTSICLDLP # HATAILPDGTIEIHNIDSQNLVQVIPPPPNDGPVDRTRLVSSLLGYIVPSDQYLTKMSKVPVKLDRRPASELES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g205 ### # start gene g206 Scaffold_6 AUGUSTUS gene 944164 945122 0.58 - . g206 Scaffold_6 AUGUSTUS transcript 944164 945122 0.58 - . g206.t1 Scaffold_6 AUGUSTUS stop_codon 944164 944166 . - 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_6 AUGUSTUS CDS 944164 944689 0.8 - 1 transcript_id "g206.t1"; gene_id "g206"; Scaffold_6 AUGUSTUS CDS 944752 945122 0.72 - 0 transcript_id "g206.t1"; gene_id "g206"; Scaffold_6 AUGUSTUS start_codon 945120 945122 . - 0 transcript_id "g206.t1"; gene_id "g206"; # protein sequence = [MSSHRFPYTDTLKILQKWGPGCHFLGHGLDSDIDQLEKILEEESKLDPSKPPILALFTEFPSNPLLRSADLPRLRALA # DQYDFLIVIDETIGNFINVEVLPFADIVVSSLTKVFSGSSNVMGGSLVLNPKGRHYTILRCHLDSNYEDTYFDQDAIFMERNSRDFQRRIKVIDINTE # AICDFLYSRSQAAGVPNAVIKDVAYPKYTTPAHYAARRIKANAQTDAEQGGYGGLFSVTFTSSSASHAFFDALPCYKGPSLGTNFTLACPFTILAHYN # ELDWAAQYGVDADLIRVSVWAGGY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g206 ### # start gene g207 Scaffold_6 AUGUSTUS gene 947769 948611 0.81 - . g207 Scaffold_6 AUGUSTUS transcript 947769 948611 0.81 - . g207.t1 Scaffold_6 AUGUSTUS stop_codon 947769 947771 . - 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_6 AUGUSTUS CDS 947769 948611 0.81 - 0 transcript_id "g207.t1"; gene_id "g207"; Scaffold_6 AUGUSTUS start_codon 948609 948611 . - 0 transcript_id "g207.t1"; gene_id "g207"; # protein sequence = [MNGLSLGETRSSLDSERSNPASPIHVNGNGSAQAEPDESPDSIERLQRELQRTREEKEALATQYRNLLAKLTQMRTTL # GNKLKQDAVCTFVSSVSPQLIICLVQEELDRREQLVQQLTAQNDDLNSTLETLKEELISASEESARTAAELDNMRNRAFQETTHESLLRERELRETQT # ELEQCRLERDEWERVALQERAFSEDARSAAESITRDLELEKERRARELVELALQRERGDNLQSVLQDFQAGTSSSHFERINHLSVTLKQRNTSCGKLS # KTMKRN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g207 ### # start gene g208 Scaffold_6 AUGUSTUS gene 949764 951242 0.88 + . g208 Scaffold_6 AUGUSTUS transcript 949764 951242 0.88 + . g208.t1 Scaffold_6 AUGUSTUS start_codon 949764 949766 . + 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_6 AUGUSTUS CDS 949764 951242 0.88 + 0 transcript_id "g208.t1"; gene_id "g208"; Scaffold_6 AUGUSTUS stop_codon 951240 951242 . + 0 transcript_id "g208.t1"; gene_id "g208"; # protein sequence = [MVKSLFGIDDFAFLSEDHFLLVEPNGLFDVYSFSDSISDPANPILRACYELPMLSPAYSFWYISLSSNPSPRFPGPTG # EEKTYYCSPADRLHACCIYVHQSALPDRDTVYPFVFFFHPDTLLNPPSPRKPSSGNAEIDIYSTWQGPNAIEASSLSTLEYNSPVLSDLVSSSASSAP # SSPQSGSSASSVSLDDTSHNLLNFSTPRAIHAGSSSMLFDASPSTSGRATPSSTQSRLPIPWEAWGPQNTRWFLEHLSKDWQRSIYGLRTADCVVDRA # ALEGLLHRDGSRDLSGNSENRHGDSDSDNEGNGGDESDEDEDAFIFDEAVGDIESQLGCTSTLPKFLRVRDFNPYSISKALEEEEEIPGTQDPPLPRT # PCSPSYDVQEIGGCSPDMIRDRGGYRRVVNGPTKVNVRGVFRENIVSCLPYVEVISKDTFNVNEIMMDDCRLLLIKVRLPVLFWAGVADLVLDIEERQ # RTKIENHQCFDHVDLWHGGIKH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g208 ### # start gene g209 Scaffold_6 AUGUSTUS gene 955748 956143 0.55 + . g209 Scaffold_6 AUGUSTUS transcript 955748 956143 0.55 + . g209.t1 Scaffold_6 AUGUSTUS start_codon 955748 955750 . + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_6 AUGUSTUS CDS 955748 956143 0.55 + 0 transcript_id "g209.t1"; gene_id "g209"; Scaffold_6 AUGUSTUS stop_codon 956141 956143 . + 0 transcript_id "g209.t1"; gene_id "g209"; # protein sequence = [MLHVGVGNGGGEMAAASNAETEYIVPRLDRPHSMELDSNTQQEQCNEGTVAFHMVHVGMGDGGGEIHYTNKNARMTQG # EDTRTLAPASISETEYIRLGDLDSPHAKDGKSAVLFWALQWKYTKVETVSGGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g209 ### # start gene g210 Scaffold_6 AUGUSTUS gene 958194 958811 0.95 - . g210 Scaffold_6 AUGUSTUS transcript 958194 958811 0.95 - . g210.t1 Scaffold_6 AUGUSTUS stop_codon 958194 958196 . - 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_6 AUGUSTUS CDS 958194 958811 0.95 - 0 transcript_id "g210.t1"; gene_id "g210"; Scaffold_6 AUGUSTUS start_codon 958809 958811 . - 0 transcript_id "g210.t1"; gene_id "g210"; # protein sequence = [MIIEPWAKREINIVLLGEIATGKTALVNLIANMCAGSTLEDLEEKIELSNEAGNNGGSQTIQPHLYSITCVNGQKVNI # LDTPGLADGRGMAKDIEHMKAIVDAIKKNFHTLDGIVIVESGYSYHLSPPLYSTLDNLSHLFPDSIANNIAFVFTVVGPPPEKPHFVTTSLREELQKA # PQWSINNPLALWFKYQKKLAEGWSDEEHP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g210 ### # start gene g211 Scaffold_6 AUGUSTUS gene 959714 960407 0.46 - . g211 Scaffold_6 AUGUSTUS transcript 959714 960407 0.46 - . g211.t1 Scaffold_6 AUGUSTUS stop_codon 959714 959716 . - 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_6 AUGUSTUS CDS 959714 959932 1 - 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_6 AUGUSTUS CDS 960031 960127 0.69 - 1 transcript_id "g211.t1"; gene_id "g211"; Scaffold_6 AUGUSTUS CDS 960238 960276 0.65 - 1 transcript_id "g211.t1"; gene_id "g211"; Scaffold_6 AUGUSTUS CDS 960388 960407 0.81 - 0 transcript_id "g211.t1"; gene_id "g211"; Scaffold_6 AUGUSTUS start_codon 960405 960407 . - 0 transcript_id "g211.t1"; gene_id "g211"; # protein sequence = [METFSTCGPRTWVTDYLITAGDIALLSNRDLSTPQSSAQWSLHKLWSTGHEGDQVLVTGGEDGKICVWPGLSQGGLGG # RGVVVEDESAMDVDSDLGNKRSRSRDMDWDAEDVDPNGKNGKRLKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g211 ### # start gene g212 Scaffold_6 AUGUSTUS gene 964784 964984 0.3 + . g212 Scaffold_6 AUGUSTUS transcript 964784 964984 0.3 + . g212.t1 Scaffold_6 AUGUSTUS start_codon 964784 964786 . + 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_6 AUGUSTUS CDS 964784 964984 0.3 + 0 transcript_id "g212.t1"; gene_id "g212"; Scaffold_6 AUGUSTUS stop_codon 964982 964984 . + 0 transcript_id "g212.t1"; gene_id "g212"; # protein sequence = [MTTNNYGMPALSAEAKAEIDKASAKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGLHLTRLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g212 ### # start gene g213 Scaffold_6 AUGUSTUS gene 965089 965574 0.71 + . g213 Scaffold_6 AUGUSTUS transcript 965089 965574 0.71 + . g213.t1 Scaffold_6 AUGUSTUS start_codon 965089 965091 . + 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_6 AUGUSTUS CDS 965089 965574 0.71 + 0 transcript_id "g213.t1"; gene_id "g213"; Scaffold_6 AUGUSTUS stop_codon 965572 965574 . + 0 transcript_id "g213.t1"; gene_id "g213"; # protein sequence = [MFPQSVGDERGSRLLLEQLVHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLE # TVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g213 ### # start gene g214 Scaffold_6 AUGUSTUS gene 966034 966303 0.22 + . g214 Scaffold_6 AUGUSTUS transcript 966034 966303 0.22 + . g214.t1 Scaffold_6 AUGUSTUS start_codon 966034 966036 . + 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_6 AUGUSTUS CDS 966034 966303 0.22 + 0 transcript_id "g214.t1"; gene_id "g214"; Scaffold_6 AUGUSTUS stop_codon 966301 966303 . + 0 transcript_id "g214.t1"; gene_id "g214"; # protein sequence = [MPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVR # VFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g214 ### # start gene g215 Scaffold_6 AUGUSTUS gene 966891 968925 0.06 + . g215 Scaffold_6 AUGUSTUS transcript 966891 968925 0.06 + . g215.t1 Scaffold_6 AUGUSTUS start_codon 966891 966893 . + 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_6 AUGUSTUS CDS 966891 967487 0.08 + 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_6 AUGUSTUS CDS 967822 968925 0.41 + 0 transcript_id "g215.t1"; gene_id "g215"; Scaffold_6 AUGUSTUS stop_codon 968923 968925 . + 0 transcript_id "g215.t1"; gene_id "g215"; # protein sequence = [MRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIV # ESFLRDLSIDDERRNIAIVANQSVAYEDHSDHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLN # QTLGLARNIPFKFGEVTVYLQLHQNIVLDGYKRCEQETFSKKELSEAYVLASREHLKSQDEQAEEIIDCYLNQKTIGDKQVFCVWRDGVLGEFDDQLN # NDQFNLNPIKSFFLQNGRIKPKPVRKKVQKRRFVEPILQNFSLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTE # SFQRSQPSFEKVRYESRQRKKGKAQDSKDKKENVQADVVTEPPTNKLEERIKLNQQDRSPINLIDETNKQVDNEAIGVEKPINLNTEEVFTKYKPVDK # KVNPIKATLPDEFRIERHIHGDPLLELPELSKHPKPFVPTGRYTEERKEIIDKNHPEGFLWEQERDLMHEMMCKQEAGFAWEPSEAGPLKMNSFHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g215 ### # start gene g216 Scaffold_6 AUGUSTUS gene 969273 970754 0.63 + . g216 Scaffold_6 AUGUSTUS transcript 969273 970754 0.63 + . g216.t1 Scaffold_6 AUGUSTUS start_codon 969273 969275 . + 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_6 AUGUSTUS CDS 969273 970754 0.63 + 0 transcript_id "g216.t1"; gene_id "g216"; Scaffold_6 AUGUSTUS stop_codon 970752 970754 . + 0 transcript_id "g216.t1"; gene_id "g216"; # protein sequence = [MTTFQTPYGPHRLVKLPMGWTNSVPIFHDDVTYILRDEIPHVTIPYIDDVPVKGPSTRYELPEGGYETIPENPGIRRF # VWEHFQNMNRVIQRMKYAGGTFSGTKAFLCCEETIVVGHRCTYEGSMPEEHIAQVVLEWPPCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSN # VPFEWNEKCDKAMDELKDGIRDCPALRPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHV # YGCRRLTVETDASYIKGMLDNPSCGPNATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEP # YQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDATCEVFSRNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIGK # YLSNPSDESWVKCQKMNGLNLLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g216 ### # start gene g217 Scaffold_6 AUGUSTUS gene 971000 972112 0.44 + . g217 Scaffold_6 AUGUSTUS transcript 971000 972112 0.44 + . g217.t1 Scaffold_6 AUGUSTUS start_codon 971000 971002 . + 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_6 AUGUSTUS CDS 971000 972112 0.44 + 0 transcript_id "g217.t1"; gene_id "g217"; Scaffold_6 AUGUSTUS stop_codon 972110 972112 . + 0 transcript_id "g217.t1"; gene_id "g217"; # protein sequence = [MKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEE # VVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIKATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDI # VESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIR # RTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYWMTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g217 ### # start gene g218 Scaffold_6 AUGUSTUS gene 972372 973046 0.77 - . g218 Scaffold_6 AUGUSTUS transcript 972372 973046 0.77 - . g218.t1 Scaffold_6 AUGUSTUS stop_codon 972372 972374 . - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_6 AUGUSTUS CDS 972372 972611 1 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_6 AUGUSTUS CDS 972879 973046 0.77 - 0 transcript_id "g218.t1"; gene_id "g218"; Scaffold_6 AUGUSTUS start_codon 973044 973046 . - 0 transcript_id "g218.t1"; gene_id "g218"; # protein sequence = [MFCIHDSFHVVESSQHSLSHTGSNKGSNKEEKSAVNDVLLVSARFIATLTVMFLLTVIADEACSILKSRQDSGSDSSA # SDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g218 ### # start gene g219 Scaffold_6 AUGUSTUS gene 974893 975237 0.53 - . g219 Scaffold_6 AUGUSTUS transcript 974893 975237 0.53 - . g219.t1 Scaffold_6 AUGUSTUS stop_codon 974893 974895 . - 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_6 AUGUSTUS CDS 974893 975237 0.53 - 0 transcript_id "g219.t1"; gene_id "g219"; Scaffold_6 AUGUSTUS start_codon 975235 975237 . - 0 transcript_id "g219.t1"; gene_id "g219"; # protein sequence = [MATLFRWPSPFNLSGLDFDNRTPGEWIDLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGAS # SQVGGSIPMELDLPAIESLAEPALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g219 ### # start gene g220 Scaffold_6 AUGUSTUS gene 976149 976851 0.35 - . g220 Scaffold_6 AUGUSTUS transcript 976149 976851 0.35 - . g220.t1 Scaffold_6 AUGUSTUS stop_codon 976149 976151 . - 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_6 AUGUSTUS CDS 976149 976585 0.78 - 2 transcript_id "g220.t1"; gene_id "g220"; Scaffold_6 AUGUSTUS CDS 976644 976851 0.48 - 0 transcript_id "g220.t1"; gene_id "g220"; Scaffold_6 AUGUSTUS start_codon 976849 976851 . - 0 transcript_id "g220.t1"; gene_id "g220"; # protein sequence = [MRLAPSKDLDVFASLRGKVSPAVTSKITTPSPPLEIKPSTPAPKAPVAPPRLIRRNRELENLKTDASSFLASPRSARS # KDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRSRKVAPAASKGKARQIVVTDEDSASNEVESEDE # DEEEDSAPPPKRLKTTSSISGKVYSSFISFYFTNLMGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g220 ### # start gene g221 Scaffold_6 AUGUSTUS gene 979712 980500 0.83 - . g221 Scaffold_6 AUGUSTUS transcript 979712 980500 0.83 - . g221.t1 Scaffold_6 AUGUSTUS stop_codon 979712 979714 . - 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_6 AUGUSTUS CDS 979712 980500 0.83 - 0 transcript_id "g221.t1"; gene_id "g221"; Scaffold_6 AUGUSTUS start_codon 980498 980500 . - 0 transcript_id "g221.t1"; gene_id "g221"; # protein sequence = [MEERSSSKSSMNKPEVFKGKDGAEARRFMAQFQIGRQNNRISPRAKLNLSSPPWASSQKVLEIGQLPICYTSVQRIPL # SEETGYVLEGISQRFEPMDPGMEARSEIKNLRQSKGQTVAEFAQKFKDIGDRTEMSDIDLRNASSPPYFRRSDNTLSFETSPKRIAPTLKEAIKRAIS # VDVYLHDPTMTGRNTGHAPAHTAHITPADPHAMDIDATHTSTGNSREAFLARNARTMFLVVELKAMLSRIAHTRRLPADTVDAGDT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g221 ### # start gene g222 Scaffold_6 AUGUSTUS gene 982184 982651 0.93 + . g222 Scaffold_6 AUGUSTUS transcript 982184 982651 0.93 + . g222.t1 Scaffold_6 AUGUSTUS start_codon 982184 982186 . + 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_6 AUGUSTUS CDS 982184 982651 0.93 + 0 transcript_id "g222.t1"; gene_id "g222"; Scaffold_6 AUGUSTUS stop_codon 982649 982651 . + 0 transcript_id "g222.t1"; gene_id "g222"; # protein sequence = [MSPESSNINHAVEANRDDSSSSATSTPFSVTSLLPSVSPEPEHQLNAEHEAELQPSLYHSYESIIADAQHFHRISSDV # YGPQSSVFNALAGTPPHPASARGPNVEAIANAMWDRFIALANGDHSLEESTESQGVTLHNFTMEGLHSNLVLMSIIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g222 ### # start gene g223 Scaffold_6 AUGUSTUS gene 986707 987626 0.43 + . g223 Scaffold_6 AUGUSTUS transcript 986707 987626 0.43 + . g223.t1 Scaffold_6 AUGUSTUS start_codon 986707 986709 . + 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_6 AUGUSTUS CDS 986707 986709 0.78 + 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_6 AUGUSTUS CDS 986863 987228 0.7 + 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_6 AUGUSTUS CDS 987288 987626 0.47 + 0 transcript_id "g223.t1"; gene_id "g223"; Scaffold_6 AUGUSTUS stop_codon 987624 987626 . + 0 transcript_id "g223.t1"; gene_id "g223"; # protein sequence = [MDLTRKRKSEASLNTKKGKKGRLSNIEPPAGWSGIDDLPTQLLTSMSAPVPRSNLMSSLSSTASLQTPGSSSSRVSLH # TSVSMSPQIQRDRKLLERNELLERENQELKMSLRISKELEKDSHMASSMIESTYQEESGDSALSIDEDDTRRPQLQSPPPTPSILSNLSNEFMNRDMH # HDEPLLPLTESESSSRDARVEEAGDDIIAMHGDKKPSIQVKSEPQTTAATPTHIQNISI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g223 ### # start gene g224 Scaffold_6 AUGUSTUS gene 987956 988594 0.58 + . g224 Scaffold_6 AUGUSTUS transcript 987956 988594 0.58 + . g224.t1 Scaffold_6 AUGUSTUS start_codon 987956 987958 . + 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_6 AUGUSTUS CDS 987956 988594 0.58 + 0 transcript_id "g224.t1"; gene_id "g224"; Scaffold_6 AUGUSTUS stop_codon 988592 988594 . + 0 transcript_id "g224.t1"; gene_id "g224"; # protein sequence = [MRSSVNPILRGASSIPSQDDDDEIFEISPDQFRAAVKAGKKKAREDGTIADSSNVQPHTQNKVQIPVVKAEPANEFIA # KSGKLMNDLVQSPEASLDDAPAAAMDVSGERSDDGCETLVIDPDAAADSEDFDFDLAYPENDHQSLPPSRDADIKMEDVDAEFVQETPDVNMGNAEME # RDAPNDEEEENQEEGEEEQDLIANLGLTRMCLDSSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g224 ### # start gene g225 Scaffold_6 AUGUSTUS gene 989056 989952 0.78 - . g225 Scaffold_6 AUGUSTUS transcript 989056 989952 0.78 - . g225.t1 Scaffold_6 AUGUSTUS stop_codon 989056 989058 . - 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_6 AUGUSTUS CDS 989056 989952 0.78 - 0 transcript_id "g225.t1"; gene_id "g225"; Scaffold_6 AUGUSTUS start_codon 989950 989952 . - 0 transcript_id "g225.t1"; gene_id "g225"; # protein sequence = [MSYYKAPTIQHPYALSEPFYSRNSSPTTSAYSSQPSSPFFRNATADSSPIGYPQRPSMVPSRRFDPGQISRSNDAVGY # GVRPQSLNSQLTRSASAQSAPPSMASSQIHAPLDLLPNPFQDPVSRTTTPSTISSGTRVPAGSPNVSLSFGSRGFPLPPSYNITSWSQHTNEYLKSYT # SNQVQTPPSTPRSLMPGLPVEAKRSLPPVVVPQRPLSFGSIAASLHSTGLPSPPTAAARLLPHPRLEAHLELGLSKQILDQSRGVALKPVGTTPTSAK # TFRSQLLPTDIPEWLASEHSKNYA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g225 ### # start gene g226 Scaffold_6 AUGUSTUS gene 994220 997818 0.48 + . g226 Scaffold_6 AUGUSTUS transcript 994220 997818 0.48 + . g226.t1 Scaffold_6 AUGUSTUS start_codon 994220 994222 . + 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_6 AUGUSTUS CDS 994220 996425 0.57 + 0 transcript_id "g226.t1"; gene_id "g226"; Scaffold_6 AUGUSTUS CDS 997304 997818 0.6 + 2 transcript_id "g226.t1"; gene_id "g226"; Scaffold_6 AUGUSTUS stop_codon 997816 997818 . + 0 transcript_id "g226.t1"; gene_id "g226"; # protein sequence = [MRSQNVLRRSRGLFRTKSPLSLYSSSIPPRLPRKSAAKRFLPPHEKRLVSTDNQTLGASASAPPPETPSEEPSDISDA # SSTSLPDDLDKLKGKRRIVSSSSTSKERETVEIPEGLHILWNPDELPSEPLNPGSVPPPEILEEVLHNLLATLHPHTQHRAAYPPPLAQSEEPTLALY # CPIEGGDYIIDSTVVELARRTGSEVLVLDAVQLAAGEWGYFGPGTSLLHELNLHLTNLQAASSLKLPRNPLHFASSGPSSNKSSSMSSYSEDFDEDEP # EFSPPRQMMFTVMTPLRRGSSTTVIKSKRAAPPSKVKVFFDSLVNLPSNSTGPVSRPRIIYIRDFPTLASTASAWYPYLRDAVSQRRKGPMTRSSSPV # PNPITIVFGMSPPLFPPPDRPMHPTGSGVLSLLMNRSASPMFPTSNPKPDKVDWSESPVAEQAREKRLQQRLKSWERGENVAMDEHDKYTEDPSDSAG # RRRSDVIVLEGSIPSQSGFSMPVPSGSSGTVEDAEGPSFYRTSVLVPSVRSVSDERDYRVLRRREINELTMRMAIGQVGGKLSEESVSFKGGFSTTAN # AQSTGETNKTELVPEPSSTDSHLQEINSSSSSPETLEQEPIPKRMWDDPKMWEAWGGQLESWSTVKDIAHRVIGGVVASREATKRPTLEHTNVSWSDV # HYAWGAVHGALDYRKSWLKDSVPVARKLEDEPETEERAKLGYDQVIESVKNDPEIDPHEQRLLSSIVDADLCVSAALDAVKEDIKLPWQVSSSSDSLD # SPATHDQVNTDSKAIEGEGTLEESKGEQVETSPPLEEMPQPSDVKSPHSNSSTHLRTLARRHFDKALKEITPSSSESLGSLADLRKWNEEFGEGRKDR # KRKSVWGRGRFGFTDKEAHSLEEGRVVPSSPTIAVPSSDTSSSL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g226 ### # start gene g227 Scaffold_6 AUGUSTUS gene 998017 998376 0.92 - . g227 Scaffold_6 AUGUSTUS transcript 998017 998376 0.92 - . g227.t1 Scaffold_6 AUGUSTUS stop_codon 998017 998019 . - 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_6 AUGUSTUS CDS 998017 998376 0.92 - 0 transcript_id "g227.t1"; gene_id "g227"; Scaffold_6 AUGUSTUS start_codon 998374 998376 . - 0 transcript_id "g227.t1"; gene_id "g227"; # protein sequence = [MHYHCFKAYRRRKSACPVCSLDWPQNVTDDGLLPVGELAIRDGDDGIRQTRDTVDSDDDEEMENEPSQTETKSRQPQR # SQAGKKGKSKNDDSEEEADEKDETDEEEAEATPPRRRSTRQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g227 ### # start gene g228 Scaffold_6 AUGUSTUS gene 1003847 1006789 0.18 - . g228 Scaffold_6 AUGUSTUS transcript 1003847 1006789 0.18 - . g228.t1 Scaffold_6 AUGUSTUS stop_codon 1003847 1003849 . - 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_6 AUGUSTUS CDS 1003847 1006008 0.56 - 2 transcript_id "g228.t1"; gene_id "g228"; Scaffold_6 AUGUSTUS CDS 1006079 1006393 0.47 - 2 transcript_id "g228.t1"; gene_id "g228"; Scaffold_6 AUGUSTUS CDS 1006477 1006789 0.4 - 0 transcript_id "g228.t1"; gene_id "g228"; Scaffold_6 AUGUSTUS start_codon 1006787 1006789 . - 0 transcript_id "g228.t1"; gene_id "g228"; # protein sequence = [MEMSALGLSGTQALETSGQSSSYPVRTKVAELVYQEPQDIRATSSRHERTTKHRHAEQSAAGTSAPTGGRTRKASSAS # QQAAPLVTATPSFGTNPTNSTNPSHGISSMGVVLNEIQDANSINHQNPESSPSLLFQGSQIANQTNEPPSMINSSPHPSIRFTPPTPIKRSPSVLERP # VVNTNYLSSSNAHAHAPAYHGGTPKAVTRAPEVLQPTRETLQNQMKLSESSRPTVGQIVTSYESRPSPTPELLYSNPGPPTAELKTKSPLQDKAPTPL # GTPQNLTGVEQSPGAAHDTSHNNSPSFNVALSSNRRGRTVSISASNEAASPMKNASIESSTGPFPPSTLPQTSLDTPSSKRSAQVSFTPITQPTPFVS # SSPKHNAWTSDSQTLHNSASAHYRDDFRERPVTNQHATQNPISHAPNPILTTNPGFGNSNPWSAISQPKSTALAADELKDHSPHAETIDKSARIGVSK # AAELSAWPAQTNGIHNSAHSGWNDRNARAVHASPVPNGPGWTLPAQPNTTNFIYPNGPMTNLSQGDRNVVDSSHVPGVVSFPETVGRQNSRSVTQANG # SIPAPQQESGVKSPAVTNPQTSANLYLNPVDPIERPGSTAPFRHPKLAELMSDVTSPARRAPEPVIQPLGAEFLPAGHPPSVEKQDDWMLPPPSKFKD # KPSPAADGFSKVYPSSPFNKDIHNDEYGLGNFRKYPDSSVTEIVAPSASKPTSSTMAYALFSNADAAKESGKNSNVTAHIRVSSQPESFATPSRPPST # RPTQTWSSGPPIQSTTYQTNVPTSSRNRGRSKLPEPEAFLDPVQSRTAASSSHPSDQAYRRPASNVPSEESILKTPSSLAPSMLKPTASRTSIPASTI # SQQDSRKKGLFGMFKSKSIFHSSNCGESVRSMESSDGIRRCPEEHCSDSCGRGKASGGEGVALEIVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g228 ### # start gene g229 Scaffold_6 AUGUSTUS gene 1007699 1008736 0.27 - . g229 Scaffold_6 AUGUSTUS transcript 1007699 1008736 0.27 - . g229.t1 Scaffold_6 AUGUSTUS stop_codon 1007699 1007701 . - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_6 AUGUSTUS CDS 1007699 1008736 0.27 - 0 transcript_id "g229.t1"; gene_id "g229"; Scaffold_6 AUGUSTUS start_codon 1008734 1008736 . - 0 transcript_id "g229.t1"; gene_id "g229"; # protein sequence = [MTISFPAPVNSTAPLLQSQRVGQAYPKSTVPGPSPSAINASYASHTATRSANLAKTYTSSTFNGIYPTASTSASVATA # VVRPEMAKASSSYSKRDREPSDRHGDRTRDRSERERVRDRDYDRAKEKERTRDRSERDKGTVKERDLTKDRDRERERDIERTRKRERDRERDRDRDRD # RDRDRDRDRIKPPAEPIPTAERGVRERDRQRDTDSIFRASVRDKDRTKYRERELPRTDDRTLAYDSGREKLVSKDADKYRESSRRHLDRDTERRPDVE # RSSRHRMTERERDPARSFVNTQKLTSKESSDEAESSDASKNKYSSAYRRTKIKDPIPNISTSVSASFADLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g229 ### # start gene g230 Scaffold_6 AUGUSTUS gene 1011372 1011959 0.4 + . g230 Scaffold_6 AUGUSTUS transcript 1011372 1011959 0.4 + . g230.t1 Scaffold_6 AUGUSTUS start_codon 1011372 1011374 . + 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_6 AUGUSTUS CDS 1011372 1011959 0.4 + 0 transcript_id "g230.t1"; gene_id "g230"; Scaffold_6 AUGUSTUS stop_codon 1011957 1011959 . + 0 transcript_id "g230.t1"; gene_id "g230"; # protein sequence = [MRNLYESFKDYVAVENMDGENKYQAEGFGLQDAKKGIIFESFPPVLHLQLKRFEYDIQRDAMVKINDRHEFPFEIDLG # EFLDANADRSKPWKYRLTGVLVHSGDLHGGHYFALIKPDRDTRWLKFDDDRVTPVTDKEVLEENYGGEPLNGLPPTAQRNQVRAMKRFTNAYMLVYIR # ESAMDEVWLRSLKKTHLPI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g230 ### # start gene g231 Scaffold_6 AUGUSTUS gene 1014660 1015473 0.25 - . g231 Scaffold_6 AUGUSTUS transcript 1014660 1015473 0.25 - . g231.t1 Scaffold_6 AUGUSTUS stop_codon 1014660 1014662 . - 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_6 AUGUSTUS CDS 1014660 1015009 0.31 - 2 transcript_id "g231.t1"; gene_id "g231"; Scaffold_6 AUGUSTUS CDS 1015326 1015473 0.51 - 0 transcript_id "g231.t1"; gene_id "g231"; Scaffold_6 AUGUSTUS start_codon 1015471 1015473 . - 0 transcript_id "g231.t1"; gene_id "g231"; # protein sequence = [MQEKGDCARSRITQKHDNDVRGSRLKAQRLKIKTKKSKRAGFDVAGVSRHPPTPEVILKSALVRRAIADVLRVMRIRE # DKPALQNLVQKGSVGDDLLNSLLAAEKEMEAEIIEVMNEANSFVEGWGPIIFPTANEMIANEKMRAIFEQTGDRRTELGVFLYGAVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g231 ### # start gene g232 Scaffold_6 AUGUSTUS gene 1017845 1018378 0.95 - . g232 Scaffold_6 AUGUSTUS transcript 1017845 1018378 0.95 - . g232.t1 Scaffold_6 AUGUSTUS stop_codon 1017845 1017847 . - 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_6 AUGUSTUS CDS 1017845 1018378 0.95 - 0 transcript_id "g232.t1"; gene_id "g232"; Scaffold_6 AUGUSTUS start_codon 1018376 1018378 . - 0 transcript_id "g232.t1"; gene_id "g232"; # protein sequence = [MKAAEKSPGGMGGPAPVSLQDSGPVSNMPPRSGPSPMPAANGPMPPRGTPIPGQDPGAQRPMMMPHSNSLPPGGRPGP # PVGQGYPQNQPPPRGPYPPNQGPPGSGTPGFGPPGPMPPQGYGPGSGPQIQMRGGMPPPGPGYRGPPPPQGGPMPMQGHPRLRNRFLPSREHHDGSDV # N] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g232 ### # start gene g233 Scaffold_6 AUGUSTUS gene 1019647 1020084 0.93 + . g233 Scaffold_6 AUGUSTUS transcript 1019647 1020084 0.93 + . g233.t1 Scaffold_6 AUGUSTUS start_codon 1019647 1019649 . + 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_6 AUGUSTUS CDS 1019647 1020084 0.93 + 0 transcript_id "g233.t1"; gene_id "g233"; Scaffold_6 AUGUSTUS stop_codon 1020082 1020084 . + 0 transcript_id "g233.t1"; gene_id "g233"; # protein sequence = [MRAANTGPAEQKELAGQHVKKEQKANALAASAAANPPPPPNTSKPLPNPTISLNNASNHSSQPRSSSPASSQPSTPDR # RHSGDASLSPPIVVVSPDNSAESSSSHSLLSERHASNLDSQGNATPPRNTYPQPPKSRTQGYHPYRW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g233 ### # start gene g234 Scaffold_6 AUGUSTUS gene 1021510 1021785 0.72 + . g234 Scaffold_6 AUGUSTUS transcript 1021510 1021785 0.72 + . g234.t1 Scaffold_6 AUGUSTUS start_codon 1021510 1021512 . + 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_6 AUGUSTUS CDS 1021510 1021785 0.72 + 0 transcript_id "g234.t1"; gene_id "g234"; Scaffold_6 AUGUSTUS stop_codon 1021783 1021785 . + 0 transcript_id "g234.t1"; gene_id "g234"; # protein sequence = [MIYSEQQQAVSRFEAWQKMRQKAVENIGGKLPEGFVEIPYPSPPPPPSAEDVDILDLSMELNAASIDDVTGGLDEHGI # ERVPMADPGLDVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g234 ### # start gene g235 Scaffold_6 AUGUSTUS gene 1025557 1027049 0.31 - . g235 Scaffold_6 AUGUSTUS transcript 1025557 1027049 0.31 - . g235.t1 Scaffold_6 AUGUSTUS stop_codon 1025557 1025559 . - 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_6 AUGUSTUS CDS 1025557 1026129 0.99 - 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_6 AUGUSTUS CDS 1026393 1026748 0.5 - 2 transcript_id "g235.t1"; gene_id "g235"; Scaffold_6 AUGUSTUS CDS 1026977 1027049 0.98 - 0 transcript_id "g235.t1"; gene_id "g235"; Scaffold_6 AUGUSTUS start_codon 1027047 1027049 . - 0 transcript_id "g235.t1"; gene_id "g235"; # protein sequence = [MSSVYNEPTAAAIAYGLDKKVSGEHLSSNPRAVRRLRTACERAKRTLSSAAQTSIEMIPCMRVLTSTLPLHVPVSRNS # ARPFRSTLDPVEKVLRDSKIDKANVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPMRLLPTLSGIPPAPRGVPQIEVTFDIDANGILNVSAADK # STGKSNRIVITNDKGVLRRKRLNAWFRGEKYKAEDEAATARITAKNGLESYSYNLRNSLTDEKLADKFSPEDKAKLTTHVDETIKWLDESQEASKEEY # EEKQKELEAIANPIMQKLYGAAGGPDAGGFPGAGGFPGGAPGGFPGAGAEEGPSVEEVD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g235 ### # start gene g236 Scaffold_6 AUGUSTUS gene 1042804 1043578 0.22 + . g236 Scaffold_6 AUGUSTUS transcript 1042804 1043578 0.22 + . g236.t1 Scaffold_6 AUGUSTUS start_codon 1042804 1042806 . + 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_6 AUGUSTUS CDS 1042804 1042932 0.39 + 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_6 AUGUSTUS CDS 1043117 1043436 0.77 + 0 transcript_id "g236.t1"; gene_id "g236"; Scaffold_6 AUGUSTUS CDS 1043548 1043578 0.49 + 1 transcript_id "g236.t1"; gene_id "g236"; Scaffold_6 AUGUSTUS stop_codon 1043576 1043578 . + 0 transcript_id "g236.t1"; gene_id "g236"; # protein sequence = [MSSWLLQVPGVKEDISSIMKENDSWNVMHQPLRILLLVTLYPVYVIYFHIPSFSHLDLVGGIPTKFTGEVITVNEKGQ # DQVVPGLYAAGEAACVSVHGANRLGANSLLDIVVFGRACAHHIKETLTPGKPHKVIPDEAGMESIEFLDKISLMLPFSGMV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g236 ### # start gene g237 Scaffold_6 AUGUSTUS gene 1048983 1049483 0.88 - . g237 Scaffold_6 AUGUSTUS transcript 1048983 1049483 0.88 - . g237.t1 Scaffold_6 AUGUSTUS stop_codon 1048983 1048985 . - 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_6 AUGUSTUS CDS 1048983 1049483 0.88 - 0 transcript_id "g237.t1"; gene_id "g237"; Scaffold_6 AUGUSTUS start_codon 1049481 1049483 . - 0 transcript_id "g237.t1"; gene_id "g237"; # protein sequence = [MLTKIDKQLEEYDSRVGSSLQMISQDAQGRIPVQDLQKALAVIKHRPDDEVGQAVIQKLDVDKDGFVELEHVLGLVQE # EGLGAVSEPFRTYRIPIDSRIGIVLDDDAQSSSGRAAKSKTQSHGRRILCKKTSALMLKAKEHVCIDMSPRKYVRTITIHRGSSRQNR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g237 ### # start gene g238 Scaffold_6 AUGUSTUS gene 1049544 1050342 0.62 - . g238 Scaffold_6 AUGUSTUS transcript 1049544 1050342 0.62 - . g238.t1 Scaffold_6 AUGUSTUS stop_codon 1049544 1049546 . - 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_6 AUGUSTUS CDS 1049544 1049747 0.86 - 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_6 AUGUSTUS CDS 1049803 1049984 0.72 - 2 transcript_id "g238.t1"; gene_id "g238"; Scaffold_6 AUGUSTUS CDS 1050078 1050342 0.76 - 0 transcript_id "g238.t1"; gene_id "g238"; Scaffold_6 AUGUSTUS start_codon 1050340 1050342 . - 0 transcript_id "g238.t1"; gene_id "g238"; # protein sequence = [MISLLTQKVSTLFPRPNYKARVNLAAFRTSGVSPARLREELSTWINLHLHNRVSGVLLVLGRAFNFDRKTGEDEDGKT # NVIKSLESVLKLEVDSDKASYKQKLEVLQQQEELIEDEEEQEQKEEDARRAKREAEEREAQTAQALLPDTELVPESVKAEGDDARMTTEQLKELGEAL # SVLSTRSSVLKERSDLRALMDENLQAEEVSPILHHSKYIV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g238 ### # start gene g239 Scaffold_6 AUGUSTUS gene 1051559 1051915 0.67 + . g239 Scaffold_6 AUGUSTUS transcript 1051559 1051915 0.67 + . g239.t1 Scaffold_6 AUGUSTUS start_codon 1051559 1051561 . + 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_6 AUGUSTUS CDS 1051559 1051915 0.67 + 0 transcript_id "g239.t1"; gene_id "g239"; Scaffold_6 AUGUSTUS stop_codon 1051913 1051915 . + 0 transcript_id "g239.t1"; gene_id "g239"; # protein sequence = [MNDSSSQAYKKARRQYLKTTRNRDPNIDKAWTPFRAAEKHFKARFPPPDFAKVLDLATLDASRAPEVAAGIWAGKSDA # VETRTFVTKSGIKGYDFPSMPGKSLHTYKSAWILYTYPQD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g239 ### # start gene g240 Scaffold_6 AUGUSTUS gene 1056579 1057804 0.51 + . g240 Scaffold_6 AUGUSTUS transcript 1056579 1057804 0.51 + . g240.t1 Scaffold_6 AUGUSTUS start_codon 1056579 1056581 . + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_6 AUGUSTUS CDS 1056579 1056728 0.81 + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_6 AUGUSTUS CDS 1056780 1056910 0.84 + 0 transcript_id "g240.t1"; gene_id "g240"; Scaffold_6 AUGUSTUS CDS 1057153 1057804 0.68 + 1 transcript_id "g240.t1"; gene_id "g240"; Scaffold_6 AUGUSTUS stop_codon 1057802 1057804 . + 0 transcript_id "g240.t1"; gene_id "g240"; # protein sequence = [MVEIKRTDPPQPSANEDSKYRLLYTKSKVYVNPTAYARDNIPGFISLVKRDAPNPSYYLAWIPETLLNERGATEWDKF # VKVEEKADLDDEDNGYGTTLPTLYFHDNESHSFTMPLPKSPQSHTGSSITAYPPPPSLSSPINSSSSWGGEDFIARLKCYAHVLRSNLQPSLFLVDPS # RSDIETHSTQIFDDDAVDDILAQSSYANSHSPVPAHRKPRPLSSPPPTSSLSPNPYSHRSSVLHRSLGSMSSNAQSSSQARMALLQSFSNITRATRHA # AQNILSHPLAKPIVPHLPDPVKSLVNVNGDLKGELG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g240 ### # start gene g241 Scaffold_6 AUGUSTUS gene 1068652 1069725 0.58 - . g241 Scaffold_6 AUGUSTUS transcript 1068652 1069725 0.58 - . g241.t1 Scaffold_6 AUGUSTUS stop_codon 1068652 1068654 . - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_6 AUGUSTUS CDS 1068652 1069725 0.58 - 0 transcript_id "g241.t1"; gene_id "g241"; Scaffold_6 AUGUSTUS start_codon 1069723 1069725 . - 0 transcript_id "g241.t1"; gene_id "g241"; # protein sequence = [MSTEEVELIEAIIERAGPTATTFLTVFKAYNDILLERGLDPHEVVYYGKLLKLGTLKGSSWKEKWDAIKVQNGYGTAL # QDFLVPSKVVVASKHPQVRSGIIVNSRPGPSTILSDDLFSSGLRKSQVSDTEDGSVVDEPPFSKVFSSRKDPSPSDLTNNSLGLELDEGIQRPFSIPV # SSHAPFRRTARPLDHDTVEPITSTPPSHRVVTRGLPTRSKSPIFSETLSMKSESLPLAPRRRNSAINDEDAWKKVAMIQDEREADRFRKDRLIERCFN # VWRQGFRWIIVRCIFIYPMLVYYASDIRPQTSKSTMPETIYSFENCFNAGINELLSITTCMYELTHLLRDVVNARFSGSGNNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g241 ### # start gene g242 Scaffold_6 AUGUSTUS gene 1070097 1071821 0.34 - . g242 Scaffold_6 AUGUSTUS transcript 1070097 1071821 0.34 - . g242.t1 Scaffold_6 AUGUSTUS stop_codon 1070097 1070099 . - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_6 AUGUSTUS CDS 1070097 1070967 0.7 - 1 transcript_id "g242.t1"; gene_id "g242"; Scaffold_6 AUGUSTUS CDS 1071259 1071821 0.37 - 0 transcript_id "g242.t1"; gene_id "g242"; Scaffold_6 AUGUSTUS start_codon 1071819 1071821 . - 0 transcript_id "g242.t1"; gene_id "g242"; # protein sequence = [MDNNIRHFGMLVAEVAAQRAGRNLDFRDWDGDDSGKLWARNLRALLVVRDADADARALNEEDNLYNVISSGTAQAENS # EPKKKSAITIKSDEYDSDNSITGYDSTPSSRSNSPTPSELEEIEKDPSLNVGQKKIPRPIYLAQLGAMLRSMGGMAKDNPSEDADRIEVALNHAEELI # RKKKDYGTELGSLGCSRVGLSTYSNYCLSSDSTSFPSKRLPGPLHRKYLPSSATLPQILSGITRQAIDRGKEATEDKVPEIVRERRFRVQRTKRISEV # DSSTLTARNSPHKQTTFNEVAADYFVAPLINRFWLFLRDEQTREARTAYHEGRTKYHGAGTGLILNSLVMTHFLRTLTVLVHASENTPEWLGFLAPDS # LELALTLGTKPISIADSSTEDTGTAEKGTKEASVLASALELVLIVLDGCIQLDGGRSLSLDQATLLMSVSEWASVVFSRLEDGIKLKDGEESKVPILD # VRLPELS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g242 ### # start gene g243 Scaffold_6 AUGUSTUS gene 1073446 1074287 0.46 + . g243 Scaffold_6 AUGUSTUS transcript 1073446 1074287 0.46 + . g243.t1 Scaffold_6 AUGUSTUS start_codon 1073446 1073448 . + 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_6 AUGUSTUS CDS 1073446 1073940 0.64 + 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_6 AUGUSTUS CDS 1074003 1074287 0.54 + 0 transcript_id "g243.t1"; gene_id "g243"; Scaffold_6 AUGUSTUS stop_codon 1074285 1074287 . + 0 transcript_id "g243.t1"; gene_id "g243"; # protein sequence = [MSLLPNRPRARSSSARPQSTTSKEKTKSNLASTPPDVIELTDSSDEDCVTTKKSSRDVTRSGHTLPRTQSTPKPLGAS # ASAENIPSSSAQRESKTKMFPHFLPSDEENVPPSRNSNLPSIIEDFVVVDLVPLKHLEGDHVEKNQLMEMQAEKNAQLSMLSQVLELGEVLEAVIHAL # FENPAYPKIDKKGKRKSTEQHHDEGGHKKPRLDEPDYSRLDREYKGGVHYSDLSIVSSVVLSFRAFNDSVVLGASHGRFSGYS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g243 ### # start gene g244 Scaffold_6 AUGUSTUS gene 1078556 1081067 0.16 - . g244 Scaffold_6 AUGUSTUS transcript 1078556 1081067 0.16 - . g244.t1 Scaffold_6 AUGUSTUS stop_codon 1078556 1078558 . - 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_6 AUGUSTUS CDS 1078556 1078784 0.99 - 1 transcript_id "g244.t1"; gene_id "g244"; Scaffold_6 AUGUSTUS CDS 1079116 1079426 0.8 - 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_6 AUGUSTUS CDS 1080819 1081067 0.26 - 0 transcript_id "g244.t1"; gene_id "g244"; Scaffold_6 AUGUSTUS start_codon 1081065 1081067 . - 0 transcript_id "g244.t1"; gene_id "g244"; # protein sequence = [MTFSQLISKGRNVSEYFAQVVKNVASQNLEIRKLVYVYVLRYAEQEPDLALLSINTFQKDLNDSNPFIRAMALRVLSG # IRVPMDVLVKLQIITLAAKLSVLNPAEQTLGLIARYIFSLARYDLNYDVRDRARVLSSLLTGVGSPVLTPDDGITPFEERGGVVLRSEQAKVVLFNGK # TNVTDDEHAGTEDVGSDNEASSEYDNDDSDEEYEDHIEGEEEDEEDEHDQQEGQSDEGNDEEEGNDDDRNSEENLKNNETGYEAFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g244 ### # start gene g245 Scaffold_6 AUGUSTUS gene 1083417 1083806 0.38 - . g245 Scaffold_6 AUGUSTUS transcript 1083417 1083806 0.38 - . g245.t1 Scaffold_6 AUGUSTUS stop_codon 1083417 1083419 . - 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_6 AUGUSTUS CDS 1083417 1083806 0.38 - 0 transcript_id "g245.t1"; gene_id "g245"; Scaffold_6 AUGUSTUS start_codon 1083804 1083806 . - 0 transcript_id "g245.t1"; gene_id "g245"; # protein sequence = [MRNEVPDAQHLKSTLRWITAQPDKRRIRSGFRYGNGSIMVSQWAKFEMYEGTDFEDGQKPILVSTPFTSISLVDGLAY # TLPTEMQGKTGGDKRAIDVNLALSSPIWEILEHDEQLKRFSSSWAGDSAQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g245 ### # start gene g246 Scaffold_6 AUGUSTUS gene 1089659 1090666 0.16 + . g246 Scaffold_6 AUGUSTUS transcript 1089659 1090666 0.16 + . g246.t1 Scaffold_6 AUGUSTUS start_codon 1089659 1089661 . + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_6 AUGUSTUS CDS 1089659 1089885 0.81 + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_6 AUGUSTUS CDS 1089961 1089997 0.32 + 1 transcript_id "g246.t1"; gene_id "g246"; Scaffold_6 AUGUSTUS CDS 1090355 1090666 0.23 + 0 transcript_id "g246.t1"; gene_id "g246"; Scaffold_6 AUGUSTUS stop_codon 1090664 1090666 . + 0 transcript_id "g246.t1"; gene_id "g246"; # protein sequence = [MSASVSPTKSNPTSPAKSTGKPASSAAAKPASKASGPKRAVTTKKVSATRKATTSNKPKVAATKSKAISNSAPKPSNA # SFFTRTRPARNAKPPSKTSGAKAPAKKAAVKKTSAPVSKKVVTKPTTTKLIAKKATAKPAAKKVLAGKPKAISTTKKTATATKRASAKKAATGTTAVS # KAKVKSNITIGITQC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g246 ### # start gene g247 Scaffold_6 AUGUSTUS gene 1092862 1094004 0.46 + . g247 Scaffold_6 AUGUSTUS transcript 1092862 1094004 0.46 + . g247.t1 Scaffold_6 AUGUSTUS start_codon 1092862 1092864 . + 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_6 AUGUSTUS CDS 1092862 1094004 0.46 + 0 transcript_id "g247.t1"; gene_id "g247"; Scaffold_6 AUGUSTUS stop_codon 1094002 1094004 . + 0 transcript_id "g247.t1"; gene_id "g247"; # protein sequence = [MEAALAKSPQESPVSYRRSPSVPYSVASIASPPPESDNEEEDSGSDDDNDNGSSTGREIDISMDVDDTSVDEEILPED # LDDDEAQFSDEWDDDNDEEVSTTWESPGPRSPSAQPPAFRVKEEPRDVQGLLDQWEYDLDLKEPLVKSEDASLPTWDWDWESGYHSYIAPSSSPSNNS # SASMSPIQSRIKQEDEFDLSLSFSGPAFTNWRQSATLSPTTPFGFTFGDESDVFPISPSAFPISPASPTPDYRTLRPRARTVPSLSLGGFLPGQTPET # PSRPTDPPITHSLSSLVHSFSLNPLDDCSPLTTFVFDRLSSEPEETESASELSTAKEQPPPCISPNDIRIGLNAPESVVVNTCEPCLPQIVATHVEGM # FVFSYTKI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g247 ### # start gene g248 Scaffold_6 AUGUSTUS gene 1096748 1097653 0.91 - . g248 Scaffold_6 AUGUSTUS transcript 1096748 1097653 0.91 - . g248.t1 Scaffold_6 AUGUSTUS stop_codon 1096748 1096750 . - 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_6 AUGUSTUS CDS 1096748 1097653 0.91 - 0 transcript_id "g248.t1"; gene_id "g248"; Scaffold_6 AUGUSTUS start_codon 1097651 1097653 . - 0 transcript_id "g248.t1"; gene_id "g248"; # protein sequence = [MSYNHPKGYILTNAVSHTRFIPFLYTFKYTTIAVFVEISALEENKLDTPLLFGYNKRWRSLCSLSSDGYLLPSSGIGK # MGFRDKVGALLQQGGCGDVLDGTSEIWMLSMPSYLGFEGINPLTVYLIYSIATPSSVFRSEDERGNRELRLVLFEVHNTFGEGHVYFMRPGIEEDSSF # KRMYDHQWTFPRAFHVSPFNDRKGWYTVSIKLPQFPDADRGIEGNPKPVISIQLREPNIEADQSEMPGQTKLIATLRATNALPLPSARNLLFTLVSYP # LELFMSMPRILYQAGILHYRRGMKNLI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g248 ### # start gene g249 Scaffold_6 AUGUSTUS gene 1098081 1099638 0.56 + . g249 Scaffold_6 AUGUSTUS transcript 1098081 1099638 0.56 + . g249.t1 Scaffold_6 AUGUSTUS start_codon 1098081 1098083 . + 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_6 AUGUSTUS CDS 1098081 1098845 0.83 + 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_6 AUGUSTUS CDS 1098937 1099638 0.58 + 0 transcript_id "g249.t1"; gene_id "g249"; Scaffold_6 AUGUSTUS stop_codon 1099636 1099638 . + 0 transcript_id "g249.t1"; gene_id "g249"; # protein sequence = [MSLSTSDNNGSYTRVPPSGKTPPPAPSAAFAKRFAIFLFFCQVQSFDFASRARELQAEQTINARYRPPALRAIASGGS # PPNDASPTVTTPGDGSTLPPTNYPAGFRRARAGTLPSNVQLAAQRFAAASSTLGSTPASTESLLEQSQRPSVTPSANLAPSRPNLRHSNTAVTSSASV # NRLRSESLTLPAAGLSNNPFSHSLFSSSWLSGNGSGNGYPVLEEMRSMTSAEVDDFDVHTLDYLGLDDTIRPQLPSPSFAFHCGLAFFSSPPAEEEEY # DAYDDQAFSRQRLSTYETSSSDNYSPASYVAKGFKQSGDLLSAPTRPRAISVGNLEEPTRTFQRRATVVDAHPYINELTQQSSGMSVMSNNLGTPGIL # QSSDKLGSVRGGTSVHFPNGETPSRASAYLLAPGATNRSLSPKSEGPSSQIQTPTRSLWIGNLDNAVTSEQLIHVFAPYGAIESLRLLPEKVSFVNQI # FNWNESHNISGVWIRQLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g249 ### # start gene g250 Scaffold_6 AUGUSTUS gene 1101105 1102316 0.54 + . g250 Scaffold_6 AUGUSTUS transcript 1101105 1102316 0.54 + . g250.t1 Scaffold_6 AUGUSTUS start_codon 1101105 1101107 . + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_6 AUGUSTUS CDS 1101105 1102316 0.54 + 0 transcript_id "g250.t1"; gene_id "g250"; Scaffold_6 AUGUSTUS stop_codon 1102314 1102316 . + 0 transcript_id "g250.t1"; gene_id "g250"; # protein sequence = [MWEVAQGRFGARSMRACLESPHITLSQQRRIATAVILNSIPLATNPNGALLLTWLLDTSGFPSRYNLLAPRFTPHLSH # LCTHKLASLTVLRIVNQKIEPEASRQIVEALFASSGDHVLTDVLGDQVNGVAVVHKILTSPFLDPMDKAVYMEATKRVLIELKVIATQAYRRLIEEVG # LPIPNYQPTYTNSVPVSGKGKNSQNSYVPGLPQGYPSNDQGLASMMAALQMGGQNPQAGPPQLHIDPAYEVAGGRPQANPQNVYNPGNDHYNSYGMRQ # PEMTSPRGSIRRTGSLPAAGTNPQNGQYSTQNGQYGAQSPSLTQGGTMLQYGGMPAQNIPAHLYQTPQYMYYAQNSPNMGPSLERRKIDITTKFTNVI # PFSSRPLSITFLPPLSIRLQTVCTWFGLFVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g250 ### # start gene g251 Scaffold_6 AUGUSTUS gene 1103501 1104918 0.22 + . g251 Scaffold_6 AUGUSTUS transcript 1103501 1104918 0.22 + . g251.t1 Scaffold_6 AUGUSTUS start_codon 1103501 1103503 . + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_6 AUGUSTUS CDS 1103501 1103729 0.23 + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_6 AUGUSTUS CDS 1103816 1104024 0.33 + 2 transcript_id "g251.t1"; gene_id "g251"; Scaffold_6 AUGUSTUS CDS 1104152 1104258 0.81 + 0 transcript_id "g251.t1"; gene_id "g251"; Scaffold_6 AUGUSTUS CDS 1104345 1104918 0.82 + 1 transcript_id "g251.t1"; gene_id "g251"; Scaffold_6 AUGUSTUS stop_codon 1104916 1104918 . + 0 transcript_id "g251.t1"; gene_id "g251"; # protein sequence = [MFKLRPLGSARRPSSSTATSLKNWRTQSRQRLAVTSAVVVVSVLAYSGLKHTVIQNDSLPPASFKHEYSTEQPKGPHL # TSCFSSQKLLPDNSKSEVIQSPTTAKWLDNVALRDLALHKEYAACVDARGDVYQWGQGGQPSPVLKGQTRCHGPNKTRSHGHNYLGGKLGGYGAEKSS # VLPKRLFISISAGTDHLLGLTSSGRAFAHPITNSANAYGQLGFRKFDMSSPDSKERIPVELVPRSVADPYAKASPFRRRDSQSGVTSEKTNTAVTLPF # CPSIFEIPSLQSIKVSQLVAGGRSSFALTATGRVLGWGANEYGYAHIRFRCRHWLMLEFSQIGLGDNITLDTITVPTEVILWRMAQGTQTKCVNVTAG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g251 ### # start gene g252 Scaffold_6 AUGUSTUS gene 1107197 1107936 0.29 - . g252 Scaffold_6 AUGUSTUS transcript 1107197 1107936 0.29 - . g252.t1 Scaffold_6 AUGUSTUS stop_codon 1107197 1107199 . - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_6 AUGUSTUS CDS 1107197 1107302 0.85 - 1 transcript_id "g252.t1"; gene_id "g252"; Scaffold_6 AUGUSTUS CDS 1107355 1107499 0.67 - 2 transcript_id "g252.t1"; gene_id "g252"; Scaffold_6 AUGUSTUS CDS 1107591 1107789 0.48 - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_6 AUGUSTUS CDS 1107934 1107936 0.3 - 0 transcript_id "g252.t1"; gene_id "g252"; Scaffold_6 AUGUSTUS start_codon 1107934 1107936 . - 0 transcript_id "g252.t1"; gene_id "g252"; # protein sequence = [MYLSTVQMAPLQNTVLYSANSYPNFYWTEERNTTEWNVFMSEMTRAGNKLQELMLEALVPSLKDAHLANPATYLNGTA # ALNITGCAHSCVYQLNESTADTGICTIANGTDRDSFLWYDELHPSEQTERNIAREIAEVIEGKQNQWTRWLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g252 ### # start gene g253 Scaffold_6 AUGUSTUS gene 1110398 1111515 0.53 + . g253 Scaffold_6 AUGUSTUS transcript 1110398 1111515 0.53 + . g253.t1 Scaffold_6 AUGUSTUS start_codon 1110398 1110400 . + 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_6 AUGUSTUS CDS 1110398 1111007 0.55 + 0 transcript_id "g253.t1"; gene_id "g253"; Scaffold_6 AUGUSTUS CDS 1111049 1111515 0.54 + 2 transcript_id "g253.t1"; gene_id "g253"; Scaffold_6 AUGUSTUS stop_codon 1111513 1111515 . + 0 transcript_id "g253.t1"; gene_id "g253"; # protein sequence = [MSRRGTTPNPLPLGSFSSHFAQLTSQSQPVQKQSQARPNTLAPRASPLARSPSGLNSANVLSVEEWETKAPLNDLQIR # SVAAVKKASEIKRVPDKVRYIYRLRVIFQFDSLVPPSLILLVMKKIPRLVPLLRSQKGSYHPPSHQERQVPARDLEHRLALGQLAINFIPNPLHTPQQ # FYDWHALISRSVTHAQESIFAHISIQFHQVEDEITSMHFQWQGVEDGGRSLKESSEGLLIERDSLLKLESELGERLDYFKELEYATRMLNASVLEGSA # GKGGRPLVMEFEFLDMVERVVICIQWLEAHRHYREAEIYLLRFHQCLTRAMTLIKMYFVGSLRAVQADVARRFGDKVCSSTNLA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g253 ### # start gene g254 Scaffold_6 AUGUSTUS gene 1112151 1113995 0.12 + . g254 Scaffold_6 AUGUSTUS transcript 1112151 1113995 0.12 + . g254.t1 Scaffold_6 AUGUSTUS start_codon 1112151 1112153 . + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS CDS 1112151 1112466 0.7 + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS CDS 1112520 1112683 0.94 + 2 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS CDS 1112733 1113096 0.47 + 0 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS CDS 1113146 1113289 0.42 + 2 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS CDS 1113334 1113995 0.99 + 2 transcript_id "g254.t1"; gene_id "g254"; Scaffold_6 AUGUSTUS stop_codon 1113993 1113995 . + 0 transcript_id "g254.t1"; gene_id "g254"; # protein sequence = [MILDVRVDDDGESENDSADVEEKLGLDLNLDPTLRTPDPNSSALGHLKPRLHIAQLLQMILQDAQTRLFFKAQAIVQS # DIRHYVAKDDDLAYPARLLNAVGLSDSLLRDRANEKESFSQMWSTQLGSDKDHGASLDNQQTWFPTLRKTILVLEQLHEFVNPAIFEDIAEEAIVLCQ # SSLVAASENIVNSASSSSNRLAPLSETANTASLTSEPIARSTLLDGYLFLVRHLLILREVPVRFGLITESTDNSANTNAARTTDWGALSGPGPQKVGV # GTSNSVTDTLASIFGGGSAASLLATLGVLPSDFGDAVAGRPDSKRTIDNAKRVIVFDQSVSSISMREHYCTCTNEVCEPLRMWVERVGAFSATSVSSK # GDFHTSPSATMNISVSSSNQSVGSKDVKGMPDWASPASASEVDHNFKMACEEKLLLAVRKIRLYLGGVETGEEENKNLNNINGNIHDGEKRPVSSPNT # SARALSNVIVQHVQERIGEEYAWFRDVMWGMSTDAGTSDKTGVSALYTEEQVKELQELRERILDQRTLKAMLKGITEGQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g254 ### # start gene g255 Scaffold_6 AUGUSTUS gene 1114938 1115461 0.85 - . g255 Scaffold_6 AUGUSTUS transcript 1114938 1115461 0.85 - . g255.t1 Scaffold_6 AUGUSTUS stop_codon 1114938 1114940 . - 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_6 AUGUSTUS CDS 1114938 1115358 1 - 1 transcript_id "g255.t1"; gene_id "g255"; Scaffold_6 AUGUSTUS CDS 1115442 1115461 0.85 - 0 transcript_id "g255.t1"; gene_id "g255"; Scaffold_6 AUGUSTUS start_codon 1115459 1115461 . - 0 transcript_id "g255.t1"; gene_id "g255"; # protein sequence = [MQADTMEDIPSSDYAAPAAIIPAKFRTTCSRLFNVPAVAEGAALEEAAEEELAKDELVEKKLELELNEEDDEDEDDED # HDEEDEDQELDVLEGVQVVVGVVEVGVAVVESGVQVDEGVYTLVEVGVYTEDEEEESPLLPSLNDQVP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g255 ### # start gene g256 Scaffold_6 AUGUSTUS gene 1119101 1119547 1 - . g256 Scaffold_6 AUGUSTUS transcript 1119101 1119547 1 - . g256.t1 Scaffold_6 AUGUSTUS stop_codon 1119101 1119103 . - 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_6 AUGUSTUS CDS 1119101 1119547 1 - 0 transcript_id "g256.t1"; gene_id "g256"; Scaffold_6 AUGUSTUS start_codon 1119545 1119547 . - 0 transcript_id "g256.t1"; gene_id "g256"; # protein sequence = [MTAASSISKTPDGTTAVGVADVVLVVAVLEVENDNNDEDEDVNVDVNEDVDEDVDGEVEDNKVDELLRVLVEVGVQVL # VEDVDGGGDQVEVGGVYVEVGVAEVEVAPESKFQDPVRTPSSSEAKYWNRPSEKSRPPYGHPGHCVEAET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g256 ### # start gene g257 Scaffold_6 AUGUSTUS gene 1120677 1121616 0.28 - . g257 Scaffold_6 AUGUSTUS transcript 1120677 1121616 0.28 - . g257.t1 Scaffold_6 AUGUSTUS stop_codon 1120677 1120679 . - 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_6 AUGUSTUS CDS 1120677 1120964 0.94 - 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_6 AUGUSTUS CDS 1121110 1121616 0.28 - 0 transcript_id "g257.t1"; gene_id "g257"; Scaffold_6 AUGUSTUS start_codon 1121614 1121616 . - 0 transcript_id "g257.t1"; gene_id "g257"; # protein sequence = [MSVLVKSDQVGSLFVKGAPESVLERCTSILVDGKIIPFTPEIKESLLQTTVTYGGHGLRNLALAYRDVQDTDAAHYQS # ESTRDYSRFEQNLTFVSIVGMLDPPRPEVRPAVANCKAAGIRVVCITGDNKRTAETICRQIGIFDEDEDLTGKSYTGRELDDLSHEEKIAATGDGVND # APALKKADIGVAMGSGTDVAKLAADMVLADSNFATIEGAVEEGRLIYNNTKQFIRYLSKSHISLGACAMGRNTYRLTVVSSNIGEVVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g257 ### # start gene g258 Scaffold_6 AUGUSTUS gene 1124152 1124415 0.9 - . g258 Scaffold_6 AUGUSTUS transcript 1124152 1124415 0.9 - . g258.t1 Scaffold_6 AUGUSTUS stop_codon 1124152 1124154 . - 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_6 AUGUSTUS CDS 1124152 1124415 0.9 - 0 transcript_id "g258.t1"; gene_id "g258"; Scaffold_6 AUGUSTUS start_codon 1124413 1124415 . - 0 transcript_id "g258.t1"; gene_id "g258"; # protein sequence = [MSNELDDILCKTLTRKHIGHSVAPLYTAASGLLGSFRVFGRFEWLDDLEEIDEAERGSDREADSSPPSESGSSFLAAK # IWSSVQESS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g258 ### # start gene g259 Scaffold_6 AUGUSTUS gene 1124945 1126087 0.82 + . g259 Scaffold_6 AUGUSTUS transcript 1124945 1126087 0.82 + . g259.t1 Scaffold_6 AUGUSTUS start_codon 1124945 1124947 . + 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_6 AUGUSTUS CDS 1124945 1126087 0.82 + 0 transcript_id "g259.t1"; gene_id "g259"; Scaffold_6 AUGUSTUS stop_codon 1126085 1126087 . + 0 transcript_id "g259.t1"; gene_id "g259"; # protein sequence = [MRQVGDRLIPVGVTSGRVLALSPEEAASAASGGDNGGGSWRPRRRQQGGNGLEQYLGQDLEEVRSDDCSCLLLTSFRF # LMMQIMMMEAMRLSLLEHEAQQRKEAEEKKKADAQANKVTDDNETNETVASSTSSNGASTSSAPNLNSIDLSSTSPLSSSSSSTPAQQKNDSLRVKRG # SLFNRSRSPSPAPPSSQSSLQNTPPFSTLGAALSTASTASAILRSSSSTSASSDPSPEKSSQAPLLAKEATSPSTIESASTSSLPSNTSSSTTSPVPP # SITIAPVPPSAPIFLPPASPTPLESHSASKRPPSINTPFGDNDSSYENLPSSPEEIPEETPCEPLIPKDGTKMETELKSDPEAPVGSSERNQYQERLS # GPSASISQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g259 ### # start gene g260 Scaffold_6 AUGUSTUS gene 1127878 1129322 0.31 - . g260 Scaffold_6 AUGUSTUS transcript 1127878 1129322 0.31 - . g260.t1 Scaffold_6 AUGUSTUS stop_codon 1127878 1127880 . - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_6 AUGUSTUS CDS 1127878 1128639 1 - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_6 AUGUSTUS CDS 1128714 1129322 0.31 - 0 transcript_id "g260.t1"; gene_id "g260"; Scaffold_6 AUGUSTUS start_codon 1129320 1129322 . - 0 transcript_id "g260.t1"; gene_id "g260"; # protein sequence = [MHITAAYLDRVVTKPKGLALQYTVWAPREPIGPTDLLPISIHVLPKERNISIRSATVVVERRIQFNESQSPVSASASS # AIPISPTLSVSSFMTYSPASQNFPVSSRSFSTMTSPQSGYPSSVSLASDVRPLLPQPQYSRDRSDSSESLVGKPIVLPIAASESSGPFSQAENGIWSK # TLTVQWPSAKPSSRWGIGETIHSDLVSIIVTGPHSTESFELDEEEIFTTSTNDAERRLAISKTRSQSSSEARSKSKSPRRTRRKLEDSPEPVPSTSTS # GLKPPPHPRVPPSPTSSSSKRKDSIPRRPHTSAGPRDSSSSHFSTPKVSLETVPIPSNSSLDTAASNKKRPATTSIIGGSSDIQTTQNIHAFSPIISL # SSTPSTSSGSGSSTLESTEGHKDESSSAAVREWEAELAKIELKSRRSSDLLGFKFKRKRPSVLSTVAGSRCGSVGNTKHPMVQT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g260 ### # start gene g261 Scaffold_6 AUGUSTUS gene 1132512 1133419 0.4 + . g261 Scaffold_6 AUGUSTUS transcript 1132512 1133419 0.4 + . g261.t1 Scaffold_6 AUGUSTUS start_codon 1132512 1132514 . + 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_6 AUGUSTUS CDS 1132512 1132647 0.44 + 0 transcript_id "g261.t1"; gene_id "g261"; Scaffold_6 AUGUSTUS CDS 1132737 1133419 0.65 + 2 transcript_id "g261.t1"; gene_id "g261"; Scaffold_6 AUGUSTUS stop_codon 1133417 1133419 . + 0 transcript_id "g261.t1"; gene_id "g261"; # protein sequence = [MEPGPSTRNAQMPFDNFTRTQGSFSSSLVSKPDTVVWQMPPPSNPVSRINPPPSESNWNFLPSVVATDAVGSSSRPST # RLLDKRLHSITSFEINPAIAKLVDPVMLKGVADAANQKAQERSRTLGLVMKRRKSTPKSTKAEKSTTGKSRASRAVNSGMIEKSRNVPKRKEKERGKT # KEISGSSLLQKSWTRECSTFKRPVFDDSFSITSSSTSSPEVLDDSMSIDETNSPDTSLMSPSPPLLTTRLPNPHTPYPYLLKFRTHLLSTAGVNPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g261 ### # start gene g262 Scaffold_6 AUGUSTUS gene 1133588 1133926 0.88 + . g262 Scaffold_6 AUGUSTUS transcript 1133588 1133926 0.88 + . g262.t1 Scaffold_6 AUGUSTUS start_codon 1133588 1133590 . + 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_6 AUGUSTUS CDS 1133588 1133926 0.88 + 0 transcript_id "g262.t1"; gene_id "g262"; Scaffold_6 AUGUSTUS stop_codon 1133924 1133926 . + 0 transcript_id "g262.t1"; gene_id "g262"; # protein sequence = [MRRVNSFPAKNVRLIDNIGVVRDLPTKQRPFKTPFLPTTQRSNTGQALAVNATYPKTEKSPVSRMNDVHREAFAHTIE # ETEPHGMVCDDAETSYEHDSFDMDALEETLKQYD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g262 ### # start gene g263 Scaffold_6 AUGUSTUS gene 1137001 1137696 0.24 + . g263 Scaffold_6 AUGUSTUS transcript 1137001 1137696 0.24 + . g263.t1 Scaffold_6 AUGUSTUS start_codon 1137001 1137003 . + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_6 AUGUSTUS CDS 1137001 1137696 0.24 + 0 transcript_id "g263.t1"; gene_id "g263"; Scaffold_6 AUGUSTUS stop_codon 1137694 1137696 . + 0 transcript_id "g263.t1"; gene_id "g263"; # protein sequence = [MVALQKELSLYQFIKIPEVPTFTGGAIGYVAYDCIQHFEPKTACELKDPLNIPEAVFMLADTLVIYDHIFQTIKVVSH # VFMPSDAGKNNLSFVYQTAVDKARRLAKVLITSSTPEPVQPPIVSGNEAVSNVGKQGYEGFVTTLKKHIVAGDIIQAVPSQRLARPTSLHPFNAYRHL # RQVNPSPYMFYLDCGDLQIVGASPETLCKVEKNIVYNHAIAGTTKRGKTPEGRSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g263 ### # start gene g264 Scaffold_6 AUGUSTUS gene 1138448 1139209 0.97 - . g264 Scaffold_6 AUGUSTUS transcript 1138448 1139209 0.97 - . g264.t1 Scaffold_6 AUGUSTUS stop_codon 1138448 1138450 . - 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_6 AUGUSTUS CDS 1138448 1139209 0.97 - 0 transcript_id "g264.t1"; gene_id "g264"; Scaffold_6 AUGUSTUS start_codon 1139207 1139209 . - 0 transcript_id "g264.t1"; gene_id "g264"; # protein sequence = [MSQYGSTQTSQWSLRDSLHRPTKDATLSALLASGAHFGHASSRMNPNFLPYAYGTRAGITLIDLDHTLPLLRRAAKVV # RAVAANDGQIVFIGTRADIRPVVQKAAQRLGTQGFHVGDRWLPGTLTNKWQMFGHETVRSKRIVPDLVILLNPIQNMNAIQECALSNVPTIAIVDSNV # DPRIVMYPIPANDESPRTAEIIAGVLSIAGREGIAIREAETQRMRMAVDSAWEDFNKMQVMQDARQPQRSDAEAFDY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g264 ### # start gene g265 Scaffold_6 AUGUSTUS gene 1140041 1140723 0.96 + . g265 Scaffold_6 AUGUSTUS transcript 1140041 1140723 0.96 + . g265.t1 Scaffold_6 AUGUSTUS start_codon 1140041 1140043 . + 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_6 AUGUSTUS CDS 1140041 1140216 0.97 + 0 transcript_id "g265.t1"; gene_id "g265"; Scaffold_6 AUGUSTUS CDS 1140279 1140723 0.99 + 1 transcript_id "g265.t1"; gene_id "g265"; Scaffold_6 AUGUSTUS stop_codon 1140721 1140723 . + 0 transcript_id "g265.t1"; gene_id "g265"; # protein sequence = [MIHWPFEVTEKDGSPLIKVSYLGEEKTFSPQEISSMVLTKMKEVSEAKLGKTVKKAVVTVPAYFNDSQRLATKDAGAI # AGLDVLRIINEPTAAAIAYDRQSKTEKNVLIFDLGGGTFDVSLLNISGGVFAVKATAGDTHLGGEDFDNTLLEHFKNEFKRKSKLDISDDARALRRLR # SACERAKRTLSSVTQTTVEVDSLYQVSSTI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g265 ### # start gene g266 Scaffold_6 AUGUSTUS gene 1140815 1141831 0.11 + . g266 Scaffold_6 AUGUSTUS transcript 1140815 1141831 0.11 + . g266.t1 Scaffold_6 AUGUSTUS start_codon 1140815 1140817 . + 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_6 AUGUSTUS CDS 1140815 1141129 0.33 + 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_6 AUGUSTUS CDS 1141290 1141428 0.37 + 0 transcript_id "g266.t1"; gene_id "g266"; Scaffold_6 AUGUSTUS CDS 1141503 1141831 0.56 + 2 transcript_id "g266.t1"; gene_id "g266"; Scaffold_6 AUGUSTUS stop_codon 1141829 1141831 . + 0 transcript_id "g266.t1"; gene_id "g266"; # protein sequence = [MFKSTLDPVEKVLKDAKMAREKVDDIVLVGGSTRIPKIQALVSEYFGGRQLNKSINPDEAVAYGAAVQAAVLTGQTSD # QTKDLLLLDVAPLSLGVAMQGDVFGCVCRDNRLLGEFELTGIPPMPRGQAELVTTFEIDANGLLKVSAQDRSSAITNSVGRLSSAEIDQMIKDAEQFK # MADKEFTARHEAKSDLEAYIQQVESTITSPEIGMKLKRGAKSQVEAELARALEKLEIVDSTADELKKAQLGIKRALQKATAGIR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g266 ### # start gene g267 Scaffold_6 AUGUSTUS gene 1142170 1142856 0.46 + . g267 Scaffold_6 AUGUSTUS transcript 1142170 1142856 0.46 + . g267.t1 Scaffold_6 AUGUSTUS start_codon 1142170 1142172 . + 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_6 AUGUSTUS CDS 1142170 1142856 0.46 + 0 transcript_id "g267.t1"; gene_id "g267"; Scaffold_6 AUGUSTUS stop_codon 1142854 1142856 . + 0 transcript_id "g267.t1"; gene_id "g267"; # protein sequence = [MMDPEDDYNTIVEAEQKIKASRVQREKEIEEAHANMKGASSIQIPEKIAYILEALSKTLEAAKQSAKRPKSVPSAETH # AATVNELDNSKLSLAKSISDAENMLASQEAELAALKAECQSLEHYDPATEHEKDLDGTACVVVCPDSNICYSIVITSLRLKIYRGMGFDIALDDKNQV # SNVLIRMFYACAPVKYNHPSSGSQSGDVHSVPLNVDKSPADYTRHLWKLAAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g267 ### # start gene g268 Scaffold_6 AUGUSTUS gene 1144546 1146312 0.23 - . g268 Scaffold_6 AUGUSTUS transcript 1144546 1146312 0.23 - . g268.t1 Scaffold_6 AUGUSTUS stop_codon 1144546 1144548 . - 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_6 AUGUSTUS CDS 1144546 1144981 0.91 - 1 transcript_id "g268.t1"; gene_id "g268"; Scaffold_6 AUGUSTUS CDS 1145770 1145915 1 - 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_6 AUGUSTUS CDS 1145977 1146312 0.49 - 0 transcript_id "g268.t1"; gene_id "g268"; Scaffold_6 AUGUSTUS start_codon 1146310 1146312 . - 0 transcript_id "g268.t1"; gene_id "g268"; # protein sequence = [MPITSDKVFSPSDHADLKTLFVDLNEEWKISKFETTPLMSSYLVAFANGPFEYLESFAKMPLSGRTIPLRIYATKDLI # HQAQFALDVKAKVLPLYEQVFEVEYPLPKLDTLVANDFDAGAMENWGLITGRTSALLLDPKKADLAAKKRVVVVQSHEVAHMCVTNDLWAGISKSTGT # DIINFMDNWVKKVRPTPETYGRLVDLPLTYLQIGFPVVTVTETSGGIKVRQDRFLETGLAEGKDNETIWNIPLSILTFDASGKTIIDKTAVLDSREST # FALDTSKPYKLNAGTNGVCECHSFDYTGSKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g268 ### # start gene g269 Scaffold_6 AUGUSTUS gene 1148304 1148798 0.64 + . g269 Scaffold_6 AUGUSTUS transcript 1148304 1148798 0.64 + . g269.t1 Scaffold_6 AUGUSTUS start_codon 1148304 1148306 . + 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_6 AUGUSTUS CDS 1148304 1148798 0.64 + 0 transcript_id "g269.t1"; gene_id "g269"; Scaffold_6 AUGUSTUS stop_codon 1148796 1148798 . + 0 transcript_id "g269.t1"; gene_id "g269"; # protein sequence = [MSSPTSASDLESQVHKGKEVVQIVELGEEEKKYEVDLEPNEHPQQHTSFKKWTVILVVATSALCVTCASSAVRSALHV # QNHAYQRSCQASFTEAGIAAEFHVPHEVTILSITFFVAGLGIGPLLTGPLSEVYGRNIIYRVSYILLCAFTFGVAFAPDIGEFWPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g269 ### # start gene g270 Scaffold_6 AUGUSTUS gene 1151057 1152210 0.23 + . g270 Scaffold_6 AUGUSTUS transcript 1151057 1152210 0.23 + . g270.t1 Scaffold_6 AUGUSTUS start_codon 1151057 1151059 . + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_6 AUGUSTUS CDS 1151057 1151563 0.55 + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_6 AUGUSTUS CDS 1151662 1152210 0.41 + 0 transcript_id "g270.t1"; gene_id "g270"; Scaffold_6 AUGUSTUS stop_codon 1152208 1152210 . + 0 transcript_id "g270.t1"; gene_id "g270"; # protein sequence = [MPFDPVRDAVLNSPATEGLPTSPSLARRATHLSVLLNSDSEPLPRPSSSLPQSLHFEPTDKLVFSKPLKKAHDKSVSL # SNSRPSSSSSFLPTSTDFPVMRSSPLLYNPTHRLTPPTSILTPMSKAEMEMYKSYVGKGTARLTKRKRPRDDSDTADEPPVKKYTGRSGVVRLDSPII # GLKNFNNWVKSVLISKFAHPALAASSVRTQKNKGKVLDLGCGKGGDITKWSKAKISDYVGAGVLPSSNLFLRWLIFSSDIAAISVEQAQERWETNRNA # SRFQASFATYDFCTQNLEDVFNPDILAKPFDVVSSQFCIHYAFEKEETVRRMFRKCQSLAETRRYVYWNNTQRRATT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g270 ### # start gene g271 Scaffold_6 AUGUSTUS gene 1153493 1155518 0.32 - . g271 Scaffold_6 AUGUSTUS transcript 1153493 1155518 0.32 - . g271.t1 Scaffold_6 AUGUSTUS stop_codon 1153493 1153495 . - 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_6 AUGUSTUS CDS 1153493 1153824 0.74 - 2 transcript_id "g271.t1"; gene_id "g271"; Scaffold_6 AUGUSTUS CDS 1153865 1154139 0.95 - 1 transcript_id "g271.t1"; gene_id "g271"; Scaffold_6 AUGUSTUS CDS 1154194 1155518 0.48 - 0 transcript_id "g271.t1"; gene_id "g271"; Scaffold_6 AUGUSTUS start_codon 1155516 1155518 . - 0 transcript_id "g271.t1"; gene_id "g271"; # protein sequence = [MLTLDLKKSNDNLVVHGKLIIYLSTNVTQPIPNPGPSQVNGLSSALADMGLNNTNSPGASTSNLVLPTNPSGTLSRTT # SSHATATDITASPAVVAPSSAPSTETEQPSPQIVAAPSSSRPTSISGTNPSANNAAPANPMNPSATAGNANQMRNFNPNVDQYGRLPPGWERRIDPLG # RTYYVDHNTRTTTWNRPSDSAAVNNDVQDSETNAARDQHSRRILADDLLEANNSNNSTSNVFRNSTATVNATANPAPAALTTGSNATTAGSGSLPNGW # EERFTLEGRPYYVDHNTRTTTWVDPRRQAIIRVMGPNGQGSSLQPQAISQLGPLPSGWEMRLTSTARVYFVDHNTKTTTWDDPRLPSTLDANVPQYKR # DFRRKLIYFRSQPAMRAQPGNCQIKIRRNHIFEDSYAEIMRQTPNDLKKRLMIKFDGEDGLDYGVFPGTLEFFFLLSHEMFNPFYCLFEYSAHDNYTL # QINPASGVNPEHLNYFKFIGRCLGLGIFHRRFLDAYFIVSFYKMILKKKVTLADLESVDTELHLRSYNKADSFLCSENDITDIIDTSFTTTEERFGEM # VTIELKPGGEDIPVTEDNKKDYVECIVDYRISKRVKEQFDAFMSGFSELIPQDLITVFDERELELLIGGMSEIDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g271 ### # start gene g272 Scaffold_6 AUGUSTUS gene 1158692 1159597 0.68 + . g272 Scaffold_6 AUGUSTUS transcript 1158692 1159597 0.68 + . g272.t1 Scaffold_6 AUGUSTUS start_codon 1158692 1158694 . + 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_6 AUGUSTUS CDS 1158692 1159597 0.68 + 0 transcript_id "g272.t1"; gene_id "g272"; Scaffold_6 AUGUSTUS stop_codon 1159595 1159597 . + 0 transcript_id "g272.t1"; gene_id "g272"; # protein sequence = [MPGCEIGERASKRKTLEPTPQREIAETRPMKEYRERNLQNAPSRTRTSLTGLLMHLSSSPYSHRNTGGLSKFRLNLGN # AIESIEQSGVNPIFPKKLWKSVLRDEYIELSEVHALGATDYIPKAPQPASNKFAALKSSTFAKPASTKAITDQASWRRAWRATADAISFAFADRRNEL # SAYEEHVGRLFDDNLPSFHHNVINYDKAVRQLIGSRRDILFDEFEHSEVARIRNMYLLPTGTHFSTSTFPAPRANQASLHPRNRAREICRKFNRGNCD # GCERKHICATCSESGHGSHNCRKTSWK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g272 ### # start gene g273 Scaffold_6 AUGUSTUS gene 1164677 1165264 0.84 + . g273 Scaffold_6 AUGUSTUS transcript 1164677 1165264 0.84 + . g273.t1 Scaffold_6 AUGUSTUS start_codon 1164677 1164679 . + 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_6 AUGUSTUS CDS 1164677 1165264 0.84 + 0 transcript_id "g273.t1"; gene_id "g273"; Scaffold_6 AUGUSTUS stop_codon 1165262 1165264 . + 0 transcript_id "g273.t1"; gene_id "g273"; # protein sequence = [MFIKFAEEYLAVLRSEQEQLDSVVKEQNLSPEEATRMTTEYEMLSRNIEDLKQKIADTEQTVMSLEVSLTNRISGTEE # TLHIYNVALSTLGLLPPLPPPHNDIDLTLELNTASSDHSQLLSGLDIRKVIKPTLNSIAESKRSTRAEVENERIRVDNEIEQLTLECDTGEDEISQLE # KQVAAVNEQAIDLHNVYVN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g273 ### # start gene g274 Scaffold_6 AUGUSTUS gene 1174803 1175873 0.61 + . g274 Scaffold_6 AUGUSTUS transcript 1174803 1175873 0.61 + . g274.t1 Scaffold_6 AUGUSTUS start_codon 1174803 1174805 . + 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_6 AUGUSTUS CDS 1174803 1175382 0.62 + 0 transcript_id "g274.t1"; gene_id "g274"; Scaffold_6 AUGUSTUS CDS 1175491 1175873 0.97 + 2 transcript_id "g274.t1"; gene_id "g274"; Scaffold_6 AUGUSTUS stop_codon 1175871 1175873 . + 0 transcript_id "g274.t1"; gene_id "g274"; # protein sequence = [MKTYCPVSVRDLMKQLSEVEVFGDTSSVRKIHNKLSDRILIPGKVFIFDEDSRPGYYGTWTRSSRLIGARTPFAKDVL # ELDYGYDSGEDWEEEPAGDADDVMDDAEDDAATEDQDSDIDDWLVEDDEVEEDIPADERAGSPIFNPLPKRRADDAPPQTVKKRKVVVPLVPFAKGPC # WENSIGQNESMFDPFRILEEQKSVRASEKGFAVPALPNHIVQASTAKGSDTGSSPAPVVAPSGPKKPAFTPKTAFPDEHLPILLSKINTAQAANLTVL # VEAVSQELREHKVKKNAIEAKIREVGEKCKVRKFWVVKENHPVGIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g274 ### # start gene g275 Scaffold_6 AUGUSTUS gene 1178867 1179802 0.79 - . g275 Scaffold_6 AUGUSTUS transcript 1178867 1179802 0.79 - . g275.t1 Scaffold_6 AUGUSTUS stop_codon 1178867 1178869 . - 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_6 AUGUSTUS CDS 1178867 1179802 0.79 - 0 transcript_id "g275.t1"; gene_id "g275"; Scaffold_6 AUGUSTUS start_codon 1179800 1179802 . - 0 transcript_id "g275.t1"; gene_id "g275"; # protein sequence = [MYVFQLMEYWFPNLICHLDHSKNNSAPQSHSSTSLPPPPHQTLQHPFTGALHSTNKMPTFSQSSYMFSTPPPPSIIQT # HPSQDDPAIDLGDAFEAAQHILKALNFGVDLSKVPQEAEAGSTFSPPVPNSQSITGAVTVDVANPSITGGMNPDGVRAELQVQLVLLAAQLSEMASVP # SEITSASSAVLITASTSAGNEGASYGDASSQSLLATSPAPVSYSDRPNSKADTGGTLPQAAPPETPRDARSFSEAQSKVAALPPNGQIHVPQCLRLHQ # HRRRKSFRCTMLMILTTMIWTRLLCSSCCVAALAILG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g275 ### # start gene g276 Scaffold_6 AUGUSTUS gene 1189402 1189888 0.41 - . g276 Scaffold_6 AUGUSTUS transcript 1189402 1189888 0.41 - . g276.t1 Scaffold_6 AUGUSTUS stop_codon 1189402 1189404 . - 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_6 AUGUSTUS CDS 1189402 1189815 0.42 - 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_6 AUGUSTUS CDS 1189871 1189888 0.47 - 0 transcript_id "g276.t1"; gene_id "g276"; Scaffold_6 AUGUSTUS start_codon 1189886 1189888 . - 0 transcript_id "g276.t1"; gene_id "g276"; # protein sequence = [MSHYPEADEAQHRHYNDGYLPHTSGTPSPYEHYDQPLTQASQFDPYGVSTAGPYAQQPAASNYYGGPVDAYGAPIHSP # PPGGYHPTSPPPPNVLPPFGAPIHSPPVHDYLSSPPPQNAYPTSYGLRDEGFTPRPNYGDGTSLT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g276 ### # start gene g277 Scaffold_6 AUGUSTUS gene 1195306 1195657 0.62 - . g277 Scaffold_6 AUGUSTUS transcript 1195306 1195657 0.62 - . g277.t1 Scaffold_6 AUGUSTUS stop_codon 1195306 1195308 . - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_6 AUGUSTUS CDS 1195306 1195425 0.91 - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_6 AUGUSTUS CDS 1195481 1195657 0.65 - 0 transcript_id "g277.t1"; gene_id "g277"; Scaffold_6 AUGUSTUS start_codon 1195655 1195657 . - 0 transcript_id "g277.t1"; gene_id "g277"; # protein sequence = [MVQLTAVFLFASVLTIAMGTPLIKRDMATIQADITNISSLLVTWDNDVNAFAGTTDGAAAIHDDSVALESAFNTAITD # TQVYSSTIPSTLNYPDCKNP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g277 ### # start gene g278 Scaffold_6 AUGUSTUS gene 1218544 1220213 0.29 - . g278 Scaffold_6 AUGUSTUS transcript 1218544 1220213 0.29 - . g278.t1 Scaffold_6 AUGUSTUS stop_codon 1218544 1218546 . - 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_6 AUGUSTUS CDS 1218544 1218873 0.84 - 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_6 AUGUSTUS CDS 1218995 1219352 0.47 - 1 transcript_id "g278.t1"; gene_id "g278"; Scaffold_6 AUGUSTUS CDS 1219466 1219889 0.64 - 2 transcript_id "g278.t1"; gene_id "g278"; Scaffold_6 AUGUSTUS CDS 1220006 1220213 0.79 - 0 transcript_id "g278.t1"; gene_id "g278"; Scaffold_6 AUGUSTUS start_codon 1220211 1220213 . - 0 transcript_id "g278.t1"; gene_id "g278"; # protein sequence = [MPPKTQLKSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTTLPEAMEENNNSSTAPSIARRTGKQ # PQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGAEIQHDLDDDSGGLPRGEPGDPSGPGGPGGPGGPGGPGGPRSPISPDIPNEQRAMLELLSG # FKGSIETLGTVLAALGRPSDSSGIRARSRSRGIRRGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRK # YNIRFNTLAASTNWDSAALKWAYGRGLAERIKDEMARLPEPATLADYRQEVLRLTIPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQSGGQRPAF # NHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEDSEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g278 ### # start gene g279 Scaffold_6 AUGUSTUS gene 1229135 1229806 0.53 + . g279 Scaffold_6 AUGUSTUS transcript 1229135 1229806 0.53 + . g279.t1 Scaffold_6 AUGUSTUS start_codon 1229135 1229137 . + 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_6 AUGUSTUS CDS 1229135 1229806 0.53 + 0 transcript_id "g279.t1"; gene_id "g279"; Scaffold_6 AUGUSTUS stop_codon 1229804 1229806 . + 0 transcript_id "g279.t1"; gene_id "g279"; # protein sequence = [MHSYRALIPYVTLALTLAANASPVGYYSNTYATREVSSPETYDMRDIFSPAEDFPKARDSGNLLLREVPTVPNGHPPP # YEEAIAAPHSTAEKTPPKIDTIEKAPPKIDTIEKPVDPTKVEPKPPAAPVPSGVVKGTKTGWTSKINPKVKEYAKNTAIVGVSAAALGGALGGLLWAV # SGSCTGPDHNPERRSEFFLFPFPFITITQIVCRPLRWCALLIQDGDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g279 ### # start gene g280 Scaffold_6 AUGUSTUS gene 1230038 1230379 0.44 + . g280 Scaffold_6 AUGUSTUS transcript 1230038 1230379 0.44 + . g280.t1 Scaffold_6 AUGUSTUS start_codon 1230038 1230040 . + 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_6 AUGUSTUS CDS 1230038 1230379 0.44 + 0 transcript_id "g280.t1"; gene_id "g280"; Scaffold_6 AUGUSTUS stop_codon 1230377 1230379 . + 0 transcript_id "g280.t1"; gene_id "g280"; # protein sequence = [MDSTDFFSFLHGAPAESEKNDMDEEMEEVDPLETLPQKRKATESFSKLPDDSSSSKKAKMEATPATESISNPVVLDDF # ETEAKREVAASAGLTGGVEAGSRLELRHQVRFSNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g280 ### # start gene g281 Scaffold_6 AUGUSTUS gene 1231410 1232099 0.72 + . g281 Scaffold_6 AUGUSTUS transcript 1231410 1232099 0.72 + . g281.t1 Scaffold_6 AUGUSTUS start_codon 1231410 1231412 . + 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_6 AUGUSTUS CDS 1231410 1232099 0.72 + 0 transcript_id "g281.t1"; gene_id "g281"; Scaffold_6 AUGUSTUS stop_codon 1232097 1232099 . + 0 transcript_id "g281.t1"; gene_id "g281"; # protein sequence = [MIMVKNYNPVIVFSFSKRECEANALLMSKFEFNSTDEQDLVTNIFTNAIENLSPDDRNLPQIAQLLPLLRRGIGVHHS # GLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTDTRKYDGREQRSLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPSVAKEMIKGE # ADRLDSAFHIGYNMVMNLMKVEGISPEFMLERCFHQFQSSTGIPKLQEGERRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g281 ### # start gene g282 Scaffold_6 AUGUSTUS gene 1234680 1235282 0.99 - . g282 Scaffold_6 AUGUSTUS transcript 1234680 1235282 0.99 - . g282.t1 Scaffold_6 AUGUSTUS stop_codon 1234680 1234682 . - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_6 AUGUSTUS CDS 1234680 1235282 0.99 - 0 transcript_id "g282.t1"; gene_id "g282"; Scaffold_6 AUGUSTUS start_codon 1235280 1235282 . - 0 transcript_id "g282.t1"; gene_id "g282"; # protein sequence = [MGSNCFHHSILLNSSGSSKFATELPSYVTKVHDEASKLDLAQFDSFHSRASGSLGASQPATGSVRMALEREGGIRCVT # IPDELSMQSAVAFAGASFFLITARMPNLLADDHKALVELACSTTLAAAYKPQLLDAVVPPRSDGRKRNIVFIVCGGFKVSLRELAEYEEVLRAEIERN # VNGYWEVVLNDGQIVDVDYSLKQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g282 ### # start gene g283 Scaffold_6 AUGUSTUS gene 1241063 1242767 0.64 + . g283 Scaffold_6 AUGUSTUS transcript 1241063 1242767 0.64 + . g283.t1 Scaffold_6 AUGUSTUS start_codon 1241063 1241065 . + 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS CDS 1241063 1241223 0.65 + 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS CDS 1241379 1241407 0.76 + 1 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS CDS 1241457 1241983 1 + 2 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS CDS 1242036 1242066 1 + 0 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS CDS 1242202 1242767 0.98 + 2 transcript_id "g283.t1"; gene_id "g283"; Scaffold_6 AUGUSTUS stop_codon 1242765 1242767 . + 0 transcript_id "g283.t1"; gene_id "g283"; # protein sequence = [MTTVSLSFPQAAASITQYIDISIDGDTAVAFTENVGQRFLSYGWQVLHVDNGDSELTEFTALVSLKADDIQALKTKFG # LPADKSFFVPPATYDAYADIGKRGASLEAQWNSLLGEYGQKYPKEHGELTRRISGELPTNWEQCLPVYKSTDAAQASRKLSEIVLTALAPVLPELLGG # SADLTGSNLTKVKGSVDFQPPSTGLGNYAGTYIRYGVREHGMGAIANGIHAYGGIIPYVATFLNFVSYAAGAVLLNQHYILATHDSIGLGEDGPTHQP # IETAIHFRSTPNLAFWRPADGNETSAAYLVALKSKKTPSILSLSRQNLPNLEASSIEKAAKGGYVVHEVESEDLTIVSAGSEVSIALEAAAKLNAEGV # KTRVVSLPCWLVFDKQPEEYRLSVLRSGAPILSLEALSTAGWSKYSHEVKISLPISNILLFICLM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g283 ### # start gene g284 Scaffold_6 AUGUSTUS gene 1244691 1245163 0.29 - . g284 Scaffold_6 AUGUSTUS transcript 1244691 1245163 0.29 - . g284.t1 Scaffold_6 AUGUSTUS stop_codon 1244691 1244693 . - 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_6 AUGUSTUS CDS 1244691 1244900 0.98 - 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_6 AUGUSTUS CDS 1244951 1245163 0.29 - 0 transcript_id "g284.t1"; gene_id "g284"; Scaffold_6 AUGUSTUS start_codon 1245161 1245163 . - 0 transcript_id "g284.t1"; gene_id "g284"; # protein sequence = [MSNPQQTLKCLSARMASVGYMFTRGGVVVVGVENGPDVNGRLDAVTEVALSEGIDDFEPLPPENDSLSRIKFYCETSA # LVELTDKLSKHPGVAILESEFVYNPTEKTAVSDQDAEILEDLVHALEVHDDVIHVTTSAAIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g284 ### # start gene g285 Scaffold_6 AUGUSTUS gene 1245996 1246409 0.87 + . g285 Scaffold_6 AUGUSTUS transcript 1245996 1246409 0.87 + . g285.t1 Scaffold_6 AUGUSTUS start_codon 1245996 1245998 . + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_6 AUGUSTUS CDS 1245996 1246409 0.87 + 0 transcript_id "g285.t1"; gene_id "g285"; Scaffold_6 AUGUSTUS stop_codon 1246407 1246409 . + 0 transcript_id "g285.t1"; gene_id "g285"; # protein sequence = [MQIFTVVSLQSILFFHLSELNVCLQDLYETDIAGSVADEKLLESPTQISTAEVPVSEPVEKSSVAPAPSDDSTATSSA # SASQPSAPATLAQPVQQIPTYEDPTIYRDTSSGMQASYEQNFSALEHRSVRPSEMKDDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g285 ### # start gene g286 Scaffold_6 AUGUSTUS gene 1247159 1247885 0.69 + . g286 Scaffold_6 AUGUSTUS transcript 1247159 1247885 0.69 + . g286.t1 Scaffold_6 AUGUSTUS start_codon 1247159 1247161 . + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_6 AUGUSTUS CDS 1247159 1247317 0.69 + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_6 AUGUSTUS CDS 1247385 1247885 1 + 0 transcript_id "g286.t1"; gene_id "g286"; Scaffold_6 AUGUSTUS stop_codon 1247883 1247885 . + 0 transcript_id "g286.t1"; gene_id "g286"; # protein sequence = [MREFFSQFGRVVDSTVMLDRETGRSKGFGFISLEDANVQQFLGFGHLEIDGKLIDVKLAQPRYQRESFQEDEQSGGGD # YNNNMRGAGNRGPNNYSAGGVSGNGTTFNNGVGGAVPASSVPFDPQALAALYTRMFQMANGGAVNSMMGGGMGGGMGGGMNPMMNMGANMGMGGVGGG # RGGGVQGGGLPRGPRGGPGGMGATGVGPSRQPRGQHNYHPYGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g286 ### # start gene g287 Scaffold_6 AUGUSTUS gene 1250022 1250855 0.43 - . g287 Scaffold_6 AUGUSTUS transcript 1250022 1250855 0.43 - . g287.t1 Scaffold_6 AUGUSTUS stop_codon 1250022 1250024 . - 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_6 AUGUSTUS CDS 1250022 1250358 0.7 - 1 transcript_id "g287.t1"; gene_id "g287"; Scaffold_6 AUGUSTUS CDS 1250494 1250632 0.43 - 2 transcript_id "g287.t1"; gene_id "g287"; Scaffold_6 AUGUSTUS CDS 1250735 1250855 0.54 - 0 transcript_id "g287.t1"; gene_id "g287"; Scaffold_6 AUGUSTUS start_codon 1250853 1250855 . - 0 transcript_id "g287.t1"; gene_id "g287"; # protein sequence = [MATSAKELGKKIIGYPERVVPVVTVKDWFSQFNRNPIQQVFGFACVAVDFYNAHHTIYQDLGWLTGDVIAGLTVGIVL # VPKACLMLSFTATCDLIRSAYQFFATSKDVSIGPVAVMSLTVSQIIAHVDDAHPGKWEGPEIATTVAFICGFIVLGIGLLRLGWLVEFIPAPAVSGFM # TGSAINIASGQVPGLMGITGFK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g287 ### # start gene g288 Scaffold_6 AUGUSTUS gene 1254834 1255194 0.56 + . g288 Scaffold_6 AUGUSTUS transcript 1254834 1255194 0.56 + . g288.t1 Scaffold_6 AUGUSTUS start_codon 1254834 1254836 . + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_6 AUGUSTUS CDS 1254834 1254836 0.56 + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_6 AUGUSTUS CDS 1254913 1255194 0.56 + 0 transcript_id "g288.t1"; gene_id "g288"; Scaffold_6 AUGUSTUS stop_codon 1255192 1255194 . + 0 transcript_id "g288.t1"; gene_id "g288"; # protein sequence = [MHILPFWSGAEHHDFHHMAFTNNYSTSFRWWDRIFGTDDKYLVYRERVQAAKAKALSKEDFLKAEQALMDEVLAEGLK # AENEVEERSSRKVKVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g288 ### # start gene g289 Scaffold_6 AUGUSTUS gene 1255678 1256676 0.93 + . g289 Scaffold_6 AUGUSTUS transcript 1255678 1256676 0.93 + . g289.t1 Scaffold_6 AUGUSTUS start_codon 1255678 1255680 . + 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_6 AUGUSTUS CDS 1255678 1255793 0.98 + 0 transcript_id "g289.t1"; gene_id "g289"; Scaffold_6 AUGUSTUS CDS 1255902 1256676 0.93 + 1 transcript_id "g289.t1"; gene_id "g289"; Scaffold_6 AUGUSTUS stop_codon 1256674 1256676 . + 0 transcript_id "g289.t1"; gene_id "g289"; # protein sequence = [MSLPPDRPSSTSKGRQKEESPQPTDIAEKLIAFRRRTAVDKRPSASSGSRSPKKLHAPPAMVNKSPPDTTADEFSRKL # QISSSSSPSRLMPAGPRQNQASKLYNPDRDPIPTMRRTAEPDTMSDTDSSHAPRYKRSPSVTRERERDAPARQLFDHRKDDPVRFAVFARPQRPVPTP # KSSGEYISAASSISSSFTLSSATDDSSASSAIFDQSRPNARSEDSATNAFSNHFKRLYRNITSLENRIKDEDVESEDDSRYTNRILSKEKDRTQENEE # AEKWSKRIEDHKRYVCHDFMWT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g289 ### # start gene g290 Scaffold_6 AUGUSTUS gene 1256718 1258689 0.67 + . g290 Scaffold_6 AUGUSTUS transcript 1256718 1258689 0.67 + . g290.t1 Scaffold_6 AUGUSTUS start_codon 1256718 1256720 . + 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_6 AUGUSTUS CDS 1256718 1257352 0.67 + 0 transcript_id "g290.t1"; gene_id "g290"; Scaffold_6 AUGUSTUS CDS 1257402 1258689 1 + 1 transcript_id "g290.t1"; gene_id "g290"; Scaffold_6 AUGUSTUS stop_codon 1258687 1258689 . + 0 transcript_id "g290.t1"; gene_id "g290"; # protein sequence = [MLQISLSPSVPDSLRTIPTKYNIIMRLWVTGFNKLLQSLQRACLESPLAMEYLQEFIMYAYTFYTGLYEEHPLIGFRS # NWLEALGDLARYRMAVAAIASSTVDGPALTAANVLEAAADGWARNNALKPKRRPSVSVPAARIDDSPSPSVGVAAARALELLPEKDQWRAIAQEWYGI # GIMDQPGTGKLHHHLGFLYREVEGEELRAIYHFVKSLVSLHPFLTSRENVLHVWSPDAQARRQLPDARATELFVLLHGMLFTNIQLDDFEPTFSRFME # RLELEVPEEREWIMMAIVNIGSLFEYGKTNGVLKRAGALGSSSSAPVISRIAKKEAQRDDDKMDVDDETKPRPDASPCISELDTTPDDLPRAFKLAME # VTFTMLRFVLQHPSRRPSPFSESRINPYLTVLLTFLSIMLKHQKTKEILERSLPWDEFAAMLALVPRNVMMSEGLSPLNNSRERWAMLAANTAPPLPE # DWCLRGMEWVGRKIFPYGYWKGFEDRKVEIEILSEAERVDITDGHIEDDDEHTESIAKNETKKRWVRIVRCAIGIADVVDGFNWVEGTREWKVEGVLS # AKVEQWKEEDRLQKESEELRRMGNSWADDSMDVDEDNVESFSDGSEEDDENDSEEIRALKVRSLLVFYLVSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g290 ### # start gene g291 Scaffold_6 AUGUSTUS gene 1267320 1269062 0.68 - . g291 Scaffold_6 AUGUSTUS transcript 1267320 1269062 0.68 - . g291.t1 Scaffold_6 AUGUSTUS stop_codon 1267320 1267322 . - 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_6 AUGUSTUS CDS 1267320 1267598 0.96 - 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_6 AUGUSTUS CDS 1267660 1268107 0.81 - 1 transcript_id "g291.t1"; gene_id "g291"; Scaffold_6 AUGUSTUS CDS 1268161 1268472 0.91 - 1 transcript_id "g291.t1"; gene_id "g291"; Scaffold_6 AUGUSTUS CDS 1268608 1269062 0.85 - 0 transcript_id "g291.t1"; gene_id "g291"; Scaffold_6 AUGUSTUS start_codon 1269060 1269062 . - 0 transcript_id "g291.t1"; gene_id "g291"; # protein sequence = [MTNVNLSVAFAEIDWHDYAIVQTIEFTIADATSELPPPMSVQEVENMTLAQKRMAAMIMENTVEDVEAHRAKQAAAEA # EAAAAVGNAGIGGDDAAMEESDDEDEERVMREQEEKRREIERAKALQASSVNAAAGPMKIRTDYVPKRNSMLTLSSMERATRALEARKAQASELQRGA # NVVSSLKNLARTRVDIFGAEQDEERRKKEEEEERERRKEREKVVWDGHTASKANTLDKFSTNVNFDEQIAAIHRSKGLGPQQANAIGPGIGPAAAPSP # LTSLPPPHASLPAPPQASSNPAYSTATVSSGPQPASAYQTPPVMLPPLHFQGIETTQPFGYQPGIAPGMHPSRVAALAAANGVLQSQAGVVRSADQME # GVEDDIPPAKRQKVNKIPGSQIYSEEDWIGMHPHPISLQFQLPTDNTKPEWKFDGKIVTVPDLPLNLLVSTLRERIIQHIGSSVNVSRIRLSYAGKML # TNKSTIASYNMEDEELVTLTLGDAKKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g291 ### # start gene g292 Scaffold_6 AUGUSTUS gene 1269423 1269884 0.63 - . g292 Scaffold_6 AUGUSTUS transcript 1269423 1269884 0.63 - . g292.t1 Scaffold_6 AUGUSTUS stop_codon 1269423 1269425 . - 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_6 AUGUSTUS CDS 1269423 1269766 0.89 - 2 transcript_id "g292.t1"; gene_id "g292"; Scaffold_6 AUGUSTUS CDS 1269806 1269884 0.7 - 0 transcript_id "g292.t1"; gene_id "g292"; Scaffold_6 AUGUSTUS start_codon 1269882 1269884 . - 0 transcript_id "g292.t1"; gene_id "g292"; # protein sequence = [MEFLSRQRKDLPAVLFFLLQKSNARFSVIDKTASYVAQSANPPLFEDKVREGQRSDPKFSFLNPADPYHAYYRHKMDK # IFQGEIDDEQVPSGDDKVDGAAIQAKVVDVGLEPPTPVFIIDMPNISAIDLCVVLYSFLTYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g292 ### # start gene g293 Scaffold_6 AUGUSTUS gene 1275735 1276602 0.14 - . g293 Scaffold_6 AUGUSTUS transcript 1275735 1276602 0.14 - . g293.t1 Scaffold_6 AUGUSTUS stop_codon 1275735 1275737 . - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_6 AUGUSTUS CDS 1275735 1276253 0.74 - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_6 AUGUSTUS CDS 1276340 1276486 0.14 - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_6 AUGUSTUS CDS 1276543 1276602 0.19 - 0 transcript_id "g293.t1"; gene_id "g293"; Scaffold_6 AUGUSTUS start_codon 1276600 1276602 . - 0 transcript_id "g293.t1"; gene_id "g293"; # protein sequence = [MFTFSRATITRKLFPLGTWDNVERWRQDPYVAGGRGMMFNTGDLGRWRPDGQLDHMGRVDDQVKVKGFRTCEGVFKTA # ALLVDSELWGFVTPSTVDPESVREAVSRVQPYYAVPTHYIALEDFPATRNGKVDKRALRSIALSSTLPYDMPSPCLSASSSPTCSDSEGVITPSSPFS # NSLSSSHIYGESSFWTDISLDDEAKGVTQKEFTDENLDLFRSIIQHTKRPEPLRFRSNDPILAQQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g293 ### # start gene g294 Scaffold_6 AUGUSTUS gene 1280619 1281284 0.99 - . g294 Scaffold_6 AUGUSTUS transcript 1280619 1281284 0.99 - . g294.t1 Scaffold_6 AUGUSTUS stop_codon 1280619 1280621 . - 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_6 AUGUSTUS CDS 1280619 1281284 0.99 - 0 transcript_id "g294.t1"; gene_id "g294"; Scaffold_6 AUGUSTUS start_codon 1281282 1281284 . - 0 transcript_id "g294.t1"; gene_id "g294"; # protein sequence = [MFNSVILHRLSENPNLIHGILATHKTFEDLGTFTLARGLREIRRVQVAKEDQARKSSLDDKRKSRRVSKEEHAPEEKK # NLVNNEDENDPDENSAASQIPHSDHDGGPTTTTEPVVSPTPDSIPSAKPSEKSKGKMKQRRSSSSLDAGSLERMAAAGIGRNGFVPTPEWVYSLSISI # YVKHAKTFCRRSLRGSKGTTCLNLCCENELMYQQAAAGYRNVDDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g294 ### # start gene g295 Scaffold_6 AUGUSTUS gene 1282179 1283456 0.33 - . g295 Scaffold_6 AUGUSTUS transcript 1282179 1283456 0.33 - . g295.t1 Scaffold_6 AUGUSTUS stop_codon 1282179 1282181 . - 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_6 AUGUSTUS CDS 1282179 1282686 0.94 - 1 transcript_id "g295.t1"; gene_id "g295"; Scaffold_6 AUGUSTUS CDS 1282734 1283259 0.92 - 2 transcript_id "g295.t1"; gene_id "g295"; Scaffold_6 AUGUSTUS CDS 1283330 1283365 0.92 - 2 transcript_id "g295.t1"; gene_id "g295"; Scaffold_6 AUGUSTUS CDS 1283435 1283456 0.39 - 0 transcript_id "g295.t1"; gene_id "g295"; Scaffold_6 AUGUSTUS start_codon 1283454 1283456 . - 0 transcript_id "g295.t1"; gene_id "g295"; # protein sequence = [MAIGIKCASEVFSLITPNDKAPENVATLIRVISLRLFNLVSDHTFPGPSSTSVSALATSFIKAGTGTGERNATKEVLN # CLRVLQRVLPVVFETEGAESGSFEVDVFWKKVEVDNMEEQPVPQTESPQFVIEDDEDSEDEAKSSAPQSAPTPHPKKQLPSLGERLFSSIIDLLFCCG # FTLPMQIQKDHYKINYVIWEKGIGSMVDPGPGHQYDSNKTEVLRLLLVLLSRQIYVSASSLFSKPSMYTLHLVQKLPRRDVLTLLCSLLNTAMNSPQA # QPITINSMAGKLPYNHLVFKGEDPRVNLVAICFEVLGVLLDFQSGSARDVVVGTNEQQTSAPTARTNEFRYFLMKLVSTFLIKPNHDTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g295 ### # start gene g296 Scaffold_6 AUGUSTUS gene 1287595 1287939 0.87 - . g296 Scaffold_6 AUGUSTUS transcript 1287595 1287939 0.87 - . g296.t1 Scaffold_6 AUGUSTUS stop_codon 1287595 1287597 . - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_6 AUGUSTUS CDS 1287595 1287939 0.87 - 0 transcript_id "g296.t1"; gene_id "g296"; Scaffold_6 AUGUSTUS start_codon 1287937 1287939 . - 0 transcript_id "g296.t1"; gene_id "g296"; # protein sequence = [MSWKTLPECGGSSLHNPILLNSSLQHSIPAPPPPPYYYSADDQVMMEDESGRIQLVGERLKSEKLVTGLIIGALGMET # PDGKFEVADFCYAGLPPQPSTTKEELEDRMEVDSTY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g296 ### # start gene g297 Scaffold_6 AUGUSTUS gene 1289030 1289905 0.81 + . g297 Scaffold_6 AUGUSTUS transcript 1289030 1289905 0.81 + . g297.t1 Scaffold_6 AUGUSTUS start_codon 1289030 1289032 . + 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_6 AUGUSTUS CDS 1289030 1289905 0.81 + 0 transcript_id "g297.t1"; gene_id "g297"; Scaffold_6 AUGUSTUS stop_codon 1289903 1289905 . + 0 transcript_id "g297.t1"; gene_id "g297"; # protein sequence = [MSVPSIDFLVHALSSLLPDFIKLKLEQNRSDSTILPVRLVVIDALGELFHSSGKTSTQTLVQRAQNVTEISAHLHSVA # SKFGIVVIVLNEVVDAFDREPDNEETPTTGLSYAEQSKWFARAHSLPGENRKEASLGLVWANQVNARIMMSRTGRRRYTNFGQSATQKRQKTSNGHHT # GNTPTEDPERLELVRRLSIVFSSASDPGSLDYVVDSAGITVLQEEEQGSSRKTTANEPTALPSVALPPTMSSSQIAPLDAGVVESETAVRIDLPPEPN # GAPDDEDEWEAFWERTR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g297 ### # start gene g298 Scaffold_6 AUGUSTUS gene 1295177 1295518 0.46 - . g298 Scaffold_6 AUGUSTUS transcript 1295177 1295518 0.46 - . g298.t1 Scaffold_6 AUGUSTUS stop_codon 1295177 1295179 . - 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_6 AUGUSTUS CDS 1295177 1295518 0.46 - 0 transcript_id "g298.t1"; gene_id "g298"; Scaffold_6 AUGUSTUS start_codon 1295516 1295518 . - 0 transcript_id "g298.t1"; gene_id "g298"; # protein sequence = [MSNYADGSTVVGDDSRDQQDFLKSKPKVNDDLLPNPVSPKKRVGHPFVNSIETELEERPFFVRIGKDGLIAALQKLDR # QLAEVCIYEYHLQQTQLSDFFQIVWEAQITFEEGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g298 ### # start gene g299 Scaffold_6 AUGUSTUS gene 1296792 1298849 0.64 + . g299 Scaffold_6 AUGUSTUS transcript 1296792 1298849 0.64 + . g299.t1 Scaffold_6 AUGUSTUS start_codon 1296792 1296794 . + 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_6 AUGUSTUS CDS 1296792 1296944 0.76 + 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_6 AUGUSTUS CDS 1297086 1297366 0.76 + 0 transcript_id "g299.t1"; gene_id "g299"; Scaffold_6 AUGUSTUS CDS 1297478 1298849 0.94 + 1 transcript_id "g299.t1"; gene_id "g299"; Scaffold_6 AUGUSTUS stop_codon 1298847 1298849 . + 0 transcript_id "g299.t1"; gene_id "g299"; # protein sequence = [MKRAQEVIAPYRDPAAGIPDPSFVLQLPDEIYSGSNLYAVQKFFDGEFQFDRFNKVFPTPSDYSSKSNKDALETFSQA # ITSNLIGGVGYFYGNSIINEKFSYEWDEDDEAEDRSASDEKGPRLTEPKKLLTATPSRSFFPRGFYCISSRCVALEDNVYHSLEILKDWIDLIDDNGW # VAREQILGEEARSKVNLSSFISSCIAILYSTQVPAEFLTQVPNYANPPTLTVAVTAFINRVKIASLGPSDADLGMDFGMGSSQTPLTEVKTEPGNRSL # DPEVATAFLKGIYKPLKRHYDWFRRTQRGQIKQYGRKARSRTEAYRWRGRSDKHVLTSGMDDYPRGPPHAGELHLDLISWMALFSRTMREIAEFIGEN # DDAISYGEIEKAILDNIEGELAFSRSIGIMGWSSLLDLHWNEEQQMYCDANVDDDGELTSSSFCIYHTDSDCTVGLSDESYHVCNKGYLSLFPFMLSL # LSPDSPHLGAILDVVRDPEQLWSDYGLRSLSASHPEYGTGENYWKGPIWVQMNYLVLGALHNRYAVEEGPYKLRAQEIYRELRKNIIDNVFKVTVQLS # SCQIFAEPSCKEYERTGYVWEQYDPNTGYGQRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g299 ### # start gene g300 Scaffold_6 AUGUSTUS gene 1299313 1300380 1 - . g300 Scaffold_6 AUGUSTUS transcript 1299313 1300380 1 - . g300.t1 Scaffold_6 AUGUSTUS stop_codon 1299313 1299315 . - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_6 AUGUSTUS CDS 1299313 1300380 1 - 0 transcript_id "g300.t1"; gene_id "g300"; Scaffold_6 AUGUSTUS start_codon 1300378 1300380 . - 0 transcript_id "g300.t1"; gene_id "g300"; # protein sequence = [MPRRSDGRSIEEVRGEEDYQDPDITIRDGNSPGNDSEIIEVIKVRRHTQDERENQLPSVSETAAKSSKSLKSRASRAF # NSLKNVGRSVSRSRIIPEVVTSDAETSRAPSPTPSRRGSMIFSLFSHSPSLESRSSFDSFNESPPSSVTEASTPEAFDVELHSPSSAEMQGFVPYPDT # DDDGEGEDDMETTPRAPRRHCPSPALHPSVVPSSVPRLNRRRFSVLSLFTASKDSERSDAGSSTPTSPSIPTLDSLSRDSLGPSRTDSTESSSSSGPT # TPVDEAFPDPLPNRPSISMLKRLPSFSRSPRKKEATPLVIEPIAPNSPVALGEIGEPDLSFGEIRLDSLHFDELSFDAGRF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g300 ### # start gene g301 Scaffold_6 AUGUSTUS gene 1301179 1303371 0.48 - . g301 Scaffold_6 AUGUSTUS transcript 1301179 1303371 0.48 - . g301.t1 Scaffold_6 AUGUSTUS stop_codon 1301179 1301181 . - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_6 AUGUSTUS CDS 1301179 1303371 0.48 - 0 transcript_id "g301.t1"; gene_id "g301"; Scaffold_6 AUGUSTUS start_codon 1303369 1303371 . - 0 transcript_id "g301.t1"; gene_id "g301"; # protein sequence = [MWIANDSCKLEEMSIRMGAKGLNEDGAIFGETASSYIYHSSSSVGSLTFIFRFRTHIMPSLPKTSNSTLCDTLPAPRL # SRDSDNIMSSYADEKLEMPTLSRPVSDSPRPSVIKEPLRLTSTSLQQPPGRKLCVRHQRMADEGTNLKLQHVRTRLNSACPCTYSSQSLDALSLEERG # AVNAIWSSFSSSSHPRRALILQGLLTMCCFSQLSLLTEQLAHLIRIDPFTVLPRELSLKVLSYLDATSLCRAAQVTKKWKSLADDDILWRGICEQHIG # QKCHKCGWGLPVLEKKKIYHLPGSPCPSPDLPSLKRSLEDSTDLVAPPLKRQRSDVLHPSSDINPELESSSSSSSLLALTDTKPAATTRPWKDVYSER # MTIERNWRRGRCTVRTLKGHTDGVMCLQYSETLTHPSFPVLITGSYDRTVRVWNLETGVELHCLKGHTRAIRALQFDDVKLITGSMDMTLKVWDWRRG # RCIRTLTGHTEGVVCLNFDSNVLASGSVDATIKVWNLRTGGAFTLRGHQDWVNSVQLWDSLKTGQSSASSATPVFDVPGCGAPQIDPGKMLFSASDDG # TIRLWDLTLRTCIKQFTGHVGQVQSIKLLLADECDEPADVEIADLDQEERTLNHVVALDSSSPSLASTSSSSFVSDQSLASRPVASTVSRTKKPLLVS # GSLDNTTKIWDIETAQPIQTFFGHIEGVWSVSVNKMRLVSGSHDRTIKVRIPELLPFKINLILS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g301 ### # start gene g302 Scaffold_6 AUGUSTUS gene 1310872 1311465 0.33 - . g302 Scaffold_6 AUGUSTUS transcript 1310872 1311465 0.33 - . g302.t1 Scaffold_6 AUGUSTUS stop_codon 1310872 1310874 . - 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_6 AUGUSTUS CDS 1310872 1311203 0.72 - 2 transcript_id "g302.t1"; gene_id "g302"; Scaffold_6 AUGUSTUS CDS 1311312 1311465 0.34 - 0 transcript_id "g302.t1"; gene_id "g302"; Scaffold_6 AUGUSTUS start_codon 1311463 1311465 . - 0 transcript_id "g302.t1"; gene_id "g302"; # protein sequence = [MSDNYVVHELLASADQATSCDPKVMHPNEVAGEDIFCSAGDGLWREVAQGKDPCIGYVFRETAKPFRKIVILGDTCDP # SAMTPLCLDPSPSLLIHEAADAHIPQEIDPKSKRSYDVVKEKALARGHSLPEMAGAFARTIGAQKLVLNHLGGRQASQCSSIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g302 ### # start gene g303 Scaffold_6 AUGUSTUS gene 1315151 1315462 0.38 + . g303 Scaffold_6 AUGUSTUS transcript 1315151 1315462 0.38 + . g303.t1 Scaffold_6 AUGUSTUS start_codon 1315151 1315153 . + 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_6 AUGUSTUS CDS 1315151 1315462 0.38 + 0 transcript_id "g303.t1"; gene_id "g303"; Scaffold_6 AUGUSTUS stop_codon 1315460 1315462 . + 0 transcript_id "g303.t1"; gene_id "g303"; # protein sequence = [MLKGNVGNSMTEYVFVISTVVRTKHSRIGYQGYDGSQAYEDYKYDANYTRQGPGFPQDQSGRGGGPGHPKKRLQPSEP # SPHVIFLGLDPDFTESDVCNIHSFL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g303 ### # start gene g304 Scaffold_6 AUGUSTUS gene 1319521 1320811 0.98 - . g304 Scaffold_6 AUGUSTUS transcript 1319521 1320811 0.98 - . g304.t1 Scaffold_6 AUGUSTUS stop_codon 1319521 1319523 . - 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_6 AUGUSTUS CDS 1319521 1320381 0.98 - 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_6 AUGUSTUS CDS 1320467 1320811 0.98 - 0 transcript_id "g304.t1"; gene_id "g304"; Scaffold_6 AUGUSTUS start_codon 1320809 1320811 . - 0 transcript_id "g304.t1"; gene_id "g304"; # protein sequence = [MSSKITPNTVSPPKKVRVGVLGATGTVGQRFITLLSEHPWFIIEALGASERSKGRKYREAVKWKQTIPLGGLGLGGVG # TSETEKISSSDLRSDEGRAADLIVKGCTPEEFKTCQLSLEYAFRAANIPLFSNAKNYRRDPHVPLIVPLVNPSHFSIIPQQQSLHSPPLSKGFIVTNA # NCSTTGYVIPLAALEKAFGPIESVLVTTMQAISGAGYPGVPSLDILGNVVPYIGGEEEKIEWETLKILGGITDSENETDKNGAPLKTFDMHQAGGRPA # LRVSASCNRVPVVDGHMECVSLRFHRRPPPSPQQVREALSVFTPEIQSLGCPSSPRKAIEVFEEPDRPQPRLDVKGTHNGAGVSVGRVRQCQVLDIKF # VVLSDNVSIGAATSSIINAEYAVLKGIVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g304 ### # start gene g305 Scaffold_6 AUGUSTUS gene 1322643 1324589 0.18 + . g305 Scaffold_6 AUGUSTUS transcript 1322643 1324589 0.18 + . g305.t1 Scaffold_6 AUGUSTUS start_codon 1322643 1322645 . + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_6 AUGUSTUS CDS 1322643 1322825 0.53 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_6 AUGUSTUS CDS 1322967 1323444 0.35 + 0 transcript_id "g305.t1"; gene_id "g305"; Scaffold_6 AUGUSTUS CDS 1323763 1324589 0.5 + 2 transcript_id "g305.t1"; gene_id "g305"; Scaffold_6 AUGUSTUS stop_codon 1324587 1324589 . + 0 transcript_id "g305.t1"; gene_id "g305"; # protein sequence = [MRYLASVNPPDANSKAKLKLSLDDSSEIEKQILATNPILESFGNAKTTRNDNSSRFGKYIQPLTERNYHIFYQLCAGA # PLKERKDLGLDTDITKFHYLKQGGPSSTPIAGVDDAEEFRATQQALSVVGISVEKQWAVFRLLAALLHLGNIKITQLRNDSSIDDNDPALLLSTRFLG # VNVAEFKKWTVKKQIITRSEKIVTSLNGAQATVVRDSVAKFVYAXEYVKEEINWTFIDFSDNQPCIDVIEGKLGVLALLDEESRLPSGSDQSFLQKLN # NQLLKPQNKVFKKPRFGNTAFTIAHYALDVTYEVEGFLEKNRDTVPDEHMTLLATTKNSFLKEVLDAALNSTKAPDSPNPGSPAGSDSGSGSRRSSVI # PDPGRQSWVAPSSGATPSASSGPKRPGGFVARKPTQGSIFKASLITLMETLSVTNVHYIRCIKPNEAKRPWEFQPQQVLSQLRACGVLETIRISCAGY # PTRWTYEEFAERYDQSLILTFSRRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g305 ### # start gene g306 Scaffold_6 AUGUSTUS gene 1325213 1326420 0.49 + . g306 Scaffold_6 AUGUSTUS transcript 1325213 1326420 0.49 + . g306.t1 Scaffold_6 AUGUSTUS start_codon 1325213 1325215 . + 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_6 AUGUSTUS CDS 1325213 1325224 0.57 + 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_6 AUGUSTUS CDS 1325278 1326420 0.6 + 0 transcript_id "g306.t1"; gene_id "g306"; Scaffold_6 AUGUSTUS stop_codon 1326418 1326420 . + 0 transcript_id "g306.t1"; gene_id "g306"; # protein sequence = [MSLISCVRRRLARKQLKVLRQEARSVSKFKEISYKLENKVVELTQTLQTRTQERKDLQAQVTELEQRIQHWTSRHEEV # DNRARQFQASLQAAEAEVARRDELLLAKADTEKRLEEALAKVFEKEETIQKLTDDLLAKSTQLEHQQRTIDANPVRTQEDSSVIMTLKNEVSNLREQL # NRSNALNALTRGSRADPPLSPTFAPALRGAETNGAVPAANGHAPQGHQRRHSSAGVYSLAPLDNRSSTDEIMIDVKRSQAMNPRAVSVVYNGEDNFFK # FHKNGLSGIRDDDPAEEKIRLMQDVKRLDEDILDGLIRGLKIPAPSLTNPSAVKEILFPANLISLVTNEMWKYGLIPESERFLANVMQTIQSHVMVNL # TDILREVANKIH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g306 ### # start gene g307 Scaffold_6 AUGUSTUS gene 1326787 1327327 0.79 + . g307 Scaffold_6 AUGUSTUS transcript 1326787 1327327 0.79 + . g307.t1 Scaffold_6 AUGUSTUS start_codon 1326787 1326789 . + 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_6 AUGUSTUS CDS 1326787 1326952 0.79 + 0 transcript_id "g307.t1"; gene_id "g307"; Scaffold_6 AUGUSTUS CDS 1327008 1327327 1 + 2 transcript_id "g307.t1"; gene_id "g307"; Scaffold_6 AUGUSTUS stop_codon 1327325 1327327 . + 0 transcript_id "g307.t1"; gene_id "g307"; # protein sequence = [MDDILNLLNKVWKSLKSYYMEESVVQQVVTELLKLIGVTSFNDLLMRRNFSSWKRAMQIQYNITRIEEWCKSHDMPEG # TLQLEHLMQATKLLQLKKVRSASVMHGNLKLILFYQATAADIEIIYDVCWMLSPMQIQRMCTNYYVADYEVASLLFSKIDDFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g307 ### # start gene g308 Scaffold_6 AUGUSTUS gene 1328100 1329324 0.07 + . g308 Scaffold_6 AUGUSTUS transcript 1328100 1329324 0.07 + . g308.t1 Scaffold_6 AUGUSTUS start_codon 1328100 1328102 . + 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_6 AUGUSTUS CDS 1328100 1328785 0.28 + 0 transcript_id "g308.t1"; gene_id "g308"; Scaffold_6 AUGUSTUS CDS 1328949 1329324 0.33 + 1 transcript_id "g308.t1"; gene_id "g308"; Scaffold_6 AUGUSTUS stop_codon 1329322 1329324 . + 0 transcript_id "g308.t1"; gene_id "g308"; # protein sequence = [MITHIPMASHPNPEKVLVIGGGDGGVVREALKYDSVKEVVLCDIDEAVPRVSKLYLPHMAELLADPRVTVHIGDGFAF # LQSHEGTYDVIVTDSSDPVGPAASLFQKPYYQLLHDALRSGGHIAAQGECLWLHLPLIKEVRANAQEIGFAHVEYAFTTIPTYPSGQIGFLLAGKTGG # QGLREPIKGPNSPTRYWNPDVHRASFVVPEFARALLEEGKDVSPKFGTNVSLQTLATAKGLAESLPRTNAISLDVNKTDELESQVAAHDLVISLIPYT # YHAEVIKAAIKGKTDVVTTSYVSPAMRELDEAAKAAGITVLNEIGLDPGIDHLYAVKTIDEVHAKGGKVSLHPFFHCIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g308 ### # start gene g309 Scaffold_6 AUGUSTUS gene 1329503 1330267 0.3 + . g309 Scaffold_6 AUGUSTUS transcript 1329503 1330267 0.3 + . g309.t1 Scaffold_6 AUGUSTUS start_codon 1329503 1329505 . + 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_6 AUGUSTUS CDS 1329503 1330267 0.3 + 0 transcript_id "g309.t1"; gene_id "g309"; Scaffold_6 AUGUSTUS stop_codon 1330265 1330267 . + 0 transcript_id "g309.t1"; gene_id "g309"; # protein sequence = [MGEAKPYYISPAYAFVAYPNRDSTPFRDFYKINGEGEGETCIRGTLRYQGFPEFIKALVQVGWLNGEGQEWLNKGLTW # VQVLGKMLAVEGGDEATLISKIKSLCAFPNESEESRIISGFRWIGMFTSDPISPRAASGAAHPNLLDTLCARLEQLMAYAPGERDFVMLQHKFVVEWA # DKSVQTLTSTLEAYGAPLGYGHSAMALTVGLPCGIATQLILDGVLNMKGVHAPYTREICDPIRERLEAEGVGLVESVL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g309 ### # start gene g310 Scaffold_6 AUGUSTUS gene 1331287 1334061 0.3 + . g310 Scaffold_6 AUGUSTUS transcript 1331287 1334061 0.3 + . g310.t1 Scaffold_6 AUGUSTUS start_codon 1331287 1331289 . + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS CDS 1331287 1332137 0.81 + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS CDS 1332263 1332310 0.86 + 1 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS CDS 1332405 1332435 0.93 + 1 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS CDS 1332524 1332865 0.36 + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS CDS 1332910 1334061 0.39 + 0 transcript_id "g310.t1"; gene_id "g310"; Scaffold_6 AUGUSTUS stop_codon 1334059 1334061 . + 0 transcript_id "g310.t1"; gene_id "g310"; # protein sequence = [MDSFFGRKKAKTRHSSVSGVTELNESASVPYDKLPSPRSPLPVGTISQGVINGGVISAPMTNPTLTSDGVELNKYMIQ # RSRAERDKAYDLYPNHRPASPSTTVSWSDSSTAYSDSFQSKPPRDPQTARARRSEASSTSSVHSRSPNMSDFGQIPSQHPSSSSTIRPTSTMTTRSEG # HRLSKYAPSLVASDVGSHLSHLYHPHRSHNPDEFELPRPTDDEIEALFEQVKLTRGVDDLNLPVEQKWNLVKSDLHIRWKEEKTRDEQAKRQIETGQS # SAIIVDTPEWNSVAGSITLLKYRERLREHDIQLEYESATDKALAHPQIVTQVASSLNSPHIPTRKLLLDLLSFLTYWNEGKIQPVVVSALEVLSSSNN # ENGGVYDFWFKSFEQTLSGRGKMGSLVGASEDVKKAGGIDTNLNDYAVGIAILSNLILIVGILDFIEDLDLRLHHRSRMESAGLHHIIALCQEFNVPN # IDKKLRQLQGSFDEDERNLRSQLDQEILKDLNNPGDVYKAIFAKIESSKARDYFLSMMQHLLLIREEGEPMVHYYQLIDSMVTDIVMDKKLAGAEQRF # GHSVERIIAQFNETGRLQEVEDELQKSRSEALRLKLENDALLDEISKGQEGMVGRLKEEMLRLEQKLATSRETTARLQNQVESERAEYEDQINQLETQ # IIELFRMLKEVGRGVTTVLDTGGMDRKTLVQTLEKQFQRTQTINKLEGKDVFGRRRKKEGGFEESDDDDREDTPGKSSLRRSRVLTSKKSLSKKGDKA # EDSNRASQFMDAEDAHAEEQIQQQLNAGASFVSVNVSFEWFNF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g310 ### # start gene g311 Scaffold_6 AUGUSTUS gene 1334274 1335012 0.9 + . g311 Scaffold_6 AUGUSTUS transcript 1334274 1335012 0.9 + . g311.t1 Scaffold_6 AUGUSTUS start_codon 1334274 1334276 . + 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_6 AUGUSTUS CDS 1334274 1334287 0.92 + 0 transcript_id "g311.t1"; gene_id "g311"; Scaffold_6 AUGUSTUS CDS 1334442 1335012 0.9 + 1 transcript_id "g311.t1"; gene_id "g311"; Scaffold_6 AUGUSTUS stop_codon 1335010 1335012 . + 0 transcript_id "g311.t1"; gene_id "g311"; # protein sequence = [MYQPPLPVTTLCPDCSSPPPPPPPPPPPPPPPPPPPPPLAAGGFPAPPPPPPPPPIGFKGFPGSAPSSSSSSLASSPA # PPPPPMPGSARSNTSFGSNPNSARASMLLGANPLSARKDLPITPNIKMKQLQWDKLPQQQVAKTVWNEDQPSRENEMIKILKDDGVWMEMEEDFKAKQ # LVINLMGKLHCSNLYLNY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g311 ### # start gene g312 Scaffold_6 AUGUSTUS gene 1336401 1336799 0.46 + . g312 Scaffold_6 AUGUSTUS transcript 1336401 1336799 0.46 + . g312.t1 Scaffold_6 AUGUSTUS start_codon 1336401 1336403 . + 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_6 AUGUSTUS CDS 1336401 1336799 0.46 + 0 transcript_id "g312.t1"; gene_id "g312"; Scaffold_6 AUGUSTUS stop_codon 1336797 1336799 . + 0 transcript_id "g312.t1"; gene_id "g312"; # protein sequence = [MRENREKAAAANNESDDVLDSLLEKLRNGEGGRKSRRTRGTAEAQPAIPLTLQLDSSAVNDTADIARDMLAQLQSNGF # APMPSPTATSNPSTRRRTRRRMEAPTSDSLLDLRTPTSPLAVEVELDLGSETDS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g312 ### # start gene g313 Scaffold_6 AUGUSTUS gene 1342757 1345427 0.16 + . g313 Scaffold_6 AUGUSTUS transcript 1342757 1345427 0.16 + . g313.t1 Scaffold_6 AUGUSTUS start_codon 1342757 1342759 . + 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_6 AUGUSTUS CDS 1342757 1343492 0.47 + 0 transcript_id "g313.t1"; gene_id "g313"; Scaffold_6 AUGUSTUS CDS 1343615 1344053 0.31 + 2 transcript_id "g313.t1"; gene_id "g313"; Scaffold_6 AUGUSTUS CDS 1344182 1345427 1 + 1 transcript_id "g313.t1"; gene_id "g313"; Scaffold_6 AUGUSTUS stop_codon 1345425 1345427 . + 0 transcript_id "g313.t1"; gene_id "g313"; # protein sequence = [MRPREREFLLFSDCLVWLANEEAEKKEKEWNFELDLGSIWSSFMGSGTSSSEKSVGVQRPRSAALVKSTPLIVEEEFD # IDTIDKPDDYNSLDHKTHVIPASAIPRNLKRPPMVRTRSKSEAELPALQGKAAVPSTSHDSPPSSAQTQSALAVDKNARRITHQSNFSRTNKNPVLHI # HGRGRKDSSTSPGYGGMDQDQWLYKGRIELVNLEIVVDTSFTVEDELEELGSDTLNEIKWRWEVLSPEGTKSQQLVALNAQRPNSTLTSSEATQHIRR # ALQALPFAPNDVRMQGSKVEKRLSKGSVDSGDGASVDGMKEGIKKGKERLNSSKKHRKSRSKDQKVSNPDWHKERRLKSSIGFRRSGFPMKRQRDACA # VEGYSDGGEGDTIADFVGDVKSARACNACYESVFPLIDHHSDPENKADDSTVRSRSHPPLAHSSVSDSTSSFLPPSTSAMTYVSNTDTITSLSHLPSW # MTMSVPSLALSSSSNNIGGGARIKSKGKELSGPEALMAIDSKRYGYDLEARRQSDNLGENRSRRDSGVVFDLDSSTDDIALDDVVQPLRRGSRIKLRS # QSSSGSRPRSFIEVFQSTGGGDTPQPQTLMQSTSPLEEMAEFNEDTIARLAYVDGEDSSVLSSSSVNSSRRHTTINLSTSSSSVSLSISPPISSGELN # VQGRSLLYNASLAERREDTVRRNKRFSMPAVALQTTSVVARTQSMSPETSGMVSREKSVAFVDSGSPLGRDQDGKRVTGNKIGDLLPGMSGTRSKRFS # LVLEGVLDTRLVFTLVVAMTMHLQAVDSKAGVTPKKHRKGQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g313 ### # start gene g314 Scaffold_6 AUGUSTUS gene 1346050 1346820 0.88 + . g314 Scaffold_6 AUGUSTUS transcript 1346050 1346820 0.88 + . g314.t1 Scaffold_6 AUGUSTUS start_codon 1346050 1346052 . + 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_6 AUGUSTUS CDS 1346050 1346820 0.88 + 0 transcript_id "g314.t1"; gene_id "g314"; Scaffold_6 AUGUSTUS stop_codon 1346818 1346820 . + 0 transcript_id "g314.t1"; gene_id "g314"; # protein sequence = [MPKASAKTFLLPSTSSVIFYKTQRSGAIERERDVILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSI # QRDDLASYIQTNYTADRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIRDDELPTAHVAIAVEGVGWSSPDYFPMMV # MQSIFGNWDRSLGASSLLSSRLSHIISSNSLPTHSCPSHLLLGHRTLGYLSCFRKPDEPGRHAALYAQRMDEDEHCPYRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g314 ### # start gene g315 Scaffold_6 AUGUSTUS gene 1347439 1349277 1 + . g315 Scaffold_6 AUGUSTUS transcript 1347439 1349277 1 + . g315.t1 Scaffold_6 AUGUSTUS start_codon 1347439 1347441 . + 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_6 AUGUSTUS CDS 1347439 1349277 1 + 0 transcript_id "g315.t1"; gene_id "g315"; Scaffold_6 AUGUSTUS stop_codon 1349275 1349277 . + 0 transcript_id "g315.t1"; gene_id "g315"; # protein sequence = [MQHDNRSVPYLPSERAPDTVPPLPTYEAAVESFSNLAINDARRDPIPRSTSSMSMRSLQSIQPPQHQRMMDPSRHANG # LPPAPNYARTHANHEPISPRRDNYPESDRMTVSSHDDQSIASPDSFSSSQSTQSWAGYAQPLQHGWPSNGYDPYMSAASSVLGMAPPPGQQYPPSQGP # YNPNLQYHQYANSQVSLGSNHSGSYAAGYAASVASFPPPNGRATLPPVSDTASEIEPRPSLARGESLLPATNKSKAVDLSTPPYTKQYIDSYRQRIKG # DPDPEAHFLYAKYLIDAARKIRTSSKDQRSAKKYSELLIGEALKVVRRLATQGDAYAEAQFFLANCFGTGALGLQVDHERAYHLYLQAAKQNHAAASY # RVAVCNEIGAGTRKEPPRAAAFYRKAASLGDTAAMYKLGMILLQGLLGEAKNPREAVGWLRRAAEQADEENPHALHELGLLYEMPNSGLVPHDPIQAK # NLFTQAAHLGYTQSQYKLGQCYEYGALSCPVDPRRSIAWYTKAAEKGDPEAELALSGWYLTGSEGVLKQSDNEAYLWARRAANKGLSKAEYAVGYYAE # VGIGINQDIEFAKRWYMRAAGMWCNAVSRPILLLILVDDICSSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g315 ### # start gene g316 Scaffold_6 AUGUSTUS gene 1350529 1351209 0.28 - . g316 Scaffold_6 AUGUSTUS transcript 1350529 1351209 0.28 - . g316.t1 Scaffold_6 AUGUSTUS stop_codon 1350529 1350531 . - 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_6 AUGUSTUS CDS 1350529 1351209 0.28 - 0 transcript_id "g316.t1"; gene_id "g316"; Scaffold_6 AUGUSTUS start_codon 1351207 1351209 . - 0 transcript_id "g316.t1"; gene_id "g316"; # protein sequence = [MEGKEIKDDSFRRMEGSQVGLEWVEENESAMKEPIVIESPEGLGMNMPDENFTVDDVGLLVGEKNPIEVIGMFIPFSA # RMADNHNRTTDVASQANAPGWTVGQWVEYYNLEPHQRDKIFNVISLEISGTLLADRILPPRLVRELDWVENFWPSTRKGKGHTYPKVQLYCLMGVQGA # WTVSLVIFSSTHVLILPDNRIGILTLLAPLFTTTSCTAPKYYFNHAQNLV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g316 ### # start gene g317 Scaffold_6 AUGUSTUS gene 1351381 1351689 0.69 - . g317 Scaffold_6 AUGUSTUS transcript 1351381 1351689 0.69 - . g317.t1 Scaffold_6 AUGUSTUS stop_codon 1351381 1351383 . - 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_6 AUGUSTUS CDS 1351381 1351689 0.69 - 0 transcript_id "g317.t1"; gene_id "g317"; Scaffold_6 AUGUSTUS start_codon 1351687 1351689 . - 0 transcript_id "g317.t1"; gene_id "g317"; # protein sequence = [MASGRRSTRSNGHNPTEGSPENDATKDQIEATNNESPETKLADDRCPACTPETIAQLDDEVNEQWAMCGACKVWYHWR # CTGEGVDLDTIDKWSVRTTVYNNI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g317 ### # start gene g318 Scaffold_6 AUGUSTUS gene 1351797 1353160 0.34 - . g318 Scaffold_6 AUGUSTUS transcript 1351797 1353160 0.34 - . g318.t1 Scaffold_6 AUGUSTUS stop_codon 1351797 1351799 . - 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_6 AUGUSTUS CDS 1351797 1352130 0.7 - 1 transcript_id "g318.t1"; gene_id "g318"; Scaffold_6 AUGUSTUS CDS 1352182 1352303 0.71 - 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_6 AUGUSTUS CDS 1352403 1352486 0.4 - 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_6 AUGUSTUS CDS 1352654 1353160 0.69 - 0 transcript_id "g318.t1"; gene_id "g318"; Scaffold_6 AUGUSTUS start_codon 1353158 1353160 . - 0 transcript_id "g318.t1"; gene_id "g318"; # protein sequence = [MSHLGRPDGKVNEKYSLKPVAAELESLISKPVTFLKDCVGPEVEDAVSSASLGSVILLENLRFHIEEEGSVKNKDGTK # TKADAAKVTEFRDGLTKLGDVYVNDAFGTAHRAHSSMVGVKLPQRAAGFLVKKELEFFAKALEKPERPFLAILGGAKVSDKILLIENMLDKIGNSLFD # APGSEKVKGLVEKAKKNNVKLTGTASETEGIPDGWMGLDAGPKSQELFRQTVLEAKTILWNGPPGVFEFPAFSAGSKSLLDANIEAASKGAVVIVGGG # DTATLVAQHKSEDKLSHVSTGGGASLELLEGKVRPIHSLSTVFIGSHNHSDTPRCRRAQREDLTIKQILNTEGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g318 ### # start gene g319 Scaffold_6 AUGUSTUS gene 1353220 1354462 0.65 + . g319 Scaffold_6 AUGUSTUS transcript 1353220 1354462 0.65 + . g319.t1 Scaffold_6 AUGUSTUS start_codon 1353220 1353222 . + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_6 AUGUSTUS CDS 1353220 1353278 0.67 + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_6 AUGUSTUS CDS 1353327 1353477 0.71 + 1 transcript_id "g319.t1"; gene_id "g319"; Scaffold_6 AUGUSTUS CDS 1353857 1354462 0.77 + 0 transcript_id "g319.t1"; gene_id "g319"; Scaffold_6 AUGUSTUS stop_codon 1354460 1354462 . + 0 transcript_id "g319.t1"; gene_id "g319"; # protein sequence = [MVVTILKGIFNGGQCSYNTLSIRTYSGVGDLSILQRNVEVNTNKYAFPFEVEVSNGKLVGKGHDKEPRGVDKLSEEEL # TERMERIRQQNEKIKQRRVVRFHYITYNEIYSPTYIQDVQADEDAFRKTQQNERAKMARIRKVQESVNNTREQNAKRKMDKIQSREWDSGKHSPGDWK # ARNQPTQTSPPNESQEADGTSVASSQWARGGSAGRGSIRGRGRGRGSRRGGRPVTPAEVSDLPDSGEAPGAGWEPWGDIAESKPLVDESEDAVAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g319 ### # start gene g320 Scaffold_6 AUGUSTUS gene 1359466 1360076 0.44 + . g320 Scaffold_6 AUGUSTUS transcript 1359466 1360076 0.44 + . g320.t1 Scaffold_6 AUGUSTUS start_codon 1359466 1359468 . + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_6 AUGUSTUS CDS 1359466 1359488 0.51 + 0 transcript_id "g320.t1"; gene_id "g320"; Scaffold_6 AUGUSTUS CDS 1359557 1360076 0.51 + 1 transcript_id "g320.t1"; gene_id "g320"; Scaffold_6 AUGUSTUS stop_codon 1360074 1360076 . + 0 transcript_id "g320.t1"; gene_id "g320"; # protein sequence = [MNGNSKASYGTYGVDQPINAGLDLEMPGPTRWRTPTLVNHVLTAQKLSPSTLDDRVRNMLSYIQQQARLNPEVVYGDG # KERTRDTPEIRQFCRTLAAEGIVLLQNRNKVLPLLPNRVRKIAIVGPNAKGSVISGGGSAALKASYIITPYQGIQQGAFDDLQISYTIGCYGQSSKHY # VKVY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g320 ### # start gene g321 Scaffold_6 AUGUSTUS gene 1362061 1362802 0.98 + . g321 Scaffold_6 AUGUSTUS transcript 1362061 1362802 0.98 + . g321.t1 Scaffold_6 AUGUSTUS start_codon 1362061 1362063 . + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_6 AUGUSTUS CDS 1362061 1362379 0.98 + 0 transcript_id "g321.t1"; gene_id "g321"; Scaffold_6 AUGUSTUS CDS 1362435 1362802 1 + 2 transcript_id "g321.t1"; gene_id "g321"; Scaffold_6 AUGUSTUS stop_codon 1362800 1362802 . + 0 transcript_id "g321.t1"; gene_id "g321"; # protein sequence = [MDSVTKSLTSLSLNPTSVNHSSTNSPAAWRDALTANPEVPTSFELIKTLVYKPKTAKASTPVPVVVIARESVSVNSGA # IGKRLNLKDLRLASEDLLKEFFSLDKDSLSPLALSETNFSKVVTVVDASIATTPAPLALHALTSSATVFLSSSDLLKYLRHLETENTKLQELDLQNLE # TAAPAATPSKAPSKEKEDAKIEGAVKIAIGVKKEVDFSTWYTNVSSYDLFIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g321 ### # start gene g322 Scaffold_6 AUGUSTUS gene 1363597 1363971 1 + . g322 Scaffold_6 AUGUSTUS transcript 1363597 1363971 1 + . g322.t1 Scaffold_6 AUGUSTUS start_codon 1363597 1363599 . + 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_6 AUGUSTUS CDS 1363597 1363971 1 + 0 transcript_id "g322.t1"; gene_id "g322"; Scaffold_6 AUGUSTUS stop_codon 1363969 1363971 . + 0 transcript_id "g322.t1"; gene_id "g322"; # protein sequence = [MFNIVVEDPTDPTNQRKTYVWQNSWGISTRAIGVMVMVHGDNQGLVLPPRVASIQVVVVPCGITVNTSSETRSRIESA # CEELAKTLKKGGIKVKADLRDDKTPGYKFNDWEQKVICTFDVRFGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g322 ### # start gene g323 Scaffold_6 AUGUSTUS gene 1364655 1366368 0.82 - . g323 Scaffold_6 AUGUSTUS transcript 1364655 1366368 0.82 - . g323.t1 Scaffold_6 AUGUSTUS stop_codon 1364655 1364657 . - 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_6 AUGUSTUS CDS 1364655 1365991 0.99 - 2 transcript_id "g323.t1"; gene_id "g323"; Scaffold_6 AUGUSTUS CDS 1366080 1366368 0.82 - 0 transcript_id "g323.t1"; gene_id "g323"; Scaffold_6 AUGUSTUS start_codon 1366366 1366368 . - 0 transcript_id "g323.t1"; gene_id "g323"; # protein sequence = [MIGTNKLPTKGDEQVIDIELDKDTVLKPAKTGYPPVKARSHWENMSNIKSSTNIKHKLDDPAPLNAVEPNIPGKLSDL # SDYHSSQIFPSRLISRLGSDIPQNDRKMASDIPYKLPADSNQLKALIIGRRKAIEVSALHFGPWFIRSCDVQWARAKALQGAYTHHIEVLRERNPCSH # LIPLTTGDVYAWLEDNRHFVREEPTRTQVNELDSRQDGNLVIGDYSGGKWCRVCGLGLWAHGMQGLEYMKTGAELAVVAATQAKEAEDNQPRLPRIKI # RLLNGKVVGGGGPSVPAPPLRPEPFQCRIVDKMLQLLKMPVVDVQRIFRVHTQQGIEQTPSTVSSLNPRQLPPWSSRTHLLVRDHSTLVAAVDPRMTL # GVRALVHPLSLRSFCLPSSPTLFPLDRLGGNAAEVEANLSPYALLALAAKQFIRVLIKEATEVEKRDKELGVGLLFETHHRDVSLLASGPSSRKYKTV # PGTNGRKGREKEKIKIQSIKVLTPMHIITGVVSSYVRATALASVPSEGRPGVPVSSMMVVSVLLCLDACPD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g323 ### # start gene g324 Scaffold_6 AUGUSTUS gene 1366738 1367697 0.9 - . g324 Scaffold_6 AUGUSTUS transcript 1366738 1367697 0.9 - . g324.t1 Scaffold_6 AUGUSTUS stop_codon 1366738 1366740 . - 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_6 AUGUSTUS CDS 1366738 1367697 0.9 - 0 transcript_id "g324.t1"; gene_id "g324"; Scaffold_6 AUGUSTUS start_codon 1367695 1367697 . - 0 transcript_id "g324.t1"; gene_id "g324"; # protein sequence = [MCLRSPFRDVALNTLSILESSSDILFARDVIVVPPTNIAPKGRLPPKEKPITRSQKSKFLFLRSQDSHRVVLLRCSIC # HQSTFNTLQGLYNHGRILHSTDWGSHEQCIKACAVPQEELDADLDLEGGVDVSRGMLLPGVKGLFQMAVEGTRDENPTSASSELEVNEPVGRSIHLTK # TLGLHSDSPALAQFLGKEAKRKGIKVWDNGKHIDITTFDGKDSPLALKKSWKKRYNHRNRPLVEEGVIMTNDKRSQLAANSTSFIDSTITATSRFHIS # CRITLTDSSLFIPEGLFSFLWFASPRSPYSQTSVSKKKKTIHING] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g324 ### # start gene g325 Scaffold_6 AUGUSTUS gene 1367932 1368432 0.95 + . g325 Scaffold_6 AUGUSTUS transcript 1367932 1368432 0.95 + . g325.t1 Scaffold_6 AUGUSTUS start_codon 1367932 1367934 . + 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_6 AUGUSTUS CDS 1367932 1368432 0.95 + 0 transcript_id "g325.t1"; gene_id "g325"; Scaffold_6 AUGUSTUS stop_codon 1368430 1368432 . + 0 transcript_id "g325.t1"; gene_id "g325"; # protein sequence = [MKVIRNKEAKRLFSGKFGPTDVGGKFKQTSMAVELTDTTPPSSAIPRPDPRNLTSLPQILSSLSDFESQEAELSTSLT # DLLAASEPITQSLSRLQSLAPQFDDLLKNASILSHNVSSTAKTAERIGGRVQSLDEEMRRIREAGDRVGQVIDLKVCYAIHTTVNIRR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g325 ### # start gene g326 Scaffold_6 AUGUSTUS gene 1369208 1369531 0.79 + . g326 Scaffold_6 AUGUSTUS transcript 1369208 1369531 0.79 + . g326.t1 Scaffold_6 AUGUSTUS start_codon 1369208 1369210 . + 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_6 AUGUSTUS CDS 1369208 1369531 0.79 + 0 transcript_id "g326.t1"; gene_id "g326"; Scaffold_6 AUGUSTUS stop_codon 1369529 1369531 . + 0 transcript_id "g326.t1"; gene_id "g326"; # protein sequence = [MSSIAAAARRPQAASNQDDELIDPREIDQVIIEMSGMVGRWNLFKKFLLDSFEAPDPTSASLPLESTASQMVFDEVLV # KYYIPLEVWYVRAIIDKVILNEPRTSPDY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g326 ### # start gene g327 Scaffold_6 AUGUSTUS gene 1369573 1369890 0.51 + . g327 Scaffold_6 AUGUSTUS transcript 1369573 1369890 0.51 + . g327.t1 Scaffold_6 AUGUSTUS start_codon 1369573 1369575 . + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_6 AUGUSTUS CDS 1369573 1369890 0.51 + 0 transcript_id "g327.t1"; gene_id "g327"; Scaffold_6 AUGUSTUS stop_codon 1369888 1369890 . + 0 transcript_id "g327.t1"; gene_id "g327"; # protein sequence = [MTQSATTTTTPDDVFYILKVVLLRLSSTGSLNAVERMAEQLRDILEKDYAVVLKKKMDEVYRSAGTSGQLVRGEKADR # ENRLAFAVSDIYIYSQLKLNPYLGYPQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g327 ### # start gene g328 Scaffold_6 AUGUSTUS gene 1370822 1371433 0.98 - . g328 Scaffold_6 AUGUSTUS transcript 1370822 1371433 0.98 - . g328.t1 Scaffold_6 AUGUSTUS stop_codon 1370822 1370824 . - 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_6 AUGUSTUS CDS 1370822 1371433 0.98 - 0 transcript_id "g328.t1"; gene_id "g328"; Scaffold_6 AUGUSTUS start_codon 1371431 1371433 . - 0 transcript_id "g328.t1"; gene_id "g328"; # protein sequence = [MYRNSTRCGHNFKLSDSGSKRSEVINKWQMQCEVPLECVLSNVQDYGLLDWLPQAMGAMNRGLNLPAIQRIMTEFEKE # SSMMDMKEEMMSDAVDDVMDDEEDEEEEGDKILKEVLDEIGVSLSQQVFSTIDSYLLAHTALQLTDAPTGLASVSAHVTRQPVALGETAGAFHGGVDD # RTGDNSGGGGASDEDALQARLDALRRG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g328 ### # start gene g329 Scaffold_6 AUGUSTUS gene 1377474 1378422 0.85 + . g329 Scaffold_6 AUGUSTUS transcript 1377474 1378422 0.85 + . g329.t1 Scaffold_6 AUGUSTUS start_codon 1377474 1377476 . + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_6 AUGUSTUS CDS 1377474 1377671 0.85 + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_6 AUGUSTUS CDS 1377721 1378422 0.85 + 0 transcript_id "g329.t1"; gene_id "g329"; Scaffold_6 AUGUSTUS stop_codon 1378420 1378422 . + 0 transcript_id "g329.t1"; gene_id "g329"; # protein sequence = [MSLLFNECVPVHTGFTFYDSSIDDPDTALLGSNLWDRLLTDDHEFYISISSLSSPAIICLARRHDSAQDGLVIPRKWL # THHKHIFGSVQYVHVTRTVPVPLTEVYVSALSPAAYDAAITHDALLESHLCSKKQILRQGSVYSIRPDALVESPSDHRLEFRLDMLEPVSQGYAEAGR # TTLFVTSLTDTSEDEDEDGETDSSTLGLSSDDESVEISHDFLANSVVYPAYNPISPSISNPSVDLHAEGDLHFKVHALSNPVSILHDDYTVYLRTADL # GRLGVLSGDWVRVIVIIVPGLIDAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g329 ### # start gene g330 Scaffold_6 AUGUSTUS gene 1378891 1379274 0.51 + . g330 Scaffold_6 AUGUSTUS transcript 1378891 1379274 0.51 + . g330.t1 Scaffold_6 AUGUSTUS start_codon 1378891 1378893 . + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_6 AUGUSTUS CDS 1378891 1379274 0.51 + 0 transcript_id "g330.t1"; gene_id "g330"; Scaffold_6 AUGUSTUS stop_codon 1379272 1379274 . + 0 transcript_id "g330.t1"; gene_id "g330"; # protein sequence = [MDQNRFPATPTRPNEVVFFMITNVEYKVPPNDSSNPTVDTYFGSTVGELGCWFDPDSTRMVQAGVDHSFVPDVGGYFG # SGNIGLSKISPFFKYHSFQFEYHRSLKDRGRQLGNSHIVRRSGTPSSRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g330 ### # start gene g331 Scaffold_6 AUGUSTUS gene 1379747 1380751 0.59 + . g331 Scaffold_6 AUGUSTUS transcript 1379747 1380751 0.59 + . g331.t1 Scaffold_6 AUGUSTUS start_codon 1379747 1379749 . + 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_6 AUGUSTUS CDS 1379747 1380751 0.59 + 0 transcript_id "g331.t1"; gene_id "g331"; Scaffold_6 AUGUSTUS stop_codon 1380749 1380751 . + 0 transcript_id "g331.t1"; gene_id "g331"; # protein sequence = [MVERVPSGLLVCLKHEVSFEVRRSEEELHQLSKLGFQAPDEFERYAILDILLQNTRIAPDVSLSHLAQQTAAFLPGDL # CDLVSRAEAAAVNRAGLSLCVNRWFRCHVTYARVFSGSDQSSVFVAGLSLTNADFTQALDQARASYSESIGAPKIPSVSWDDVGGLAQVKADILDTIQ # LPLDHPELFADGLKKRSGILLYGPPGTGKTLVAKAVATSFSLNFFSIKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSIAPKRGNQGDSG # GVMDRIVSQLLAELDGAGTTADVFVIGATNRPDLLDAALLRPGRYVYIAHIILLSRMKFD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g331 ### # start gene g332 Scaffold_6 AUGUSTUS gene 1387040 1387669 0.98 + . g332 Scaffold_6 AUGUSTUS transcript 1387040 1387669 0.98 + . g332.t1 Scaffold_6 AUGUSTUS start_codon 1387040 1387042 . + 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_6 AUGUSTUS CDS 1387040 1387669 0.98 + 0 transcript_id "g332.t1"; gene_id "g332"; Scaffold_6 AUGUSTUS stop_codon 1387667 1387669 . + 0 transcript_id "g332.t1"; gene_id "g332"; # protein sequence = [MSSTTISTTPSFKVLTKDNYNDWQGNMKASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQ # VPIKAHQEDPIRMWSILEKQHVSKKPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMALI # RALPEEYRHLSSNLLTVIYHHLGWHHQMGQTSF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g332 ### # start gene g333 Scaffold_6 AUGUSTUS gene 1392638 1393840 0.13 + . g333 Scaffold_6 AUGUSTUS transcript 1392638 1393840 0.13 + . g333.t1 Scaffold_6 AUGUSTUS start_codon 1392638 1392640 . + 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_6 AUGUSTUS CDS 1392638 1392940 0.13 + 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_6 AUGUSTUS CDS 1393325 1393840 0.96 + 0 transcript_id "g333.t1"; gene_id "g333"; Scaffold_6 AUGUSTUS stop_codon 1393838 1393840 . + 0 transcript_id "g333.t1"; gene_id "g333"; # protein sequence = [MAPSETTSVQATAPIRQTTPVQFMTEMVRNYIDYAAMLEEKEREQNEQESDDDTDMEGTTNLGHRLHLYLYVKLSKIS # VHPQQDFLSTTPPLNPPRNLLRLGVRIESQQAGVILSNIYAVQVNKQLQAKEAKDKGKGKTKLMGDGKAKLFTGDEFFRLCEEHEKQQKEDAENAIER # RNFRQIHAERLAEWKKENEAIKERNKLKKADYDLAVVAWEEEKAKAKEEKRKPRWNKPKWREDFKPETLKQRPKKNVEGEEEDDESDESGDEHELN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g333 ### # start gene g334 Scaffold_6 AUGUSTUS gene 1394116 1394972 0.66 + . g334 Scaffold_6 AUGUSTUS transcript 1394116 1394972 0.66 + . g334.t1 Scaffold_6 AUGUSTUS start_codon 1394116 1394118 . + 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_6 AUGUSTUS CDS 1394116 1394308 0.67 + 0 transcript_id "g334.t1"; gene_id "g334"; Scaffold_6 AUGUSTUS CDS 1394389 1394972 0.91 + 2 transcript_id "g334.t1"; gene_id "g334"; Scaffold_6 AUGUSTUS stop_codon 1394970 1394972 . + 0 transcript_id "g334.t1"; gene_id "g334"; # protein sequence = [MMVDDCMQDNLDKEKILAAFLAEQQNQEHAEQQSVNRAAQAASSSNKKKNNYRAPVRTGEPKDYSNKAKVTEVDDDGV # TESAGSATASSLSNVLSALSFADTMEWNTDTGATSHMTPHRNWIRNYTPHRVPIRLADHTVVYSEGMGEVLFTPIVDGKEARQVLFSRVLHVPSLNNN # LLSVLYLTKHKGFTVQILKDTMEFTLNGSVLFTASVNNKSVGYLNGLPMPIFTHREVFSHKLGQSPIKLNASCRAIRPMRCC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g334 ### # start gene g335 Scaffold_6 AUGUSTUS gene 1401590 1402803 0.53 + . g335 Scaffold_6 AUGUSTUS transcript 1401590 1402803 0.53 + . g335.t1 Scaffold_6 AUGUSTUS start_codon 1401590 1401592 . + 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_6 AUGUSTUS CDS 1401590 1401857 0.78 + 0 transcript_id "g335.t1"; gene_id "g335"; Scaffold_6 AUGUSTUS CDS 1401899 1402803 0.53 + 2 transcript_id "g335.t1"; gene_id "g335"; Scaffold_6 AUGUSTUS stop_codon 1402801 1402803 . + 0 transcript_id "g335.t1"; gene_id "g335"; # protein sequence = [MSSTTISTTPSFKVLTKDNYNDWQGNMKASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQ # VPIKAHQEDPIPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMALIRALPEEYRHLSSNL # LMQDNLDKEKILAAFLAEQQNQEHAEQQSVNRAAQAASSSNKKKNNYRAPVRTGEPKDYCKWCGKKAVHWQEDCPSNPHNKRKGIQANKAKVTEVDDD # GVTESAGSATASSLSNVLSASSFADTMEWNTDTGATSHMTPHRHWIRNYTPHRVPIRLADHTVVYSEGMGEVLFTPIVDGKEARQVLFSRVLHVPSLN # NLLSVLYSPSTKVLLYKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g335 ### # start gene g336 Scaffold_6 AUGUSTUS gene 1403022 1403462 0.72 + . g336 Scaffold_6 AUGUSTUS transcript 1403022 1403462 0.72 + . g336.t1 Scaffold_6 AUGUSTUS start_codon 1403022 1403024 . + 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_6 AUGUSTUS CDS 1403022 1403462 0.72 + 0 transcript_id "g336.t1"; gene_id "g336"; Scaffold_6 AUGUSTUS stop_codon 1403460 1403462 . + 0 transcript_id "g336.t1"; gene_id "g336"; # protein sequence = [MVEGFKLESSAKPDPVCEPCLGGKMHANPFPSTETRASEVLELVFTDVHDTGIISHEGYRYWIPFICDKARFRAVIPM # KKKSDAFAAFKRFKAWAEKVTGLKVKILRHDKGGEYISKEFEKFLQDEGSKYNARPEIDLSKMESLKG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g336 ### # start gene g337 Scaffold_6 AUGUSTUS gene 1403492 1405822 0.3 + . g337 Scaffold_6 AUGUSTUS transcript 1403492 1405822 0.3 + . g337.t1 Scaffold_6 AUGUSTUS start_codon 1403492 1403494 . + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_6 AUGUSTUS CDS 1403492 1404159 0.97 + 0 transcript_id "g337.t1"; gene_id "g337"; Scaffold_6 AUGUSTUS CDS 1404263 1404577 0.62 + 1 transcript_id "g337.t1"; gene_id "g337"; Scaffold_6 AUGUSTUS CDS 1404665 1405141 0.46 + 1 transcript_id "g337.t1"; gene_id "g337"; Scaffold_6 AUGUSTUS CDS 1405318 1405822 0.98 + 1 transcript_id "g337.t1"; gene_id "g337"; Scaffold_6 AUGUSTUS stop_codon 1405820 1405822 . + 0 transcript_id "g337.t1"; gene_id "g337"; # protein sequence = [MLLESGLPKTFWVECLAALVYVLNRCPTSAVPDVTPYEVFYKKKPNVENLRVWGCMAYVHVQKDKRLHLGSHMEKCVF # IGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTPKQQPLKVTSSAPNELFTLPIPIDESESDSESNSEVDKGNAPNS # PRLEHTPGPDIPVTEDESDEQPIAIRRPVRTRKPPVNGGKPNHPHLVEAMHSSEAFKWEEAMNDEISAHLANNTWDIVDLPPGAKAIGSTWVFRIKHN # ADGSIERFKARLCAQGFSQRPGFDYLETYASTLRWSSLRLVLALAAIDDMELALKSLQAKQVHLWFEAVPRLWSEKLCSVLVKLGFKRLESDPCVYLF # QRGDIKVIVPVWVDDITSSKNSGVLNKFVIELSKELKLRDLGETTFLLGIGIRRDRPNRKLYLNAKQYIIRKLDEFGMQDSKPVKTPLNPNVTLSKED # SPQTPEDKEAMINVPYIPTAPDLITAISDSDLGGNKDNGKSTTGYIIKIGSGAVSWSSKLQPVVTLSSTEAEFVASNAVGKEVLAIRSLLTELGYKVA # SPTIIHVDNQSSIQVAKNPEHHGRMKHLDRTFYWLREQVIHGKLAPSYLPTEDNPADLLTKALAIPKVDKFRTMIGLVKPITSDDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g337 ### # start gene g338 Scaffold_6 AUGUSTUS gene 1408401 1409170 0.36 - . g338 Scaffold_6 AUGUSTUS transcript 1408401 1409170 0.36 - . g338.t1 Scaffold_6 AUGUSTUS stop_codon 1408401 1408403 . - 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_6 AUGUSTUS CDS 1408401 1408947 1 - 1 transcript_id "g338.t1"; gene_id "g338"; Scaffold_6 AUGUSTUS CDS 1408992 1409170 0.36 - 0 transcript_id "g338.t1"; gene_id "g338"; Scaffold_6 AUGUSTUS start_codon 1409168 1409170 . - 0 transcript_id "g338.t1"; gene_id "g338"; # protein sequence = [MASVVSCGEPTKQLTPNPAMRSLSTVDQRVKTALAGPRSLAGTKRAAPESNSGSSNSIPRNHPSQLQSTYTAPPLPSP # PEHLLNNPQIQSTLKAMAPYIKVETPFNVDRLENLLASHPNQPFVASVMRSLREGFWPFYEAEWEVESKQKLDNYVSEPQDFAALRAHRDQEVAAGRW # SEALPEDFVLLPGMKVSPMFVVWQKGKPRVVMDHTGSGLNDNIPKAEGKSSMMICTPLVKYLMIS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g338 ### # start gene g339 Scaffold_6 AUGUSTUS gene 1412174 1412910 0.28 - . g339 Scaffold_6 AUGUSTUS transcript 1412174 1412910 0.28 - . g339.t1 Scaffold_6 AUGUSTUS stop_codon 1412174 1412176 . - 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_6 AUGUSTUS CDS 1412174 1412318 0.63 - 1 transcript_id "g339.t1"; gene_id "g339"; Scaffold_6 AUGUSTUS CDS 1412468 1412910 0.34 - 0 transcript_id "g339.t1"; gene_id "g339"; Scaffold_6 AUGUSTUS start_codon 1412908 1412910 . - 0 transcript_id "g339.t1"; gene_id "g339"; # protein sequence = [MAYVHVQKDKRLHLGSHMEKCVFIGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTP # KQQPLKVTSSAPNELFTLPIPIDESESDSESNSEVDKGNAPNSPRLEHTPGPDIPVTEDESDEPIAIRRPEAMHSSEAFKWEEAMNDEISAHLQTTLG # ISLDLPPGEKQLVNLGIPY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g339 ### # start gene g340 Scaffold_6 AUGUSTUS gene 1413140 1414908 0.52 - . g340 Scaffold_6 AUGUSTUS transcript 1413140 1414908 0.52 - . g340.t1 Scaffold_6 AUGUSTUS stop_codon 1413140 1413142 . - 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_6 AUGUSTUS CDS 1413140 1413693 0.73 - 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_6 AUGUSTUS CDS 1413832 1413841 0.55 - 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_6 AUGUSTUS CDS 1413921 1414144 0.55 - 2 transcript_id "g340.t1"; gene_id "g340"; Scaffold_6 AUGUSTUS CDS 1414224 1414908 0.99 - 0 transcript_id "g340.t1"; gene_id "g340"; Scaffold_6 AUGUSTUS start_codon 1414906 1414908 . - 0 transcript_id "g340.t1"; gene_id "g340"; # protein sequence = [MTGREHEASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQQVPIKAHQEDPIRMWSILEQQH # VSKKPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMALIRALPEEYRHLSSNLLMQDNLD # KEKILAAFLAEQQNQEHAEQQSVNRAAQAASSSNKKKNNYRAPVRTGEPKDYSNKAKVTEVDDDGVTESAGSATASSLSNVLSASSFADTMEWNTDTG # ATSHMTPHRNWIRNYTPHRVPIRLADHTVSLTFGYLNGLTISNGTEDESAHIGGTTLPLNLELWHRRFFHYNYGDVSKLSKNKMVEGFKLESSAKPDP # VCEPCLGGKMHANPFPSTETRASEVLELVFTDVHDTGIISHEGYRYWIPFICDKARFRAVIPMKKKSDAFAAFKRFKAWAEKVTGLKVKILRHDKGGE # YISKEFEKFYKMKDRSTTHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g340 ### # start gene g341 Scaffold_6 AUGUSTUS gene 1420813 1422596 0.27 + . g341 Scaffold_6 AUGUSTUS transcript 1420813 1422596 0.27 + . g341.t1 Scaffold_6 AUGUSTUS start_codon 1420813 1420815 . + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_6 AUGUSTUS CDS 1420813 1421094 0.29 + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_6 AUGUSTUS CDS 1421502 1422596 0.85 + 0 transcript_id "g341.t1"; gene_id "g341"; Scaffold_6 AUGUSTUS stop_codon 1422594 1422596 . + 0 transcript_id "g341.t1"; gene_id "g341"; # protein sequence = [MPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEE # LSDRLGNLEAHRKMMSDVSSIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELAALSPAIRKIIMRKIRNRRVR # PRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEDLWQDQTDMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDDERRNIAIVANQSVAYEDHS # DHPVVVANQSNGLRAVTPEINNKDEEIESVLDQGSQIVVIDRLIAIGLGITWDPEFTIRMQDASGKLNQTLGLARNIPFKFGEVTVYLQLHVQNKAPF # QVLLGRPFDVLVESEIKTFGNGDSEITISDPNSHKRVTVGTYPRGQKGRNIQINTSRYNEPKNVTPDSEKATGEHDSKGNFHSSMS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g341 ### # start gene g342 Scaffold_6 AUGUSTUS gene 1424547 1426102 0.26 - . g342 Scaffold_6 AUGUSTUS transcript 1424547 1426102 0.26 - . g342.t1 Scaffold_6 AUGUSTUS stop_codon 1424547 1424549 . - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_6 AUGUSTUS CDS 1424547 1424900 0.31 - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_6 AUGUSTUS CDS 1425831 1425862 0.73 - 2 transcript_id "g342.t1"; gene_id "g342"; Scaffold_6 AUGUSTUS CDS 1425929 1425932 0.73 - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_6 AUGUSTUS CDS 1426085 1426102 0.73 - 0 transcript_id "g342.t1"; gene_id "g342"; Scaffold_6 AUGUSTUS start_codon 1426100 1426102 . - 0 transcript_id "g342.t1"; gene_id "g342"; # protein sequence = [MTRVNILMITRSDEALCNKSLRDWRKVIKRSTLKFEAGRAGYHLPYHKGDPFYQGTDILFCSQQVADPVTLLKEYATA # RDKLHGARPALFILEDGNVPTRGWFDSMFFAVLSKEFGGHSGVLGALLSMQDSDFKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g342 ### # start gene g343 Scaffold_6 AUGUSTUS gene 1426412 1427263 0.92 + . g343 Scaffold_6 AUGUSTUS transcript 1426412 1427263 0.92 + . g343.t1 Scaffold_6 AUGUSTUS start_codon 1426412 1426414 . + 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_6 AUGUSTUS CDS 1426412 1427263 0.92 + 0 transcript_id "g343.t1"; gene_id "g343"; Scaffold_6 AUGUSTUS stop_codon 1427261 1427263 . + 0 transcript_id "g343.t1"; gene_id "g343"; # protein sequence = [MSSSTTISTTPSFKVLNKDNYNDWKGNMKASLMSHGLWRLVSGKEKQPPASDTEKLEKWELKAEKAAGLIYLAVSPAQ # QVPIKAHQEDPIRMWSILEQQHVSKKPGARFNAYNALFTITKSADESLMDMAARVEAAMADIQNLRPPVAPIAVQSNGLPALGFTLDSLDSELQSMAL # SSVLYQREYRHLSSNLLMQDNLDKEKILAAFLAEQQNQEHAEQQSVNRAAQAASSSNKKKNNYRAPVRTGEPKDYCKWCGKKAVHWQEDCPSNPTTKG # KAFKPIKLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g343 ### # start gene g344 Scaffold_6 AUGUSTUS gene 1427643 1428290 0.85 + . g344 Scaffold_6 AUGUSTUS transcript 1427643 1428290 0.85 + . g344.t1 Scaffold_6 AUGUSTUS start_codon 1427643 1427645 . + 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_6 AUGUSTUS CDS 1427643 1428290 0.85 + 0 transcript_id "g344.t1"; gene_id "g344"; Scaffold_6 AUGUSTUS stop_codon 1428288 1428290 . + 0 transcript_id "g344.t1"; gene_id "g344"; # protein sequence = [MEFTLNGSVLFTASVNNKSVGYLNGLTISNGTEDESAHIGGTTLPLNLELWHRRFFHYNYGDVSKLSKNKMVEGFKLE # SSAKPDPVCEPCLGGKMHANPFPSTETRASEVLELVFTDVHDTGIISHEGYRYWIPFICDKARFRAVIPMKKKSDAFAAFKRFKAWAEKVTGLKVKIL # RHDKGGEYISKEFEKFLQDEGSKYKYTHGQKSTSAKWSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g344 ### # start gene g345 Scaffold_6 AUGUSTUS gene 1428328 1429002 0.25 + . g345 Scaffold_6 AUGUSTUS transcript 1428328 1429002 0.25 + . g345.t1 Scaffold_6 AUGUSTUS start_codon 1428328 1428330 . + 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_6 AUGUSTUS CDS 1428328 1429002 0.25 + 0 transcript_id "g345.t1"; gene_id "g345"; Scaffold_6 AUGUSTUS stop_codon 1429000 1429002 . + 0 transcript_id "g345.t1"; gene_id "g345"; # protein sequence = [MLLESGLPKTFWVECLAALVYVLNRCPTSAVPDVTPYEVFYKKKPNVENLRVWGCMAYVHVQKDKRLHLGSHMEKCVF # IGYPEGVKGWKFWNPVTKKVIISERADFDERYMYASKSPDKPTLRKDYVPPETTPKQQPLKVTSSAPNELFTLPIPIDESESDSESNSEVDKGNAPNS # PRLEHTPGPDIPVTEDESDEPIAIRRPYELGNLRVNGGKPNHPSRVPA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g345 ### # start gene g346 Scaffold_6 AUGUSTUS gene 1431177 1432145 0.63 - . g346 Scaffold_6 AUGUSTUS transcript 1431177 1432145 0.63 - . g346.t1 Scaffold_6 AUGUSTUS stop_codon 1431177 1431179 . - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_6 AUGUSTUS CDS 1431177 1432145 0.63 - 0 transcript_id "g346.t1"; gene_id "g346"; Scaffold_6 AUGUSTUS start_codon 1432143 1432145 . - 0 transcript_id "g346.t1"; gene_id "g346"; # protein sequence = [MDHTGSGLNDNIPKAEGKVKYDDMHTFGQVLNDILKEHPDEELILFKSDVSKAFLNLPGHPLWQLCQVVEVDGRYHIV # RRLVFGTRTSPRCWCSLSSLMCWFGSEKLGIIGLHVYMDDFYGWDFKRNLLLFHDQLRPKRQVQLLVFWDMILCPYEDKKQEHGVTLKIIGFWVDIVK # GSISLSSESIQGLVADITSFLSSPKRQAALRDWQHLAGSLNWSLNVLPWARPALTEMYRKMSGKTLQFRAIPINGEVYRDLTWFSDLLQTAIGIRFVD # AQRWHDSEADFVGWTDASNIGLSYVYAGNGFCYQLHPTEGSVEGDCTC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g346 ### # start gene g347 Scaffold_6 AUGUSTUS gene 1432696 1434397 0.42 - . g347 Scaffold_6 AUGUSTUS transcript 1432696 1434397 0.42 - . g347.t1 Scaffold_6 AUGUSTUS stop_codon 1432696 1432698 . - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_6 AUGUSTUS CDS 1432696 1433806 0.43 - 1 transcript_id "g347.t1"; gene_id "g347"; Scaffold_6 AUGUSTUS CDS 1433928 1434397 0.99 - 0 transcript_id "g347.t1"; gene_id "g347"; Scaffold_6 AUGUSTUS start_codon 1434395 1434397 . - 0 transcript_id "g347.t1"; gene_id "g347"; # protein sequence = [MAPERSTSPDPLASYDISPSAPQIALDKAQIASDKPLQRSQTLPSTSSTQISLDKGKGRAQPAQSTSYIASRPSPELR # SVRIRPRTLQERLQVIPEAGTAPQVTGSEHREASIALSTHSHHSSHQIPLQDRISAAPRLLILEQVRLTAEALGQVVEQASRERVAAAKAARVAAAAA # SKSRISDGPLVSTEKAVNEAAWALMERELAENALQLASAEAEADQMEQDAHSGQKQLFATSSSQTCWSNSELLLSWYILWTPSQSSGGSSSSLCTHSS # DILSPTVSETWKLRMLFTVDSHVDTTVSLLSAQPFTDPLPQSLLKLIVKDRYVDFEKIHASITSYTSIFDDSTTFGSEYKLVKKEHSIRSLPVTSEAQ # WLRVFDAWLAPVLKIYPHRQSELSAYKASIMEFFRAAPSDPSIAFRVDREARQKASNTPFDLGNAENFRLLLLKELLSARKRPSSSPSTSSASKRQDT # PCILWNEGKCTSPCPNRRKHGFCSVCGEPHKAVDSQSCYEKLKHSRSEGKNRSGRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g347 ### # start gene g348 Scaffold_6 AUGUSTUS gene 1436730 1437746 0.74 + . g348 Scaffold_6 AUGUSTUS transcript 1436730 1437746 0.74 + . g348.t1 Scaffold_6 AUGUSTUS start_codon 1436730 1436732 . + 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_6 AUGUSTUS CDS 1436730 1437746 0.74 + 0 transcript_id "g348.t1"; gene_id "g348"; Scaffold_6 AUGUSTUS stop_codon 1437744 1437746 . + 0 transcript_id "g348.t1"; gene_id "g348"; # protein sequence = [MPEEHIAQVVLEWPSCRDKTEVRAFLGTASQLRMFIANFAKKAALLTKLTSNVPFEWNEKCDKAMDELKDGIGDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGPN # ATINHWIEHVRNYHFTLIHVKGATHGSDGLSRITPGGWQTKRPEVNPDDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEANDI # ELDVQEALDEERSYEIRRNHMLESKNATCEVFSRNLFPTFDEEFVKTIHTQKHIDLLRVIDWTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g348 ### # start gene g349 Scaffold_6 AUGUSTUS gene 1440044 1441499 0.22 - . g349 Scaffold_6 AUGUSTUS transcript 1440044 1441499 0.22 - . g349.t1 Scaffold_6 AUGUSTUS stop_codon 1440044 1440046 . - 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_6 AUGUSTUS CDS 1440044 1440471 1 - 2 transcript_id "g349.t1"; gene_id "g349"; Scaffold_6 AUGUSTUS CDS 1441101 1441272 0.22 - 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_6 AUGUSTUS CDS 1441332 1441499 0.6 - 0 transcript_id "g349.t1"; gene_id "g349"; Scaffold_6 AUGUSTUS start_codon 1441497 1441499 . - 0 transcript_id "g349.t1"; gene_id "g349"; # protein sequence = [MPVHHKKDLDVARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLEKPVTLCSHVRQISNLTARQSI # IDTLCLGHKLFPDIVSDSHFEQHLKFMAFANDARVLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRACIAK # VIADKACSILKSRQDSGSDSSGSDASFATAQSIPTTGSEDTVVTPTEIAVPVLKTVERATTPFTHGVTPMMEDKGHISA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g349 ### # start gene g350 Scaffold_6 AUGUSTUS gene 1447067 1449168 0.31 - . g350 Scaffold_6 AUGUSTUS transcript 1447067 1449168 0.31 - . g350.t1 Scaffold_6 AUGUSTUS stop_codon 1447067 1447069 . - 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_6 AUGUSTUS CDS 1447067 1447825 0.49 - 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_6 AUGUSTUS CDS 1447942 1449168 0.62 - 0 transcript_id "g350.t1"; gene_id "g350"; Scaffold_6 AUGUSTUS start_codon 1449166 1449168 . - 0 transcript_id "g350.t1"; gene_id "g350"; # protein sequence = [MTRLTRKGASWIWDSSCQEAFENLKIAFTSAPILAHWEPNRPLIVETDASDYAIAAILSIQYADGEIHPLAFLSRTLH # AAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDVVTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIG # YAQVNPHNFVLSLLTNNSLRLFELPSGRPVLRASIIMDIEALHQAIILALPADPSSVAGLELAKDPSNERWSLGSDKLLRLDDRIYVPNHGDLRLQVL # RYFHDHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDYVTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQ # AIFIPTHDTITSEQLAELFVIHVFSKHGVLIMLLPIVTLEQYIRIYCSYQQDDWSPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKS # DLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRFTGFP # RLTAGAGYAESFPNRTQSPPPPIEVDGEEEYNVAEILDSKLDRRYKRCPLRYYIRWAGYEGTDDEFSWVAADELHADELVPAFHARYPHKPGP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g350 ### # start gene g351 Scaffold_6 AUGUSTUS gene 1451462 1451986 0.89 - . g351 Scaffold_6 AUGUSTUS transcript 1451462 1451986 0.89 - . g351.t1 Scaffold_6 AUGUSTUS stop_codon 1451462 1451464 . - 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_6 AUGUSTUS CDS 1451462 1451986 0.89 - 0 transcript_id "g351.t1"; gene_id "g351"; Scaffold_6 AUGUSTUS start_codon 1451984 1451986 . - 0 transcript_id "g351.t1"; gene_id "g351"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g351 ### # start gene g352 Scaffold_6 AUGUSTUS gene 1453652 1455781 0.99 - . g352 Scaffold_6 AUGUSTUS transcript 1453652 1455781 0.99 - . g352.t1 Scaffold_6 AUGUSTUS stop_codon 1453652 1453654 . - 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_6 AUGUSTUS CDS 1453652 1455781 0.99 - 0 transcript_id "g352.t1"; gene_id "g352"; Scaffold_6 AUGUSTUS start_codon 1455779 1455781 . - 0 transcript_id "g352.t1"; gene_id "g352"; # protein sequence = [MPLRCGSARKWREVFNKGFGAALAEGPATVLEESGQQEILSSPPQGCAVLEEREGPLSGVIVKALTPLSRGVEDLNHV # QQEQDTNDTSQLVPPIKAPQHCRRPQVEDVLDEDPGRPWNTGESVLPIGNEEWQLTEDELDGWFREEQRLRREEAIKWQKELEIWRESRRVAWEEEEA # QREMEWKDWLRRQRAEPGLRRWFFWRNRLKVPQPPKRLSVESPGGSSAPPLREVPAGHTSGDKCDIDPLTTDPRNHHGTCRPTGRAPEEASVTLDKVE # GNSVEGKVDTLPEGPRVDSVGGFEVPPLRGVSVDVLLADLQNADCENIVPIQVLQTEHFSSTEPLGPDFFPDALGQSDDVNLFTRNDGKQGAFCPERV # KEILRKVKIGPDLSDDQRTRVKRLLSEYADCFALSVGEVRPVKDAVHRLNIPEGATFPKKVRQRSLTPPQREYLHAKVDELLEAGVIERCNPEDVKCV # SPLTLAQKAHEGMGLMVEELMHKLNDECMAAGLPTAFDLPTRPQPSDPTERAELTKPAKWRICQNFMAVNKLTEIAPMPQGNIRSKQQSLSGHNYICL # FDFASGFYACEVERDSRPYTAFYVEGKGYFWCAKLPFGLTGAPSTFANMTARHLDDLIADGTIELFVDDGGSADDDFESMFGKLTRILERVRERDLSL # SAAKSEFFMSEGIFAGGKVSKEGVTADPAKLTAIVEWNDLLMP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g352 ### # start gene g353 Scaffold_6 AUGUSTUS gene 1482728 1483270 0.61 - . g353 Scaffold_6 AUGUSTUS transcript 1482728 1483270 0.61 - . g353.t1 Scaffold_6 AUGUSTUS stop_codon 1482728 1482730 . - 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_6 AUGUSTUS CDS 1482728 1483270 0.61 - 0 transcript_id "g353.t1"; gene_id "g353"; Scaffold_6 AUGUSTUS start_codon 1483268 1483270 . - 0 transcript_id "g353.t1"; gene_id "g353"; # protein sequence = [MSIAQTPLLGEENTPMHTNTSGGTGFESATPRHQVAFTPNPLATPLRSGTGDVSATPRDMSVGSTPLRTPLRDNLSIN # PDGFPSIGDTPREQRLQAHSAKRALQTGFMNLPKPENNFELLVPEEEENEGGDGEDRGLVLSEEDAEERDAKLRRARGRRGGEDFVKKNSGCSTWSSS # TCQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g353 ### # start gene g354 Scaffold_6 AUGUSTUS gene 1483353 1483718 0.96 - . g354 Scaffold_6 AUGUSTUS transcript 1483353 1483718 0.96 - . g354.t1 Scaffold_6 AUGUSTUS stop_codon 1483353 1483355 . - 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_6 AUGUSTUS CDS 1483353 1483718 0.96 - 0 transcript_id "g354.t1"; gene_id "g354"; Scaffold_6 AUGUSTUS start_codon 1483716 1483718 . - 0 transcript_id "g354.t1"; gene_id "g354"; # protein sequence = [MENKRKPDAEEAERKKRQRKNGKEGEGPGHQTKFIPARDAQIQKLKEAESISRRRKLMLPSAQVGEAELEEIVKIGQA # GENAKALVGGGSDASGRLLSDYEGLENARMARTPRTAPQGTRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g354 ### # start gene g355 Scaffold_6 AUGUSTUS gene 1485680 1486540 1 + . g355 Scaffold_6 AUGUSTUS transcript 1485680 1486540 1 + . g355.t1 Scaffold_6 AUGUSTUS start_codon 1485680 1485682 . + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_6 AUGUSTUS CDS 1485680 1486540 1 + 0 transcript_id "g355.t1"; gene_id "g355"; Scaffold_6 AUGUSTUS stop_codon 1486538 1486540 . + 0 transcript_id "g355.t1"; gene_id "g355"; # protein sequence = [MLRRLEKGLNSAKSKAFSIDARHSSSYRDSHPSLGEPDDRYTNGVRSHPYSPPNGQFVSNLPPLNLPSYPDAASEYTA # SSTSSRTLDANDDEDDSASDRAEDNIFPANFIQRERRRNSFFRTILNPEDAPASGPSSVRGSETYSPPQSPAAPAGLNDPVSAGIVDEEHAKVLFDLI # FLRLNPFINLFDPSLHTVSYVRNKSPFLFTVLIMAGCKFFRPELFKQCQKLADEYAVQAFREGLKGVEVVQAFACLTYWKGHDDNVSTFQACYSSPVL # TMLPSVRVPGPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g355 ### # start gene g356 Scaffold_6 AUGUSTUS gene 1487862 1488218 1 - . g356 Scaffold_6 AUGUSTUS transcript 1487862 1488218 1 - . g356.t1 Scaffold_6 AUGUSTUS stop_codon 1487862 1487864 . - 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_6 AUGUSTUS CDS 1487862 1488218 1 - 0 transcript_id "g356.t1"; gene_id "g356"; Scaffold_6 AUGUSTUS start_codon 1488216 1488218 . - 0 transcript_id "g356.t1"; gene_id "g356"; # protein sequence = [MDKSTQINAHDFNKYLECLQTELAILMELPKDITSPLVSVPPCHPGLSKSSASIADPAPKNASVQQAYEPHPHELEEK # KVKMITQAILNIHFHDTRKNAKEEEMPEIGQKGNGKPEIG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g356 ### # start gene g357 Scaffold_6 AUGUSTUS gene 1491333 1491695 0.46 - . g357 Scaffold_6 AUGUSTUS transcript 1491333 1491695 0.46 - . g357.t1 Scaffold_6 AUGUSTUS stop_codon 1491333 1491335 . - 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_6 AUGUSTUS CDS 1491333 1491695 0.46 - 0 transcript_id "g357.t1"; gene_id "g357"; Scaffold_6 AUGUSTUS start_codon 1491693 1491695 . - 0 transcript_id "g357.t1"; gene_id "g357"; # protein sequence = [MPGIERFKIAAKQNSNKWYNGYAKLLPVASLGVVQLYDPDAKEFISHPDADEYNPVVDLYGPFAYFLSTVNVDRLEPA # FRITPLAKDIPFANDATCDLVAIRPFSNPTVSIDTPEARDIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g357 ### # start gene g358 Scaffold_6 AUGUSTUS gene 1496129 1496662 0.53 + . g358 Scaffold_6 AUGUSTUS transcript 1496129 1496662 0.53 + . g358.t1 Scaffold_6 AUGUSTUS start_codon 1496129 1496131 . + 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_6 AUGUSTUS CDS 1496129 1496662 0.53 + 0 transcript_id "g358.t1"; gene_id "g358"; Scaffold_6 AUGUSTUS stop_codon 1496660 1496662 . + 0 transcript_id "g358.t1"; gene_id "g358"; # protein sequence = [MQQSTEHLGILNHGERKRQVKRRDRLAKLEEEENNPMKVLENRTTDSKREMDILDALQDIRARNARNERVGNSADLLA # KLDMEEIENEEDLERKRLEEEDEKLVREVFSKIPSMSADSPSEIVTVKRKADAIEPSVHSLLSESSRSLLDLKANVQHNTAKKVKKNTLGIKVVKKQK # T] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g358 ### # start gene g359 Scaffold_6 AUGUSTUS gene 1496900 1497550 0.49 - . g359 Scaffold_6 AUGUSTUS transcript 1496900 1497550 0.49 - . g359.t1 Scaffold_6 AUGUSTUS stop_codon 1496900 1496902 . - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_6 AUGUSTUS CDS 1496900 1497550 0.49 - 0 transcript_id "g359.t1"; gene_id "g359"; Scaffold_6 AUGUSTUS start_codon 1497548 1497550 . - 0 transcript_id "g359.t1"; gene_id "g359"; # protein sequence = [MAKETLEHGIEKVEQSAHNAKEMVKEVVAEGPVVASSGHDSSELPLDQVTNTAHEFAVEDEESEDEGWASDADAALTD # ITAAKKQRSKSPRSKTLKTGGRRRNSIRRGLMGRVMKSTDTSSSSKPSAVDELDERGRNLGHPSSVQPHSSPGSSLRHNRIDSLRTVHSQKSREQSPA # RSIRFFDEAPSSRPGSGTTTPRHESFNLRSTLETQPNEQE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g359 ### # start gene g360 Scaffold_6 AUGUSTUS gene 1502876 1504642 0.47 + . g360 Scaffold_6 AUGUSTUS transcript 1502876 1504642 0.47 + . g360.t1 Scaffold_6 AUGUSTUS start_codon 1502876 1502878 . + 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_6 AUGUSTUS CDS 1502876 1503465 0.47 + 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_6 AUGUSTUS CDS 1503566 1503995 0.74 + 1 transcript_id "g360.t1"; gene_id "g360"; Scaffold_6 AUGUSTUS CDS 1504052 1504642 0.96 + 0 transcript_id "g360.t1"; gene_id "g360"; Scaffold_6 AUGUSTUS stop_codon 1504640 1504642 . + 0 transcript_id "g360.t1"; gene_id "g360"; # protein sequence = [MPVPSTSRIRKTTHTTTSNIRKHAIHPRPLPSPISDPDTLATQLAETLNIEDLTKRKGKQKALCTPEQRLEAMRKINS # ASQQLSAIAQSGWKKSLDAEHQSKSQSTTALEASSTAARCLALLRSASKGDLNVERAAMSIMVKLVALELVRPSFSYLLNNSNTREIVVRFSISSPYK # FTLPDMWSHGGACNSLTLNTALCKDLPNYSSLIEWIPVFSSSGLSDKQLDSTLTKVYSVLMKVSASDIPPNDLFQIRMYALRCLAHTSVGTIENPESL # WDQTCKVASALTGSLNQYSVSDAAYTVSSAFLALYTICEARADKDAFVSGNGFTSYCENWIGYASKTNDVRILQKIGQVMGQSSPPSASTDSHHTLCE # DRDMIRQGTRLCAAFAQLLAVLEQSKQNDDSVILLFRDVRNALFPSEAGAIDPLITNLFALSMQDGVCNKDILRIAGKANRALGRVRRASLDVLAEQS # TGKEVREECSRLLEVVIGLYENVIRTVSELYSHIFYGLRLINGIDRFPSRFRLSNTHVGYNLRTFP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g360 ### # start gene g361 Scaffold_6 AUGUSTUS gene 1506877 1507449 0.93 + . g361 Scaffold_6 AUGUSTUS transcript 1506877 1507449 0.93 + . g361.t1 Scaffold_6 AUGUSTUS start_codon 1506877 1506879 . + 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_6 AUGUSTUS CDS 1506877 1507449 0.93 + 0 transcript_id "g361.t1"; gene_id "g361"; Scaffold_6 AUGUSTUS stop_codon 1507447 1507449 . + 0 transcript_id "g361.t1"; gene_id "g361"; # protein sequence = [MKNALSKSGTPLHSISSQTQPPSTSRRIGDFSQRRILSTGLEWRIGEGLLNALFSLFHAYLERGSPREAQYFAEQAKE # LAASVNAPSGMCRAMVKNVEAKIFQGLIAEGSGQFKEIELCVINGDGDVHADLAELHRLKGDLDQRDSMVIEAQKHYEDAIKVIERVDQTFRLLDGVE # FGYYDDSTYANFSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g361 ### # start gene g362 Scaffold_6 AUGUSTUS gene 1507795 1508145 0.6 + . g362 Scaffold_6 AUGUSTUS transcript 1507795 1508145 0.6 + . g362.t1 Scaffold_6 AUGUSTUS start_codon 1507795 1507797 . + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_6 AUGUSTUS CDS 1507795 1508145 0.6 + 0 transcript_id "g362.t1"; gene_id "g362"; Scaffold_6 AUGUSTUS stop_codon 1508143 1508145 . + 0 transcript_id "g362.t1"; gene_id "g362"; # protein sequence = [MFLSSIGETSGCHFQFHAIAGKLTPISAIALSAGSNNLSVSVSPTSVDIAKNLEHAEKLFWSYLGALGQKGYAPDIRE # SAMSIAIIKTFQASLGKFDAKTPLLAAGLLGKLCGVAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g362 ### # start gene g363 Scaffold_6 AUGUSTUS gene 1508200 1509610 0.83 + . g363 Scaffold_6 AUGUSTUS transcript 1508200 1509610 0.83 + . g363.t1 Scaffold_6 AUGUSTUS start_codon 1508200 1508202 . + 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_6 AUGUSTUS CDS 1508200 1508772 0.83 + 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_6 AUGUSTUS CDS 1508825 1509610 1 + 0 transcript_id "g363.t1"; gene_id "g363"; Scaffold_6 AUGUSTUS stop_codon 1509608 1509610 . + 0 transcript_id "g363.t1"; gene_id "g363"; # protein sequence = [MLEAIVNKFPLIPRHEELAWPKLSDSGVPLLNEPKTALNDSDELDEISLRDYWESVRKRHQSYSMNEETFASSMVSEL # PRHWTVVHISVTEDKNTMFISRQRGGCQAEPLVFCIPLKGRREDAADEHLTFEDALKEMNEIVASSNETTKIAASIRHDPAARSKWWKERGALDSRLR # ELLENIEFCWLGAFKTILSANPHLSPHAISNLRIQFDRVFQRGLRLQDRKTKERAIGHKKMPSESWTPNRVTLDDSLIECFSTLSPDCRDEELEDLVY # FILDLYQFHGVPVAIAEIDIDQVVVDLRSVMQEHAEKLKSVGHGRTGAFGYNERDHHDEHLFLVLDKNVQGLPWENIPILRGRSVSRIPSISFLLDRV # QFARLRQSELGSSSNTVDRAVCDPTNAYYIINPSGDLERTEERFKPWLKKMEKAGWQGISGRAPSELQVLNALRTKDLVV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g363 ### # start gene g364 Scaffold_6 AUGUSTUS gene 1511476 1512540 0.49 + . g364 Scaffold_6 AUGUSTUS transcript 1511476 1512540 0.49 + . g364.t1 Scaffold_6 AUGUSTUS start_codon 1511476 1511478 . + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_6 AUGUSTUS CDS 1511476 1511792 0.89 + 0 transcript_id "g364.t1"; gene_id "g364"; Scaffold_6 AUGUSTUS CDS 1511837 1512067 0.62 + 1 transcript_id "g364.t1"; gene_id "g364"; Scaffold_6 AUGUSTUS CDS 1512168 1512540 0.7 + 1 transcript_id "g364.t1"; gene_id "g364"; Scaffold_6 AUGUSTUS stop_codon 1512538 1512540 . + 0 transcript_id "g364.t1"; gene_id "g364"; # protein sequence = [MFHTYDDHEIINNFSGAGNDSTLPYPSASDAFQIYNANGNPSPPQSTKSLDHTPYYYDFHYGDVAFFVMDTRRYRSFP # TDPSEEKTMLGEEQLTRLLDWLGKVRAFTATFKFIVSSVPFTSLWGHDAQYDSWAGFVNEKQTILNAMYSVPNVFVITGDRHEFAAIEFAAPTQSSFA # VTEFSTSMQSAETFTRKVVKEAPSVDAPIPAPESLPAIPSDEATVVQSDGIPVSTESSVQVPPTSSESANEHNVEKTETEFVIEEVPKERVIKYIPEG # NYKWSSIEVDTRKPERPTLNLEVVIDGKPSYQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g364 ### # start gene g365 Scaffold_6 AUGUSTUS gene 1513467 1514807 0.21 - . g365 Scaffold_6 AUGUSTUS transcript 1513467 1514807 0.21 - . g365.t1 Scaffold_6 AUGUSTUS stop_codon 1513467 1513469 . - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_6 AUGUSTUS CDS 1513467 1513981 0.67 - 2 transcript_id "g365.t1"; gene_id "g365"; Scaffold_6 AUGUSTUS CDS 1514089 1514130 0.48 - 2 transcript_id "g365.t1"; gene_id "g365"; Scaffold_6 AUGUSTUS CDS 1514246 1514807 0.5 - 0 transcript_id "g365.t1"; gene_id "g365"; Scaffold_6 AUGUSTUS start_codon 1514805 1514807 . - 0 transcript_id "g365.t1"; gene_id "g365"; # protein sequence = [MPFYSYIQKWLAPKQLRVPSILVALAQSVHALIPPQTLKPVVLKLANEFVHPGVGSEVIAAGINAITEICRRQPLVMG # PRDEDEDDVMRKQKEHGQKNMDTKDGAENQLEALKLEHLEKEKAEIRKLGIDDADGKRPSDKDVDLRPLLNDLIEYRKSKDKTVIAASRGLLHLYRET # HPEFLKKRERVPNAAVDIEGLSVRSYSGEDNNEAGWDGWDIESDSDSESDSEDGWQDVSSDSDGDIELSDSENENGEQRERNKNKGKETERQERRREK # KEKREKQRAKEEAVKSGRGINGEIDNDEVDENEYGFSGDDQDKMDIDTEEKTETRNFDQDASTLATTKVCLQLVTPDCEIEIIFSFLDSHSSRLQIAL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g365 ### # start gene g366 Scaffold_6 AUGUSTUS gene 1522550 1523185 0.47 + . g366 Scaffold_6 AUGUSTUS transcript 1522550 1523185 0.47 + . g366.t1 Scaffold_6 AUGUSTUS start_codon 1522550 1522552 . + 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_6 AUGUSTUS CDS 1522550 1523185 0.47 + 0 transcript_id "g366.t1"; gene_id "g366"; Scaffold_6 AUGUSTUS stop_codon 1523183 1523185 . + 0 transcript_id "g366.t1"; gene_id "g366"; # protein sequence = [MKLFIHEILPASVKKSIYIDTDAIFISDPTLLWTVFSQLKPTTAFVMSYHPDQDSPVWHQASRICSCVMLLDLEKLRK # LRLMDSSVYREVTDDSYPPALSPPTFRAMYGEPGPDGYKNVKLGDQGYWWAIVDSRKDIFEPLSFDFEVTSCLMDTYSITLGEDGISEVHELPRQSHV # KGTPQEVRLHPSKGCCHELTKDAQGALIRPKVLHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g366 ### # start gene g367 Scaffold_6 AUGUSTUS gene 1524113 1524577 0.67 - . g367 Scaffold_6 AUGUSTUS transcript 1524113 1524577 0.67 - . g367.t1 Scaffold_6 AUGUSTUS stop_codon 1524113 1524115 . - 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_6 AUGUSTUS CDS 1524113 1524577 0.67 - 0 transcript_id "g367.t1"; gene_id "g367"; Scaffold_6 AUGUSTUS start_codon 1524575 1524577 . - 0 transcript_id "g367.t1"; gene_id "g367"; # protein sequence = [MPTRLSREEIPRDPNDANTRSSLRSKTNIRGGAFWVWKLQVTGHLSRIVADTESRTVGNPTSNTPKRSLYRTDASPVR # STPATPFDLLLEHKDMAVPDSPQTPTRKPGLTRIRSEGTQKVVANTSNILKSGKIVSTTVIIISDDEDDSVPAMDP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g367 ### # start gene g368 Scaffold_6 AUGUSTUS gene 1525389 1526061 0.39 - . g368 Scaffold_6 AUGUSTUS transcript 1525389 1526061 0.39 - . g368.t1 Scaffold_6 AUGUSTUS stop_codon 1525389 1525391 . - 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_6 AUGUSTUS CDS 1525389 1525687 0.87 - 2 transcript_id "g368.t1"; gene_id "g368"; Scaffold_6 AUGUSTUS CDS 1525740 1525760 0.83 - 2 transcript_id "g368.t1"; gene_id "g368"; Scaffold_6 AUGUSTUS CDS 1525854 1526061 0.39 - 0 transcript_id "g368.t1"; gene_id "g368"; Scaffold_6 AUGUSTUS start_codon 1526059 1526061 . - 0 transcript_id "g368.t1"; gene_id "g368"; # protein sequence = [MPRKIQDFAQQSLIRPILVNVGRAGAANLDVLQVVEYVKQEAKMVYLLECLQKTPPPVIIFSENKNEVDVAIHGSKTQ # EERQYAIKSFKSGAKDVMVASGVASKGLDFNEIQHVIIFSMPKEIEDYVHQIGRTGRSGKTGIATTFVNMNTPEQTLLDLKYLLMEAGQKWIACYFT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g368 ### # start gene g369 Scaffold_6 AUGUSTUS gene 1535283 1535525 0.83 - . g369 Scaffold_6 AUGUSTUS transcript 1535283 1535525 0.83 - . g369.t1 Scaffold_6 AUGUSTUS stop_codon 1535283 1535285 . - 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_6 AUGUSTUS CDS 1535283 1535525 0.83 - 0 transcript_id "g369.t1"; gene_id "g369"; Scaffold_6 AUGUSTUS start_codon 1535523 1535525 . - 0 transcript_id "g369.t1"; gene_id "g369"; # protein sequence = [MLDGRIDTQGTVADLRASGLLEDITHEAEAEAQKDTQVAVGEVADAEVEAVEGENGNQVTTEKLSKPRKLVEDEKREQ # GG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g369 ### # start gene g370 Scaffold_6 AUGUSTUS gene 1539488 1540063 0.88 + . g370 Scaffold_6 AUGUSTUS transcript 1539488 1540063 0.88 + . g370.t1 Scaffold_6 AUGUSTUS start_codon 1539488 1539490 . + 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_6 AUGUSTUS CDS 1539488 1540063 0.88 + 0 transcript_id "g370.t1"; gene_id "g370"; Scaffold_6 AUGUSTUS stop_codon 1540061 1540063 . + 0 transcript_id "g370.t1"; gene_id "g370"; # protein sequence = [MAGTSSSRRFAQAATPIPAPSKTKASSLGAGLSQTAAPKIKREEHKLEKDEQDEEIYSDADEGVEIIDMENVGQMDWM # APDSIIKEKTKRPKKEDPDATGASCSVSLSRVLTYAVQEVNIANALDGDEDEADEKDLETMFDDFNKMNYVRLGELLPLENALSNSGSRMRTTIHNIY # VSSNFQAHSRRSAHS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g370 ### # start gene g371 Scaffold_6 AUGUSTUS gene 1547919 1548452 0.47 - . g371 Scaffold_6 AUGUSTUS transcript 1547919 1548452 0.47 - . g371.t1 Scaffold_6 AUGUSTUS stop_codon 1547919 1547921 . - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_6 AUGUSTUS CDS 1547919 1548132 0.61 - 1 transcript_id "g371.t1"; gene_id "g371"; Scaffold_6 AUGUSTUS CDS 1548184 1548452 0.47 - 0 transcript_id "g371.t1"; gene_id "g371"; Scaffold_6 AUGUSTUS start_codon 1548450 1548452 . - 0 transcript_id "g371.t1"; gene_id "g371"; # protein sequence = [MRARTSDEKIFQAPKHRIPKQNATPIEVTKPGQHNNGNIEVVEPQTVKPLNIQPKVNVDEVLINGRRYRVPERIILLD # FWNKISKTGGGQDADSRSSSPLTSLSSLEDEEPTHPPSPPTGSSLQSDLEVAQVSKYRCFEHLAYHLILILDALGLQTRSPS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g371 ### # start gene g372 Scaffold_6 AUGUSTUS gene 1551832 1552421 0.47 - . g372 Scaffold_6 AUGUSTUS transcript 1551832 1552421 0.47 - . g372.t1 Scaffold_6 AUGUSTUS stop_codon 1551832 1551834 . - 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_6 AUGUSTUS CDS 1551832 1552247 0.47 - 2 transcript_id "g372.t1"; gene_id "g372"; Scaffold_6 AUGUSTUS CDS 1552298 1552421 0.52 - 0 transcript_id "g372.t1"; gene_id "g372"; Scaffold_6 AUGUSTUS start_codon 1552419 1552421 . - 0 transcript_id "g372.t1"; gene_id "g372"; # protein sequence = [MLQYIKRQQSHKLQAGATQEELDKLLKFPEPIPPTSPKTPPAVLKSSQDQYLCDFERTEIQDYPNVYYIGARSKKHDA # SLDHTTNNYGYDDDRGDYLVVNHDHLAYRYEVIDTLGKGSFGQVLHCRDYCTGESVAIKIIRNKKRFHHQALVEIKILDNLRKWVCDITVMAWSTWAC # SDM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g372 ### # start gene g373 Scaffold_6 AUGUSTUS gene 1552481 1555892 0.11 - . g373 Scaffold_6 AUGUSTUS transcript 1552481 1555892 0.11 - . g373.t1 Scaffold_6 AUGUSTUS stop_codon 1552481 1552483 . - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_6 AUGUSTUS CDS 1552481 1553401 1 - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_6 AUGUSTUS CDS 1553482 1553780 0.46 - 2 transcript_id "g373.t1"; gene_id "g373"; Scaffold_6 AUGUSTUS CDS 1553904 1554390 0.33 - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_6 AUGUSTUS CDS 1554528 1555892 0.36 - 0 transcript_id "g373.t1"; gene_id "g373"; Scaffold_6 AUGUSTUS start_codon 1555890 1555892 . - 0 transcript_id "g373.t1"; gene_id "g373"; # protein sequence = [MTEESGGEEVLYPRKPSTAVPRLPDLPPADTFSSAFSISSAPVDAVVVNSPPPSAFSQPQQRKARKRSSDEFEMDQTG # LLVTRRVSSTDRSKEEKPVSRKHRSVTATVSPPSSRDGRGKERRRESSGLTMSSSSMKLKPHSRHASLSSSSSNMGDNKRATTGADYSHLPPSPSTSS # IQHFLKNTGAGPNTPPLSASKELGHPSPSVAHSLLRGTQEGWSGMGDEATAEALRKLDGLSGKTARARASIGSFGRPHSQSRPGTPASRTGTGTQWEG # VGSSSDGGVKRRGSSHRESANSVKEKESRSVVGLGLGIMGPNLDVEPIGSANPSSDEQPLKYAPSITVEKTPKKSGTASARSSFTPKRGSTSSATNTS # TPTTSSRDSVTMSAATSMTSMSSVRHSVSKTRRKSAGSDVSSIHSSDANSLKDRVASIASNGDGNEDDIVPPVPPLPKICQHITSNRRQSQPIAASEP # PLAVPKTPSKKWSFSNALNLKLTGSPSSKSSGFPVSSQAVAFNSQQSQSHPSQLRKSTSKEQALSPSVVPAKSPWSPRHPDAMGSAASLTSLSSVGSV # RTPAVASTANTPSLSKTPDRSAVSSRAGTNSSASTSHTYAGLSAPQTYAATSPIDSAVTTHPRTKQTSPMPDYATQSTLVPGSAHKKSSVLSLGSLLK # SSSRKSLHGDSSKEVARELQKVRDAAKESEREAVRVDKERQKREDKEGRISTLSAADPKKPRSPPALPPMQMSALEPATAQRVARLKAPGTTATAPTA # SSISRVASTSSRATSQTASSMQKLSDTSLRTRNQLPTIAGSPSVGTITATTKENKEPPPSTLMNTVSGNPKETPTKIPRISSRTSAISPPLKSGNTTR # RASGLVSSTNPSPTASQSTNEFGVIENGDGPTPKMTSKTASTRNSPSAAANTSTSRVPRQVSISTSTSGSILPRKSNRESISFGLRKASTGSVASMST # AANTSTTAMNETSTSHHRFSALSPSRGLKLLSPKISLSSARSSHASSSQSVAPAATRHLVGSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g373 ### # start gene g374 Scaffold_6 AUGUSTUS gene 1555958 1556520 0.75 - . g374 Scaffold_6 AUGUSTUS transcript 1555958 1556520 0.75 - . g374.t1 Scaffold_6 AUGUSTUS stop_codon 1555958 1555960 . - 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_6 AUGUSTUS CDS 1555958 1556434 0.88 - 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_6 AUGUSTUS CDS 1556509 1556520 0.8 - 0 transcript_id "g374.t1"; gene_id "g374"; Scaffold_6 AUGUSTUS start_codon 1556518 1556520 . - 0 transcript_id "g374.t1"; gene_id "g374"; # protein sequence = [MSSFPSVHVELAPSEEEQPVDSDYPQSRAGSATSSLDPYYFGIQSPSDSPVPPLPTSGAFSIRTPNRSPLQEPYTPAK # DPSSIDRRGLVGVGELTTPRWTRNEQAERTPASVDDNEDYQIVASGNENDEQDVPDSPWTIEAVDGEMSEKEEVHFPFATSQCT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g374 ### # start gene g375 Scaffold_6 AUGUSTUS gene 1566157 1566462 0.95 - . g375 Scaffold_6 AUGUSTUS transcript 1566157 1566462 0.95 - . g375.t1 Scaffold_6 AUGUSTUS stop_codon 1566157 1566159 . - 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_6 AUGUSTUS CDS 1566157 1566462 0.95 - 0 transcript_id "g375.t1"; gene_id "g375"; Scaffold_6 AUGUSTUS start_codon 1566460 1566462 . - 0 transcript_id "g375.t1"; gene_id "g375"; # protein sequence = [MLGVKESDTGLASPNLWDLAADRQRMSEEHPLQVARCTKIIPVDPKLAAAKAVNALGALQGQKGADEQDKYVINIRQI # AKFVVGLGERVAPTDIEEGMRVG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g375 ### # start gene g376 Scaffold_6 AUGUSTUS gene 1568479 1568757 0.63 + . g376 Scaffold_6 AUGUSTUS transcript 1568479 1568757 0.63 + . g376.t1 Scaffold_6 AUGUSTUS start_codon 1568479 1568481 . + 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_6 AUGUSTUS CDS 1568479 1568757 0.63 + 0 transcript_id "g376.t1"; gene_id "g376"; Scaffold_6 AUGUSTUS stop_codon 1568755 1568757 . + 0 transcript_id "g376.t1"; gene_id "g376"; # protein sequence = [MPVAAREASIYTGITLSEYFRDQGTNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGTKLASFYERAGKVVCL # GNPQRQGTVSIVGA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g376 ### # start gene g377 Scaffold_6 AUGUSTUS gene 1576398 1577762 0.93 - . g377 Scaffold_6 AUGUSTUS transcript 1576398 1577762 0.93 - . g377.t1 Scaffold_6 AUGUSTUS stop_codon 1576398 1576400 . - 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_6 AUGUSTUS CDS 1576398 1577762 0.93 - 0 transcript_id "g377.t1"; gene_id "g377"; Scaffold_6 AUGUSTUS start_codon 1577760 1577762 . - 0 transcript_id "g377.t1"; gene_id "g377"; # protein sequence = [MSLLPQIFWCTCATLTTTVEQEFAEALKLLESLLKIVDFDDPFIIEQLLARRPLEWTGSASLQPNLLNGLRSSVTTAR # TLRILQSLSEFKDAKIIDSSNGRVRDLYTLSLPWCLHSMIAEKTGGDKSTDDALRRFAENIGDLAKQEGRVSIHKIMTSFAKGHFRTKDDFLRQSVAS # LREHYGVEHWTEIVTLLMGLVLNRERWLRIQSMQILKVLFQQRETRNPVELLGSELLMPLLRLLETDLASQALDVLEEPMAMSGGLAAKHVLRMSMHS # RTLPNSQEVDSVATVFGVPEESGWSVVKADELRDACRSNLMEVFDTCSMPTRPSRIEFEPEEIEVLAEPSRVEDLGGLVQNLHDLTTFFQDDIKPTSM # NGAVPNRRLEARVAAILAKSTAHEETVMDIPSTPFVDVFRVAGMSSDEDSDQSSVNSDEELDAFYFDSPTVYRSAPNGSHFP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g377 ### # start gene g378 Scaffold_6 AUGUSTUS gene 1583068 1584076 0.43 - . g378 Scaffold_6 AUGUSTUS transcript 1583068 1584076 0.43 - . g378.t1 Scaffold_6 AUGUSTUS stop_codon 1583068 1583070 . - 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_6 AUGUSTUS CDS 1583068 1583993 0.93 - 2 transcript_id "g378.t1"; gene_id "g378"; Scaffold_6 AUGUSTUS CDS 1584046 1584076 0.43 - 0 transcript_id "g378.t1"; gene_id "g378"; Scaffold_6 AUGUSTUS start_codon 1584074 1584076 . - 0 transcript_id "g378.t1"; gene_id "g378"; # protein sequence = [MSEGIQITIPDFDDEDYGSSTIPFGRSAGNAFGANSSGFGSAGGFGGTSSAPDSPTSITPLASALDGTERSFFSSHNR # GDSITSIESAGSGSTRFPNYPRSATSFSTFTHSAQPSVIASSAGFNKKSSFASFRNAFKSGKSNELPPVPQLDNYVFKNPFNRSTSSLNSSSIGVTAK # GTITTSTPFGRPPTPGSVDTRYGRAKKSHAQAKSFHSQSGSIFHASDGGSEGHGISSSPPPVPRACRISAVKLRTLKTIRSSWTQKPSDYALHAVFIR # FASSAESKIDAFLRQPLEQDPLLPELIGPDVDPKLDETLLSLGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g378 ### # start gene g379 Scaffold_6 AUGUSTUS gene 1598018 1598389 0.77 + . g379 Scaffold_6 AUGUSTUS transcript 1598018 1598389 0.77 + . g379.t1 Scaffold_6 AUGUSTUS start_codon 1598018 1598020 . + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_6 AUGUSTUS CDS 1598018 1598389 0.77 + 0 transcript_id "g379.t1"; gene_id "g379"; Scaffold_6 AUGUSTUS stop_codon 1598387 1598389 . + 0 transcript_id "g379.t1"; gene_id "g379"; # protein sequence = [MHDLTLSFQAQNNTHIAVATPYDRNTALTNIITCEQWVVGSQGYIDVEYTLGGQAVILHPSTILAENKSPVCAGLVQT # SQGMDDESATLSNAAFSVVRSNFLWALDSVVTVTSLSMVLCWWWS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g379 ### # start gene g380 Scaffold_6 AUGUSTUS gene 1605042 1607148 0.87 + . g380 Scaffold_6 AUGUSTUS transcript 1605042 1607148 0.87 + . g380.t1 Scaffold_6 AUGUSTUS start_codon 1605042 1605044 . + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_6 AUGUSTUS CDS 1605042 1606101 0.89 + 0 transcript_id "g380.t1"; gene_id "g380"; Scaffold_6 AUGUSTUS CDS 1606934 1607148 0.89 + 2 transcript_id "g380.t1"; gene_id "g380"; Scaffold_6 AUGUSTUS stop_codon 1607146 1607148 . + 0 transcript_id "g380.t1"; gene_id "g380"; # protein sequence = [MLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDGSDPRKLKTFFVNLALVFNDRPKYFTDQRKVNYTLS # YLSGSAKEWFVPDILDPDLDSLPAWTSSFKALVKELQDNFGVYDAQGEAEDSLGNLKMKETENIRKYNIRFNTLAASTNWDSAALKWAYGRGLAERIK # DEMARLPEPATLADYRQEVLRIDNRYWKREETRKREAGKPFVARNPKKGSSDFKTGSTNQQNNSQPSGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSG # QSGGQRPAFNHLGADGKYFPPKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATIEVVEEDRKTIRSSXVAARAADRSSTTPTVPPL # HPSIPEEYEFADVFDEIAADSLPEHRPYDLKIDLEEALRRLSAVFILCLKRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g380 ### # start gene g381 Scaffold_6 AUGUSTUS gene 1608931 1609545 0.99 + . g381 Scaffold_6 AUGUSTUS transcript 1608931 1609545 0.99 + . g381.t1 Scaffold_6 AUGUSTUS start_codon 1608931 1608933 . + 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_6 AUGUSTUS CDS 1608931 1609545 0.99 + 0 transcript_id "g381.t1"; gene_id "g381"; Scaffold_6 AUGUSTUS stop_codon 1609543 1609545 . + 0 transcript_id "g381.t1"; gene_id "g381"; # protein sequence = [MVTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGY # HPEADGQTESVSIRLSNSTSGSIVPTNKMTGPPLLPIAEFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILL # AQSRYKEQADRKRISHPEFPIGSEVCSC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g381 ### # start gene g382 Scaffold_6 AUGUSTUS gene 1622576 1623256 0.67 - . g382 Scaffold_6 AUGUSTUS transcript 1622576 1623256 0.67 - . g382.t1 Scaffold_6 AUGUSTUS stop_codon 1622576 1622578 . - 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_6 AUGUSTUS CDS 1622576 1623256 0.67 - 0 transcript_id "g382.t1"; gene_id "g382"; Scaffold_6 AUGUSTUS start_codon 1623254 1623256 . - 0 transcript_id "g382.t1"; gene_id "g382"; # protein sequence = [MIAYKQQQEREKKRERERNERAREKQREERAMATGGRPTTACIERSSLPLSLQSKQFTNYFALPKYLYERRALSRYAN # TPQRTIFFCSQLRRGQHDPRSSHLAQSSDQSPSRPEKLLNEARSFDEEPSQPYYTVLGSSKRVVAAEGVKIEDTFSPDFSLSTSNLVEGISSSMGVGL # GLGQPSSSPQSEIPRPSTQTWERSASVTVGKPSKTSSAFGIGIGKTLSRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g382 ### # start gene g383 Scaffold_6 AUGUSTUS gene 1628186 1628857 0.62 + . g383 Scaffold_6 AUGUSTUS transcript 1628186 1628857 0.62 + . g383.t1 Scaffold_6 AUGUSTUS start_codon 1628186 1628188 . + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_6 AUGUSTUS CDS 1628186 1628857 0.62 + 0 transcript_id "g383.t1"; gene_id "g383"; Scaffold_6 AUGUSTUS stop_codon 1628855 1628857 . + 0 transcript_id "g383.t1"; gene_id "g383"; # protein sequence = [MSDSKRKEIDAFFNFFAAFDLTIPVATLADLSDGQALFEVLAVVCVFLNNIFRATCFQYTLLLITLHRDPDYFRPTTR # FSAQDSANWVLHFSSLKRLYRLMTQYFSDVLQKPTSGLDVPDLQAMAKNADDTATLVMCRLTIAIGVQCEKNKEFIDKIQGLSQVDQHYLMKVIEQVR # RSQSRSECGLTGTQVMSRISTSNSSDIGEASMTEYIVILTGIHTISE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g383 ### # start gene g384 Scaffold_6 AUGUSTUS gene 1629615 1630226 0.93 + . g384 Scaffold_6 AUGUSTUS transcript 1629615 1630226 0.93 + . g384.t1 Scaffold_6 AUGUSTUS start_codon 1629615 1629617 . + 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_6 AUGUSTUS CDS 1629615 1630226 0.93 + 0 transcript_id "g384.t1"; gene_id "g384"; Scaffold_6 AUGUSTUS stop_codon 1630224 1630226 . + 0 transcript_id "g384.t1"; gene_id "g384"; # protein sequence = [MESYKGQIVDLENKASTRTQELETLKFELEQALTKLKIVSEERVKESETIELYQERVRELELASDTRLPKAPRTRQDS # VETTDASGEPLSSAVEDVDDEEDAQAMGLGGELHDAESGTTMTDLKLQIRKLKRELEAVRKNEADASRVLVLENLLDDANRMKSRYEADYLAAHREKL # VLQRDLEEIRSGKSMGDGYVLRLNGFR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g384 ### # start gene g385 Scaffold_6 AUGUSTUS gene 1632613 1633350 0.97 + . g385 Scaffold_6 AUGUSTUS transcript 1632613 1633350 0.97 + . g385.t1 Scaffold_6 AUGUSTUS start_codon 1632613 1632615 . + 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_6 AUGUSTUS CDS 1632613 1633350 0.97 + 0 transcript_id "g385.t1"; gene_id "g385"; Scaffold_6 AUGUSTUS stop_codon 1633348 1633350 . + 0 transcript_id "g385.t1"; gene_id "g385"; # protein sequence = [MQLGPDITGDADVVRALLARFGVTDAASPQDEQVIDIMSNLSRKATEGAVLCDVAALVRALNSFPNANINWAAIIKSF # DVPDRHGVDTPTLKLLIAILLNCSRDTNPHAVTGFWSIWSNALYQLRLLDALLSLPGDTFNFVHLPGRRIVTVEDVAVASPTIKSLAANVQGHTWNSL # DLFEVLVKLADSESTEIRNFVREMLDKAIKISAELVHMGLLQVPVSKWKLTRPLDILYLMCVFPGCPLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g385 ### # start gene g386 Scaffold_6 AUGUSTUS gene 1633432 1635618 0.38 + . g386 Scaffold_6 AUGUSTUS transcript 1633432 1635618 0.38 + . g386.t1 Scaffold_6 AUGUSTUS start_codon 1633432 1633434 . + 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_6 AUGUSTUS CDS 1633432 1633534 0.51 + 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_6 AUGUSTUS CDS 1633653 1633863 0.51 + 2 transcript_id "g386.t1"; gene_id "g386"; Scaffold_6 AUGUSTUS CDS 1633924 1634170 0.87 + 1 transcript_id "g386.t1"; gene_id "g386"; Scaffold_6 AUGUSTUS CDS 1634299 1635618 0.78 + 0 transcript_id "g386.t1"; gene_id "g386"; Scaffold_6 AUGUSTUS stop_codon 1635616 1635618 . + 0 transcript_id "g386.t1"; gene_id "g386"; # protein sequence = [MANTTDVFDGCLSRLLSREPPQYYPHPRRGAGSQTSRREYLNLDKWLMDNVSNHGAEFLHSVLMFLEEKMQSEKTIRL # ADPQPESRTMPLNPNTITIILRMLRNSQSQMADDDKHFWLEVKNHCLQVHPRLMSMMPNSEIEPGYSVINYSTETETEVDGIYKQMYDENTTIDEVID # MLRRYKIPITPLIDYIPLGIAIRYIVDALNCPPETNLFKFGIQALTRFESRLHEWRPLCETLVQNSNLAEAKPDLVSTLQKDLAATADGITGDVQVPS # VEITPVFSAIQPDVIHEVVTLPAEEIHDKILFIINNLAPSNFNTKLEEMQGLFKDEYSRWFANYLVDQRISTEPNNHSLYLRFLDSLNREKLSKFILH # ESFVKSASMLNSERALQFGTERTNLKNVAIWLGLITLARDIPIKHKNISFKDLLIEGYESGRSIISIPFVCKVLEGCAHSKVFKPPNPWLMGVMSLLA # EIYFFADVKLKYKFEIEVLCTLLDINLDAIEPSTILRTRPESLVGPLLPEYVTDIDSLPIGLYDPTGTGANSVGLGAEGGLVGAGDGQNMLSLGSSSP # SDPSRALDPHIESILSTLANIAHVNSQLSPLNTQSAFKRAVALAVERAVREVSVLQWQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g386 ### # start gene g387 Scaffold_6 AUGUSTUS gene 1636366 1637756 0.63 + . g387 Scaffold_6 AUGUSTUS transcript 1636366 1637756 0.63 + . g387.t1 Scaffold_6 AUGUSTUS start_codon 1636366 1636368 . + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_6 AUGUSTUS CDS 1636366 1636772 0.83 + 0 transcript_id "g387.t1"; gene_id "g387"; Scaffold_6 AUGUSTUS CDS 1637117 1637756 0.99 + 1 transcript_id "g387.t1"; gene_id "g387"; Scaffold_6 AUGUSTUS stop_codon 1637754 1637756 . + 0 transcript_id "g387.t1"; gene_id "g387"; # protein sequence = [MSFSSPAVYPLTPAADSVLGSVPSHQDAMDRFNVMTRDLEALFAQLPVNSLAVLPPNHDVRYLIRNILNAANLGERQR # TPLQMSQKIVQLLYKTSSSLGREVYVALLQQLCNAFEDVAKEAITWLLYAEDEVSRRLVSKLLDDLRGVRRPPMAALPDSRQPSTKPGIENMREKLLG # WFQQWINIYQRSHSPEKNFVPFITQLTKAGIVKEDDTSSLFFRVCAEASVNSYLKSVAAGEYDYAFQALDAMSRLIVYMIKYHGDPSGGNVDQAKVHY # LSKILSIFVLVVANFHEEQGVAFQQKPFFRFFSSLINDLHSMEVHLGTAYFQLLFCIRYVFTIGKLVLDLNFTQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g387 ### # start gene g388 Scaffold_6 AUGUSTUS gene 1640403 1640810 0.75 + . g388 Scaffold_6 AUGUSTUS transcript 1640403 1640810 0.75 + . g388.t1 Scaffold_6 AUGUSTUS start_codon 1640403 1640405 . + 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_6 AUGUSTUS CDS 1640403 1640810 0.75 + 0 transcript_id "g388.t1"; gene_id "g388"; Scaffold_6 AUGUSTUS stop_codon 1640808 1640810 . + 0 transcript_id "g388.t1"; gene_id "g388"; # protein sequence = [MAAENNTVVNSISSAADRQYSHVILSTKCVPEVIKTPDLLKPLISSPYCDQFQQPVYVLLQNGLNIEVDLYRAIKALG # KPEEPVIINTGVYVFANLISANVVEHGPFVSANSWRELLMIFDTYPGTQGKVRYRYL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g388 ### # start gene g389 Scaffold_6 AUGUSTUS gene 1640996 1641562 0.84 + . g389 Scaffold_6 AUGUSTUS transcript 1640996 1641562 0.84 + . g389.t1 Scaffold_6 AUGUSTUS start_codon 1640996 1640998 . + 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_6 AUGUSTUS CDS 1640996 1641562 0.84 + 0 transcript_id "g389.t1"; gene_id "g389"; Scaffold_6 AUGUSTUS stop_codon 1641560 1641562 . + 0 transcript_id "g389.t1"; gene_id "g389"; # protein sequence = [MLNIAYAACACLTRCAISPLLYSVGGSLFVRCSLTSLFRPPPTNVPYEPYLDPVTADRVNLYTRKWIKDILDECVRLG # VSYLSTYTFHRAHATIGRAMGFPDSEDGLPSSIVENSMKTSEKNYSGPDSNHNPSTLLDIEKGAPIEVEVIWGETVRLAKERNVDVPVSVYASCSAFL # QLFLYTPQYQAH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g389 ### # start gene g390 Scaffold_6 AUGUSTUS gene 1641974 1642776 0.53 - . g390 Scaffold_6 AUGUSTUS transcript 1641974 1642776 0.53 - . g390.t1 Scaffold_6 AUGUSTUS stop_codon 1641974 1641976 . - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_6 AUGUSTUS CDS 1641974 1642405 0.97 - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_6 AUGUSTUS CDS 1642507 1642776 0.54 - 0 transcript_id "g390.t1"; gene_id "g390"; Scaffold_6 AUGUSTUS start_codon 1642774 1642776 . - 0 transcript_id "g390.t1"; gene_id "g390"; # protein sequence = [MQGWHIEKLSIPGRLGRVSVHVIEQSSSSAMLVNAKTTNILEFSVDPKLFGVFEKDMQLYIDGKQVVLDSRILEMAQV # IYFKAVGPKLWKTVLSSPNSVDHSEFMGPAPLVFVVPDAVLDLESGPTETPSHAMSIALRLSHDLLVYHRLDSEIMINSEVNIALLKPEFASAFSKGN # VIVVGNEAALELQTALHQGKTNFVTENNFIDVKEFMTRVHVDGFSPNGPELQPGQGM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g390 ### # start gene g391 Scaffold_6 AUGUSTUS gene 1646148 1646498 0.73 + . g391 Scaffold_6 AUGUSTUS transcript 1646148 1646498 0.73 + . g391.t1 Scaffold_6 AUGUSTUS start_codon 1646148 1646150 . + 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_6 AUGUSTUS CDS 1646148 1646498 0.73 + 0 transcript_id "g391.t1"; gene_id "g391"; Scaffold_6 AUGUSTUS stop_codon 1646496 1646498 . + 0 transcript_id "g391.t1"; gene_id "g391"; # protein sequence = [MHSDSRLGQSQQTISIPASTIQLPMLGPLQGLPPNNQSQQSQQQQQQQQQQQQQQPGQNNIPPPPPLNGQDYTLSSVL # HFLQTEWRRYERDRNEWEIERAEMRVFLFFSTLTPQSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g391 ### # start gene g392 Scaffold_6 AUGUSTUS gene 1647157 1648611 0.53 + . g392 Scaffold_6 AUGUSTUS transcript 1647157 1648611 0.53 + . g392.t1 Scaffold_6 AUGUSTUS start_codon 1647157 1647159 . + 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_6 AUGUSTUS CDS 1647157 1647791 0.57 + 0 transcript_id "g392.t1"; gene_id "g392"; Scaffold_6 AUGUSTUS CDS 1648065 1648611 0.64 + 1 transcript_id "g392.t1"; gene_id "g392"; Scaffold_6 AUGUSTUS stop_codon 1648609 1648611 . + 0 transcript_id "g392.t1"; gene_id "g392"; # protein sequence = [MNPLPNRPLINHSTVPLSLPNVPSFEQMAYNGRPRKVLPEAGSSLLNGINLISGPSSAPATGPLERSNPLASGMMQQH # IQLQQVQQQQQAQQQQQQPPSTQQQSNGNQSQPILPGTSQLDNKGSESEPRQLTMIFRPDDSGEWKDKLRQAHEASEQLRLSRESQAAGGSWEGRREF # EDELKEDEGEVDDDDSSVVSEGDGSKVWKARRTLRNSRVTTEIEPQITLRGHSAAITRLIHAPSKRLLYSASLDSSIRVWALPSPSHTTYAPYDDSTF # RGHLVGHTDAVWDLALARDESTLISCGAEGAVKVWDVGGPSPGALKLTWGWLGVDGISDAPTDDNRDAPGATSIEAIKSDLKKVAVAYQNAVVKIFDI # ETGKELSRLGSDMSYGTLIHL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g392 ### # start gene g393 Scaffold_6 AUGUSTUS gene 1651879 1653172 0.37 - . g393 Scaffold_6 AUGUSTUS transcript 1651879 1653172 0.37 - . g393.t1 Scaffold_6 AUGUSTUS stop_codon 1651879 1651881 . - 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_6 AUGUSTUS CDS 1651879 1652316 0.75 - 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_6 AUGUSTUS CDS 1652387 1652718 0.57 - 2 transcript_id "g393.t1"; gene_id "g393"; Scaffold_6 AUGUSTUS CDS 1652800 1653172 0.9 - 0 transcript_id "g393.t1"; gene_id "g393"; Scaffold_6 AUGUSTUS start_codon 1653170 1653172 . - 0 transcript_id "g393.t1"; gene_id "g393"; # protein sequence = [MYNKFTQSKHAVLFATDIAARGLDFPSVDWVLQLDAPEDADTYIHRVGRTARYESRGKGLLFLMPSEEEGMLAALKAK # GIEVQKIKVKPSKQQDIQNQLQKLAFQEPEIKYLGQRVKISFLRVPFAELPANEFAESLGLPGAPKIKFLSKEVAKQKKNTDRRVNAAKQQALEEKQN # SADENEEESDDGDIHPSSDEEDGSGNESEAAVTEEPPSKSTKVRSANSLGFFVELITPNHYSKLIDQDVASDEDDFITLRRADHDLVDVPLREVALEN # LSKRKNKLGKAKRTILLNAPITKKIVFDDSGVGREAGEVADAEDWVKETGGVEGVVKEGNKYAEAERGKMKIADVQDKHDAREKKKEKKRKRKEREKI # AVRSHFDF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g393 ### # start gene g394 Scaffold_6 AUGUSTUS gene 1654961 1656132 0.74 + . g394 Scaffold_6 AUGUSTUS transcript 1654961 1656132 0.74 + . g394.t1 Scaffold_6 AUGUSTUS start_codon 1654961 1654963 . + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_6 AUGUSTUS CDS 1654961 1655899 0.76 + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_6 AUGUSTUS CDS 1655953 1656132 0.75 + 0 transcript_id "g394.t1"; gene_id "g394"; Scaffold_6 AUGUSTUS stop_codon 1656130 1656132 . + 0 transcript_id "g394.t1"; gene_id "g394"; # protein sequence = [MTTTPPDEIIDVEATNSPDSSSVAQFSGTVSSSSIISTPVDPIVSPSYYAHPPQLPPLLVPSPSAPSISLKDSISPSL # HYNIVPSMASFMHTANSDPINSSISVTAADPEPLLASTTPQPPAKPPASSLPERLQSDESISAVAKPRKKKRKKLNLSEMLDLDQADQVESPTGPISI # VSSEGHDLKVEAMALDPAVKSSEPDFPTPDMQGSSTVGIKRARSNSSSRMPGSHSPNFLDRVLKWESPIDRTEHEHRPLSIEPHESAAAHITSALVED # KDKDSPDAEDAMEVDIEPAQDNGPEDEIMMDVINNNLQTVEASLTTSDKLESVKAVEVLPPTPDEANDASSTTMALTDAPQPIIIKTPHKVSLPEFCV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g394 ### # start gene g395 Scaffold_6 AUGUSTUS gene 1657501 1658490 0.36 - . g395 Scaffold_6 AUGUSTUS transcript 1657501 1658490 0.36 - . g395.t1 Scaffold_6 AUGUSTUS stop_codon 1657501 1657503 . - 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_6 AUGUSTUS CDS 1657501 1657980 0.92 - 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_6 AUGUSTUS CDS 1658038 1658490 0.39 - 0 transcript_id "g395.t1"; gene_id "g395"; Scaffold_6 AUGUSTUS start_codon 1658488 1658490 . - 0 transcript_id "g395.t1"; gene_id "g395"; # protein sequence = [MQLEKEQITPGYEDYGNVLSSTTFSPQRSFSSGSYQQQQSQYSPPHISTMPSPYSLASAPAAPQSFPPAPLSDKGSAN # ELDLNDPSTLEIYSRILLFKDDRMRDELAFSRMLLPKQRRVVHLIAQKLGVYHYSVGEGDERYAVVTRIDPQRAQRAPTLSRAPSAYLTPTGSTISAA # PGSLRMKKSMPDLKTLHSQAPRLTTRASNGNIREGYATIASPSRRSSGFGSLFANGGAFGNSGVPPVPNLPTGLQSAGTMNSASGNGHESPGGVVRQP # RGPGVGGFARRDSRVGISEGQPRGVLDARTYEPLEI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g395 ### # start gene g396 Scaffold_6 AUGUSTUS gene 1658769 1659278 0.36 - . g396 Scaffold_6 AUGUSTUS transcript 1658769 1659278 0.36 - . g396.t1 Scaffold_6 AUGUSTUS stop_codon 1658769 1658771 . - 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_6 AUGUSTUS CDS 1658769 1659278 0.36 - 0 transcript_id "g396.t1"; gene_id "g396"; Scaffold_6 AUGUSTUS start_codon 1659276 1659278 . - 0 transcript_id "g396.t1"; gene_id "g396"; # protein sequence = [MTSSPPDISSLSLTSQQQRLHDSYDYEGSSGNRPQYHFATSPGISIQSQYNPLTTGQSPLKKPVRGGLPSVRCCPFFS # PYNPPIFTIVAQQWLDNSSDSRSLSPHNNSDFSSAGGSPPMSHLSPPPIAPTTPSQNPDDEIIPTAIVIKNIPFNVKRETLLDIIVSSSHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g396 ### # start gene g397 Scaffold_6 AUGUSTUS gene 1662854 1663482 0.2 + . g397 Scaffold_6 AUGUSTUS transcript 1662854 1663482 0.2 + . g397.t1 Scaffold_6 AUGUSTUS start_codon 1662854 1662856 . + 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_6 AUGUSTUS CDS 1662854 1663096 0.23 + 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_6 AUGUSTUS CDS 1663204 1663482 0.56 + 0 transcript_id "g397.t1"; gene_id "g397"; Scaffold_6 AUGUSTUS stop_codon 1663480 1663482 . + 0 transcript_id "g397.t1"; gene_id "g397"; # protein sequence = [MTSYFRYGSVSSLFTYSLLECPNISKNHRNVADTQDRGALDSTDFAIGMYLIQGVTSGQISIIPTSLPQDCTSKPLAA # LLRMLQSQGTGGAVSKKPLVSPTIPARKTTNPSAIGNSAFGAQARWDVTAAEKASSDGYFDTLDTTKAGYIEDEVAVPFMLESKLPGDACSDLVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g397 ### # start gene g398 Scaffold_6 AUGUSTUS gene 1664335 1666607 0.43 + . g398 Scaffold_6 AUGUSTUS transcript 1664335 1666607 0.43 + . g398.t1 Scaffold_6 AUGUSTUS start_codon 1664335 1664337 . + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_6 AUGUSTUS CDS 1664335 1665210 0.43 + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_6 AUGUSTUS CDS 1665291 1666607 0.93 + 0 transcript_id "g398.t1"; gene_id "g398"; Scaffold_6 AUGUSTUS stop_codon 1666605 1666607 . + 0 transcript_id "g398.t1"; gene_id "g398"; # protein sequence = [MRVEKAEIEGSFLRDKEEVRDLNRRAFEAGHQIETLKAEIEKAKKEAKQQKGLLAIAKKQLSSKEAERVKVEKELAEA # QAATVAATQEKEEVDAALEKVTSLIPATAPTVAEPVVAGFPHAERTTSEDSLSFAAAHALPSTPEIGSPSSGKSNNPFERLAKSDPSTPRSQSPFLPF # NNATVPSPSVLNGNANQTAEASLDDPFGFAQAFETPDKAPEPVVGEAIAPTPAEDNVGTPKPTIVSLDDHEESPATPTTAHTEEFATPPSTADGILKP # MRKSTEDIISSKFPDLDDRAFISHPETDLGASLNEIEPEDSDSSDDEDEVPLATLKAKTDSLETEPKSAIVSATNGQSVTASFDDIFSAPSSNGQAVP # TETKDAFGIPIETQSNSPFGSTSDSHVASSAEAGVNAFDEAMGKIAPTTSNNTAQFSFENAFDDTFDFGSAKGADTSSSFPPAPANGASPAKVKESDG # FESLFVTPPSNGVTASVARPVSSFLPNVVASSPPPSTPSSAQDPPVAAGPSFDEVFAGFDSSPSIQLGTPNTAASAPAPIPAPSPIPVATTKTPGSPT # QKPFPATNTSPSQSSVTRSISPPPHRRSPPLRTGSPKPRPSTASSSKEGHEKEKNPPPPRHSKLSVSFNTAYMIIYLTIISQIRLPFGKKKKQEAVPP # PPPSQFLTPPTEEPEQIGTPAVGDDVEAVKQLTAMGFSRSQAVGALEKYAYDVPRALNSLLGQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g398 ### # start gene g399 Scaffold_6 AUGUSTUS gene 1668724 1669233 1 - . g399 Scaffold_6 AUGUSTUS transcript 1668724 1669233 1 - . g399.t1 Scaffold_6 AUGUSTUS stop_codon 1668724 1668726 . - 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_6 AUGUSTUS CDS 1668724 1669233 1 - 0 transcript_id "g399.t1"; gene_id "g399"; Scaffold_6 AUGUSTUS start_codon 1669231 1669233 . - 0 transcript_id "g399.t1"; gene_id "g399"; # protein sequence = [MLLLSAFVSVALGSQIGFALVPGKASSFAGSTSTFQFPPADVTATASLINSFFPDASEVGFAGPTPSTYFLIRITEIS # QAQHLFTQAGDEAESIATAPALSPVKGYFPLVRPETSDKKGKAFDVVDSWANLSPMQSVKSFGLDNATERIPEGCKINQVFSPPSWCKVPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g399 ### # start gene g400 Scaffold_6 AUGUSTUS gene 1673135 1673671 0.92 - . g400 Scaffold_6 AUGUSTUS transcript 1673135 1673671 0.92 - . g400.t1 Scaffold_6 AUGUSTUS stop_codon 1673135 1673137 . - 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_6 AUGUSTUS CDS 1673135 1673671 0.92 - 0 transcript_id "g400.t1"; gene_id "g400"; Scaffold_6 AUGUSTUS start_codon 1673669 1673671 . - 0 transcript_id "g400.t1"; gene_id "g400"; # protein sequence = [MCKFSKAPECFDSEFYFLQSCRFYYPPGTTGNELGASDPVFMGKYGDELKNDSGKWIDSSVWHGKAHTWEKMPWLIKQ # VGNIRRLDCIIPIISAFFRVSQWKRISGGRPFVIKGIQSAEDALKAYEIGCEGIVVTNHAGRQVDGAVGSLEVLPEIVDAVGDSKDILVSLKYPFPLT # VS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g400 ### # start gene g401 Scaffold_6 AUGUSTUS gene 1677149 1678124 0.83 + . g401 Scaffold_6 AUGUSTUS transcript 1677149 1678124 0.83 + . g401.t1 Scaffold_6 AUGUSTUS start_codon 1677149 1677151 . + 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_6 AUGUSTUS CDS 1677149 1677175 0.98 + 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_6 AUGUSTUS CDS 1677272 1677290 0.99 + 0 transcript_id "g401.t1"; gene_id "g401"; Scaffold_6 AUGUSTUS CDS 1677388 1678124 0.84 + 2 transcript_id "g401.t1"; gene_id "g401"; Scaffold_6 AUGUSTUS stop_codon 1678122 1678124 . + 0 transcript_id "g401.t1"; gene_id "g401"; # protein sequence = [MEIKEDGGKTTFAGPSFSSGRRTLATVRETSTTYIPSSQVPISHQTHQKPIPKPKLLTSIILNRAPILTPTPTPFERA # YYAYQARLRRALSNPFPYDFYFKQGSILETRFTLEERKRERIAFGREFGIADDLDKEKAAANRAAVEQLAEQEGESEEMMARVHPSDEARDYKSLDRK # GKRNLYLLLQENEGTWRFPEGNVKKGELLHQAAQRDLLAECGEYMDTWIVSRNPIGHYRPPRKAPLAGKPQPEVRAHFESDTLN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g401 ### # start gene g402 Scaffold_6 AUGUSTUS gene 1685836 1687236 0.8 - . g402 Scaffold_6 AUGUSTUS transcript 1685836 1687236 0.8 - . g402.t1 Scaffold_6 AUGUSTUS stop_codon 1685836 1685838 . - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_6 AUGUSTUS CDS 1685836 1687236 0.8 - 0 transcript_id "g402.t1"; gene_id "g402"; Scaffold_6 AUGUSTUS start_codon 1687234 1687236 . - 0 transcript_id "g402.t1"; gene_id "g402"; # protein sequence = [MVPSERDKVFLEVHIQNLTPESIWFERMHFEAAESWDARDANLINVNGEQRSLYMGSTALMQPQDMRQYIYILSPKSI # HLEPVVYSPGAVIPLGRLDISWRSSYGEPGRLLTSMLTRRIPLVPQPVQPQPASALPPYLKRQSTSATPPTRPRSPQLVQSRPSSPTPRSNSPVPYRA # RASSVISGFSQIPLSPQPPASVIPTTTIEAHLLVRDVAHGTIAVGKNFKVALSLVLSSLLVSDRQRQKLQLSLVIQHIGFPPTSGFAGLSVPKPAQLP # PPDSSSLSPRSLSSLGFSSPSPTYTTFNYPLAHQKLLEASQVQSATRESSIDGPLKPSENMKSLPPPYFEKVDESKRLKMTMVTFSGPSAIVLPPIEL # VPSSKSYTVESSDSQPGGLRPTSKHLATLDFELDYVALRRGFAMVGGLRLLLVGEKFVDDDADKEDDDGQSLVPKILEIRSLKEWNVVAEVLVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g402 ### # start gene g403 Scaffold_6 AUGUSTUS gene 1694957 1695361 0.44 - . g403 Scaffold_6 AUGUSTUS transcript 1694957 1695361 0.44 - . g403.t1 Scaffold_6 AUGUSTUS stop_codon 1694957 1694959 . - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_6 AUGUSTUS CDS 1694957 1695361 0.44 - 0 transcript_id "g403.t1"; gene_id "g403"; Scaffold_6 AUGUSTUS start_codon 1695359 1695361 . - 0 transcript_id "g403.t1"; gene_id "g403"; # protein sequence = [MIAELGKLQSQATSLSASLQASASKTLKDPTAQLPPQVQQRYAELSSVLQAQASSASATYAELSNHLASTVSELRSIM # TAENVSIQEKATKVTHEVSVRVQPLLEVLSRNAQQAISARGESQSPTVNGVNGHAN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g403 ### # start gene g404 Scaffold_6 AUGUSTUS gene 1695778 1696260 0.33 - . g404 Scaffold_6 AUGUSTUS transcript 1695778 1696260 0.33 - . g404.t1 Scaffold_6 AUGUSTUS stop_codon 1695778 1695780 . - 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_6 AUGUSTUS CDS 1695778 1696260 0.33 - 0 transcript_id "g404.t1"; gene_id "g404"; Scaffold_6 AUGUSTUS start_codon 1696258 1696260 . - 0 transcript_id "g404.t1"; gene_id "g404"; # protein sequence = [MKVSLNKCGETDNIFLSTTMSSTETETSSIPMPSSSPSTHPPELTVISRISSIPLISSSLEIVNDTLSTNTYTRSPYS # TALGLSNSAYKLTEPLQTHLAPLIVRADSYANLAVDVVQKRYPSAFTTTPEDVMGYVQNRQKDVGEYVRERRESAGVIAHDI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g404 ### # start gene g405 Scaffold_6 AUGUSTUS gene 1698624 1699031 0.71 - . g405 Scaffold_6 AUGUSTUS transcript 1698624 1699031 0.71 - . g405.t1 Scaffold_6 AUGUSTUS stop_codon 1698624 1698626 . - 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_6 AUGUSTUS CDS 1698624 1699031 0.71 - 0 transcript_id "g405.t1"; gene_id "g405"; Scaffold_6 AUGUSTUS start_codon 1699029 1699031 . - 0 transcript_id "g405.t1"; gene_id "g405"; # protein sequence = [MYCVLEKTLNDLVVGDVLYKYMGAYNKGIYLLLEDYEVKGVKHGKDTLIIKVIGGLRNPKSVVDNKVWGEVKALKDVG # LYVDSGMANVDNGKYPVIVMKLVKGVMIKDTTEYENARLDLRLKWLEEAKPLVEEES] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g405 ### # start gene g406 Scaffold_6 AUGUSTUS gene 1704298 1704711 0.6 - . g406 Scaffold_6 AUGUSTUS transcript 1704298 1704711 0.6 - . g406.t1 Scaffold_6 AUGUSTUS stop_codon 1704298 1704300 . - 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_6 AUGUSTUS CDS 1704298 1704711 0.6 - 0 transcript_id "g406.t1"; gene_id "g406"; Scaffold_6 AUGUSTUS start_codon 1704709 1704711 . - 0 transcript_id "g406.t1"; gene_id "g406"; # protein sequence = [MVYEDAEKLYAEVAKDGKSLIEEAFQVLFSHSVLLSPETRLQPNTSLNQIIGYNTTFLDRREIVKIPLDGASAGLKTA # VAQVDNNNNEVGYAIMDNGVLDASIANGLDLHASGESTVHSLMLMISLVHPSQSIHQRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g406 ### # start gene g407 Scaffold_6 AUGUSTUS gene 1710274 1711008 0.53 - . g407 Scaffold_6 AUGUSTUS transcript 1710274 1711008 0.53 - . g407.t1 Scaffold_6 AUGUSTUS stop_codon 1710274 1710276 . - 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_6 AUGUSTUS CDS 1710274 1711008 0.53 - 0 transcript_id "g407.t1"; gene_id "g407"; Scaffold_6 AUGUSTUS start_codon 1711006 1711008 . - 0 transcript_id "g407.t1"; gene_id "g407"; # protein sequence = [MFKRLDSLIGIWALEFFEKNRTKGVTLDIECIDISSAQFPSTHPSEVHFSVNSVVNLPNPDWTDTFSFAHQRLLVAAM # NDTLWRSAVAELFRVVKPGGWVELVEIEAQDFSTWSVGPNSTKLASLINALYGGKGVIGDLSVYLPVILKEAGFVNVQCDPRRVTIGGEVDATPHKIT # EVKGYGSDMWRDLWMGMKGPVIEAGGYGAVDTVEEYEALVQGTEVELKNSKEAYTTFFAILARKPENT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g407 ### # start gene g408 Scaffold_6 AUGUSTUS gene 1715982 1716434 0.63 - . g408 Scaffold_6 AUGUSTUS transcript 1715982 1716434 0.63 - . g408.t1 Scaffold_6 AUGUSTUS stop_codon 1715982 1715984 . - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_6 AUGUSTUS CDS 1715982 1716434 0.63 - 0 transcript_id "g408.t1"; gene_id "g408"; Scaffold_6 AUGUSTUS start_codon 1716432 1716434 . - 0 transcript_id "g408.t1"; gene_id "g408"; # protein sequence = [MFYFHISPQIFITPLFFSSVAGHGEHPQSRDAAAIMVHSGAYYNMFLNSIEKAPFTTFEIESNAVMDGSEDVGTLEIK # EHATSMSANDVSPSVPSTSTSAAATLTPSDPVTPTTSGITDDSAMSPVITPTLVPAKKASGFMKPGKSTSVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g408 ### # start gene g409 Scaffold_6 AUGUSTUS gene 1718103 1718465 0.98 + . g409 Scaffold_6 AUGUSTUS transcript 1718103 1718465 0.98 + . g409.t1 Scaffold_6 AUGUSTUS start_codon 1718103 1718105 . + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_6 AUGUSTUS CDS 1718103 1718465 0.98 + 0 transcript_id "g409.t1"; gene_id "g409"; Scaffold_6 AUGUSTUS stop_codon 1718463 1718465 . + 0 transcript_id "g409.t1"; gene_id "g409"; # protein sequence = [MFLKIVLPGLDKSESVSSIRIKASDWEGVPDPSETAIQSETAKGGAHPNAKGGARYRYEQEFWIMLPPIEQEHEEKHY # LGTISWDSDERRISGDIRDADDNTKVLVEVKDGVLSGPKVRA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g409 ### # start gene g410 Scaffold_6 AUGUSTUS gene 1719307 1720256 0.49 - . g410 Scaffold_6 AUGUSTUS transcript 1719307 1720256 0.49 - . g410.t1 Scaffold_6 AUGUSTUS stop_codon 1719307 1719309 . - 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_6 AUGUSTUS CDS 1719307 1719862 0.85 - 1 transcript_id "g410.t1"; gene_id "g410"; Scaffold_6 AUGUSTUS CDS 1719994 1720256 0.5 - 0 transcript_id "g410.t1"; gene_id "g410"; Scaffold_6 AUGUSTUS start_codon 1720254 1720256 . - 0 transcript_id "g410.t1"; gene_id "g410"; # protein sequence = [MSNSSEATGFTFGSSSAPSTSAGVGSTKSPFTFGSGVSSTNVTSSAPFTFGVTPARPVTPPNQDREVSMEESPTRDVQ # VNKPAETRPSSKPVETKPFGTSTTQGGNATSSSFSFGRTPENEPPRPSTTGSFSFGTPAFRYKYRAWAHLLFGAPSNNSAHSNPFSAVQGGSTPNSPS # TFGPSSSFSFGSTPNAGSSSANPFSFGSQPASPATPSAGIPSSGFGAMTSNSFGPQLLVQDLVLLRLHLQVGLFTIGAAPSDSNRQIKRLPNRKKR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g410 ### # start gene g411 Scaffold_6 AUGUSTUS gene 1720666 1722073 0.88 - . g411 Scaffold_6 AUGUSTUS transcript 1720666 1722073 0.88 - . g411.t1 Scaffold_6 AUGUSTUS stop_codon 1720666 1720668 . - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_6 AUGUSTUS CDS 1720666 1721448 0.9 - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_6 AUGUSTUS CDS 1721501 1722073 0.97 - 0 transcript_id "g411.t1"; gene_id "g411"; Scaffold_6 AUGUSTUS start_codon 1722071 1722073 . - 0 transcript_id "g411.t1"; gene_id "g411"; # protein sequence = [MPSSLGASASSSNITDMFARKHTLVLMGDHDRPTKRDKKTKGKGRSKETNETKPYAGTTGIKKRLAKVKAPNHDVKGK # SASNEVSIPEQAAVSSPKEAIVPELPVPPPKEKDTFNVAAFPPSTSPAQQSSLRVGRAARSHLSRPIKKFSASYDDEDDKVGDDSKKDLEMLTEAAKK # VPTFEIPPGFSFAKELPPMQPAAAAKEPPISMLPFSLTSSAASPAPSAQTLSGEIDLGSSPSAGSPYGASLGPSCPIEDNGGASNSTVMADAAVKVPN # FFATSKTLAPQISASPATSQMPSASGLRSAFAFAPTTVSVAKELVPPPSNEDRKGPEAASSLFDVPAITSPPSFSFSSGGESTPALASFSAPVIDRSK # KDESQPLPLSFGPPVIPPPQATSQSSSVSFGGPVGNTTSSVSNAQFSFGTLATTATSAAATVAPSLTQPPFHSGLRHQI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g411 ### # start gene g412 Scaffold_6 AUGUSTUS gene 1724046 1724483 0.77 + . g412 Scaffold_6 AUGUSTUS transcript 1724046 1724483 0.77 + . g412.t1 Scaffold_6 AUGUSTUS start_codon 1724046 1724048 . + 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_6 AUGUSTUS CDS 1724046 1724483 0.77 + 0 transcript_id "g412.t1"; gene_id "g412"; Scaffold_6 AUGUSTUS stop_codon 1724481 1724483 . + 0 transcript_id "g412.t1"; gene_id "g412"; # protein sequence = [MFAKLCLIVFESLGKVPVPDPIISHIRKCTETYGKVKLVLKHNKYFVESSHPDILQKLLRDAVIQDARVISVQTDNSI # KGNTFTTSKAPVKGNLVIPGTNKEVDKSNDGVAKGKRDNADLFTSVVGVEGGALSLLGCSNFTNERL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g412 ### # start gene g413 Scaffold_6 AUGUSTUS gene 1726138 1726584 0.53 + . g413 Scaffold_6 AUGUSTUS transcript 1726138 1726584 0.53 + . g413.t1 Scaffold_6 AUGUSTUS start_codon 1726138 1726140 . + 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_6 AUGUSTUS CDS 1726138 1726584 0.53 + 0 transcript_id "g413.t1"; gene_id "g413"; Scaffold_6 AUGUSTUS stop_codon 1726582 1726584 . + 0 transcript_id "g413.t1"; gene_id "g413"; # protein sequence = [MFYSTKRQQFLIDQGYAFKVITSLDGQKDFPGLVYRTREEQIELLQSVLIANEADAEPGSDVRASEGDLAGTITSKDF # GQPSRFPGAQRMTSSLTSLSGAQHMSYIEQNKSMNKTLAKSAAGSASRHKLFQKRDRDKTAARKEAKKAA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g413 ### # start gene g414 Scaffold_6 AUGUSTUS gene 1731675 1732618 0.3 - . g414 Scaffold_6 AUGUSTUS transcript 1731675 1732618 0.3 - . g414.t1 Scaffold_6 AUGUSTUS stop_codon 1731675 1731677 . - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_6 AUGUSTUS CDS 1731675 1732091 0.4 - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_6 AUGUSTUS CDS 1732187 1732206 0.68 - 2 transcript_id "g414.t1"; gene_id "g414"; Scaffold_6 AUGUSTUS CDS 1732402 1732618 0.67 - 0 transcript_id "g414.t1"; gene_id "g414"; Scaffold_6 AUGUSTUS start_codon 1732616 1732618 . - 0 transcript_id "g414.t1"; gene_id "g414"; # protein sequence = [MGVLQGLGATSACNNGTFDASLTGNGQFNLQHNNAMFNTMSASSEPPAFNTIGVMNRLHDGRYIEPVAIGGNLDATAY # TGQLHTGHAHRQQLNGQQFDFENSLSSAINLARLQQLSQSHTDMHSHRAEYNPSFNIHDLRSPFHLKSKSLDSAVDQHFMAQELEYMNDMSPPSPIGT # YHVHPSQATATTLLMYFDSDVTTDEPKIHRDAEIQLGRCRC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g414 ### # start gene g415 Scaffold_6 AUGUSTUS gene 1734319 1735309 0.42 + . g415 Scaffold_6 AUGUSTUS transcript 1734319 1735309 0.42 + . g415.t1 Scaffold_6 AUGUSTUS start_codon 1734319 1734321 . + 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_6 AUGUSTUS CDS 1734319 1734348 0.42 + 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_6 AUGUSTUS CDS 1734428 1735309 0.96 + 0 transcript_id "g415.t1"; gene_id "g415"; Scaffold_6 AUGUSTUS stop_codon 1735307 1735309 . + 0 transcript_id "g415.t1"; gene_id "g415"; # protein sequence = [MNQLRWRNEHTVAAVTKGPLYTAPSEEDRRRLVADYIKRTGNAETELLVCCVCAREQLRVEVADNNDLEFPNADLLQP # ETPHRAHTLHKSMLLYTHSFTNRIPPYTCHDCLRQLHEGQRPRLALANNMWIGAIPFELRILTLPERVLVSRYFAAAYIVKLYPKKQGSRTLPPDMLT # SGLKGNVSSYFMNTQEIAGMVDNGFLPPRPSILAATIAVTFIGPNKVPLKALAPMLTVRRKRVADALRWLIANNPLYNGIHLSERNLQLLPEDGVPEE # IWGNVKWTDQVNLLEKEHAAMFLRITTRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g415 ### # start gene g416 Scaffold_6 AUGUSTUS gene 1737729 1739959 0.23 + . g416 Scaffold_6 AUGUSTUS transcript 1737729 1739959 0.23 + . g416.t1 Scaffold_6 AUGUSTUS start_codon 1737729 1737731 . + 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_6 AUGUSTUS CDS 1737729 1738323 0.23 + 0 transcript_id "g416.t1"; gene_id "g416"; Scaffold_6 AUGUSTUS CDS 1738428 1739959 0.84 + 2 transcript_id "g416.t1"; gene_id "g416"; Scaffold_6 AUGUSTUS stop_codon 1739957 1739959 . + 0 transcript_id "g416.t1"; gene_id "g416"; # protein sequence = [MVSPERPRGGWMLYKLMMMAVLKPWRNISDLVNGFRTVDDAWDDFLLQSGGKYETFLQNVQYFYECSDQSSSRREKEY # ATYEPVHNDHSNNVVDLEDDREGDIVEEEKSWSEEEILAAQQCEKGHEERFGITAMEHAFEVGIFEREYQFDASAPFARRCSSLDKVHYDEWAEQLKD # YAAKGLTIVGDAVGDIGSVCDAIEDHLRATLAALKPSQLLMILRGPGGTGKTVAINAVTETFKRLGVEAQLAKTATSGVAATLISGRTVHTWAGLSIG # GARGENWVEGSVKTAQKRIANIGPVEYLIIDEVSMATKDLLANLSDIVTHIRSKLDKPGEGLYFGGMNVILCGDFHQFPPVANGEAALYNTKCTGKHA # QKGLEIYNCFDKVVTLHQQMRIRDGRWQELLDRLRTGSCSREDIDILHSLRLDIPDNAKTDFNGTDWGNAVLITPRNSARRRWNASAIRRHCAKNNTR # LYSCPAEDTAKGSPLSNNQRMSVTRKTTKQTGNLAHRVEVAVGMKAMVLLNIATEADLANGTRGVVEGIVLDDREDANPEVVNGVTMLKYPPAVIFFR # PNGKTNVKIDGVQDGLLPIMPTDTSFTINLSDGSRRTVNRRQVALTPGYAFTDYKGQGQTLEYVIVDLEKPSGGPDISPFSAYVALSRSRGRGTIRLL # RGFEEKHFVTHPSAALKDEDLRLDFITKHTASWWTNGRRYTM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g416 ### # start gene g417 Scaffold_6 AUGUSTUS gene 1740954 1742099 1 + . g417 Scaffold_6 AUGUSTUS transcript 1740954 1742099 1 + . g417.t1 Scaffold_6 AUGUSTUS start_codon 1740954 1740956 . + 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_6 AUGUSTUS CDS 1740954 1742099 1 + 0 transcript_id "g417.t1"; gene_id "g417"; Scaffold_6 AUGUSTUS stop_codon 1742097 1742099 . + 0 transcript_id "g417.t1"; gene_id "g417"; # protein sequence = [MFADKNFILIDNCSALSANVLQKIATSLWDPEDLTQDIIPFGHRNVVLFGDFSQHPPIERHWDTLWWPNYEASDIVQH # VTKRVIVFHQDMTGAPTSWVNLTHRVRNGTLNGTDRVALNKRVVGLYGVPPVEDLSPEWTDGVVIASNAIQRQYWNINMASRVSRGSKKPLYITPSRD # EYVFGDGERMGVRDLEVLSGKLKQEFSVMQSLYLFEGMPVVILHGDLKNVWAQIINIVIDKREKRMPNAAEYRLAYAVKEVTVRLSAEAIRSGSRELI # TLTPTMHQFTLPHPSDERRRVLVERTQVPVMPRFALVEYETIGIRFKKIVVDTQNGLYAYQSPYMTITRSDSVYFSNRIQDSETEEDAVSANDLRKKV # DEIERSDRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g417 ### # start gene g418 Scaffold_6 AUGUSTUS gene 1746407 1748801 0.41 + . g418 Scaffold_6 AUGUSTUS transcript 1746407 1748801 0.41 + . g418.t1 Scaffold_6 AUGUSTUS start_codon 1746407 1746409 . + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_6 AUGUSTUS CDS 1746407 1746788 0.46 + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_6 AUGUSTUS CDS 1746842 1747371 0.59 + 2 transcript_id "g418.t1"; gene_id "g418"; Scaffold_6 AUGUSTUS CDS 1747515 1748801 0.69 + 0 transcript_id "g418.t1"; gene_id "g418"; Scaffold_6 AUGUSTUS stop_codon 1748799 1748801 . + 0 transcript_id "g418.t1"; gene_id "g418"; # protein sequence = [MEPILLRAIHSEVAARAADRSSTTPTVPPLHPSIPEEYAEFADVFDEIAADSLPEHRPYDLKIDLEEGASPPLGRIYP # LSEKELVALKDFIDKQLATGAITPSSSPHGAPVLFVPKKDGKLRLCVDFHLLDAPKRAKIYTKLDLAHAYHLVRIAEGDEWKTTFRTRYGSYEWKVMP # FGLTNAPAAFQRFVNDIFSDMLDVCVIVYLDDILIYSDTPEEHREHVKEVLRRLRKHRLYANPEKCEFNMDTVEYLGYILSPDGLTMSKEKVQTVLEW # PVPRKVKDIQSFLGFANFYRRFIYNYSDIVTDASDYAIAAILSIQYADGEIHPLAFLSRTLHAAELNYDTHDKELLAIFEAFKAWRHYLEGSGDPVDV # VTDHKNLEYFSTTKVLTRRQVRWSEFLHQFNMVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFVLSLLTNNSLRLFELPSGRPGFTSLDY # HGYRSPTPSHSRPSRRPSSVAGLELAKDPSNERWSLGSDKLLRLDDRILCPNHGDLRLQVLRYFHDHPLSGHFGQNRTLEAVRRQYTWPKVRDFVRDY # VTSCTICGRNKPRRHRPYGLLKPLPVPVRPWDSISMDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVLIMLLPIV # VPNLFRRSSGLSVKRSPWNFTIPLDIIRKPMGKLSVSIRLSNSTSGSIVPTNKMTGRLTSDRRVRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g418 ### # start gene g419 Scaffold_6 AUGUSTUS gene 1765500 1765988 0.81 - . g419 Scaffold_6 AUGUSTUS transcript 1765500 1765988 0.81 - . g419.t1 Scaffold_6 AUGUSTUS stop_codon 1765500 1765502 . - 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_6 AUGUSTUS CDS 1765500 1765988 0.81 - 0 transcript_id "g419.t1"; gene_id "g419"; Scaffold_6 AUGUSTUS start_codon 1765986 1765988 . - 0 transcript_id "g419.t1"; gene_id "g419"; # protein sequence = [MSPVHSLSSSPKQRPPAQSLKLGGSRPFLPSSNSFSPPTTQRNLGLGFDPTVTSSNTTSPFMAALQPSNTFSSPSQPV # PPLSGGPQPQRPNYDILLPSVTPVHNPTLALSTSASPKPAMTPTLMHNSPMSSSLLTPSKPAQPSWKSSNKPTKDDWGDFDPLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g419 ### # start gene g420 Scaffold_6 AUGUSTUS gene 1766052 1766546 0.35 - . g420 Scaffold_6 AUGUSTUS transcript 1766052 1766546 0.35 - . g420.t1 Scaffold_6 AUGUSTUS stop_codon 1766052 1766054 . - 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_6 AUGUSTUS CDS 1766052 1766546 0.35 - 0 transcript_id "g420.t1"; gene_id "g420"; Scaffold_6 AUGUSTUS start_codon 1766544 1766546 . - 0 transcript_id "g420.t1"; gene_id "g420"; # protein sequence = [MATLSVQEAMGSKVDREAVATLVLPQLWNMSMGPCELYDAHHFFLSYALINLTVLNVGQFQRFMEVIRKLGDRVEKEH # NQFLRDSQRLEDRSAVAVDGATVTQSFVGSMDFESLVGGKNGAVQTNATGGSVGSAAGKTSWDDDVWGSIFNDTVSSLPMNNYHSM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g420 ### # start gene g421 Scaffold_6 AUGUSTUS gene 1769268 1769831 0.97 - . g421 Scaffold_6 AUGUSTUS transcript 1769268 1769831 0.97 - . g421.t1 Scaffold_6 AUGUSTUS stop_codon 1769268 1769270 . - 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_6 AUGUSTUS CDS 1769268 1769680 0.99 - 2 transcript_id "g421.t1"; gene_id "g421"; Scaffold_6 AUGUSTUS CDS 1769753 1769831 0.98 - 0 transcript_id "g421.t1"; gene_id "g421"; Scaffold_6 AUGUSTUS start_codon 1769829 1769831 . - 0 transcript_id "g421.t1"; gene_id "g421"; # protein sequence = [MALLYASENDNEVETFTASEDTLKSHYQGNDLYYDDTADAEWDGSEYEEVIDGDQGADTTIDTEADGEYEYASAQSSI # TLWSRHSKRSIHDLDEDEIEIDKSKGLVSVQSSQVNFYVSTTSSGFRVVTSVFRFEKGSYGMRFLRSGLFSGSKIDKYAASRILS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g421 ### # start gene g422 Scaffold_6 AUGUSTUS gene 1769863 1770564 0.98 - . g422 Scaffold_6 AUGUSTUS transcript 1769863 1770564 0.98 - . g422.t1 Scaffold_6 AUGUSTUS stop_codon 1769863 1769865 . - 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_6 AUGUSTUS CDS 1769863 1770564 0.98 - 0 transcript_id "g422.t1"; gene_id "g422"; Scaffold_6 AUGUSTUS start_codon 1770562 1770564 . - 0 transcript_id "g422.t1"; gene_id "g422"; # protein sequence = [MRLNLADADEEYNAEELNESSLQETTGAVMCSPLDFICLDVSIPEQEHGPDLSEEIVEEYQEQAEETINENHLQSEEN # TESDSAEVQLDLTNEGDAEHPDELAVSDYDQYPQDTEAAENEEAVEGNTLYDDAQGPEEQDQEDNGEGIVEEPTEPTFIEISETSEILDGTQELKKLR # RTRKRFANTCLSFKLPDHISDQQIASVTVEDELQKKPSRIQEGSPQSQDESHELGKA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g422 ### # start gene g423 Scaffold_6 AUGUSTUS gene 1770721 1772031 0.95 - . g423 Scaffold_6 AUGUSTUS transcript 1770721 1772031 0.95 - . g423.t1 Scaffold_6 AUGUSTUS stop_codon 1770721 1770723 . - 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_6 AUGUSTUS CDS 1770721 1772031 0.95 - 0 transcript_id "g423.t1"; gene_id "g423"; Scaffold_6 AUGUSTUS start_codon 1772029 1772031 . - 0 transcript_id "g423.t1"; gene_id "g423"; # protein sequence = [MLDKSLEVTKLRGLNFLSGTMATVFEQYDTPMLDYHPDADVQMHGNLDPWFHEEAHMESEDIHLASTRSSDEDLVDVE # IEMENYLDEDSQNPEYEMLDEVEAPSYFVVADPEDIVVMDASHQSSVLRDSTLESIALSELPSQSLASSVESAASPLDPQNNVAAEPKVPSTESHFHS # SDFDSVPVNGPSEPEEPITSTVLEEVISPEPLSAYISLEKPSTHAEVSSTEATHVANTITDSAVASNHDDILTKAAVLPAEEAKGSAQTEAEVIHHLP # VDEGVVDSTEVEAGTVDQSESVISNVAGSVERPVEHVENEEESRVSELDPHEISEGVYIDPPPAVLLSFAFLDYPDVCLFNQPSQYDPSSSTTEPTSC # SVLLSDQPTLYYEPLSTVFEALRNDNELSSIADLSQVELVLDAYDLELTLFQRFAVNCLCYYGG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g423 ### # start gene g424 Scaffold_6 AUGUSTUS gene 1774512 1775587 0.31 + . g424 Scaffold_6 AUGUSTUS transcript 1774512 1775587 0.31 + . g424.t1 Scaffold_6 AUGUSTUS start_codon 1774512 1774514 . + 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_6 AUGUSTUS CDS 1774512 1775112 0.32 + 0 transcript_id "g424.t1"; gene_id "g424"; Scaffold_6 AUGUSTUS CDS 1775205 1775587 0.41 + 2 transcript_id "g424.t1"; gene_id "g424"; Scaffold_6 AUGUSTUS stop_codon 1775585 1775587 . + 0 transcript_id "g424.t1"; gene_id "g424"; # protein sequence = [MYVDFYCMFWTTYILYQKIQQGQLEERSLEDRKIDHVRLSNGSEPKTPTSVCTLPPDSKYIPLNPHLQLTKSISTFLA # QKRANNEASNRAEFLRSLANLRPQDEASSDASNMESPSSCARTDAKAIDRNAQIKYDIVKNEDGPLRRTMRSRDVSGSTTTTVLPSTSTYKGKAKATA # FKNEKAEATVVKDLSSERHPGLDDLPYAPQSLLDRLRFLEEHIIKLEKDYPPWAAIHFNQPSRNVGSSEFSSPVNLLTLCQWPPPPKQTPIIVPTSMS # RQPKLDASSYLAPIAGAASYAGGLTRAKNSSLHRAVMEKLEVHNAKLDLTGGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g424 ### # start gene g425 Scaffold_6 AUGUSTUS gene 1778102 1778449 0.46 + . g425 Scaffold_6 AUGUSTUS transcript 1778102 1778449 0.46 + . g425.t1 Scaffold_6 AUGUSTUS start_codon 1778102 1778104 . + 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_6 AUGUSTUS CDS 1778102 1778449 0.46 + 0 transcript_id "g425.t1"; gene_id "g425"; Scaffold_6 AUGUSTUS stop_codon 1778447 1778449 . + 0 transcript_id "g425.t1"; gene_id "g425"; # protein sequence = [MVEHPSTENLCEGTKDAVHREKAHRQHPQRQPNSKATLQWKHAADLAVRWVRSRAHYQDHLNVATTEHMSSVDIHDGK # QMRTSSVHENQQKQNIDEDLLVVDPQVDGRFEDVGRK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g425 ### # start gene g426 Scaffold_6 AUGUSTUS gene 1790694 1791503 0.28 - . g426 Scaffold_6 AUGUSTUS transcript 1790694 1791503 0.28 - . g426.t1 Scaffold_6 AUGUSTUS stop_codon 1790694 1790696 . - 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS CDS 1790694 1790902 0.82 - 2 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS CDS 1791042 1791082 0.82 - 1 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS CDS 1791134 1791143 0.59 - 2 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS CDS 1791302 1791345 0.41 - 1 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS CDS 1791400 1791503 0.42 - 0 transcript_id "g426.t1"; gene_id "g426"; Scaffold_6 AUGUSTUS start_codon 1791501 1791503 . - 0 transcript_id "g426.t1"; gene_id "g426"; # protein sequence = [MLDQFDKLKRRNAFLEQYKKEKMFENGLEEFDDARATCEELLNEYKSCEMSVLIGRRLEVGSQLLRGAGQERVGSGKG # KEREATEATLVLRFFDGSEPMHITSHVDSSLLKYAASQFFELQTTRLPCTLKYISLM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g426 ### # start gene g427 Scaffold_6 AUGUSTUS gene 1801496 1802503 0.98 - . g427 Scaffold_6 AUGUSTUS transcript 1801496 1802503 0.98 - . g427.t1 Scaffold_6 AUGUSTUS stop_codon 1801496 1801498 . - 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_6 AUGUSTUS CDS 1801496 1802503 0.98 - 0 transcript_id "g427.t1"; gene_id "g427"; Scaffold_6 AUGUSTUS start_codon 1802501 1802503 . - 0 transcript_id "g427.t1"; gene_id "g427"; # protein sequence = [MQSSSSTDAPTGTPPSTTPSSLYPPLKDPWAPVPHAKNKSGKSNSATHHNAKIAVAPPRSSHLPKSSSPFGHSYRLRE # QPPYGQGISSSSPLPPSPSLRPASYLAKRYQRPQKNESRCLQHILPGLFIAFESDRIAFGPPTSSLRIPPEEELRTTNGERFTHIIKLSASKDQSESP # DIQHHVDSYETQVLNLGISPNSPNFFGLRMHILTSEVDEVPFEAAHRLYTDHRDYNNEHSGGIPLLTQKQLLASREFMCGTGYDLHRHQGARILITAP # RDHCTDMISVLTCYLAYASGNTAAMVLHEIDKHEGFLGIWKNTVSQYAVSIIQEVVDMRLC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g427 ### # start gene g428 Scaffold_6 AUGUSTUS gene 1807676 1808472 0.23 - . g428 Scaffold_6 AUGUSTUS transcript 1807676 1808472 0.23 - . g428.t1 Scaffold_6 AUGUSTUS stop_codon 1807676 1807678 . - 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_6 AUGUSTUS CDS 1807676 1807936 0.96 - 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_6 AUGUSTUS CDS 1808079 1808217 0.7 - 1 transcript_id "g428.t1"; gene_id "g428"; Scaffold_6 AUGUSTUS CDS 1808465 1808472 0.32 - 0 transcript_id "g428.t1"; gene_id "g428"; Scaffold_6 AUGUSTUS start_codon 1808470 1808472 . - 0 transcript_id "g428.t1"; gene_id "g428"; # protein sequence = [MLCVSQDGGYAEYVTLRTEAVLPISKDLDPAEAAPLLCAGITTFNALRHMGFKVVALSQSDAKKDLATKLGADIYLDG # SKVNQVEELMKLGGAKVILATAPQGDAITTLLGGLKVGGTMLTVASKYEFHVLECVI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g428 ### # start gene g429 Scaffold_6 AUGUSTUS gene 1822284 1822650 0.51 - . g429 Scaffold_6 AUGUSTUS transcript 1822284 1822650 0.51 - . g429.t1 Scaffold_6 AUGUSTUS stop_codon 1822284 1822286 . - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_6 AUGUSTUS CDS 1822284 1822454 0.71 - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_6 AUGUSTUS CDS 1822507 1822650 0.51 - 0 transcript_id "g429.t1"; gene_id "g429"; Scaffold_6 AUGUSTUS start_codon 1822648 1822650 . - 0 transcript_id "g429.t1"; gene_id "g429"; # protein sequence = [MIALIDPLIVRYVPTWFPFTGWKTFALDSTERRKIQVDGAFELVKKAMKEGTAHPSMVSRYLEENENGGDIPEVAIMD # MASDAYGGEYLEKIDVYETEDDHRWC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g429 ### # start gene g430 Scaffold_6 AUGUSTUS gene 1832101 1832636 0.31 + . g430 Scaffold_6 AUGUSTUS transcript 1832101 1832636 0.31 + . g430.t1 Scaffold_6 AUGUSTUS start_codon 1832101 1832103 . + 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_6 AUGUSTUS CDS 1832101 1832130 0.32 + 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_6 AUGUSTUS CDS 1832214 1832636 0.59 + 0 transcript_id "g430.t1"; gene_id "g430"; Scaffold_6 AUGUSTUS stop_codon 1832634 1832636 . + 0 transcript_id "g430.t1"; gene_id "g430"; # protein sequence = [MNSKAVVHDQIAYEPAWIPTGCEDIAPRTAVRLEPGITFNDLYAFGEANNITLPGGSTPSVSATGGYVLGGGHGGLSN # TAGLGADRALEFTVVVPTGDVLIANACQNQDLFFALRGGGGGTFGVVMETVTLALPRTPIQVCVFCTWIDPI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g430 ### # start gene g431 Scaffold_6 AUGUSTUS gene 1834302 1834861 0.26 - . g431 Scaffold_6 AUGUSTUS transcript 1834302 1834861 0.26 - . g431.t1 Scaffold_6 AUGUSTUS stop_codon 1834302 1834304 . - 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_6 AUGUSTUS CDS 1834302 1834606 0.81 - 2 transcript_id "g431.t1"; gene_id "g431"; Scaffold_6 AUGUSTUS CDS 1834660 1834861 0.32 - 0 transcript_id "g431.t1"; gene_id "g431"; Scaffold_6 AUGUSTUS start_codon 1834859 1834861 . - 0 transcript_id "g431.t1"; gene_id "g431"; # protein sequence = [MRYNSVTQDGAYAEYVTLRTEAVLPVPKELDPAEAAPLLCAGITTFNALRNVPDLKKGDLVAVLGLGGLGHLGIQYAK # QMGYKVVALSQSDAKKEMAIKLGADIYLDGSKVNQVEELMKLGGAKVILATAPQGEAIATLLGGLKVGGTMLTVASKYKICFSVGNIANL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g431 ### # start gene g432 Scaffold_6 AUGUSTUS gene 1838712 1839594 0.98 + . g432 Scaffold_6 AUGUSTUS transcript 1838712 1839594 0.98 + . g432.t1 Scaffold_6 AUGUSTUS start_codon 1838712 1838714 . + 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_6 AUGUSTUS CDS 1838712 1839134 0.98 + 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_6 AUGUSTUS CDS 1839178 1839594 1 + 0 transcript_id "g432.t1"; gene_id "g432"; Scaffold_6 AUGUSTUS stop_codon 1839592 1839594 . + 0 transcript_id "g432.t1"; gene_id "g432"; # protein sequence = [MGAWRLDFNLPVERFSKTEIAGVRHLIDLSLAQPLLHTRFIFISSIGSVQNHSSISAVPEQSFSVPSIAGFDGYSQSK # YTAERIIDVAVSRAGLDAIIIRGGQLSGSSQNGYWNPKEYIPSLFKTSAAIRAFPDHFMVSSPEIRWLPVDIAGKIVVKLSLNATSRGYYHLENPVST # SWSYLVNLLSSHAQKAAKPTPVEPVPMSEWLRLIVQASQVKSVDEIPAIKLMDFFRGIGENTNGEGANAVVLDVQRTREVAPEIDVGVLSDVVLLSYW # DTAST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g432 ### # start gene g433 Scaffold_6 AUGUSTUS gene 1841562 1842084 0.93 + . g433 Scaffold_6 AUGUSTUS transcript 1841562 1842084 0.93 + . g433.t1 Scaffold_6 AUGUSTUS start_codon 1841562 1841564 . + 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_6 AUGUSTUS CDS 1841562 1841711 0.99 + 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_6 AUGUSTUS CDS 1841785 1842084 0.94 + 0 transcript_id "g433.t1"; gene_id "g433"; Scaffold_6 AUGUSTUS stop_codon 1842082 1842084 . + 0 transcript_id "g433.t1"; gene_id "g433"; # protein sequence = [MVLQDNGDTTGLFNSAASVDPATGNRTYSGRNYLLPNVGRSNLAVLTGAQSGGNATATGVQFTANGTNYTVSSRKEVI # LSAGSLHTPQLLELSGIGDEARLTALGIPVVVANSDVGENLQVGYPPPVVLPFIYRTTTGSSNIEFRILAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g433 ### # start gene g434 Scaffold_6 AUGUSTUS gene 1842822 1843361 0.98 + . g434 Scaffold_6 AUGUSTUS transcript 1842822 1843361 0.98 + . g434.t1 Scaffold_6 AUGUSTUS start_codon 1842822 1842824 . + 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_6 AUGUSTUS CDS 1842822 1843361 0.98 + 0 transcript_id "g434.t1"; gene_id "g434"; Scaffold_6 AUGUSTUS stop_codon 1843359 1843361 . + 0 transcript_id "g434.t1"; gene_id "g434"; # protein sequence = [MSVDQLSTDKEVLVKGAQVTRNLSQIAPLSSFIASPLNPSANVTTDEDFEKYVPTTYDYRNMDHSCDNHSFVIENVGT # EWHQVGTASLGPFGEGGVVASDLIVYGTSNLRVVDARSVLNFELMQMPITNAPYSIMPMQIGAHIQATVYAIAEKVSVNTDIIFSGFNKVSQAADIIK # AAQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g434 ### # start gene g435 Scaffold_6 AUGUSTUS gene 1846568 1847788 0.66 + . g435 Scaffold_6 AUGUSTUS transcript 1846568 1847788 0.66 + . g435.t1 Scaffold_6 AUGUSTUS start_codon 1846568 1846570 . + 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_6 AUGUSTUS CDS 1846568 1847788 0.66 + 0 transcript_id "g435.t1"; gene_id "g435"; Scaffold_6 AUGUSTUS stop_codon 1847786 1847788 . + 0 transcript_id "g435.t1"; gene_id "g435"; # protein sequence = [MGASHSSVAHPGSFQTPVKVQPQLMPNFKSPPLDHQNVGRRASSSIPSSSMSGVGAGTKKGPLIFAAMATVQQPQPPQ # STSYNISSSAYPSPPAEYGLYASPSPPTSFQKQHTAPSSNSKRHSHVPDHRLSTPYPINTMKAQPPLPPTPSQNPPPHSSTLINSRRKSTSQKPSAKM # APPSTPPPLQQQPQRNGMVITGPPPSSSSSVTHHRTLTKSRHPLPPATPPKQVQQRPTPPVSPEVPARDKSPSQIVTPRTPTVISNEEFESAERRVAI # PLDDDPFARTEGVRMLKPTGIGAREDPPSSSSLSSSSLPLESEARPTVLSDERDESPKESQAQTVSLVNSDETTNYDDEQGDTSSSDNDNVTHANESM # TMAEPEVMNPATADGFFPPSAAHYPIAHANPKTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g435 ### # start gene g436 Scaffold_6 AUGUSTUS gene 1848270 1848872 0.3 + . g436 Scaffold_6 AUGUSTUS transcript 1848270 1848872 0.3 + . g436.t1 Scaffold_6 AUGUSTUS start_codon 1848270 1848272 . + 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_6 AUGUSTUS CDS 1848270 1848872 0.3 + 0 transcript_id "g436.t1"; gene_id "g436"; Scaffold_6 AUGUSTUS stop_codon 1848870 1848872 . + 0 transcript_id "g436.t1"; gene_id "g436"; # protein sequence = [MVNATRAYNRVVLRLRAQAELMASSPNLSNSNLAHPIGYVASPRSLPSNSRSVSRAPSPSSSFTHGRSVAHGYGSQNG # HDGPGASNPNVYMNSLTGFRSPLFRTGRAPLLRVFIPSPEGDWLSDASVLECEAELRRAGLLPDKDKRGSENKGINLLRLGDVVWDMAVGDDGNAGRM # VWDGSYLIVSCLFILIILFVQRLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g436 ### # start gene g437 Scaffold_6 AUGUSTUS gene 1861309 1862791 0.5 - . g437 Scaffold_6 AUGUSTUS transcript 1861309 1862791 0.5 - . g437.t1 Scaffold_6 AUGUSTUS stop_codon 1861309 1861311 . - 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_6 AUGUSTUS CDS 1861309 1861700 1 - 2 transcript_id "g437.t1"; gene_id "g437"; Scaffold_6 AUGUSTUS CDS 1861802 1862118 0.83 - 1 transcript_id "g437.t1"; gene_id "g437"; Scaffold_6 AUGUSTUS CDS 1862235 1862791 0.55 - 0 transcript_id "g437.t1"; gene_id "g437"; Scaffold_6 AUGUSTUS start_codon 1862789 1862791 . - 0 transcript_id "g437.t1"; gene_id "g437"; # protein sequence = [MEDVPLEMPPLHEDGEQERYSPVPDSPQHMPLLDGDDGAVADDSAAALLPEAHEEPRSRSNDAGRRHSGGSAHTGESS # SLVRVETNAETENPDPRGDAPAYFEVVDLNDEAQQRPPIPPIPSSEPTPTNSSMTAASSTASRGTSSRRSLRNLFGWSGRSPMTPPGLPSTSAQSHER # ADSGGALSLVSNHLTSPSSISLASISAPLTHTVVRTEFTYPKAGPTPEQLKLISSREAFARFGVPYGKDAIAFAASTQDLNPPPEFESEAGPSSSSPP # RSQSQTRVVARESIGRSKPDTPATTVESSSPSQKEPKVSDLTQPSPLVDSTVSSKDIVEIPGTSSETRISSLNHSPKDDVVPPSHSAAPSVSLAQHAP # LASPSTPTISSKPPPTSFRNHQPQKPLRPVSVPNPALPLSDPLKLPESR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g437 ### # start gene g438 Scaffold_6 AUGUSTUS gene 1874628 1875542 0.98 - . g438 Scaffold_6 AUGUSTUS transcript 1874628 1875542 0.98 - . g438.t1 Scaffold_6 AUGUSTUS stop_codon 1874628 1874630 . - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_6 AUGUSTUS CDS 1874628 1875542 0.98 - 0 transcript_id "g438.t1"; gene_id "g438"; Scaffold_6 AUGUSTUS start_codon 1875540 1875542 . - 0 transcript_id "g438.t1"; gene_id "g438"; # protein sequence = [MHILRSTYLPSYDALIRPPYSSDPFPSSNSVPLYGTSTSMWNSPYGSSRLFPQHRELQTLDLFIAVLAQEELLYDTSS # LHLSRHEAYKDIFDLRQPQSRLEDLVAKEGVKAGLVTLGDRDSVPGTPTTPQTPSEAKGKENSPYFMDIDNNSSLLALPRASTSSLSKPLKKAKSTFS # MFSAFSSKGKGKGKATIAVQRLSQPAERKVSLSPLPFRSLSINFSTRKISLMYAPSYCASSKSSLTVTGTSSSSAYGGSTYGALGVSYNSRGRKRTIV # EVQRDRDEALEVSVRRVVRGLREWMEEEAR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g438 ### # start gene g439 Scaffold_6 AUGUSTUS gene 1879202 1879948 0.79 - . g439 Scaffold_6 AUGUSTUS transcript 1879202 1879948 0.79 - . g439.t1 Scaffold_6 AUGUSTUS stop_codon 1879202 1879204 . - 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_6 AUGUSTUS CDS 1879202 1879948 0.79 - 0 transcript_id "g439.t1"; gene_id "g439"; Scaffold_6 AUGUSTUS start_codon 1879946 1879948 . - 0 transcript_id "g439.t1"; gene_id "g439"; # protein sequence = [MASRLRISVNVSLIHEEKIMHIMLRLEGCVFGFAATRHSLIRFPISATTVNSEILSQIEGSSGSIQVEIFHQAKAKDP # PNDALPKFFEIYTSKKRVGILSKETHVGKLVSEWNKLVSEASSKPELVDMSVAVSAFMAQKDQEELVCRSFVIHKKDILIYDQKTIQIASSLTSTLLK # HHVGPRLETILDKESKISHEMLAAQIEGRLGSGEGSNAKGPDMKVWNKGKGLEKVRLWLILSRTKSKRSFAD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g439 ### # start gene g440 Scaffold_6 AUGUSTUS gene 1892278 1893369 0.86 - . g440 Scaffold_6 AUGUSTUS transcript 1892278 1893369 0.86 - . g440.t1 Scaffold_6 AUGUSTUS stop_codon 1892278 1892280 . - 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_6 AUGUSTUS CDS 1892278 1892729 0.95 - 2 transcript_id "g440.t1"; gene_id "g440"; Scaffold_6 AUGUSTUS CDS 1892964 1893369 0.87 - 0 transcript_id "g440.t1"; gene_id "g440"; Scaffold_6 AUGUSTUS start_codon 1893367 1893369 . - 0 transcript_id "g440.t1"; gene_id "g440"; # protein sequence = [MLKDTVASNSSPEEDSLESLLSHDAQGRLQFGDPKKRHKRTMQALTTISAITEATRGLKAQIGAISLSHTSAEINAIL # CTVEDGSEALRRHISSVTRTAVSEEVKEARAMLDLLDQAVSTWRVEYPDSSPVKIDNRSDSRCYPESIETLEKKFNLDIDCIPYAVCPNAATTSSSYP # NDASHPVYPTVCSEIKAVSEEPCGTPLLLHGKPLKTFEYYPFFEWFGKFLSLPGIEDYGDRFCDIVGNHQTIPVDKVDETDGRFVHEFCAQDGELFVA # DRGDEDVGSLS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g440 ### # start gene g441 Scaffold_6 AUGUSTUS gene 1894194 1894508 0.56 + . g441 Scaffold_6 AUGUSTUS transcript 1894194 1894508 0.56 + . g441.t1 Scaffold_6 AUGUSTUS start_codon 1894194 1894196 . + 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_6 AUGUSTUS CDS 1894194 1894508 0.56 + 0 transcript_id "g441.t1"; gene_id "g441"; Scaffold_6 AUGUSTUS stop_codon 1894506 1894508 . + 0 transcript_id "g441.t1"; gene_id "g441"; # protein sequence = [MKLDTSAETAAKMQDAPWNKMVVSFLASVASDRASVDPDYFGTDKGELDWSSLFRERDCIASFSKLQSPKAASETLPM # RERSMKVEREGCADMYAVVQSFVPSY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g441 ### # start gene g442 Scaffold_6 AUGUSTUS gene 1895605 1896426 0.75 - . g442 Scaffold_6 AUGUSTUS transcript 1895605 1896426 0.75 - . g442.t1 Scaffold_6 AUGUSTUS stop_codon 1895605 1895607 . - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_6 AUGUSTUS CDS 1895605 1896426 0.75 - 0 transcript_id "g442.t1"; gene_id "g442"; Scaffold_6 AUGUSTUS start_codon 1896424 1896426 . - 0 transcript_id "g442.t1"; gene_id "g442"; # protein sequence = [MQSSPLSARSNSIMDPYRNFDLRPLCADHKEMLPPPVVAAAVDHTPIAPSSGPARTSRDTLRVSPYNSPSPEPLQRRP # HTAALPSSSSSSIESLSSELEYDSDRERIARLRNTQRVSHPYSGNHGVPVHRTPWCAKSPTADNAHAASSTTGKATQGVDDNQAEGESRSRKGVTFST # EPTRRRSPPALVFEDDSDDDFLIPKPPGEVGRPGRGGYSLFEVLGWPKKKYDKVKVSLCFCDAVCSLRSLFPRNSSTALSRTIWTVSFLWANNRQPM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g442 ### # start gene g443 Scaffold_6 AUGUSTUS gene 1904625 1905029 0.84 - . g443 Scaffold_6 AUGUSTUS transcript 1904625 1905029 0.84 - . g443.t1 Scaffold_6 AUGUSTUS stop_codon 1904625 1904627 . - 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_6 AUGUSTUS CDS 1904625 1904900 0.84 - 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_6 AUGUSTUS CDS 1905000 1905029 0.84 - 0 transcript_id "g443.t1"; gene_id "g443"; Scaffold_6 AUGUSTUS start_codon 1905027 1905029 . - 0 transcript_id "g443.t1"; gene_id "g443"; # protein sequence = [MYKIITVNVKDQEFVRIYIYTDKSVQIRVTRMTEMTYLLTALSAALSSNPLRKFLIDTLLPQATRRTSPSTRPPPRFW # TDWFGGSNLCRLKNTKNLNDFPP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g443 ### # start gene g444 Scaffold_6 AUGUSTUS gene 1906478 1906990 0.86 - . g444 Scaffold_6 AUGUSTUS transcript 1906478 1906990 0.86 - . g444.t1 Scaffold_6 AUGUSTUS stop_codon 1906478 1906480 . - 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_6 AUGUSTUS CDS 1906478 1906990 0.86 - 0 transcript_id "g444.t1"; gene_id "g444"; Scaffold_6 AUGUSTUS start_codon 1906988 1906990 . - 0 transcript_id "g444.t1"; gene_id "g444"; # protein sequence = [MITICRRRRDEAGVAFWSHTLEVTDILQDGSQSDEEDASVDVEIEGVMMKQDVKKVSRLYWRNPDVEDLYIVADRAPG # VEAGIFHRAGAPRIPRIRTDKVSHREPPRGLPRCFFREEYLSALMPYELEELELANYNVEMYDFKNYDPNTENGEGYVPNAENDDLQDMDTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g444 ### # start gene g445 Scaffold_6 AUGUSTUS gene 1909168 1910932 0.17 - . g445 Scaffold_6 AUGUSTUS transcript 1909168 1910932 0.17 - . g445.t1 Scaffold_6 AUGUSTUS stop_codon 1909168 1909170 . - 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_6 AUGUSTUS CDS 1909168 1910040 0.48 - 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_6 AUGUSTUS CDS 1910651 1910932 0.37 - 0 transcript_id "g445.t1"; gene_id "g445"; Scaffold_6 AUGUSTUS start_codon 1910930 1910932 . - 0 transcript_id "g445.t1"; gene_id "g445"; # protein sequence = [MLVHHSLYEDQSLTYCFTQLRGELALSNQQKTKLEEKLSEASENINHLTEKNNTLSLEVSVVHSKLDEVEEDCQQLSN # DFNLLKEDHEALGALESLDDAVAANRRIQDAKAALFKQSADVSAESDRRIGELTEENEGLANDAASASRRLKELVHENEVLVQESTEAAALAHQRILE # LTSEKEKMENDAVSTTQDVQKLADEKSTLIRQLAATDLKNRQLDDEKTSMMENMGSANRRIQELLDQKKTLVQESVDAASTVSRTIRKLTDEKAKLVN # DAALANQRIQALTDEKGVLTQRVEAAATTARQRIQELVNEKAKLVTDLASAGQTSQDERRKLTLAEAAAVQKNQEYVDEKANLLQQLEQQNVELRRLK # VIASLSLLSFQC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g445 ### # start gene g446 Scaffold_6 AUGUSTUS gene 1920386 1921019 0.91 - . g446 Scaffold_6 AUGUSTUS transcript 1920386 1921019 0.91 - . g446.t1 Scaffold_6 AUGUSTUS stop_codon 1920386 1920388 . - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_6 AUGUSTUS CDS 1920386 1920687 0.93 - 2 transcript_id "g446.t1"; gene_id "g446"; Scaffold_6 AUGUSTUS CDS 1920755 1921019 0.91 - 0 transcript_id "g446.t1"; gene_id "g446"; Scaffold_6 AUGUSTUS start_codon 1921017 1921019 . - 0 transcript_id "g446.t1"; gene_id "g446"; # protein sequence = [MLSSAGSYGALPKVVTEACNELMAWQEENTDFYYRIGFIPPLIGVREQLAQLVGASDVDELVMVPNASTGLGVVLRNF # LWQCGDTIIRCNTTYATVYKTIQYIHDVTPGLEISEFQLLFPTTRQAILDGWQKHITNVKANAPQGQKIVAVIDSVVANPAAAMPWKEMVKICKDVGI # WTIIDGTSSALI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g446 ### # start gene g447 Scaffold_6 AUGUSTUS gene 1933898 1935052 0.51 - . g447 Scaffold_6 AUGUSTUS transcript 1933898 1935052 0.51 - . g447.t1 Scaffold_6 AUGUSTUS stop_codon 1933898 1933900 . - 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_6 AUGUSTUS CDS 1933898 1935052 0.51 - 0 transcript_id "g447.t1"; gene_id "g447"; Scaffold_6 AUGUSTUS start_codon 1935050 1935052 . - 0 transcript_id "g447.t1"; gene_id "g447"; # protein sequence = [MNLVTSVVRQANSVARTIPATFLRGGTSKGIFLQRSHLPQDTSKWNEIFLGLMGSPDAEYGRQLDGMGGGISSLSKIC # VVQPASLEQLQTLGVDVEYTFVQVGIRDSTIDYSGNCGNLSSMIGVFALDEGMVDNTAQRIQNSRITVRAFNTNTRKIVNTTFPIDPDSGMADLTLPE # TRIAGVSGEASQIQLDFHKPSGARTGKLLPAEVPMTKLEITEGTFCASLVDATNPTIFVDRAEIVNVSKTEDPGSHEQLRLLEILRREGAIRMGLDPN # AQAQPKIAMLSPPKATDSDADIEIIALSMGVPHKAVPMTVGLCLGVAANTRGTLPSKFLRRKIVGESKLVKLRHPGGVVEVGALFDTEGKVESASVIR # TGRRLMKGYVWY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g447 ### # start gene g448 Scaffold_6 AUGUSTUS gene 1936127 1937236 0.61 + . g448 Scaffold_6 AUGUSTUS transcript 1936127 1937236 0.61 + . g448.t1 Scaffold_6 AUGUSTUS start_codon 1936127 1936129 . + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_6 AUGUSTUS CDS 1936127 1937236 0.61 + 0 transcript_id "g448.t1"; gene_id "g448"; Scaffold_6 AUGUSTUS stop_codon 1937234 1937236 . + 0 transcript_id "g448.t1"; gene_id "g448"; # protein sequence = [MSFGRLRRDGTFTIEHSFAGKIHCDLVRRRLVVTLVREQTSNVVDGHPAHDTFLSIFNRLSVEDMIPSPIFSYSSSSV # QAVRRSSSTQESELHLEFSNPAIFEQPHAASFLNRQQSSQRLTVTGLPGCNFMPLVSQNLRIIFSNDDELLQFLTRAHNIQLPPARFIAISTIDVRVY # NNDRFDELMTFTRTLPFPLGFQLEKSVWDGIIEPSELYEKNMRQAILKVQEDHPEIAAPIFRYFVSTLQIPTFRDPPRSPPRPRSEPSEDSLSKSARR # RRKQRNRRRELASADNKGLELHEQLAQAAHAYVLDSQRPQRRYASSPNPALYEAYHVSITPSRQVLEGPLPDLSNGILRLYEDFQDCFPPGFLPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g448 ### # start gene g449 Scaffold_6 AUGUSTUS gene 1937566 1938504 0.69 + . g449 Scaffold_6 AUGUSTUS transcript 1937566 1938504 0.69 + . g449.t1 Scaffold_6 AUGUSTUS start_codon 1937566 1937568 . + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_6 AUGUSTUS CDS 1937566 1938504 0.69 + 0 transcript_id "g449.t1"; gene_id "g449"; Scaffold_6 AUGUSTUS stop_codon 1938502 1938504 . + 0 transcript_id "g449.t1"; gene_id "g449"; # protein sequence = [MFSASTPSVALSLSQLHKIPDRISSNSNGQNAVFTDGCSTISPALARKVARLVLRSASKIIPSCFQFRLGGAKGVVFQ # DPFLNDEVLCIRPSQTKFESTDLNLDITLTSAHPLALFLNRPLIALLEHHGVPEHNFIKLQDLAIRDTQRIRSSLTEAATTFAQHGLGSSFQLESLFK # NIAQILHLEIAQHASERNSSTAQLVILKIAVAHGITHILREIKHRGRIRVPGSYTLLGVSDEWDCLEEGEIFAQVYDPRTQKLTPIEGRVLITRSPQI # HPGDCQFVEAVRRKELDHLKNVVVFSCKWVKIINKPTA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g449 ### # start gene g450 Scaffold_6 AUGUSTUS gene 1938869 1939573 0.99 + . g450 Scaffold_6 AUGUSTUS transcript 1938869 1939573 0.99 + . g450.t1 Scaffold_6 AUGUSTUS start_codon 1938869 1938871 . + 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_6 AUGUSTUS CDS 1938869 1939573 0.99 + 0 transcript_id "g450.t1"; gene_id "g450"; Scaffold_6 AUGUSTUS stop_codon 1939571 1939573 . + 0 transcript_id "g450.t1"; gene_id "g450"; # protein sequence = [MYTIIIDRHLKIKSDLVGYISTTHLRISDVNGLDCPDCLRLAKAASHAVDFPKVGTAVDFKTLPKAPEGPRPDYLSGE # GYRPKPGDNRYYPSVKVLGQLFRRVPTDEYEVEMEDYDDPIEFMKIDNAMGLAARRCLRKLQMGRFGAFSATLEMNPDEDLIDEMHHVFEDYREQLIV # IAKTHTASKKANTWLSEEELISGAIMERYPDPKRRREVTTAMNLQVIIFPFHLDDSSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g450 ### # start gene g451 Scaffold_6 AUGUSTUS gene 1945738 1947194 0.57 + . g451 Scaffold_6 AUGUSTUS transcript 1945738 1947194 0.57 + . g451.t1 Scaffold_6 AUGUSTUS start_codon 1945738 1945740 . + 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_6 AUGUSTUS CDS 1945738 1946317 0.71 + 0 transcript_id "g451.t1"; gene_id "g451"; Scaffold_6 AUGUSTUS CDS 1946385 1946720 0.76 + 2 transcript_id "g451.t1"; gene_id "g451"; Scaffold_6 AUGUSTUS CDS 1946899 1947194 0.75 + 2 transcript_id "g451.t1"; gene_id "g451"; Scaffold_6 AUGUSTUS stop_codon 1947192 1947194 . + 0 transcript_id "g451.t1"; gene_id "g451"; # protein sequence = [MVIRFRPGKLGEKPDSITRRWDVYPKEGDIGYAQVNPHNFRPIFTNEQLTASLRATFLEGPLRASIIMDIEALHQAII # LALPADPSSVVGLELAKDPSNERWSLGSDKLLRLDDRIYVLITAIFAFKSSATSMIIHFPAISAEEPQLSKLYVVNTPGPRSETLFVTTLPLALSVVA # ISPAVTALRLVETSAGSAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKALSMELHYTSGYHPEADG # QTERVNQTLEQYIRIYCSYQQDDWSPYFRSPTQSRYKEQADRKRISHPEFPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDY # FAEFTGFPRLTAGAGYAESFPESYSISSTSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g451 ### # start gene g452 Scaffold_6 AUGUSTUS gene 1953134 1953529 0.67 - . g452 Scaffold_6 AUGUSTUS transcript 1953134 1953529 0.67 - . g452.t1 Scaffold_6 AUGUSTUS stop_codon 1953134 1953136 . - 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_6 AUGUSTUS CDS 1953134 1953529 0.67 - 0 transcript_id "g452.t1"; gene_id "g452"; Scaffold_6 AUGUSTUS start_codon 1953527 1953529 . - 0 transcript_id "g452.t1"; gene_id "g452"; # protein sequence = [MTANQRLATAMIRYDAEVKGIEEKNEQTLKEWEASVQEWEKERDIARTERRKPAWTKPSKPTYTSGALVKPPAKPKLA # DFLSAQRIAPSGNQRNAIRYTEDGCGSESDKGSDSEDDDDEDEGEDEGGGSDA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g452 ### # start gene g453 Scaffold_6 AUGUSTUS gene 1957622 1958360 0.42 + . g453 Scaffold_6 AUGUSTUS transcript 1957622 1958360 0.42 + . g453.t1 Scaffold_6 AUGUSTUS start_codon 1957622 1957624 . + 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_6 AUGUSTUS CDS 1957622 1958196 0.59 + 0 transcript_id "g453.t1"; gene_id "g453"; Scaffold_6 AUGUSTUS CDS 1958318 1958360 0.64 + 1 transcript_id "g453.t1"; gene_id "g453"; Scaffold_6 AUGUSTUS stop_codon 1958358 1958360 . + 0 transcript_id "g453.t1"; gene_id "g453"; # protein sequence = [MWGWAMYGSEQDTENHNVGGEEIEGNDGKEAVHIPHNHISAPNPLDVLTSAALSAENPEQAFARLKSDSQETEEEEEK # LIDVSEVKGVTVPADGDIDMADLVTINRSTVVANGIASPRASTPDSIASSRPSPPNNVPQVAYVSTSRIPAGASTTEDEDDNTDIEENEIEPDEQHKS # ILTAKSRSKPNLRIDADEFEGEGFSWWSR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g453 ### # start gene g454 Scaffold_6 AUGUSTUS gene 1958633 1959157 0.54 + . g454 Scaffold_6 AUGUSTUS transcript 1958633 1959157 0.54 + . g454.t1 Scaffold_6 AUGUSTUS start_codon 1958633 1958635 . + 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_6 AUGUSTUS CDS 1958633 1959157 0.54 + 0 transcript_id "g454.t1"; gene_id "g454"; Scaffold_6 AUGUSTUS stop_codon 1959155 1959157 . + 0 transcript_id "g454.t1"; gene_id "g454"; # protein sequence = [MLDPDPDPSDKSDAEPEPDVEVDVEPDVDAPSDVSDGEDEKEDDDDEGEGEDEKDDADELEVDEVQDDDKEDDDKDDE # DKDDEDKEVSDKEDVEKDIDDDDRSEINLEDEEEESDLQPAHRVEALDMLAIVELKFALLKREIVYREDGRISLGRILGSKWYAITFRPVLRSHIL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g454 ### # start gene g455 Scaffold_6 AUGUSTUS gene 1959810 1960646 0.51 + . g455 Scaffold_6 AUGUSTUS transcript 1959810 1960646 0.51 + . g455.t1 Scaffold_6 AUGUSTUS start_codon 1959810 1959812 . + 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_6 AUGUSTUS CDS 1959810 1960646 0.51 + 0 transcript_id "g455.t1"; gene_id "g455"; Scaffold_6 AUGUSTUS stop_codon 1960644 1960646 . + 0 transcript_id "g455.t1"; gene_id "g455"; # protein sequence = [MTGARRSGPGSTQTNTMGMGMNMSVGNNGLNMDMNINLPIYEQGVHGPPVGLGHVYTPGSGTYNVSNPMRERLGPGSS # SLSHVPGPARRIVSGPGTLSGSSLSSQSTVGMGHVHEPPFVVGGLPPPMGSGGGSESLLPSFGPSRSMGGVGPRSGSTAGLRSGSAGGGVDREREIRS # VPSGSGGSGGRSSFHNGQSQHLFSDPSTTTNGAFPESEHQRDGDVVVPSSASSSVHGIHGRQVSSSTHFGPPGPGIGGGGPLLHRVHGKDQYHPSDPV # LASD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g455 ### # start gene g456 Scaffold_6 AUGUSTUS gene 1960673 1961563 0.59 + . g456 Scaffold_6 AUGUSTUS transcript 1960673 1961563 0.59 + . g456.t1 Scaffold_6 AUGUSTUS start_codon 1960673 1960675 . + 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_6 AUGUSTUS CDS 1960673 1961563 0.59 + 0 transcript_id "g456.t1"; gene_id "g456"; Scaffold_6 AUGUSTUS stop_codon 1961561 1961563 . + 0 transcript_id "g456.t1"; gene_id "g456"; # protein sequence = [MGPGMGMGGFGTGHRWEAEEHERELERTEHTDAGDIRGQERDRDRERDRDRDRERDQHIAHQHRHIQQEQQHARPQSA # GALNTPSHVHSYPDQAPHHHHHVRPHHHHIVHHHGPSSVGNNTSLTVVRGPSVSPRMRRGEMLLERERENGNRPPRTIVHRHPPTEVVNLTSSKLTPV # GHSTSQFSSNRIPDDSPLEYHERQRDGRRMNGGRPSSGSGQRLLDERERERDRDNRDRIVTGIKLAPCHSYQSQLPSTNQRYCDLLVCIVFSSPSWNT # IDRDDPYRPSSSISHTNLVIDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g456 ### # start gene g457 Scaffold_6 AUGUSTUS gene 1966353 1968503 0.51 + . g457 Scaffold_6 AUGUSTUS transcript 1966353 1968503 0.51 + . g457.t1 Scaffold_6 AUGUSTUS start_codon 1966353 1966355 . + 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_6 AUGUSTUS CDS 1966353 1967224 0.51 + 0 transcript_id "g457.t1"; gene_id "g457"; Scaffold_6 AUGUSTUS CDS 1967300 1968503 0.82 + 1 transcript_id "g457.t1"; gene_id "g457"; Scaffold_6 AUGUSTUS stop_codon 1968501 1968503 . + 0 transcript_id "g457.t1"; gene_id "g457"; # protein sequence = [MPNLLSTAELCASCLLLLRRLTPPCTSLPPLPPLNPPTSALFAGPEWESWLEHDLDQPKADIRLREATLLSLASISLF # SNDIRRALAEDEDETQSIDSNDTSQLHSSPSSSHQSQSSLSLILAALLSPHTSLRCAACHVVRALTRSVAVIRTNFVDSGLGWIVFAAFMGWPQARPR # TALGTSGSEEEDIRVVASALRAVCNAVCEFSPLKSIYIEHGLLPRLAEFIHSDHLDADFDYPDAESDVDTEDSLRFNSLWAVKNLVRKSGPATKRQVI # SVLGWHRQKSTAYPETALLSSHSAKILEQVLNILRNLAEDEDGISIVFNELDIRNPFNFPTSPSPTSSTGFLLLSRLTSILNQTSSPSHSSHPGSLSH # SPYSSSQDVLIQSTSLLANLVNSSDVNHHRMILTCPGMAHALRRVLAEQGPEVRRPVIRIVLEMVKVDLSASVTSAAAIAEELGPLKDGEESGTNTSA # IQEGNDEEASGADTMEIGYGTTPFGSSVITDISLNPSSAGAGRTRGHSRNQGLTGARKILSDAGFVGTLRRIVDQHHYHPSLTHPHSHGHPPHPHASV # AAASSGLGHTGSGIGAHSHPHAHAYGNFGLSSPNSVLLDSPGIGVGARAGGASVGSLIVGNGIVGNAGREDREDLETARTALDWLERGDMYMYVNSYA # RSTSRSGGGTGSSVSTGDSADVSDH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g457 ### # start gene g458 Scaffold_6 AUGUSTUS gene 1970893 1971381 0.72 + . g458 Scaffold_6 AUGUSTUS transcript 1970893 1971381 0.72 + . g458.t1 Scaffold_6 AUGUSTUS start_codon 1970893 1970895 . + 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_6 AUGUSTUS CDS 1970893 1971381 0.72 + 0 transcript_id "g458.t1"; gene_id "g458"; Scaffold_6 AUGUSTUS stop_codon 1971379 1971381 . + 0 transcript_id "g458.t1"; gene_id "g458"; # protein sequence = [MEKTTQKTNNHSPSKLHNQQTCLPTRLLQSPGKLCSTQSSMISTPYTDFYSKANGQYNSMMGTAKEAFGNAIGGDSWT # QAGKEQHVQGEAEYNAAQAKEYANGTIDRAGGKIDSVMGAVTGDKQQQMAGKDVHSSQSIIVLNTNSGNVRHDKGRVQQEANQP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g458 ### # start gene g459 Scaffold_6 AUGUSTUS gene 1973808 1974152 0.63 - . g459 Scaffold_6 AUGUSTUS transcript 1973808 1974152 0.63 - . g459.t1 Scaffold_6 AUGUSTUS stop_codon 1973808 1973810 . - 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_6 AUGUSTUS CDS 1973808 1974152 0.63 - 0 transcript_id "g459.t1"; gene_id "g459"; Scaffold_6 AUGUSTUS start_codon 1974150 1974152 . - 0 transcript_id "g459.t1"; gene_id "g459"; # protein sequence = [MFTTSLVDGVLTYSDSPLLRAIRFGRVMVVDEADKAPEHVVAVFRSLAGRGELTLSDGRRVRKKGKPGEKEQNEDGRD # DIIVHKDFRLVLLANRPGYRKLLFSTSISFANIMNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g459 ### # start gene g460 Scaffold_6 AUGUSTUS gene 1974421 1975323 0.75 - . g460 Scaffold_6 AUGUSTUS transcript 1974421 1975323 0.75 - . g460.t1 Scaffold_6 AUGUSTUS stop_codon 1974421 1974423 . - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_6 AUGUSTUS CDS 1974421 1975323 0.75 - 0 transcript_id "g460.t1"; gene_id "g460"; Scaffold_6 AUGUSTUS start_codon 1975321 1975323 . - 0 transcript_id "g460.t1"; gene_id "g460"; # protein sequence = [MRRRVLSDRNNTTNSSSTRTTWEPSPLIRGAWSGKLVWLEGIDVITGTGAAGSLSRFVQDREIELWEGRRIVAKKEEE # EAADLLTTAHPSFRLFVTASKSLQLRDWLSDEHANMFFTIPSRPMSSSEERTVLVNTGCDPAVVDLLLTFAEKYRQRMDIRVSSANVGNGHNSSSAVQ # RNRKLGTRTLIRISKRLALFPQEASQETLRKIFDHALLSEFLPTTERMVLNGLLEEVGLGSANFEEDNSYSRPPFIDSDAQPAALIFPRPVVLSQAIP # PSLYQPLLPPQYLFLILLEILLDPCH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g460 ### # start gene g461 Scaffold_6 AUGUSTUS gene 1985148 1985810 0.57 - . g461 Scaffold_6 AUGUSTUS transcript 1985148 1985810 0.57 - . g461.t1 Scaffold_6 AUGUSTUS stop_codon 1985148 1985150 . - 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_6 AUGUSTUS CDS 1985148 1985810 0.57 - 0 transcript_id "g461.t1"; gene_id "g461"; Scaffold_6 AUGUSTUS start_codon 1985808 1985810 . - 0 transcript_id "g461.t1"; gene_id "g461"; # protein sequence = [MANIAVRFPSGELLLLPFYVTHLDSSCKAVLGYSFLSRYNPLIDWASRNITFRNTSHLDSPQTSVPSAINPLCKGRCS # ATGTFAVGFTDNSGDPSWGLTSLSLSLPLSDFTGQAPFVQIPFEPIYSYPTVSQFAAQLETPEVDIALVSAAVFNRACKDAGMEPILLRAIHSEVAAR # AADRSSTTPTVPPLHPSIPEEYASLQTSSTRLLQIHFLNTDLTT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g461 ### # start gene g462 Scaffold_6 AUGUSTUS gene 1997117 1997821 0.45 + . g462 Scaffold_6 AUGUSTUS transcript 1997117 1997821 0.45 + . g462.t1 Scaffold_6 AUGUSTUS start_codon 1997117 1997119 . + 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_6 AUGUSTUS CDS 1997117 1997324 0.56 + 0 transcript_id "g462.t1"; gene_id "g462"; Scaffold_6 AUGUSTUS CDS 1997385 1997821 0.69 + 2 transcript_id "g462.t1"; gene_id "g462"; Scaffold_6 AUGUSTUS stop_codon 1997819 1997821 . + 0 transcript_id "g462.t1"; gene_id "g462"; # protein sequence = [MMRLAPSKELDVFAPLRGKGSPGASKAVSPPKVSDVISPPPVTKAQAVPPRALRRNREIESLKADASSFLASPRSTHS # KDSDNELLSGFPLVDEAPRASSSAKVSVGRKEPKSKTTVKVVEDPKADHPPLAGMAYKRVRLPPRSRKNTSIASKGKARQIVVTDEDSTSNEVESEDE # DEDEDTAPPPKRLKTTSSISGKIFILHFLSHFINSIRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g462 ### # start gene g463 Scaffold_6 AUGUSTUS gene 1998419 1998975 0.38 + . g463 Scaffold_6 AUGUSTUS transcript 1998419 1998975 0.38 + . g463.t1 Scaffold_6 AUGUSTUS start_codon 1998419 1998421 . + 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_6 AUGUSTUS CDS 1998419 1998467 0.39 + 0 transcript_id "g463.t1"; gene_id "g463"; Scaffold_6 AUGUSTUS CDS 1998530 1998975 0.68 + 2 transcript_id "g463.t1"; gene_id "g463"; Scaffold_6 AUGUSTUS stop_codon 1998973 1998975 . + 0 transcript_id "g463.t1"; gene_id "g463"; # protein sequence = [MDALNALHKASTSSTHNLANSLRRATDLNDQLKQIGSLFDTARELFLRSILDLQNAGEDPIVVLEALKTAEPNRRAIT # LNEWTLMATLFRWPSPFNLSGLDFDNRTPGEWIELLRSIQSGESTVHIDEHGHLVEASPPPDSATEALEGLKESRGGLRTRGPAVQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g463 ### # start gene g464 Scaffold_6 AUGUSTUS gene 2000082 2001526 0.26 + . g464 Scaffold_6 AUGUSTUS transcript 2000082 2001526 0.26 + . g464.t1 Scaffold_6 AUGUSTUS start_codon 2000082 2000084 . + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS CDS 2000082 2000249 0.72 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS CDS 2000308 2000328 0.38 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS CDS 2000887 2001019 0.58 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS CDS 2001101 2001252 0.71 + 2 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS CDS 2001332 2001526 0.68 + 0 transcript_id "g464.t1"; gene_id "g464"; Scaffold_6 AUGUSTUS stop_codon 2001524 2001526 . + 0 transcript_id "g464.t1"; gene_id "g464"; # protein sequence = [MPIHHKKDLDIARVAEPHLGALQQLLASYKGKKTNNPDKATISVLRRSTEYLHDLLEKPVTFVNRRSTPYPTGPNKGS # NKDEKSAVNEVSPRLSKVHCHTDSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLIWLRLFCSDASFATAQSI # PTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g464 ### # start gene g465 Scaffold_6 AUGUSTUS gene 2001932 2004252 0.41 - . g465 Scaffold_6 AUGUSTUS transcript 2001932 2004252 0.41 - . g465.t1 Scaffold_6 AUGUSTUS stop_codon 2001932 2001934 . - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_6 AUGUSTUS CDS 2001932 2003327 0.54 - 1 transcript_id "g465.t1"; gene_id "g465"; Scaffold_6 AUGUSTUS CDS 2003366 2004252 0.5 - 0 transcript_id "g465.t1"; gene_id "g465"; Scaffold_6 AUGUSTUS start_codon 2004250 2004252 . - 0 transcript_id "g465.t1"; gene_id "g465"; # protein sequence = [MPEEHIAQVVLEWPPCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCRRLTVETDASYIKGMLDNPSCGP # NATINRWIEHVRNYHFTLIHVKGATHGPDGLSRITPGGWQTKRPEVNPEDYVDEDGGEPINFIMGDGETEEPYQFDNFKDQIDPRSGYLYETAQEADD # IELDVQEALDEERSYEIRRNHMNLFPTFDEEFVQNNPYPEAHRSSEGNRLDELIPLIEKYLSNPSDESLGEMSKDERIKFIRLIKKFQVDDQGRLYHR # NTDQPDQPQLVVEKEKRMHMLNSAHDCLGHKGVFATNDFLQKRFWWPDIYKDVEWYVRSCKECQNRQMRLLKAPPTLMHTPSLFQKVHVDTMIMSIPS # NGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEKYGIKGIRISAYNSQANGKIERAHLDIRQALIK # ATGGDVSKWFYFLKMILWADRVTPRRGLGCSPYFLVTGAEPLLPFDIVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRR # FERKYRHTIKDWDFKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRLRVALISLLKWMEQYSKRRSEPSEYCRISREMNQLNCQTIFTNLST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g465 ### # start gene g466 Scaffold_6 AUGUSTUS gene 2004958 2006641 0.27 + . g466 Scaffold_6 AUGUSTUS transcript 2004958 2006641 0.27 + . g466.t1 Scaffold_6 AUGUSTUS start_codon 2004958 2004960 . + 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_6 AUGUSTUS CDS 2004958 2005250 0.62 + 0 transcript_id "g466.t1"; gene_id "g466"; Scaffold_6 AUGUSTUS CDS 2005291 2005718 0.45 + 1 transcript_id "g466.t1"; gene_id "g466"; Scaffold_6 AUGUSTUS CDS 2006313 2006641 0.83 + 2 transcript_id "g466.t1"; gene_id "g466"; Scaffold_6 AUGUSTUS stop_codon 2006639 2006641 . + 0 transcript_id "g466.t1"; gene_id "g466"; # protein sequence = [MPPKTRAQSRANSEENTFFTTAQSFAPFSDSISAIGQPRRRNRGFGPATVPTTSTLPEAMEEEQQFEYSTLYTGDGQP # VQVLTPRRGQPPVVAPARGRPPYGKQPQRRAASESPRDPPPHFDLDTGDHDDQDPPVDPDDPGADNNMTIWMTIPAVYRVVSLVTPVDLVVLVVPAVP # AVLVDLVDLVLPSPDIPNEQRAMLELLSGFKGSIETLGTVLAALGRPSDSSESKSKVKEPEVFDASGSSAPFTPKPKPFSGGKPNNNGKPQNSSNSGQ # SGGQRPAFNHLGADGKVLPSEKERRMKNNLCLFCGGKHQIADCNKRKARESKGRAAEVEETPEATVEVVEEESEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g466 ### # start gene g467 Scaffold_6 AUGUSTUS gene 2009451 2010502 0.7 + . g467 Scaffold_6 AUGUSTUS transcript 2009451 2010502 0.7 + . g467.t1 Scaffold_6 AUGUSTUS start_codon 2009451 2009453 . + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_6 AUGUSTUS CDS 2009451 2009747 0.7 + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_6 AUGUSTUS CDS 2009831 2010502 0.78 + 0 transcript_id "g467.t1"; gene_id "g467"; Scaffold_6 AUGUSTUS stop_codon 2010500 2010502 . + 0 transcript_id "g467.t1"; gene_id "g467"; # protein sequence = [MDFIEQLPMSNGYTAILVVVDRSSKQAIFIPTHDTITSEQLAELFVIHVFSKHGVPNHVTSDRGSEFVSAFFRALGKA # LSMELHYTSGYHPEADGQTERFAYNNAPNASTGITPFFANKGYHPNITVRPEVDMKSDLARDFVVNLDELHVFLREEILLAQSRYKEQADRKRISHPE # FPIGSEVFVLAKHIRSTRPTEKFSEKYLGPFKVISRPGTLSYELKLPDYLRRIHPVFHVSQLEPVTPNPFPNRTQSPPPPIEVDGEEEYNVAEILDSK # LDRRYKRCPLRYYIRWAGYEGTDDEFSGLLLMNYMLTNWYPHSTLDTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g467 ### # start gene g468 Scaffold_6 AUGUSTUS gene 2013070 2013720 0.55 - . g468 Scaffold_6 AUGUSTUS transcript 2013070 2013720 0.55 - . g468.t1 Scaffold_6 AUGUSTUS stop_codon 2013070 2013072 . - 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_6 AUGUSTUS CDS 2013070 2013720 0.55 - 0 transcript_id "g468.t1"; gene_id "g468"; Scaffold_6 AUGUSTUS start_codon 2013718 2013720 . - 0 transcript_id "g468.t1"; gene_id "g468"; # protein sequence = [MNFELKDTFMVIRYWNYLNCRKHPKPFAPTGRYTEERKEIIDKNHPEGFLWERERDLMHEMMCKQEAGFAWEPSEAGT # FKNEFFPPVKVPVIPHEPWVERNIPIPPGIFEDVCKIIKSKIDSGIYEPSNASYRSKWFCVIKKDGKSLRLVHSLEPLNKVTIQHSGVPPATADLARS # FSGRSCGGTLDLYVGYDEQELDQLSREHDDVSKRRMDHIG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g468 ### # start gene g469 Scaffold_6 AUGUSTUS gene 2014994 2015887 0.83 - . g469 Scaffold_6 AUGUSTUS transcript 2014994 2015887 0.83 - . g469.t1 Scaffold_6 AUGUSTUS stop_codon 2014994 2014996 . - 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_6 AUGUSTUS CDS 2014994 2015887 0.83 - 0 transcript_id "g469.t1"; gene_id "g469"; Scaffold_6 AUGUSTUS start_codon 2015885 2015887 . - 0 transcript_id "g469.t1"; gene_id "g469"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIDLWQDQADMFEVLTESRNDIPVGSIVQKDIVESFLRDLSIDD # ERRNIAIVANQAWHMKTIVIIQW] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g469 ### # start gene g470 Scaffold_6 AUGUSTUS gene 2015917 2016465 0.52 - . g470 Scaffold_6 AUGUSTUS transcript 2015917 2016465 0.52 - . g470.t1 Scaffold_6 AUGUSTUS stop_codon 2015917 2015919 . - 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_6 AUGUSTUS CDS 2015917 2016465 0.52 - 0 transcript_id "g470.t1"; gene_id "g470"; Scaffold_6 AUGUSTUS start_codon 2016463 2016465 . - 0 transcript_id "g470.t1"; gene_id "g470"; # protein sequence = [MTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTDHFMNECPHLLEFTKRGWMMP # EGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELSDRLGNLEAHREDDVRVFNQD # SSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g470 ### # start gene g471 Scaffold_6 AUGUSTUS gene 2016549 2018662 0.86 - . g471 Scaffold_6 AUGUSTUS transcript 2016549 2018662 0.86 - . g471.t1 Scaffold_6 AUGUSTUS stop_codon 2016549 2016551 . - 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_6 AUGUSTUS CDS 2016549 2017884 0.92 - 1 transcript_id "g471.t1"; gene_id "g471"; Scaffold_6 AUGUSTUS CDS 2018646 2018662 0.89 - 0 transcript_id "g471.t1"; gene_id "g471"; Scaffold_6 AUGUSTUS start_codon 2018660 2018662 . - 0 transcript_id "g471.t1"; gene_id "g471"; # protein sequence = [MRLYILKTAYFEEFGESRSLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGVLETVVKDVSVTSMSDRRKEDPFKIDEVMNAAEKYMIGSSFD # NYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIPRELTENNSKWLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g471 ### # start gene g472 Scaffold_6 AUGUSTUS gene 2032627 2033028 0.9 - . g472 Scaffold_6 AUGUSTUS transcript 2032627 2033028 0.9 - . g472.t1 Scaffold_6 AUGUSTUS stop_codon 2032627 2032629 . - 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_6 AUGUSTUS CDS 2032627 2033028 0.9 - 0 transcript_id "g472.t1"; gene_id "g472"; Scaffold_6 AUGUSTUS start_codon 2033026 2033028 . - 0 transcript_id "g472.t1"; gene_id "g472"; # protein sequence = [MLHECDEHIVPPKEDEKKEGDKEKKEGEEKKDGEEKKEEPSKQDDAFQTFAVIAIALISMGEEIGSQMSMRQFNHLVS # SFKIFLQRSVFSHPQRRCIMVNPTYGKQYLLPSALLMLQIPTTNPRNTFEVQSRQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g472 ### # start gene g473 Scaffold_6 AUGUSTUS gene 2035198 2035374 0.97 - . g473 Scaffold_6 AUGUSTUS transcript 2035198 2035374 0.97 - . g473.t1 Scaffold_6 AUGUSTUS stop_codon 2035198 2035200 . - 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_6 AUGUSTUS CDS 2035198 2035374 0.97 - 0 transcript_id "g473.t1"; gene_id "g473"; Scaffold_6 AUGUSTUS start_codon 2035372 2035374 . - 0 transcript_id "g473.t1"; gene_id "g473"; # protein sequence = [MSDPAKFAIPVPSKDPASKKPDQTDKEEGTSKLEVKKDEEKDGDELVLYFPKSELEGY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g473 ### # start gene g474 Scaffold_6 AUGUSTUS gene 2040846 2041566 0.32 + . g474 Scaffold_6 AUGUSTUS transcript 2040846 2041566 0.32 + . g474.t1 Scaffold_6 AUGUSTUS start_codon 2040846 2040848 . + 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_6 AUGUSTUS CDS 2040846 2040902 0.58 + 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_6 AUGUSTUS CDS 2040997 2041566 0.45 + 0 transcript_id "g474.t1"; gene_id "g474"; Scaffold_6 AUGUSTUS stop_codon 2041564 2041566 . + 0 transcript_id "g474.t1"; gene_id "g474"; # protein sequence = [MSNPTPAPTTLLPIFMASRDRYKSERIDIAVSYMQGPKVSSWVQNYTDDNFNDDEEEWKVTWKGFKDALNASFLDKGL # TENAQEKLEHLRQGPNERAEDFFKEFEVIMQDAGYAKDAPYVVRLIETNVKPKLIDQVYGTVMRIEKFDELKQKIININDIWWRVRKCGEIGQADTSG # MLGKDLVARDGNTKHRLRPLRYPPRIGKTVLE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g474 ### # start gene g475 Scaffold_6 AUGUSTUS gene 2042393 2042707 1 + . g475 Scaffold_6 AUGUSTUS transcript 2042393 2042707 1 + . g475.t1 Scaffold_6 AUGUSTUS start_codon 2042393 2042395 . + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_6 AUGUSTUS CDS 2042393 2042707 1 + 0 transcript_id "g475.t1"; gene_id "g475"; Scaffold_6 AUGUSTUS stop_codon 2042705 2042707 . + 0 transcript_id "g475.t1"; gene_id "g475"; # protein sequence = [MAVTNLGKTDIFLGIDWLRYHNPSIDWKESTLTFERCPDKCGYLPHYESPEDDGTEEKLSMVKGSSGSIGMDLSDQGH # IKVQTTTDAAAPYLAEYADVFSKKGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g475 ### # start gene g476 Scaffold_6 AUGUSTUS gene 2046858 2047563 0.26 + . g476 Scaffold_6 AUGUSTUS transcript 2046858 2047563 0.26 + . g476.t1 Scaffold_6 AUGUSTUS start_codon 2046858 2046860 . + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_6 AUGUSTUS CDS 2046858 2047068 0.36 + 0 transcript_id "g476.t1"; gene_id "g476"; Scaffold_6 AUGUSTUS CDS 2047127 2047563 0.78 + 2 transcript_id "g476.t1"; gene_id "g476"; Scaffold_6 AUGUSTUS stop_codon 2047561 2047563 . + 0 transcript_id "g476.t1"; gene_id "g476"; # protein sequence = [MMRLAPSKDLDVFASLRGKVSPAVTSKITTPSPPLEIKPSTPAPKAPVAPPRLIRRNRELENLKTDASSFLASPRSAR # SKDSDNELLSGFPLVDAAPRASSSTKVPVGRKEPKSKTTVKVVEDSKAPDPSTSALVYKRVRLPPRSRKVAPAASKGKARQIVVTDEDSASNEVESED # EDEEEDSAPPPKRLKTTSSISGKVYSSFISFYFTNLMGL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g476 ### # start gene g477 Scaffold_6 AUGUSTUS gene 2048475 2048819 0.46 + . g477 Scaffold_6 AUGUSTUS transcript 2048475 2048819 0.46 + . g477.t1 Scaffold_6 AUGUSTUS start_codon 2048475 2048477 . + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_6 AUGUSTUS CDS 2048475 2048819 0.46 + 0 transcript_id "g477.t1"; gene_id "g477"; Scaffold_6 AUGUSTUS stop_codon 2048817 2048819 . + 0 transcript_id "g477.t1"; gene_id "g477"; # protein sequence = [MATLFRWPSPFNLSGLDFDNRTPGEWIDLLRSIHSGESTAHIDEHGHLVESSPPPDSATEALEGLKEVERGSADEGAS # SQVGGSIPMELDLPAIESLAEPALSPEKGAEPAQTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g477 ### # start gene g478 Scaffold_6 AUGUSTUS gene 2050727 2051293 0.96 + . g478 Scaffold_6 AUGUSTUS transcript 2050727 2051293 0.96 + . g478.t1 Scaffold_6 AUGUSTUS start_codon 2050727 2050729 . + 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_6 AUGUSTUS CDS 2050727 2050784 0.96 + 0 transcript_id "g478.t1"; gene_id "g478"; Scaffold_6 AUGUSTUS CDS 2050866 2051293 1 + 2 transcript_id "g478.t1"; gene_id "g478"; Scaffold_6 AUGUSTUS stop_codon 2051291 2051293 . + 0 transcript_id "g478.t1"; gene_id "g478"; # protein sequence = [MFLLVSARFIATDSHVSSNLTHSKHINHALAQVVSSNLDTPPAPLESQSTKFIAATLNFQAAEFEFNANLVKTYATRA # RIAKVIADEACSILKSRQDSGSDSSASDASFATAQSIPTTGSEDTIVTPTEIAVPVPKTVERATTPFTRGVTPMMEDKGHVSA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g478 ### # start gene g479 Scaffold_6 AUGUSTUS gene 2051552 2054015 0.06 - . g479 Scaffold_6 AUGUSTUS transcript 2051552 2054015 0.06 - . g479.t1 Scaffold_6 AUGUSTUS stop_codon 2051552 2051554 . - 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS CDS 2051552 2052135 0.77 - 2 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS CDS 2052270 2052667 0.33 - 1 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS CDS 2052806 2052833 0.26 - 2 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS CDS 2053086 2053421 0.86 - 2 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS CDS 2053559 2054015 0.21 - 0 transcript_id "g479.t1"; gene_id "g479"; Scaffold_6 AUGUSTUS start_codon 2054013 2054015 . - 0 transcript_id "g479.t1"; gene_id "g479"; # protein sequence = [MPEEHIAQVVLEWPPCRDKTEVRAFLGTASQLRMFIANFAKKAAPLTKLTSNVPFEWNEKCDKAMDELKDGIRDCPAL # RPINFDWDVYLAVDTSYKAVGWYIYQIDPTEKKKFFNYFGSMTLNEREARFSQSKRELYGLKLALEASYYHVYGCATHGPDGLSRITPGGWQTKRPEV # NPEDYVDEDGGEPINFIMGDGETEEPYQFDDFKDQIDPRSGYLYETAQEADDIELDVQEALDEERSYEIRRNHMLESKDAHVKSSVGILVEKEKRMHI # QMKLLKAPPTLMHTPSLFQKVHVDTMIMSIPSNGCKYIIHGRDSLSSWSEARAVKHENARTLGEWFFDDIICRWGCPEEVVTDNAGQMKNMLAWLEEK # YGIKGIRISAYNSQANGKIERAHLDIRQALIKATVESTWLVNPPNRILTRDELIGYRAQALSKHNSFIEKVRRRVDANKVAELRRFERKYRHTIKDWD # FKPGQLVQVRNSGIEKSLDRKMYPRYRGPMVVIRRTKGGSYIIAEMDGTVLKEKVGAFRVLPHFTRNEPIELPNNIHELIDLTAEQLDLMVEDEDEYW # MTPENDYIFDAIPHLRLSDTDSDEELSEGEDQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g479 ### # start gene g480 Scaffold_6 AUGUSTUS gene 2055083 2055558 0.59 - . g480 Scaffold_6 AUGUSTUS transcript 2055083 2055558 0.59 - . g480.t1 Scaffold_6 AUGUSTUS stop_codon 2055083 2055085 . - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_6 AUGUSTUS CDS 2055083 2055479 0.65 - 1 transcript_id "g480.t1"; gene_id "g480"; Scaffold_6 AUGUSTUS CDS 2055536 2055558 0.59 - 0 transcript_id "g480.t1"; gene_id "g480"; Scaffold_6 AUGUSTUS start_codon 2055556 2055558 . - 0 transcript_id "g480.t1"; gene_id "g480"; # protein sequence = [MEGSSLNPLGENCDKSESTETTQNQCNNENTSETIRDDNWNKPKNSQRTRKRMVRYEILKRGTESFQRSQPSFEKVRY # ESRQRKKGKAQDSKDKKENVQADVLNEPPTNKLEERIKLNQQDRSPINLIDETNKQVIMKP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g480 ### # start gene g481 Scaffold_6 AUGUSTUS gene 2056578 2057315 0.71 - . g481 Scaffold_6 AUGUSTUS transcript 2056578 2057315 0.71 - . g481.t1 Scaffold_6 AUGUSTUS stop_codon 2056578 2056580 . - 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_6 AUGUSTUS CDS 2056578 2057315 0.71 - 0 transcript_id "g481.t1"; gene_id "g481"; Scaffold_6 AUGUSTUS start_codon 2057313 2057315 . - 0 transcript_id "g481.t1"; gene_id "g481"; # protein sequence = [MRTLRSNAVAPEESEKAKRNQFNENTKRLVFDGVHIPKKPGLIPGKLVETTNGNQKTVRFEAPKSIDRPLKKPSVTIE # DVNESDDEDAIKLIPSSRPTNQINSEHRPYDHVQPRTYRPIQINTPTKVPRDQTNQIDSHGYTPAYKIRNEVSRPGVEEDIAKKIFDAKVDLSTEELA # ALSPAIRKIIMRKIRNRRVRPRTKTNNYVSTLSEDGETEILDDPSRVQMIDTCIRIEIFGRIRRICLKS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g481 ### # start gene g482 Scaffold_6 AUGUSTUS gene 2057345 2057953 0.65 - . g482 Scaffold_6 AUGUSTUS transcript 2057345 2057953 0.65 - . g482.t1 Scaffold_6 AUGUSTUS stop_codon 2057345 2057347 . - 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_6 AUGUSTUS CDS 2057345 2057953 0.65 - 0 transcript_id "g482.t1"; gene_id "g482"; Scaffold_6 AUGUSTUS start_codon 2057951 2057953 . - 0 transcript_id "g482.t1"; gene_id "g482"; # protein sequence = [MKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCKSTD # HFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIEELS # DRLGNLEAHREDDVRVFNQDSSNGKK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g482 ### # start gene g483 Scaffold_6 AUGUSTUS gene 2058007 2059029 0.91 - . g483 Scaffold_6 AUGUSTUS transcript 2058007 2059029 0.91 - . g483.t1 Scaffold_6 AUGUSTUS stop_codon 2058007 2058009 . - 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_6 AUGUSTUS CDS 2058007 2059029 0.91 - 0 transcript_id "g483.t1"; gene_id "g483"; Scaffold_6 AUGUSTUS start_codon 2059027 2059029 . - 0 transcript_id "g483.t1"; gene_id "g483"; # protein sequence = [MNAAEKYMIGSSFDNYYQTLSIASSSPPINNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESL # IPRELTEEQQQMVALNKDLMEANMKEIRAVKSLQSHFKEGADIMTQLTAVMAQMAKENAKGMINSIPPSGPSNQSNRFERNTTPRSSNGTQWACFLCK # STDHFMNECPHLLEFTKRGWMMPEGGDSKRYKLRDNARMPRDDPNVPRYKKIEQMAKDLGWDRAESYFANMEDDEDDKVMDQQMNPNVNLAVWMTRIE # ELSDRLGNLEAHRXNPNSFSRGHINLPFAADVPKTDRNYLQALKPKVEDEFKDLLGIKLESLIQGN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g483 ### # start gene g484 Scaffold_6 AUGUSTUS gene 2059063 2061104 0.32 - . g484 Scaffold_6 AUGUSTUS transcript 2059063 2061104 0.32 - . g484.t1 Scaffold_6 AUGUSTUS stop_codon 2059063 2059065 . - 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_6 AUGUSTUS CDS 2059063 2060087 0.6 - 2 transcript_id "g484.t1"; gene_id "g484"; Scaffold_6 AUGUSTUS CDS 2061089 2061104 0.46 - 0 transcript_id "g484.t1"; gene_id "g484"; Scaffold_6 AUGUSTUS start_codon 2061102 2061104 . - 0 transcript_id "g484.t1"; gene_id "g484"; # protein sequence = [MTNDRRKPRTSKNSEKAGVLTPEEYRKAGVVFGRSTFGTSARTSLLNPTNESSRPSSSQIPTEESRGSSVSRGTGSSI # SRGRLTSLPRNLKKSNLDPKRKRKEINPIDIEEDIIELIAPESISTSSTSIESTRLIDTLHQTISQTSNTIEPVKMTTNNYGMPALSAEAKAEIDKAS # AKLPRKYKTAPLFDITDPSQMIPWFEATESIFEHGGITSDEAKVRLALEWTSYKTRQALRVFDSVKKPNWDQFKKDLKNMFPQSVGDERGSRLLLEQL # VHQFNPIDAGEQEKMRIFRLLFDAEMKKLMDEPKMITNSDAVRLFLAPMTPEVRRGCARNSCERCISYFYVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g484 ### # command line: # augustus --species=saccharomyces split/input_1/input_1.fa_chunk_0000004