2022-05-08 14:44:56 : Started OrthoFinder version 2.5.4 Command Line: orthofinder -t 16 -f protein WorkingDirectory_Base: /yoshitake/test/Comparative-genomics~circos-plot-with-single-copy-gene/protein/OrthoFinder/Results_May08/WorkingDirectory/ Species used: 0: input_1.fa 1: input_2.fa FN_Orthogroups: /yoshitake/test/Comparative-genomics~circos-plot-with-single-copy-gene/protein/OrthoFinder/Results_May08/WorkingDirectory/clusters_OrthoFinder_I1.5.txt_id_pairs.txt WorkingDirectory_Trees: /yoshitake/test/Comparative-genomics~circos-plot-with-single-copy-gene/protein/OrthoFinder/Results_May08/WorkingDirectory/ 2022-05-08 14:52:29 : OrthoFinder run completed